Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
02:20:42 (3269516): wrapper (7.7.26015): starting
02:20:42 (3269516): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 02:20:42] Arguments: --nthreads 3
[2025-10-13 02:20:42] Threads: 3
[2025-10-13 02:20:42] Checking for CVMFS
[2025-10-13 02:20:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 02:20:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 02:20:42] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 02:20:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 02:20:42] 2.9.2.0 1719469 5084 85500 151642 0 56 30681129 36864001 0 130560 0 4070043 99.991 174778 846 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 02:20:42] CVMFS is ok
[2025-10-13 02:20:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 02:20:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 02:20:42] Further information can be found at the LHC@home message board.
[2025-10-13 02:20:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 02:20:42] Checking for apptainer binary...
[2025-10-13 02:20:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 02:20:42] Running /usr/bin/apptainer --version
[2025-10-13 02:20:42] apptainer version 1.4.1-1.1
[2025-10-13 02:20:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 02:20:42] thA349
[2025-10-13 02:20:42] apptainer works
[2025-10-13 02:20:42] Set ATHENA_PROC_NUMBER=3
[2025-10-13 02:20:42] Set ATHENA_CORE_NUMBER=3
[2025-10-13 02:20:42] Starting ATLAS job with PandaID=6839988322
[2025-10-13 02:20:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 03:42:59]  *** The last 200 lines of the pilot log: ***
[2025-10-13 03:42:59] 2025-10-13 01:42:12,729 | INFO     | [job] control thread has finished
[2025-10-13 03:42:59] 2025-10-13 01:42:12,913 | INFO     | [data] copytool_in thread has finished
[2025-10-13 03:42:59] 2025-10-13 01:42:12,993 | INFO     | all payload control threads have been joined
[2025-10-13 03:42:59] 2025-10-13 01:42:13,072 | INFO     | [payload] validate_post thread has finished
[2025-10-13 03:42:59] 2025-10-13 01:42:13,123 | INFO     | [data] control thread has finished
[2025-10-13 03:42:59] 2025-10-13 01:42:13,232 | INFO     | [job] validate thread has finished
[2025-10-13 03:42:59] 2025-10-13 01:42:13,261 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 03:42:59] 2025-10-13 01:42:13,370 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 03:42:59] 2025-10-13 01:42:13,393 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 03:42:59] 2025-10-13 01:42:13,664 | INFO     | [data] copytool_out thread has finished
[2025-10-13 03:42:59] 2025-10-13 01:42:13,839 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 03:42:59] 2025-10-13 01:42:13,912 | INFO     | [payload] failed_post thread has finished
[2025-10-13 03:42:59] 2025-10-13 01:42:13,999 | INFO     | [payload] control thread has finished
[2025-10-13 03:42:59] 2025-10-13 01:42:17,401 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 03:42:59] 2025-10-13 01:42:22,444 | INFO     | job.realtimelogging is not enabled
[2025-10-13 03:42:59] 2025-10-13 01:42:23,449 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 03:42:59] 2025-10-13 01:42:42,521 | INFO     | PID=3273241 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 03:42:59] 2025-10-13 01:42:42,521 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 03:42:59] 2025-10-13 01:42:42,521 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 03:42:59] 2025-10-13 01:42:42,521 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 03:42:59] 2025-10-13 01:42:53,439 | INFO     | [monitor] cgroup control has ended
[2025-10-13 03:42:59] 2025-10-13 01:42:54,445 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140099219248960)>', '<ExcThread(monitor, started 140098133812992)>']
[2025-10-13 03:42:59] 2025-10-13 01:42:54,581 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 03:42:59] 2025-10-13 01:42:54,582 | INFO     | [monitor] control thread has ended
[2025-10-13 03:42:59] 2025-10-13 01:42:59,469 | INFO     | all workflow threads have been joined
[2025-10-13 03:42:59] 2025-10-13 01:42:59,470 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 03:42:59] 2025-10-13 01:42:59,470 | INFO     | traces error code: 0
[2025-10-13 03:42:59] 2025-10-13 01:42:59,470 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 03:42:59] 2025-10-13 01:42:59,520 [wrapper] ==== pilot stdout END ====
[2025-10-13 03:42:59] 2025-10-13 01:42:59,523 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 03:42:59] 2025-10-13 01:42:59,525 [wrapper] pilotpid: 3273241
[2025-10-13 03:42:59] 2025-10-13 01:42:59,528 [wrapper] Pilot exit status: 0
