Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:32:40 (3392383): wrapper (7.7.26015): starting
03:32:40 (3392383): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 03:32:40] Arguments: --nthreads 3
[2025-10-13 03:32:40] Threads: 3
[2025-10-13 03:32:40] Checking for CVMFS
[2025-10-13 03:32:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 03:32:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 03:32:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 03:32:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 03:32:40] 2.9.2.0 1842130 5092 87360 151643 2 57 29719532 36864001 0 130560 0 4070006 99.991 174712 849 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 03:32:40] CVMFS is ok
[2025-10-13 03:32:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 03:32:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 03:32:40] Further information can be found at the LHC@home message board.
[2025-10-13 03:32:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 03:32:40] Checking for apptainer binary...
[2025-10-13 03:32:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 03:32:40] Running /usr/bin/apptainer --version
[2025-10-13 03:32:40] apptainer version 1.4.1-1.1
[2025-10-13 03:32:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 03:32:40] thA335a
[2025-10-13 03:32:40] apptainer works
[2025-10-13 03:32:40] Set ATHENA_PROC_NUMBER=3
[2025-10-13 03:32:40] Set ATHENA_CORE_NUMBER=3
[2025-10-13 03:32:40] Starting ATLAS job with PandaID=6840181882
[2025-10-13 03:32:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 04:53:08]  *** The last 200 lines of the pilot log: ***
[2025-10-13 04:53:08] 2025-10-13 02:52:37,310 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 04:53:08] 2025-10-13 02:52:37,310 | INFO     | ***************************************
[2025-10-13 04:53:08] 2025-10-13 02:52:37,310 | INFO     | 
[2025-10-13 04:53:08] 2025-10-13 02:52:37,310 | INFO     | architecture information:
[2025-10-13 04:53:08] 2025-10-13 02:52:37,310 | INFO     | executing command: cat /etc/os-release
[2025-10-13 04:53:08] 2025-10-13 02:52:37,319 | INFO     | cat /etc/os-release:
[2025-10-13 04:53:08] NAME="CentOS Linux"
[2025-10-13 04:53:08] VERSION="7 (Core)"
[2025-10-13 04:53:08] ID="centos"
[2025-10-13 04:53:08] ID_LIKE="rhel fedora"
[2025-10-13 04:53:08] VERSION_ID="7"
[2025-10-13 04:53:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 04:53:08] ANSI_COLOR="0;31"
[2025-10-13 04:53:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 04:53:08] HOME_URL="https://www.centos.org/"
[2025-10-13 04:53:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 04:53:08] 
[2025-10-13 04:53:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 04:53:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 04:53:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 04:53:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 04:53:08] 
[2025-10-13 04:53:08] 2025-10-13 02:52:37,319 | INFO     | ***************************************
[2025-10-13 04:53:08] 2025-10-13 02:52:37,823 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 04:53:08] 2025-10-13 02:52:37,836 | INFO     | sufficient remaining disk space (374946660352 B)
[2025-10-13 04:53:08] 2025-10-13 02:52:37,836 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 04:53:08] 2025-10-13 02:52:37,836 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 04:53:08] 2025-10-13 02:52:37,836 | INFO     | update_server=False
[2025-10-13 04:53:08] 2025-10-13 02:52:37,836 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 04:53:08] 2025-10-13 02:52:37,836 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:53:08] 2025-10-13 02:52:37,836 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 04:53:08] 2025-10-13 02:52:37,962 | INFO     | all payload control threads have been joined
[2025-10-13 04:53:08] 2025-10-13 02:52:38,193 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 04:53:08] 2025-10-13 02:52:38,194 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 04:53:08] 2025-10-13 02:52:38,194 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:53:08] 2025-10-13 02:52:38,194 | INFO     | will abort loop
