Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
20:17:00 (2048253): wrapper (7.7.26015): starting
20:17:00 (2048253): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 20:17:00] Arguments: --nthreads 4
[2025-10-12 20:17:00] Threads: 4
[2025-10-12 20:17:00] Checking for CVMFS
[2025-10-12 20:17:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 20:17:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 20:17:00] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 20:17:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 20:17:01] 2.11.3.0 4671 10384 99360 151643 0 56 2325741 4194305 0 130560 0 4716075 99.984 423331 768 http://s1unl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.59.5:3128 1
[2025-10-12 20:17:01] CVMFS is ok
[2025-10-12 20:17:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:17:01] Checking for apptainer binary...
[2025-10-12 20:17:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 20:17:01] Running /usr/bin/apptainer --version
[2025-10-12 20:17:01] apptainer version 1.4.2-1.fc42
[2025-10-12 20:17:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:17:01] R7OwensSE
[2025-10-12 20:17:01] apptainer works
[2025-10-12 20:17:01] Set ATHENA_PROC_NUMBER=4
[2025-10-12 20:17:01] Set ATHENA_CORE_NUMBER=4
[2025-10-12 20:17:01] Starting ATLAS job with PandaID=6839928780
[2025-10-12 20:17:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/data/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:34:31]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:34:31] 2025-10-13 03:33:53,068 | INFO     | time since job start (8200s) is within the limit (172800.0s)
[2025-10-12 22:34:31] 2025-10-13 03:33:53,296 | INFO     | monitor loop #622: job 0:6839928780 is in state 'finished'
[2025-10-12 22:34:31] 2025-10-13 03:33:53,297 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 22:34:31] 2025-10-13 03:33:54,533 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 22:34:31] 2025-10-13 03:33:54,536 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3368.7486875
[2025-10-12 22:34:31] 2025-10-13 03:33:54,538 | INFO     | using path: /data/boinc/slots/1/PanDA_Pilot-6839928780/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 22:34:31] 2025-10-13 03:33:54,539 | INFO     | extracted standard info from prmon json
[2025-10-12 22:34:31] 2025-10-13 03:33:54,539 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 22:34:31] 2025-10-13 03:33:54,539 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 22:34:31] 2025-10-13 03:33:54,539 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 22:34:31] 2025-10-13 03:33:54,539 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 22:34:31] 2025-10-13 03:33:54,542 | INFO     | fitting pss+swap vs Time
[2025-10-12 22:34:31] 2025-10-13 03:33:54,542 | INFO     | sum of square deviations: 746051197.5
[2025-10-12 22:34:31] 2025-10-13 03:33:54,543 | INFO     | sum of deviations: -28893722166.500034
[2025-10-12 22:34:31] 2025-10-13 03:33:54,543 | INFO     | mean x: 1760322314.5
[2025-10-12 22:34:31] 2025-10-13 03:33:54,543 | INFO     | mean y: 2470163.4104477614
[2025-10-12 22:34:31] 2025-10-13 03:33:54,543 | INFO     | -- intersect: 68177769726.08329
[2025-10-12 22:34:31] 2025-10-13 03:33:54,543 | INFO     | intersect: 68177769726.08329
[2025-10-12 22:34:31] 2025-10-13 03:33:54,543 | INFO     | chi2: 1.5460921375445824
[2025-10-12 22:34:31] 2025-10-13 03:33:54,543 | INFO     | sum of square deviations: 665612480.0
[2025-10-12 22:34:31] 2025-10-13 03:33:54,544 | INFO     | sum of deviations: -26938814144.000004
[2025-10-12 22:34:31] 2025-10-13 03:33:54,544 | INFO     | mean x: 1760322162.0
[2025-10-12 22:34:31] 2025-10-13 03:33:54,544 | INFO     | mean y: 2473871.387596899
[2025-10-12 22:34:31] 2025-10-13 03:33:54,544 | INFO     | -- intersect: 71246618145.36856