[2025-10-13 03:42:59] 2025-10-13 01:42:59,535 [wrapper] pandaids: 6839988322
[2025-10-13 03:42:59] 2025-10-13 01:42:59,553 [wrapper] cleanup supervisor_pilot 3291725 3273242
[2025-10-13 03:42:59] 2025-10-13 01:42:59,556 [wrapper] Test setup, not cleaning
[2025-10-13 03:42:59] 2025-10-13 01:42:59,558 [wrapper] apfmon messages muted
[2025-10-13 03:42:59] 2025-10-13 01:42:59,561 [wrapper] ==== wrapper stdout END ====
[2025-10-13 03:42:59] 2025-10-13 01:42:59,563 [wrapper] ==== wrapper stderr END ====
[2025-10-13 03:42:59]  *** Error codes and diagnostics ***
[2025-10-13 03:42:59]     "exeErrorCode": 0,
[2025-10-13 03:42:59]     "exeErrorDiag": "",
[2025-10-13 03:42:59]     "pilotErrorCode": 0,
[2025-10-13 03:42:59]     "pilotErrorDiag": "",
[2025-10-13 03:42:59]  *** Listing of results directory ***
[2025-10-13 03:42:59] total 408956
[2025-10-13 03:42:59] -rw-r--r-- 1 boinc boinc    557409 Oct 12 14:35 pilot3.tar.gz
[2025-10-13 03:42:59] -rw-r--r-- 1 boinc boinc      5112 Oct 12 14:43 queuedata.json
[2025-10-13 03:42:59] -rwx------ 1 boinc boinc     36292 Oct 12 14:43 runpilot2-wrapper.sh
[2025-10-13 03:42:59] -rw-r--r-- 1 boinc boinc       100 Oct 13 02:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 03:42:59] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 02:20 run_atlas
[2025-10-13 03:42:59] -rw-r--r-- 1 boinc boinc       105 Oct 13 02:20 job.xml
[2025-10-13 03:42:59] -rw-r--r-- 2 boinc boinc 219801625 Oct 13 02:20 EVNT.46676267._003804.pool.root.1
[2025-10-13 03:42:59] -rw-r--r-- 2 boinc boinc    569682 Oct 13 02:20 input.tar.gz
[2025-10-13 03:42:59] -rw-r--r-- 2 boinc boinc     15120 Oct 13 02:20 start_atlas.sh
[2025-10-13 03:42:59] drwxrwx--x 2 boinc boinc      4096 Oct 13 02:20 shared
[2025-10-13 03:42:59] -rw-r--r-- 1 boinc boinc         0 Oct 13 02:20 boinc_setup_complete
[2025-10-13 03:42:59] -rw-r--r-- 1 boinc boinc      6446 Oct 13 02:20 init_data.xml
[2025-10-13 03:42:59] -rw-r--r-- 1 boinc boinc         0 Oct 13 02:20 boinc_lockfile
[2025-10-13 03:42:59] -rw-r--r-- 1 boinc boinc      2550 Oct 13 02:20 pandaJob.out
[2025-10-13 03:42:59] -rw------- 1 boinc boinc    975603 Oct 13 02:20 agis_schedconf.cvmfs.json
[2025-10-13 03:42:59] -rw------- 1 boinc boinc   1560580 Oct 13 02:20 agis_ddmendpoints.agis.ALL.json
[2025-10-13 03:42:59] drwx------ 5 boinc boinc      4096 Oct 13 02:20 pilot3
[2025-10-13 03:42:59] -rw------- 1 boinc boinc 193148127 Oct 13 03:41 HITS.46676269._078415.pool.root.1
[2025-10-13 03:42:59] -rw-r--r-- 1 boinc boinc       529 Oct 13 03:41 boinc_task_state.xml
[2025-10-13 03:42:59] -rw------- 1 boinc boinc      1014 Oct 13 03:41 memory_monitor_summary.json
[2025-10-13 03:42:59] -rw------- 1 boinc boinc    247181 Oct 13 03:42 log.46676269._078415.job.log.tgz.1
[2025-10-13 03:42:59] -rw------- 1 boinc boinc      7753 Oct 13 03:42 heartbeat.json
[2025-10-13 03:42:59] -rw------- 1 boinc boinc        95 Oct 13 03:42 pilot_heartbeat.json
[2025-10-13 03:42:59] -rw-r--r-- 1 boinc boinc      8192 Oct 13 03:42 boinc_mmap_file
[2025-10-13 03:42:59] -rw-r--r-- 1 boinc boinc        27 Oct 13 03:42 wrapper_checkpoint.txt
[2025-10-13 03:42:59] -rw------- 1 boinc boinc      4824 Oct 13 03:42 pilotlog.txt
[2025-10-13 03:42:59] -rw------- 1 boinc boinc    716870 Oct 13 03:42 log.46676269._078415.job.log.1
[2025-10-13 03:42:59] -rw------- 1 boinc boinc       357 Oct 13 03:42 output.list
[2025-10-13 03:42:59] -rw-r--r-- 1 boinc boinc       620 Oct 13 03:42 runtime_log
[2025-10-13 03:42:59] -rw------- 1 boinc boinc    983040 Oct 13 03:42 result.tar.gz
[2025-10-13 03:42:59] -rw-r--r-- 1 boinc boinc      8777 Oct 13 03:42 runtime_log.err
[2025-10-13 03:42:59] -rw------- 1 boinc boinc       658 Oct 13 03:42 BAzNDmEbAS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtpjNDmGwLYCn.diag
[2025-10-13 03:42:59] -rw-r--r-- 1 boinc boinc      6339 Oct 13 03:42 stderr.txt
[2025-10-13 03:42:59] HITS file was successfully produced:
[2025-10-13 03:42:59] -rw------- 1 boinc boinc 193148127 Oct 13 03:41 shared/HITS.pool.root.1
[2025-10-13 03:42:59]  *** Contents of shared directory: ***
[2025-10-13 03:42:59] total 404820
[2025-10-13 03:42:59] -rw-r--r-- 2 boinc boinc 219801625 Oct 13 02:20 ATLAS.root_0
[2025-10-13 03:42:59] -rw-r--r-- 2 boinc boinc    569682 Oct 13 02:20 input.tar.gz
[2025-10-13 03:42:59] -rw-r--r-- 2 boinc boinc     15120 Oct 13 02:20 start_atlas.sh
[2025-10-13 03:42:59] -rw------- 1 boinc boinc 193148127 Oct 13 03:41 HITS.pool.root.1
[2025-10-13 03:42:59] -rw------- 1 boinc boinc    983040 Oct 13 03:42 result.tar.gz
03:43:01 (3269516): run_atlas exited; CPU time 13944.813964
03:43:01 (3269516): called boinc_finish(0)

</stderr_txt>
]]>

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