Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
22:34:36 (2080599): wrapper (7.7.26015): starting
22:34:36 (2080599): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 22:34:36] Arguments: --nthreads 4
[2025-10-12 22:34:36] Threads: 4
[2025-10-12 22:34:36] Checking for CVMFS
[2025-10-12 22:34:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 22:34:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 22:34:36] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 22:34:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 22:34:36] 2.11.3.0 4671 10522 99812 151647 3 57 2342713 4194304 0 130560 0 4792514 99.984 428697 765 http://s1unl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.59.5:3128 1
[2025-10-12 22:34:36] CVMFS is ok
[2025-10-12 22:34:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 22:34:36] Checking for apptainer binary...
[2025-10-12 22:34:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 22:34:36] Running /usr/bin/apptainer --version
[2025-10-12 22:34:36] apptainer version 1.4.2-1.fc42
[2025-10-12 22:34:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 22:34:36] R7OwensSE
[2025-10-12 22:34:36] apptainer works
[2025-10-12 22:34:36] Set ATHENA_PROC_NUMBER=4
[2025-10-12 22:34:36] Set ATHENA_CORE_NUMBER=4
[2025-10-12 22:34:36] Starting ATLAS job with PandaID=6840181817
[2025-10-12 22:34:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/data/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 00:42:06]  *** The last 200 lines of the pilot log: ***
[2025-10-13 00:42:06] 2025-10-13 05:41:14,804 | INFO     | monitor loop #577: job 0:6840181817 is in state 'finished'
[2025-10-13 00:42:06] 2025-10-13 05:41:14,805 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 00:42:06] 2025-10-13 05:41:15,619 | INFO     | time since job start (7587s) is within the limit (172800.0s)
[2025-10-13 00:42:06] 2025-10-13 05:41:15,845 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 00:42:06] 2025-10-13 05:41:15,848 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3346.7366875000002
[2025-10-13 00:42:06] 2025-10-13 05:41:15,851 | INFO     | using path: /data/boinc/slots/1/PanDA_Pilot-6840181817/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 00:42:06] 2025-10-13 05:41:15,852 | INFO     | extracted standard info from prmon json
[2025-10-13 00:42:06] 2025-10-13 05:41:15,852 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 00:42:06] 2025-10-13 05:41:15,852 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 00:42:06] 2025-10-13 05:41:15,852 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 00:42:06] 2025-10-13 05:41:15,853 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 00:42:06] 2025-10-13 05:41:15,855 | INFO     | fitting pss+swap vs Time
[2025-10-13 00:42:06] 2025-10-13 05:41:15,855 | INFO     | sum of square deviations: 591173875.0
[2025-10-13 00:42:06] 2025-10-13 05:41:15,855 | INFO     | sum of deviations: -20398507573.500008
[2025-10-13 00:42:06] 2025-10-13 05:41:15,855 | INFO     | mean x: 1760330264.5
[2025-10-13 00:42:06] 2025-10-13 05:41:15,856 | INFO     | mean y: 2441375.4112903224
[2025-10-13 00:42:06] 2025-10-13 05:41:15,856 | INFO     | -- intersect: 60742795018.85422
[2025-10-13 00:42:06] 2025-10-13 05:41:15,856 | INFO     | intersect: 60742795018.85422
[2025-10-13 00:42:06] 2025-10-13 05:41:15,856 | INFO     | chi2: 1.5168629437442815
[2025-10-13 00:42:06] 2025-10-13 05:41:15,856 | INFO     | sum of square deviations: 522502820.0