[2025-10-12 22:34:31] 2025-10-13 03:33:54,544 | INFO     | intersect: 71246618145.36856
[2025-10-12 22:34:31] 2025-10-13 03:33:54,545 | INFO     | chi2: 1.5381379915746702
[2025-10-12 22:34:31] 2025-10-13 03:33:54,545 | INFO     | current chi2=1.5381379915746702 (change=0.5144677847301201 %)
[2025-10-12 22:34:31] 2025-10-13 03:33:54,545 | INFO     | right removable region: 128
[2025-10-12 22:34:31] 2025-10-13 03:33:54,545 | INFO     | sum of square deviations: 665612480.0
[2025-10-12 22:34:31] 2025-10-13 03:33:54,546 | INFO     | sum of deviations: -42882521881.999985
[2025-10-12 22:34:31] 2025-10-13 03:33:54,546 | INFO     | mean x: 1760322467.0
[2025-10-12 22:34:31] 2025-10-13 03:33:54,546 | INFO     | mean y: 2495978.96124031
[2025-10-12 22:34:31] 2025-10-13 03:33:54,546 | INFO     | -- intersect: 113412428903.45161
[2025-10-12 22:34:31] 2025-10-13 03:33:54,546 | INFO     | intersect: 113412428903.45161
[2025-10-12 22:34:31] 2025-10-13 03:33:54,546 | INFO     | chi2: 0.27387936251353767
[2025-10-12 22:34:31] 2025-10-13 03:33:54,546 | INFO     | current chi2=0.27387936251353767 (change=82.28570239361687 %)
[2025-10-12 22:34:31] 2025-10-13 03:33:54,546 | INFO     | sum of square deviations: 591173875.0
[2025-10-12 22:34:31] 2025-10-13 03:33:54,547 | INFO     | sum of deviations: -39452098157.500015
[2025-10-12 22:34:31] 2025-10-13 03:33:54,547 | INFO     | mean x: 1760322619.5
[2025-10-12 22:34:31] 2025-10-13 03:33:54,547 | INFO     | mean y: 2488891.5080645164
[2025-10-12 22:34:31] 2025-10-13 03:33:54,547 | INFO     | -- intersect: 117477945284.74188
[2025-10-12 22:34:31] 2025-10-13 03:33:54,547 | INFO     | intersect: 117477945284.74188
[2025-10-12 22:34:31] 2025-10-13 03:33:54,547 | INFO     | chi2: 0.2672419849541675
[2025-10-12 22:34:31] 2025-10-13 03:33:54,547 | INFO     | current chi2=0.2672419849541675 (change=2.423467580198592 %)
[2025-10-12 22:34:31] 2025-10-13 03:33:54,547 | INFO     | left removable region: 20
[2025-10-12 22:34:31] 2025-10-13 03:33:54,548 | INFO     | sum of square deviations: 390582207.0
[2025-10-12 22:34:31] 2025-10-13 03:33:54,548 | INFO     | sum of deviations: -27526893824.499996
[2025-10-12 22:34:31] 2025-10-13 03:33:54,548 | INFO     | mean x: 1760322741.5
[2025-10-12 22:34:31] 2025-10-13 03:33:54,548 | INFO     | mean y: 2470678.564814815
[2025-10-12 22:34:31] 2025-10-13 03:33:54,548 | INFO     | -- intersect: 124063977664.01552
[2025-10-12 22:34:31] 2025-10-13 03:33:54,548 | INFO     | intersect: 124063977664.01552
[2025-10-12 22:34:31] 2025-10-13 03:33:54,548 | INFO     | chi2: 0.2472034969765925
[2025-10-12 22:34:31] 2025-10-13 03:33:54,549 | INFO     | -- intersect: 124063977664.01552
[2025-10-12 22:34:31] 2025-10-13 03:33:54,549 | INFO     | current memory leak: -70.48 B/s (using 108 data points, chi2=0.25)
[2025-10-12 22:34:31] 2025-10-13 03:33:54,549 | INFO     | could have reported an average CPU frequency of 3406 MHz (8 samples)
[2025-10-12 22:34:31] 2025-10-13 03:33:54,549 | INFO     | ..............................
[2025-10-12 22:34:31] 2025-10-13 03:33:54,549 | INFO     | . Timing measurements:
[2025-10-12 22:34:31] 2025-10-13 03:33:54,549 | INFO     | . get job = 0 s
[2025-10-12 22:34:31] 2025-10-13 03:33:54,549 | INFO     | . initial setup = 3 s
[2025-10-12 22:34:31] 2025-10-13 03:33:54,549 | INFO     | . payload setup = 5 s
[2025-10-12 22:34:31] 2025-10-13 03:33:54,549 | INFO     | . stage-in = 0 s
[2025-10-12 22:34:31] 2025-10-13 03:33:54,549 | INFO     | . payload execution = 8170 s
[2025-10-12 22:34:31] 2025-10-13 03:33:54,549 | INFO     | . stage-out = 0 s
[2025-10-12 22:34:31] 2025-10-13 03:33:54,550 | INFO     | . log creation = 0 s
[2025-10-12 22:34:31] 2025-10-13 03:33:54,550 | INFO     | ..............................