[2025-10-13 04:53:08] 2025-10-13 02:52:38,697 | INFO     | all data control threads have been joined
[2025-10-13 04:53:08] 2025-10-13 02:52:38,842 | INFO     | [job] queue monitor thread has finished
[2025-10-13 04:53:08] 2025-10-13 02:52:38,842 | INFO     | [job] retrieve thread has finished
[2025-10-13 04:53:08] 2025-10-13 02:52:38,947 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 04:53:08] 2025-10-13 02:52:38,968 | INFO     | [payload] control thread has finished
[2025-10-13 04:53:08] 2025-10-13 02:52:39,199 | INFO     | [job] job monitor thread has finished
[2025-10-13 04:53:08] 2025-10-13 02:52:39,237 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 04:53:08] 2025-10-13 02:52:39,256 | INFO     | [payload] failed_post thread has finished
[2025-10-13 04:53:08] 2025-10-13 02:52:39,528 | INFO     | all job control threads have been joined
[2025-10-13 04:53:08] 2025-10-13 02:52:39,532 | INFO     | [data] copytool_in thread has finished
[2025-10-13 04:53:08] 2025-10-13 02:52:39,702 | INFO     | [data] control thread has finished
[2025-10-13 04:53:08] 2025-10-13 02:52:39,854 | INFO     | [job] validate thread has finished
[2025-10-13 04:53:08] 2025-10-13 02:52:39,863 | INFO     | [payload] validate_post thread has finished
[2025-10-13 04:53:08] 2025-10-13 02:52:39,909 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 04:53:08] 2025-10-13 02:52:39,913 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 04:53:08] 2025-10-13 02:52:40,534 | INFO     | [job] control thread has finished
[2025-10-13 04:53:08] 2025-10-13 02:52:40,954 | INFO     | [data] copytool_out thread has finished
[2025-10-13 04:53:08] 2025-10-13 02:52:41,843 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 04:53:08] 2025-10-13 02:52:48,504 | INFO     | job.realtimelogging is not enabled
[2025-10-13 04:53:08] 2025-10-13 02:52:49,510 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 04:53:08] 2025-10-13 02:52:51,792 | INFO     | [monitor] cgroup control has ended
[2025-10-13 04:53:08] 2025-10-13 02:52:53,441 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139866815960896)>', '<ExcThread(monitor, started 139866331404032)>']
[2025-10-13 04:53:08] 2025-10-13 02:52:58,467 | INFO     | all workflow threads have been joined
[2025-10-13 04:53:08] 2025-10-13 02:52:58,467 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 04:53:08] 2025-10-13 02:52:58,467 | INFO     | traces error code: 0
[2025-10-13 04:53:08] 2025-10-13 02:52:58,468 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 04:53:08] 2025-10-13 02:53:08,361 | INFO     | PID=3396106 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 04:53:08] 2025-10-13 02:53:08,361 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 04:53:08] 2025-10-13 02:53:08,361 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 04:53:08] 2025-10-13 02:53:08,361 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 04:53:08] 2025-10-13 02:53:08,361 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 04:53:08] 2025-10-13 02:53:08,361 | INFO     | [monitor] control thread has ended
[2025-10-13 04:53:08] 2025-10-13 02:53:08,408 [wrapper] ==== pilot stdout END ====
[2025-10-13 04:53:08] 2025-10-13 02:53:08,411 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 04:53:08] 2025-10-13 02:53:08,413 [wrapper] pilotpid: 3396106
[2025-10-13 04:53:08] 2025-10-13 02:53:08,416 [wrapper] Pilot exit status: 0
[2025-10-13 04:53:08] 2025-10-13 02:53:08,423 [wrapper] pandaids: 6840181882
[2025-10-13 04:53:08] 2025-10-13 02:53:08,440 [wrapper] cleanup supervisor_pilot 3414581 3396107
[2025-10-13 04:53:08] 2025-10-13 02:53:08,443 [wrapper] Test setup, not cleaning
[2025-10-13 04:53:08] 2025-10-13 02:53:08,445 [wrapper] apfmon messages muted
[2025-10-13 04:53:08] 2025-10-13 02:53:08,447 [wrapper] ==== wrapper stdout END ====
[2025-10-13 04:53:08] 2025-10-13 02:53:08,450 [wrapper] ==== wrapper stderr END ====
[2025-10-13 04:53:08]  *** Error codes and diagnostics ***
[2025-10-13 04:53:08]     "exeErrorCode": 0,