[2025-10-13 00:42:06] 2025-10-13 05:41:15,857 | INFO     | sum of deviations: -19010802744.000004
[2025-10-13 00:42:06] 2025-10-13 05:41:15,857 | INFO     | mean x: 1760330112.0
[2025-10-13 00:42:06] 2025-10-13 05:41:15,857 | INFO     | mean y: 2444458.806722689
[2025-10-13 00:42:06] 2025-10-13 05:41:15,857 | INFO     | -- intersect: 64050497871.33268
[2025-10-13 00:42:06] 2025-10-13 05:41:15,857 | INFO     | intersect: 64050497871.33268
[2025-10-13 00:42:06] 2025-10-13 05:41:15,857 | INFO     | chi2: 1.5094546644398033
[2025-10-13 00:42:06] 2025-10-13 05:41:15,857 | INFO     | current chi2=1.5094546644398033 (change=0.4883947712633429 %)
[2025-10-13 00:42:06] 2025-10-13 05:41:15,857 | INFO     | right removable region: 118
[2025-10-13 00:42:06] 2025-10-13 05:41:15,858 | INFO     | sum of square deviations: 522502820.0
[2025-10-13 00:42:06] 2025-10-13 05:41:15,858 | INFO     | sum of deviations: -32173520543.00001
[2025-10-13 00:42:06] 2025-10-13 05:41:15,858 | INFO     | mean x: 1760330417.0
[2025-10-13 00:42:06] 2025-10-13 05:41:15,858 | INFO     | mean y: 2466670.100840336
[2025-10-13 00:42:06] 2025-10-13 05:41:15,858 | INFO     | -- intersect: 108396191384.95937
[2025-10-13 00:42:06] 2025-10-13 05:41:15,858 | INFO     | intersect: 108396191384.95937
[2025-10-13 00:42:06] 2025-10-13 05:41:15,859 | INFO     | chi2: 0.2803649561745114
[2025-10-13 00:42:06] 2025-10-13 05:41:15,859 | INFO     | current chi2=0.2803649561745114 (change=81.51679047004419 %)
[2025-10-13 00:42:06] 2025-10-13 05:41:15,859 | INFO     | sum of square deviations: 459366752.5
[2025-10-13 00:42:06] 2025-10-13 05:41:15,859 | INFO     | sum of deviations: -27134978218.499996
[2025-10-13 00:42:06] 2025-10-13 05:41:15,859 | INFO     | mean x: 1760330569.5
[2025-10-13 00:42:06] 2025-10-13 05:41:15,860 | INFO     | mean y: 2454486.956140351
[2025-10-13 00:42:06] 2025-10-13 05:41:15,860 | INFO     | -- intersect: 103985886898.6046
[2025-10-13 00:42:06] 2025-10-13 05:41:15,860 | INFO     | intersect: 103985886898.6046
[2025-10-13 00:42:06] 2025-10-13 05:41:15,860 | INFO     | chi2: 0.2766386113786499
[2025-10-13 00:42:06] 2025-10-13 05:41:15,860 | INFO     | current chi2=0.2766386113786499 (change=1.3291050517533443 %)
[2025-10-13 00:42:06] 2025-10-13 05:41:15,860 | INFO     | left removable region: 20
[2025-10-13 00:42:06] 2025-10-13 05:41:15,860 | INFO     | sum of square deviations: 291817564.5
[2025-10-13 00:42:06] 2025-10-13 05:41:15,861 | INFO     | sum of deviations: -15074577785.999998
[2025-10-13 00:42:06] 2025-10-13 05:41:15,861 | INFO     | mean x: 1760330691.5
[2025-10-13 00:42:06] 2025-10-13 05:41:15,861 | INFO     | mean y: 2427478.6326530613
[2025-10-13 00:42:06] 2025-10-13 05:41:15,861 | INFO     | -- intersect: 90936782247.74017
[2025-10-13 00:42:06] 2025-10-13 05:41:15,861 | INFO     | intersect: 90936782247.74017
[2025-10-13 00:42:06] 2025-10-13 05:41:15,861 | INFO     | chi2: 0.2332924483762087
[2025-10-13 00:42:06] 2025-10-13 05:41:15,861 | INFO     | -- intersect: 90936782247.74017
[2025-10-13 00:42:06] 2025-10-13 05:41:15,861 | INFO     | current memory leak: -51.66 B/s (using 98 data points, chi2=0.23)
[2025-10-13 00:42:06] 2025-10-13 05:41:15,862 | INFO     | could have reported an average CPU frequency of 3388 MHz (8 samples)
[2025-10-13 00:42:06] 2025-10-13 05:41:15,862 | INFO     | ..............................