[2025-10-12 22:34:31] 2025-10-13 03:33:54,631 | INFO     | 
[2025-10-12 22:34:31] 2025-10-13 03:33:54,631 | INFO     | job summary report
[2025-10-12 22:34:31] 2025-10-13 03:33:54,631 | INFO     | --------------------------------------------------
[2025-10-12 22:34:31] 2025-10-13 03:33:54,631 | INFO     | PanDA job id: 6839928780
[2025-10-12 22:34:31] 2025-10-13 03:33:54,631 | INFO     | task id: 46676269
[2025-10-12 22:34:31] 2025-10-13 03:33:54,631 | INFO     | errors: (none)
[2025-10-12 22:34:31] 2025-10-13 03:33:54,631 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 22:34:31] 2025-10-13 03:33:54,631 | INFO     | pilot state: finished 
[2025-10-12 22:34:31] 2025-10-13 03:33:54,631 | INFO     | transexitcode: 0
[2025-10-12 22:34:31] 2025-10-13 03:33:54,632 | INFO     | exeerrorcode: 0
[2025-10-12 22:34:31] 2025-10-13 03:33:54,632 | INFO     | exeerrordiag: 
[2025-10-12 22:34:31] 2025-10-13 03:33:54,632 | INFO     | exitcode: 0
[2025-10-12 22:34:31] 2025-10-13 03:33:54,632 | INFO     | exitmsg: OK
[2025-10-12 22:34:31] 2025-10-13 03:33:54,632 | INFO     | cpuconsumptiontime: 31168 s
[2025-10-12 22:34:31] 2025-10-13 03:33:54,632 | INFO     | nevents: 400
[2025-10-12 22:34:31] 2025-10-13 03:33:54,632 | INFO     | neventsw: 0
[2025-10-12 22:34:31] 2025-10-13 03:33:54,632 | INFO     | pid: 2058628
[2025-10-12 22:34:31] 2025-10-13 03:33:54,632 | INFO     | pgrp: 2058628
[2025-10-12 22:34:31] 2025-10-13 03:33:54,632 | INFO     | corecount: 4
[2025-10-12 22:34:31] 2025-10-13 03:33:54,632 | INFO     | event service: False
[2025-10-12 22:34:31] 2025-10-13 03:33:54,632 | INFO     | sizes: {0: 2348854, 4: 2349116, 11: 2349144, 8179: 2377048, 8181: 2386040, 8182: 2386096, 8186: 2386418}
[2025-10-12 22:34:31] 2025-10-13 03:33:54,632 | INFO     | --------------------------------------------------
[2025-10-12 22:34:31] 2025-10-13 03:33:54,632 | INFO     | 
[2025-10-12 22:34:31] 2025-10-13 03:33:54,633 | INFO     | executing command: ls -lF /data/boinc/slots/1
[2025-10-12 22:34:31] 2025-10-13 03:33:54,665 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 22:34:31] 2025-10-13 03:33:54,666 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 22:34:31] 2025-10-13 03:33:54,666 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 22:34:31] 2025-10-13 03:33:54,666 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 22:34:31] 2025-10-13 03:33:54,666 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 22:34:31] 2025-10-13 03:33:54,666 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 22:34:31] 2025-10-13 03:33:54,666 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 22:34:31] 2025-10-13 03:33:54,666 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 22:34:31] 2025-10-13 03:33:54,666 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 22:34:31] 2025-10-13 03:33:54,666 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 22:34:31] 2025-10-13 03:33:54,666 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 22:34:31] 2025-10-13 03:33:54,666 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 22:34:31] 2025-10-13 03:33:54,667 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 22:34:31] 2025-10-13 03:33:54,667 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 22:34:31] 2025-10-13 03:33:54,667 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 22:34:31] 2025-10-13 03:33:54,667 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 22:34:31] 2025-10-13 03:33:54,667 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 22:34:31] 2025-10-13 03:33:54,667 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 22:34:31] 2025-10-13 03:33:54,667 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 22:34:31] 2025-10-13 03:33:54,667 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 22:34:31] 2025-10-13 03:33:54,667 | INFO     | job 6839928780 has completed (purged errors)