[2025-10-13 04:53:08]     "exeErrorDiag": "",
[2025-10-13 04:53:08]     "pilotErrorCode": 0,
[2025-10-13 04:53:08]     "pilotErrorDiag": "",
[2025-10-13 04:53:08]  *** Listing of results directory ***
[2025-10-13 04:53:08] total 414180
[2025-10-13 04:53:08] -rw-r--r-- 1 boinc boinc    557409 Oct 12 15:55 pilot3.tar.gz
[2025-10-13 04:53:08] -rwx------ 1 boinc boinc     36292 Oct 12 16:24 runpilot2-wrapper.sh
[2025-10-13 04:53:08] -rw-r--r-- 1 boinc boinc      5112 Oct 12 16:24 queuedata.json
[2025-10-13 04:53:08] -rw-r--r-- 1 boinc boinc       100 Oct 13 03:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 04:53:08] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 03:32 run_atlas
[2025-10-13 04:53:08] -rw-r--r-- 1 boinc boinc       105 Oct 13 03:32 job.xml
[2025-10-13 04:53:08] -rw-r--r-- 2 boinc boinc 222533461 Oct 13 03:32 EVNT.46676267._004238.pool.root.1
[2025-10-13 04:53:08] -rw-r--r-- 2 boinc boinc    569676 Oct 13 03:32 input.tar.gz
[2025-10-13 04:53:08] -rw-r--r-- 2 boinc boinc     15120 Oct 13 03:32 start_atlas.sh
[2025-10-13 04:53:08] drwxrwx--x 2 boinc boinc      4096 Oct 13 03:32 shared
[2025-10-13 04:53:08] -rw-r--r-- 1 boinc boinc         0 Oct 13 03:32 boinc_setup_complete
[2025-10-13 04:53:08] -rw-r--r-- 1 boinc boinc      6447 Oct 13 03:32 init_data.xml
[2025-10-13 04:53:08] -rw-r--r-- 1 boinc boinc         0 Oct 13 03:32 boinc_lockfile
[2025-10-13 04:53:08] -rw-r--r-- 1 boinc boinc      2550 Oct 13 03:32 pandaJob.out
[2025-10-13 04:53:08] -rw------- 1 boinc boinc    975595 Oct 13 03:32 agis_schedconf.cvmfs.json
[2025-10-13 04:53:08] -rw------- 1 boinc boinc   1560580 Oct 13 03:32 agis_ddmendpoints.agis.ALL.json
[2025-10-13 04:53:08] drwx------ 5 boinc boinc      4096 Oct 13 03:32 pilot3
[2025-10-13 04:53:08] -rw------- 1 boinc boinc        95 Oct 13 04:52 pilot_heartbeat.json
[2025-10-13 04:53:08] -rw------- 1 boinc boinc 195783356 Oct 13 04:52 HITS.46676269._080747.pool.root.1
[2025-10-13 04:53:08] -rw-r--r-- 1 boinc boinc       529 Oct 13 04:52 boinc_task_state.xml
[2025-10-13 04:53:08] -rw------- 1 boinc boinc      1017 Oct 13 04:52 memory_monitor_summary.json
[2025-10-13 04:53:08] -rw------- 1 boinc boinc    252319 Oct 13 04:52 log.46676269._080747.job.log.tgz.1
[2025-10-13 04:53:08] -rw------- 1 boinc boinc      7755 Oct 13 04:52 heartbeat.json
[2025-10-13 04:53:08] -rw-r--r-- 1 boinc boinc      8192 Oct 13 04:53 boinc_mmap_file
[2025-10-13 04:53:08] -rw-r--r-- 1 boinc boinc        27 Oct 13 04:53 wrapper_checkpoint.txt
[2025-10-13 04:53:08] -rw------- 1 boinc boinc       747 Oct 13 04:53 pilotlog.txt
[2025-10-13 04:53:08] -rw------- 1 boinc boinc    705169 Oct 13 04:53 log.46676269._080747.job.log.1
[2025-10-13 04:53:08] -rw------- 1 boinc boinc       357 Oct 13 04:53 output.list
[2025-10-13 04:53:08] -rw-r--r-- 1 boinc boinc       620 Oct 13 04:53 runtime_log
[2025-10-13 04:53:08] -rw------- 1 boinc boinc    972800 Oct 13 04:53 result.tar.gz
[2025-10-13 04:53:08] -rw------- 1 boinc boinc       659 Oct 13 04:53 xGfNDmWBCS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmAFkNDm72uIAn.diag
[2025-10-13 04:53:08] -rw-r--r-- 1 boinc boinc      8782 Oct 13 04:53 runtime_log.err
[2025-10-13 04:53:08] -rw-r--r-- 1 boinc boinc      9552 Oct 13 04:53 stderr.txt
[2025-10-13 04:53:08] HITS file was successfully produced:
[2025-10-13 04:53:08] -rw------- 1 boinc boinc 195783356 Oct 13 04:52 shared/HITS.pool.root.1
[2025-10-13 04:53:08]  *** Contents of shared directory: ***
[2025-10-13 04:53:08] total 410052
[2025-10-13 04:53:08] -rw-r--r-- 2 boinc boinc 222533461 Oct 13 03:32 ATLAS.root_0
[2025-10-13 04:53:08] -rw-r--r-- 2 boinc boinc    569676 Oct 13 03:32 input.tar.gz
[2025-10-13 04:53:08] -rw-r--r-- 2 boinc boinc     15120 Oct 13 03:32 start_atlas.sh
[2025-10-13 04:53:08] -rw------- 1 boinc boinc 195783356 Oct 13 04:52 HITS.pool.root.1
[2025-10-13 04:53:08] -rw------- 1 boinc boinc    972800 Oct 13 04:53 result.tar.gz
04:53:09 (3392383): run_atlas exited; CPU time 13714.921718
04:53:09 (3392383): called boinc_finish(0)

</stderr_txt>
]]>

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