[2025-10-13 00:42:06] 2025-10-13 05:41:15,862 | INFO     | . Timing measurements:
[2025-10-13 00:42:06] 2025-10-13 05:41:15,862 | INFO     | . get job = 0 s
[2025-10-13 00:42:06] 2025-10-13 05:41:15,862 | INFO     | . initial setup = 3 s
[2025-10-13 00:42:06] 2025-10-13 05:41:15,862 | INFO     | . payload setup = 5 s
[2025-10-13 00:42:06] 2025-10-13 05:41:15,862 | INFO     | . stage-in = 0 s
[2025-10-13 00:42:06] 2025-10-13 05:41:15,862 | INFO     | . payload execution = 7555 s
[2025-10-13 00:42:06] 2025-10-13 05:41:15,862 | INFO     | . stage-out = 0 s
[2025-10-13 00:42:06] 2025-10-13 05:41:15,862 | INFO     | . log creation = 0 s
[2025-10-13 00:42:06] 2025-10-13 05:41:15,862 | INFO     | ..............................
[2025-10-13 00:42:06] 2025-10-13 05:41:16,409 | INFO     | 
[2025-10-13 00:42:06] 2025-10-13 05:41:16,410 | INFO     | job summary report
[2025-10-13 00:42:06] 2025-10-13 05:41:16,410 | INFO     | --------------------------------------------------
[2025-10-13 00:42:06] 2025-10-13 05:41:16,410 | INFO     | PanDA job id: 6840181817
[2025-10-13 00:42:06] 2025-10-13 05:41:16,410 | INFO     | task id: 46676269
[2025-10-13 00:42:06] 2025-10-13 05:41:16,410 | INFO     | errors: (none)
[2025-10-13 00:42:06] 2025-10-13 05:41:16,410 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 00:42:06] 2025-10-13 05:41:16,410 | INFO     | pilot state: finished 
[2025-10-13 00:42:06] 2025-10-13 05:41:16,410 | INFO     | transexitcode: 0
[2025-10-13 00:42:06] 2025-10-13 05:41:16,410 | INFO     | exeerrorcode: 0
[2025-10-13 00:42:06] 2025-10-13 05:41:16,410 | INFO     | exeerrordiag: 
[2025-10-13 00:42:06] 2025-10-13 05:41:16,410 | INFO     | exitcode: 0
[2025-10-13 00:42:06] 2025-10-13 05:41:16,410 | INFO     | exitmsg: OK
[2025-10-13 00:42:06] 2025-10-13 05:41:16,411 | INFO     | cpuconsumptiontime: 29209 s
[2025-10-13 00:42:06] 2025-10-13 05:41:16,411 | INFO     | nevents: 400
[2025-10-13 00:42:06] 2025-10-13 05:41:16,411 | INFO     | neventsw: 0
[2025-10-13 00:42:06] 2025-10-13 05:41:16,411 | INFO     | pid: 2090950
[2025-10-13 00:42:06] 2025-10-13 05:41:16,411 | INFO     | pgrp: 2090950
[2025-10-13 00:42:06] 2025-10-13 05:41:16,411 | INFO     | corecount: 4
[2025-10-13 00:42:06] 2025-10-13 05:41:16,411 | INFO     | event service: False
[2025-10-13 00:42:06] 2025-10-13 05:41:16,411 | INFO     | sizes: {0: 2348029, 1: 2348882, 5: 2349144, 12: 2349200, 7565: 2376880, 7567: 2386056, 7573: 2386194}
[2025-10-13 00:42:06] 2025-10-13 05:41:16,411 | INFO     | --------------------------------------------------
[2025-10-13 00:42:06] 2025-10-13 05:41:16,411 | INFO     | 
[2025-10-13 00:42:06] 2025-10-13 05:41:16,411 | INFO     | executing command: ls -lF /data/boinc/slots/1
[2025-10-13 00:42:06] 2025-10-13 05:41:16,438 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 00:42:06] 2025-10-13 05:41:16,438 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 00:42:06] 2025-10-13 05:41:16,438 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 00:42:06] 2025-10-13 05:41:16,438 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 00:42:06] 2025-10-13 05:41:16,438 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 00:42:06] 2025-10-13 05:41:16,438 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 