[2025-10-12 22:34:31] 2025-10-13 03:33:54,667 | INFO     | overall cleanup function is called
[2025-10-12 22:34:31] 2025-10-13 03:33:55,674 | INFO     | --- collectZombieJob: --- 10, [2058628]
[2025-10-12 22:34:31] 2025-10-13 03:33:55,675 | INFO     | zombie collector waiting for pid 2058628
[2025-10-12 22:34:31] 2025-10-13 03:33:55,675 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 22:34:31] 2025-10-13 03:33:55,675 | INFO     | collected zombie processes
[2025-10-12 22:34:31] 2025-10-13 03:33:55,675 | INFO     | will attempt to kill all subprocesses of pid=2058628
[2025-10-12 22:34:31] 2025-10-13 03:33:55,772 | INFO     | process IDs to be killed: [2058628] (in reverse order)
[2025-10-12 22:34:31] 2025-10-13 03:33:55,822 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 22:34:31] 2025-10-13 03:33:55,822 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 22:34:31] 2025-10-13 03:33:55,825 | INFO     | did not find any defunct processes belonging to 2058628
[2025-10-12 22:34:31] 2025-10-13 03:33:55,828 | INFO     | did not find any defunct processes belonging to 2058628
[2025-10-12 22:34:31] 2025-10-13 03:33:55,828 | INFO     | ready for new job
[2025-10-12 22:34:31] 2025-10-13 03:33:55,828 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 22:34:31] 2025-10-13 03:33:55,830 | INFO     | ***************************************
[2025-10-12 22:34:31] 2025-10-13 03:33:55,830 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 22:34:31] 2025-10-13 03:33:55,830 | INFO     | ***************************************
[2025-10-12 22:34:31] 2025-10-13 03:33:55,830 | INFO     | 
[2025-10-12 22:34:31] 2025-10-13 03:33:55,831 | INFO     | architecture information:
[2025-10-12 22:34:31] 2025-10-13 03:33:55,832 | INFO     | executing command: cat /etc/os-release
[2025-10-12 22:34:31] 2025-10-13 03:33:55,846 | INFO     | cat /etc/os-release:
[2025-10-12 22:34:31] NAME="CentOS Linux"
[2025-10-12 22:34:31] VERSION="7 (Core)"
[2025-10-12 22:34:31] ID="centos"
[2025-10-12 22:34:31] ID_LIKE="rhel fedora"
[2025-10-12 22:34:31] VERSION_ID="7"
[2025-10-12 22:34:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 22:34:31] ANSI_COLOR="0;31"
[2025-10-12 22:34:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 22:34:31] HOME_URL="https://www.centos.org/"
[2025-10-12 22:34:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 22:34:31] 
[2025-10-12 22:34:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 22:34:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 22:34:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 22:34:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 22:34:31] 
[2025-10-12 22:34:31] 2025-10-13 03:33:55,846 | INFO     | ***************************************
[2025-10-12 22:34:31] 2025-10-13 03:33:56,348 | INFO     | executing command: df -mP /data/boinc/slots/1
[2025-10-12 22:34:31] 2025-10-13 03:33:56,370 | INFO     | sufficient remaining disk space (408078516224 B)
[2025-10-12 22:34:31] 2025-10-13 03:33:56,370 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 22:34:31] 2025-10-13 03:33:56,370 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:34:31] 2025-10-13 03:33:56,370 | INFO     | update_server=False
[2025-10-12 22:34:31] 2025-10-13 03:33:56,370 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:34:31] 2025-10-13 03:33:56,370 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:34:31] 2025-10-13 03:33:56,370 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:34:31] 2025-10-13 03:33:56,544 | INFO     | all job control threads have been joined
[2025-10-12 22:34:31] 2025-10-13 03:33:56,804 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:34:31] 2025-10-13 03:33:56,805 | INFO     | aborting loop
[2025-10-12 22:34:31] 2025-10-13 03:33:56,850 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:34:31] 2025-10-13 03:33:57,246 | INFO     | all data control threads have been joined
[2025-10-12 22:34:31] 2025-10-13 03:33:57,371 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:34:31] 2025-10-13 03:33:57,375 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:34:31] 2025-10-13 03:33:57,549 | INFO     | [job] control thread has finished
[2025-10-12 22:34:31] 2025-10-13 03:33:57,790 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:34:31] 2025-10-13 03:33:57,809 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:34:31] 2025-10-13 03:33:57,847 | INFO     | all payload control threads have been joined
[2025-10-12 22:34:31] 2025-10-13 03:33:57,995 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:34:31] 2025-10-13 03:33:58,232 | INFO     | [job] validate thread has finished
[2025-10-12 22:34:31] 2025-10-13 03:33:58,251 | INFO     | [data] control thread has finished
[2025-10-12 22:34:31] 2025-10-13 03:33:58,322 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:34:31] 2025-10-13 03:33:58,376 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:34:31] 2025-10-13 03:33:58,451 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:34:31] 2025-10-13 03:33:58,582 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:34:31] 2025-10-13 03:33:58,668 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:34:31] 2025-10-13 03:33:58,853 | INFO     | [payload] control thread has finished
[2025-10-12 22:34:31] 2025-10-13 03:34:00,856 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:34:31] 2025-10-13 03:34:07,208 | INFO     | job.realtimelogging is not enabled
[2025-10-12 22:34:31] 2025-10-13 03:34:08,214 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:34:31] 2025-10-13 03:34:26,144 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:34:31] 2025-10-13 03:34:26,251 | INFO     | PID=2052079 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 22:34:31] 2025-10-13 03:34:26,251 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:34:31] 2025-10-13 03:34:26,251 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:34:31] 2025-10-13 03:34:26,252 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:34:31] 2025-10-13 03:34:26,311 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140471110166336)>', '<ExcThread(monitor, started 140470747371264)>']
[2025-10-12 22:34:31] 2025-10-13 03:34:27,256 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:34:31] 2025-10-13 03:34:27,256 | INFO     | [monitor] control thread has ended
[2025-10-12 22:34:31] 2025-10-13 03:34:31,335 | INFO     | all workflow threads have been joined
[2025-10-12 22:34:31] 2025-10-13 03:34:31,336 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:34:31] 2025-10-13 03:34:31,336 | INFO     | traces error code: 0
[2025-10-12 22:34:31] 2025-10-13 03:34:31,337 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:34:31] 2025-10-13 03:34:31,447 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:34:31] 2025-10-13 03:34:31,449 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:34:31] 2025-10-13 03:34:31,452 [wrapper] pilotpid: 2052079
[2025-10-12 22:34:31] 2025-10-13 03:34:31,455 [wrapper] Pilot exit status: 0
[2025-10-12 22:34:31] 2025-10-13 03:34:31,469 [wrapper] pandaids: 6839928780
[2025-10-12 22:34:31] 2025-10-13 03:34:31,498 [wrapper] cleanup supervisor_pilot 2078251 2052080
[2025-10-12 22:34:31] 2025-10-13 03:34:31,501 [wrapper] Test setup, not cleaning
[2025-10-12 22:34:31] 2025-10-13 03:34:31,504 [wrapper] apfmon messages muted
[2025-10-12 22:34:31] 2025-10-13 03:34:31,507 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:34:31] 2025-10-13 03:34:31,510 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:34:31]  *** Error codes and diagnostics ***
[2025-10-12 22:34:31]     "exeErrorCode": 0,
[2025-10-12 22:34:31]     "exeErrorDiag": "",
[2025-10-12 22:34:31]     "pilotErrorCode": 0,
[2025-10-12 22:34:31]     "pilotErrorDiag": "",