00:42:06] 2025-10-13 05:41:16,438 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 00:42:06] 2025-10-13 05:41:16,438 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 00:42:06] 2025-10-13 05:41:16,438 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 00:42:06] 2025-10-13 05:41:16,438 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 00:42:06] 2025-10-13 05:41:16,438 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 00:42:06] 2025-10-13 05:41:16,438 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 00:42:06] 2025-10-13 05:41:16,438 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 00:42:06] 2025-10-13 05:41:16,438 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 00:42:06] 2025-10-13 05:41:16,439 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 00:42:06] 2025-10-13 05:41:16,439 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 00:42:06] 2025-10-13 05:41:16,439 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 00:42:06] 2025-10-13 05:41:16,439 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 00:42:06] 2025-10-13 05:41:16,439 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 00:42:06] 2025-10-13 05:41:16,439 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 00:42:06] 2025-10-13 05:41:16,439 | INFO     | job 6840181817 has completed (purged errors)
[2025-10-13 00:42:06] 2025-10-13 05:41:16,439 | INFO     | overall cleanup function is called
[2025-10-13 00:42:06] 2025-10-13 05:41:17,446 | INFO     | --- collectZombieJob: --- 10, [2090950]
[2025-10-13 00:42:06] 2025-10-13 05:41:17,446 | INFO     | zombie collector waiting for pid 2090950
[2025-10-13 00:42:06] 2025-10-13 05:41:17,447 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 00:42:06] 2025-10-13 05:41:17,447 | INFO     | collected zombie processes
[2025-10-13 00:42:06] 2025-10-13 05:41:17,447 | INFO     | will attempt to kill all subprocesses of pid=2090950
[2025-10-13 00:42:06] 2025-10-13 05:41:17,535 | INFO     | process IDs to be killed: [2090950] (in reverse order)
[2025-10-13 00:42:06] 2025-10-13 05:41:17,585 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 00:42:06] 2025-10-13 05:41:17,585 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 00:42:06] 2025-10-13 05:41:17,588 | INFO     | did not find any defunct processes belonging to 2090950
[2025-10-13 00:42:06] 2025-10-13 05:41:17,591 | INFO     | did not find any defunct processes belonging to 2090950
[2025-10-13 00:42:06] 2025-10-13 05:41:17,591 | INFO     | ready for new job
[2025-10-13 00:42:06] 2025-10-13 05:41:17,591 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 00:42:06] 2025-10-13 05:41:17,592 | INFO     | ***************************************
[2025-10-13 00:42:06] 2025-10-13 05:41:17,592 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 00:42:06] 2025-10-13 05:41:17,592 | INFO     | ***************************************
[2025-10-13 00:42:06] 2025-10-13 05:41:17,592 | INFO     | 
[2025-10-13 00:42:06] 2025-10-13 05:41:17,593 | INFO     | architecture information:
[2025-10-13 00:42:06] 2025-10-13 05:41:17,593 | INFO     | executing command: cat /etc/os-release
[2025-10-13 00:42:06] 2025-10-13 05:41:17,605 | INFO     | cat /etc/os-release:
[2025-10-13 00:42:06] NAME="CentOS Linux"
[2025-10-13 00:42:06] VERSION="7 (Core)"
[2025-10-13 00:42:06] ID="centos"
[2025-10-13 00:42:06] ID_LIKE="rhel fedora"
[2025-10-13 00:42:06] VERSION_ID="7"
[2025-10-13 00:42:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 00:42:06] ANSI_COLOR="0;31"
[2025-10-13 00:42:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 00:42:06] HOME_URL="https://www.centos.org/"
[2025-10-13 00:42:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 00:42:06] 
[2025-10-13 00:42:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 00:42:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 00:42:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 00:42:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 00:42:06] 
[2025-10-13 00:42:06] 2025-10-13 05:41:17,606 | INFO     | ***************************************
[2025-10-13 00:42:06] 2025-10-13 05:41:18,107 | INFO     | executing command: df -mP /data/boinc/slots/1
[2025-10-13 00:42:06] 2025-10-13 05:41:18,124 | INFO     | sufficient remaining disk space (408291377152 B)
[2025-10-13 00:42:06] 2025-10-13 05:41:18,124 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 00:42:06] 2025-10-13 05:41:18,124 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 00:42:06] 2025-10-13 05:41:18,124 | INFO     | update_server=False
[2025-10-13 00:42:06] 2025-10-13 05:41:18,124 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 00:42:06] 2025-10-13 05:41:18,125 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 00:42:06] 2025-10-13 05:41:18,312 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:42:06] 2025-10-13 05:41:18,313 | INFO     | aborting loop
[2025-10-13 00:42:06] 2025-10-13 05:41:18,369 | INFO     | all data control threads have been joined
[2025-10-13 00:42:06] 2025-10-13 05:41:19,034 | INFO     | all payload control threads have been joined
[2025-10-13 00:42:06] 2025-10-13 05:41:19,129 | INFO     | [job] retrieve thread has finished
[2025-10-13 00:42:06] 2025-10-13 05:41:19,195 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 00:42:06] 2025-10-13 05:41:19,315 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 00:42:06] 2025-10-13 05:41:19,317 | INFO     | [job] job monitor thread has finished
[2025-10-13 00:42:06] 2025-10-13 05:41:19,341 | INFO     | all job control threads have been joined
[2025-10-13 00:42:06] 2025-10-13 05:41:19,375 | INFO     | [data] control thread has finished
[2025-10-13 00:42:06] 2025-10-13 05:41:19,495 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 00:42:06] 2025-10-13 05:41:20,037 | INFO     | [payload] control thread has finished
[2025-10-13 00:42:06] 2025-10-13 05:41:20,061 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 00:42:06] 2025-10-13 05:41:20,124 | INFO     | [data] copytool_in thread has finished
[2025-10-13 00:42:06] 2025-10-13 05:41:20,130 | INFO     | [data] copytool_out thread has finished
[2025-10-13 00:42:06] 2025-10-13 05:41:20,259 | INFO     | [payload] validate_post thread has finished
[2025-10-13 00:42:06] 2025-10-13 05:41:20,346 | INFO     | [job] control thread has finished
[2025-10-13 00:42:06] 2025-10-13 05:41:20,396 | INFO     | [payload] failed_post thread has finished
[2025-10-13 00:42:06] 2025-10-13 05:41:20,494 | INFO     | [job] validate thread has finished