[2025-10-12 22:34:31]  *** Listing of results directory ***
[2025-10-12 22:34:31] total 409912
[2025-10-12 22:34:31] -rw-r--r-- 1 boinc boinc    557409 Oct 12 07:10 pilot3.tar.gz
[2025-10-12 22:34:31] -rw-r--r-- 1 boinc boinc      5112 Oct 12 07:15 queuedata.json
[2025-10-12 22:34:31] -rwx------ 1 boinc boinc     36292 Oct 12 07:15 runpilot2-wrapper.sh
[2025-10-12 22:34:31] -rw-r--r-- 1 boinc boinc       100 Oct 12 20:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:34:31] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 20:17 run_atlas
[2025-10-12 22:34:31] -rw-r--r-- 1 boinc boinc       105 Oct 12 20:17 job.xml
[2025-10-12 22:34:31] -rw-r--r-- 2 boinc boinc 220666605 Oct 12 20:17 EVNT.46676267._003754.pool.root.1
[2025-10-12 22:34:31] -rw-r--r-- 1 boinc boinc      9535 Oct 12 20:17 init_data.xml
[2025-10-12 22:34:31] -rw-r--r-- 2 boinc boinc    569678 Oct 12 20:17 input.tar.gz
[2025-10-12 22:34:31] drwxrwx--x 2 boinc boinc      4096 Oct 12 20:17 shared
[2025-10-12 22:34:31] -rw-r--r-- 2 boinc boinc     15120 Oct 12 20:17 start_atlas.sh
[2025-10-12 22:34:31] -rw-r--r-- 1 boinc boinc         0 Oct 12 20:17 boinc_lockfile
[2025-10-12 22:34:31] -rw-r--r-- 1 boinc boinc      2550 Oct 12 20:17 pandaJob.out
[2025-10-12 22:34:31] -rw------- 1 boinc boinc    975595 Oct 12 20:17 agis_schedconf.cvmfs.json
[2025-10-12 22:34:31] -rw------- 1 boinc boinc   1560580 Oct 12 20:17 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:34:31] drwx------ 5 boinc boinc      4096 Oct 12 20:17 pilot3
[2025-10-12 22:34:31] -rw------- 1 boinc boinc 192220472 Oct 12 22:33 HITS.46676269._077917.pool.root.1
[2025-10-12 22:34:31] -rw------- 1 boinc boinc      1014 Oct 12 22:33 memory_monitor_summary.json
[2025-10-12 22:34:31] -rw-r--r-- 1 boinc boinc       529 Oct 12 22:33 boinc_task_state.xml
[2025-10-12 22:34:31] -rw------- 1 boinc boinc    313711 Oct 12 22:33 log.46676269._077917.job.log.tgz.1
[2025-10-12 22:34:31] -rw------- 1 boinc boinc      7748 Oct 12 22:33 heartbeat.json
[2025-10-12 22:34:31] -rw-r--r-- 1 boinc boinc      8192 Oct 12 22:34 boinc_mmap_file
[2025-10-12 22:34:31] -rw-r--r-- 1 boinc boinc        27 Oct 12 22:34 wrapper_checkpoint.txt
[2025-10-12 22:34:31] -rw------- 1 boinc boinc        95 Oct 12 22:34 pilot_heartbeat.json
[2025-10-12 22:34:31] -rw------- 1 boinc boinc      4818 Oct 12 22:34 pilotlog.txt
[2025-10-12 22:34:31] -rw------- 1 boinc boinc   1166617 Oct 12 22:34 log.46676269._077917.job.log.1
[2025-10-12 22:34:31] -rw------- 1 boinc boinc       357 Oct 12 22:34 output.list
[2025-10-12 22:34:31] -rw-r--r-- 1 boinc boinc       620 Oct 12 22:34 runtime_log
[2025-10-12 22:34:31] -rw------- 1 boinc boinc   1495040 Oct 12 22:34 result.tar.gz
[2025-10-12 22:34:31] -rw-r--r-- 1 boinc boinc      8622 Oct 12 22:34 runtime_log.err
[2025-10-12 22:34:31] -rw------- 1 boinc boinc       643 Oct 12 22:34 ITIODmAAAS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQjjNDmOlIzcm.diag
[2025-10-12 22:34:31] -rw-r--r-- 1 boinc boinc     20780 Oct 12 22:34 stderr.txt
[2025-10-12 22:34:31] HITS file was successfully produced:
[2025-10-12 22:34:31] -rw------- 1 boinc boinc 192220472 Oct 12 22:33 shared/HITS.pool.root.1
[2025-10-12 22:34:31]  *** Contents of shared directory: ***
[2025-10-12 22:34:31] total 405256
[2025-10-12 22:34:31] -rw-r--r-- 2 boinc boinc 220666605 Oct 12 20:17 ATLAS.root_0
[2025-10-12 22:34:31] -rw-r--r-- 2 boinc boinc    569678 Oct 12 20:17 input.tar.gz
[2025-10-12 22:34:31] -rw-r--r-- 2 boinc boinc     15120 Oct 12 20:17 start_atlas.sh
[2025-10-12 22:34:31] -rw------- 1 boinc boinc 192220472 Oct 12 22:33 HITS.pool.root.1
[2025-10-12 22:34:31] -rw------- 1 boinc boinc   1495040 Oct 12 22:34 result.tar.gz
22:34:32 (2048253): run_atlas exited; CPU time 31238.138406
22:34:32 (2048253): called boinc_finish(0)

</stderr_txt>
]]>

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