[2025-10-13 00:42:06] 2025-10-13 05:41:20,948 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:42:06] 2025-10-13 05:41:21,954 | INFO     | [job] queue monitor thread has finished
[2025-10-13 00:42:06] 2025-10-13 05:41:24,067 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 00:42:06] 2025-10-13 05:41:28,443 | INFO     | job.realtimelogging is not enabled
[2025-10-13 00:42:06] 2025-10-13 05:41:29,448 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 00:42:06] 2025-10-13 05:41:48,804 | INFO     | PID=2084392 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 00:42:06] 2025-10-13 05:41:48,805 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 00:42:06] 2025-10-13 05:41:48,805 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 00:42:06] 2025-10-13 05:41:48,805 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 00:42:06] 2025-10-13 05:41:59,655 | INFO     | [monitor] cgroup control has ended
[2025-10-13 00:42:06] 2025-10-13 05:42:01,644 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140018698979136)>', '<ExcThread(monitor, started 140018056152832)>']
[2025-10-13 00:42:06] 2025-10-13 05:42:01,869 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 00:42:06] 2025-10-13 05:42:01,869 | INFO     | [monitor] control thread has ended
[2025-10-13 00:42:06] 2025-10-13 05:42:06,670 | INFO     | all workflow threads have been joined
[2025-10-13 00:42:06] 2025-10-13 05:42:06,670 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 00:42:06] 2025-10-13 05:42:06,670 | INFO     | traces error code: 0
[2025-10-13 00:42:06] 2025-10-13 05:42:06,670 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 00:42:06] 2025-10-13 05:42:06,775 [wrapper] ==== pilot stdout END ====
[2025-10-13 00:42:06] 2025-10-13 05:42:06,777 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 00:42:06] 2025-10-13 05:42:06,779 [wrapper] pilotpid: 2084392
[2025-10-13 00:42:06] 2025-10-13 05:42:06,781 [wrapper] Pilot exit status: 0
[2025-10-13 00:42:06] 2025-10-13 05:42:06,788 [wrapper] pandaids: 6840181817
[2025-10-13 00:42:06] 2025-10-13 05:42:06,813 [wrapper] cleanup supervisor_pilot 2108147 2084393
[2025-10-13 00:42:06] 2025-10-13 05:42:06,816 [wrapper] Test setup, not cleaning
[2025-10-13 00:42:06] 2025-10-13 05:42:06,818 [wrapper] apfmon messages muted
[2025-10-13 00:42:06] 2025-10-13 05:42:06,819 [wrapper] ==== wrapper stdout END ====
[2025-10-13 00:42:06] 2025-10-13 05:42:06,821 [wrapper] ==== wrapper stderr END ====
[2025-10-13 00:42:06]  *** Error codes and diagnostics ***
[2025-10-13 00:42:06]     "exeErrorCode": 0,
[2025-10-13 00:42:06]     "exeErrorDiag": "",
[2025-10-13 00:42:06]     "pilotErrorCode": 0,
[2025-10-13 00:42:06]     "pilotErrorDiag": "",
[2025-10-13 00:42:06]  *** Listing of results directory ***
[2025-10-13 00:42:06] total 413784
[2025-10-13 00:42:06] -rw-r--r-- 1 boinc boinc    557409 Oct 12 08:55 pilot3.tar.gz
[2025-10-13 00:42:06] -rw-r--r-- 1 boinc boinc      5112 Oct 12 09:24 queuedata.json
[2025-10-13 00:42:06] -rwx------ 1 boinc boinc     36292 Oct 12 09:25 runpilot2-wrapper.sh
[2025-10-13 00:42:06] -rw-r--r-- 1 boinc boinc       100 Oct 12 22:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 00:42:06] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 22:34 run_atlas
[2025-10-13 00:42:06] -rw-r--r-- 1 boinc boinc       105 Oct 12 22:34 job.xml
[2025-10-13 00:42:06] -rw-r--r-- 2 boinc boinc 219525561 Oct 12 22:34 EVNT.46676267._004236.pool.root.1
[2025-10-13 00:42:06] -rw-r--r-- 1 boinc boinc      9534 Oct 12 22:34 init_data.xml
[2025-10-13 00:42:06] drwxrwx--x 2 boinc boinc      4096 Oct 12 22:34 shared
[2025-10-13 00:42:06] -rw-r--r-- 2 boinc boinc    569681 Oct 12 22:34 input.tar.gz
[2025-10-13 00:42:06] -rw-r--r-- 2 boinc boinc     15120 Oct 12 22:34 start_atlas.sh
[2025-10-13 00:42:06] -rw-r--r-- 1 boinc boinc         0 Oct 12 22:34 boinc_lockfile
[2025-10-13 00:42:06] -rw-r--r-- 1 boinc boinc      2550 Oct 12 22:34 pandaJob.out
[2025-10-13 00:42:06] -rw------- 1 boinc boinc    974373 Oct 12 22:34 agis_schedconf.cvmfs.json
[2025-10-13 00:42:06] -rw------- 1 boinc boinc   1560580 Oct 12 22:34 agis_ddmendpoints.agis.ALL.json
[2025-10-13 00:42:06] drwx------ 5 boinc boinc      4096 Oct 12 22:34 pilot3
[2025-10-13 00:42:06] -rw------- 1 boinc boinc 197536143 Oct 13 00:40 HITS.46676269._080692.pool.root.1
[2025-10-13 00:42:06] -rw-r--r-- 1 boinc boinc       529 Oct 13 00:41 boinc_task_state.xml
[2025-10-13 00:42:06] -rw------- 1 boinc boinc      1015 Oct 13 00:41 memory_monitor_summary.json
[2025-10-13 00:42:06] -rw------- 1 boinc boinc    298525 Oct 13 00:41 log.46676269._080692.job.log.tgz.1
[2025-10-13 00:42:06] -rw------- 1 boinc boinc      7749 Oct 13 00:41 heartbeat.json
[2025-10-13 00:42:06] -rw------- 1 boinc boinc        95 Oct 13 00:41 pilot_heartbeat.json
[2025-10-13 00:42:06] -rw-r--r-- 1 boinc boinc      8192 Oct 13 00:42 boinc_mmap_file
[2025-10-13 00:42:06] -rw-r--r-- 1 boinc boinc        27 Oct 13 00:42 wrapper_checkpoint.txt
[2025-10-13 00:42:06] -rw------- 1 boinc boinc      4818 Oct 13 00:42 pilotlog.txt
[2025-10-13 00:42:06] -rw------- 1 boinc boinc   1079476 Oct 13 00:42 log.46676269._080692.job.log.1
[2025-10-13 00:42:06] -rw------- 1 boinc boinc       357 Oct 13 00:42 output.list
[2025-10-13 00:42:06] -rw-r--r-- 1 boinc boinc       620 Oct 13 00:42 runtime_log
[2025-10-13 00:42:06] -rw------- 1 boinc boinc   1392640 Oct 13 00:42 result.tar.gz
[2025-10-13 00:42:06] -rw------- 1 boinc boinc       642 Oct 13 00:42 ztyMDmlBCS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmLFkNDmIbq5Zn.diag
[2025-10-13 00:42:06] -rw-r--r-- 1 boinc boinc      8622 Oct 13 00:42 runtime_log.err
[2025-10-13 00:42:06] -rw-r--r-- 1 boinc boinc     20776 Oct 13 00:42 stderr.txt
[2025-10-13 00:42:06] HITS file was successfully produced:
[2025-10-13 00:42:06] -rw------- 1 boinc boinc 197536143 Oct 13 00:40 shared/HITS.pool.root.1
[2025-10-13 00:42:06]  *** Contents of shared directory: ***
[2025-10-13 00:42:06] total 409232
[2025-10-13 00:42:06] -rw-r--r-- 2 boinc boinc 219525561 Oct 12 22:34 ATLAS.root_0
[2025-10-13 00:42:06] -rw-r--r-- 2 boinc boinc    569681 Oct 12 22:34 input.tar.gz
[2025-10-13 00:42:06] -rw-r--r-- 2 boinc boinc     15120 Oct 12 22:34 start_atlas.sh
[2025-10-13 00:42:06] -rw------- 1 boinc boinc 197536143 Oct 13 00:40 HITS.pool.root.1
[2025-10-13 00:42:06] -rw------- 1 boinc boinc   1392640 Oct 13 00:42 result.tar.gz
00:42:08 (2080599): run_atlas exited; CPU time 29273.997974
00:42:08 (2080599): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN