Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:26:06 (988810): wrapper (7.7.26015): starting
15:26:06 (988810): wrapper: running run_atlas (--nthreads 11)
[2025-10-12 15:26:06] Arguments: --nthreads 11
[2025-10-12 15:26:06] Threads: 11
[2025-10-12 15:26:06] Checking for CVMFS
[2025-10-12 15:26:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:26:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:26:06] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:26:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:26:07] 2.13.2.0 4499 50686 135288 151633 3 65 25161381 40960001 8101 16776704 0 43489624 99.781 25338410 37876 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 15:26:07] CVMFS is ok
[2025-10-12 15:26:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:26:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 15:26:07] Further information can be found at the LHC@home message board.
[2025-10-12 15:26:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:26:07] Checking for apptainer binary...
[2025-10-12 15:26:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:26:07] Running /usr/bin/apptainer --version
[2025-10-12 15:26:07] apptainer version 1.4.3-1.el9
[2025-10-12 15:26:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:26:07] c-211-8.aglt2.org
[2025-10-12 15:26:07] apptainer works
[2025-10-12 15:26:07] Set ATHENA_PROC_NUMBER=11
[2025-10-12 15:26:07] Set ATHENA_CORE_NUMBER=11
[2025-10-12 15:26:07] Starting ATLAS job with PandaID=6840181738
[2025-10-12 15:26:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 17:37:42]  *** The last 200 lines of the pilot log: ***
[2025-10-12 17:37:42] 2025-10-12 21:36:53,369 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 17:37:42] 2025-10-12 21:36:53,369 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 17:37:42] 2025-10-12 21:36:53,373 | INFO     | fitting pss+swap vs Time
[2025-10-12 17:37:42] 2025-10-12 21:36:53,374 | INFO     | sum of square deviations: 650252192.0
[2025-10-12 17:37:42] 2025-10-12 21:36:53,374 | INFO     | sum of deviations: 21149207764.0
[2025-10-12 17:37:42] 2025-10-12 21:36:53,375 | INFO     | mean x: 1760301085.5
[2025-10-12 17:37:42] 2025-10-12 21:36:53,375 | INFO     | mean y: 2679779.484375
[2025-10-12 17:37:42] 2025-10-12 21:36:53,375 | INFO     | -- intersect: -57250450379.02838
[2025-10-12 17:37:42] 2025-10-12 21:36:53,375 | INFO     | intersect: -57250450379.02838
[2025-10-12 17:37:42] 2025-10-12 21:36:53,375 | INFO     | chi2: 1.8339868268598765
[2025-10-12 17:37:42] 2025-10-12 21:36:53,376 | INFO     | sum of square deviations: 576985702.0
[2025-10-12 17:37:42] 2025-10-12 21:36:53,376 | INFO     | sum of deviations: 20955693255.00001
[2025-10-12 17:37:42] 2025-10-12 21:36:53,377 | INFO     | mean x: 1760300933.0
[2025-10-12 17:37:42] 2025-10-12 21:36:53,377 | INFO     | mean y: 2679368.81300813
[2025-10-12 17:37:42] 2025-10-12 21:36:53,377 | INFO     | -- intersect: -63930146454.37927
[2025-10-12 17:37:42] 2025-10-12 21:36:53,377 | INFO     | intersect: -63930146454.37927
[2025-10-12 17:37:42] 2025-10-12 21:36:53,378 | INFO     | chi2: 1.834466607263679
[2025-10-12 17:37:42] 2025-10-12 21:36:53,378 | INFO     | current chi2=1.834466607263679 (change=-0.026160515265208323 %)
[2025-10-12 17:37:42] 2025-10-12 21:36:53,378 | INFO     | right removable region: 122
[2025-10-12 17:37:42] 2025-10-12 21:36:53,378 | INFO     | sum of square deviations: 576985702.0
[2025-10-12 17:37:42] 2025-10-12 21:36:53,379 | INFO     | sum of deviations: -4768754666.0
[2025-10-12 17:37:42] 2025-10-12 21:36:53,379 | INFO     | mean x: 1760301238.0
[2025-10-12 17:37:42] 2025-10-12 21:36:53,379 | INFO     | mean y: 2733162.9105691058
[2025-10-12 17:37:42] 2025-10-12 21:36:53,379 | INFO     | -- intersect: 14551524776.256433
[2025-10-12 17:37:42] 2025-10-12 21:36:53,379 | INFO     | intersect: 14551524776.256433
[2025-10-12 17:37:42] 2025-10-12 21:36:53,380 | INFO     | chi2: 0.10920518655423649
[2025-10-12 17:37:42] 2025-10-12 21:36:53,380 | INFO     | current chi2=0.10920518655423649 (change=94.04547595681395 %)
[2025-10-12 17:37:42] 2025-10-12 21:36:53,380 | INFO     | sum of square deviations: 509440249.5
[2025-10-12 17:37:42] 2025-10-12 21:36:53,381 | INFO     | sum of deviations: -9531336345.5
[2025-10-12 17:37:42] 2025-10-12 21:36:53,381 | INFO     | mean x: 1760301390.5
[2025-10-12 17:37:42] 2025-10-12 21:36:53,381 | INFO     | mean y: 2743753.36440678
[2025-10-12 17:37:42] 2025-10-12 21:36:53,381 | INFO     | -- intersect: 32936978217.119392
[2025-10-12 17:37:42] 2025-10-12 21:36:53,382 | INFO     | intersect: 32936978217.119392
[2025-10-12 17:37:42] 2025-10-12 21:36:53,382 | INFO     | chi2: 0.022481205745276397
[2025-10-12 17:37:42] 2025-10-12 21:36:53,382 | INFO     | current chi2=0.022481205745276397 (change=79.41379301237569 %)
[2025-10-12 17:37:42] 2025-10-12 21:36:53,382 | INFO     | sum of square deviations: 447383272.0
[2025-10-12 17:37:42] 2025-10-12 21:36:53,383 | INFO     | sum of deviations: -9124928450.999998
[2025-10-12 17:37:42] 2025-10-12 21:36:53,383 | INFO     | mean x: 1760301543.0
[2025-10-12 17:37:42] 2025-10-12 21:36:53,383 | INFO     | mean y: 2742741.8761061947
[2025-10-12 17:37:42] 2025-10-12 21:36:53,384 | INFO     | -- intersect: 35906243470.1284
[2025-10-12 17:37:42] 2025-10-12 21:36:53,384 | INFO     | intersect: 35906243470.1284
[2025-10-12 17:37:42] 2025-10-12 21:36:53,384 | INFO     | chi2: 0.021046643443135865
[2025-10-12 17:37:42] 2025-10-12 21:36:53,384 | INFO     | current chi2=0.021046643443135865 (change=6.3811626404511355 %)
[2025-10-12 17:37:42] 2025-10-12 21:36:53,384 | INFO     | left removable region: 30
[2025-10-12 17:37:42] 2025-10-12 21:36:53,385 | INFO     | sum of square deviations: 241429643.0
[2025-10-12 17:37:42] 2025-10-12 21:36:53,385 | INFO     | sum of deviations: -4677564759.499998
[2025-10-12 17:37:42] 2025-10-12 21:36:53,385 | INFO     | mean x: 1760301817.5
[2025-10-12 17:37:42] 2025-10-12 21:36:53,385 | INFO     | mean y: 2734009.2717391304
[2025-10-12 17:37:42] 2025-10-12 21:36:53,386 | INFO     | -- intersect: 34107600525.69117
[2025-10-12 17:37:42] 2025-10-12 21:36:53,386 | INFO     | intersect: 34107600525.69117
[2025-10-12 17:37:42] 2025-10-12 21:36:53,386 | INFO     | chi2: 0.01999829723102195
[2025-10-12 17:37:42] 2025-10-12 21:36:53,386 | INFO     | -- intersect: 34107600525.69117
[2025-10-12 17:37:42] 2025-10-12 21:36:53,386 | INFO     | current memory leak: -19.37 B/s (using 92 data points, chi2=0.02)
[2025-10-12 17:37:42] 2025-10-12 21:36:53,387 | INFO     | could have reported an average CPU frequency of 2482 MHz (8 samples)
[2025-10-12 17:37:42] 2025-10-12 21:36:53,387 | INFO     | ..............................
[2025-10-12 17:37:42] 2025-10-12 21:36:53,387 | INFO     | . Timing measurements:
[2025-10-12 17:37:42] 2025-10-12 21:36:53,388 | INFO     | . get job = 0 s
[2025-10-12 17:37:42] 2025-10-12 21:36:53,388 | INFO     | . initial setup = 3 s
[2025-10-12 17:37:42] 2025-10-12 21:36:53,388 | INFO     | . payload setup = 7 s
[2025-10-12 17:37:42] 2025-10-12 21:36:53,388 | INFO     | . stage-in = 0 s
[2025-10-12 17:37:42] 2025-10-12 21:36:53,388 | INFO     | . payload execution = 7791 s
[2025-10-12 17:37:42] 2025-10-12 21:36:53,388 | INFO     | . stage-out = 1 s
[2025-10-12 17:37:42] 2025-10-12 21:36:53,388 | INFO     | . log creation = 0 s
[2025-10-12 17:37:42] 2025-10-12 21:36:53,388 | INFO     | ..............................
[2025-10-12 17:37:42] 2025-10-12 21:36:53,955 | INFO     | time since job start (7831s) is within the limit (172800.0s)
[2025-10-12 17:37:42] 2025-10-12 21:36:54,000 | INFO     | 
[2025-10-12 17:37:42] 2025-10-12 21:36:54,000 | INFO     | job summary report
[2025-10-12 17:37:42] 2025-10-12 21:36:54,000 | INFO     | --------------------------------------------------
[2025-10-12 17:37:42] 2025-10-12 21:36:54,000 | INFO     | PanDA job id: 6840181738
[2025-10-12 17:37:42] 2025-10-12 21:36:54,000 | INFO     | task id: 46676269
[2025-10-12 17:37:42] 2025-10-12 21:36:54,001 | INFO     | errors: (none)
[2025-10-12 17:37:42] 2025-10-12 21:36:54,001 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 17:37:42] 2025-10-12 21:36:54,001 | INFO     | pilot state: finished 
[2025-10-12 17:37:42] 2025-10-12 21:36:54,001 | INFO     | transexitcode: 0
[2025-10-12 17:37:42] 2025-10-12 21:36:54,001 | INFO     | exeerrorcode: 0
[2025-10-12 17:37:42] 2025-10-12 21:36:54,001 | INFO     | exeerrordiag: 
[2025-10-12 17:37:42] 2025-10-12 21:36:54,001 | INFO     | exitcode: 0
[2025-10-12 17:37:42] 2025-10-12 21:36:54,001 | INFO     | exitmsg: OK
[2025-10-12 17:37:42] 2025-10-12 21:36:54,001 | INFO     | cpuconsumptiontime: 59814 s
[2025-10-12 17:37:42] 2025-10-12 21:36:54,002 | INFO     | nevents: 400
[2025-10-12 17:37:42] 2025-10-12 21:36:54,002 | INFO     | neventsw: 0
[2025-10-12 17:37:42] 2025-10-12 21:36:54,002 | INFO     | pid: 1000405
[2025-10-12 17:37:42] 2025-10-12 21:36:54,002 | INFO     | pgrp: 1000405
[2025-10-12 17:37:42] 2025-10-12 21:36:54,002 | INFO     | corecount: 11
[2025-10-12 17:37:42] 2025-10-12 21:36:54,002 | INFO     | event service: False
[2025-10-12 17:37:42] 2025-10-12 21:36:54,002 | INFO     | sizes: {0: 2348855, 1: 2348855, 5: 2349145, 12: 2349201, 7802: 2376853, 7804: 2385851, 7807: 2386035, 7814: 2386229}
[2025-10-12 17:37:42] 2025-10-12 21:36:54,002 | INFO     | --------------------------------------------------
[2025-10-12 17:37:42] 2025-10-12 21:36:54,002 | INFO     | 
[2025-10-12 17:37:42] 2025-10-12 21:36:54,003 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 17:37:42] 2025-10-12 21:36:54,026 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 17:37:42] 2025-10-12 21:36:54,027 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 17:37:42] 2025-10-12 21:36:54,027 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 17:37:42] 2025-10-12 21:36:54,027 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 17:37:42] 2025-10-12 21:36:54,027 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 17:37:42] 2025-10-12 21:36:54,027 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 17:37:42] 2025-10-12 21:36:54,027 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 17:37:42] 2025-10-12 21:36:54,028 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 17:37:42] 2025-10-12 21:36:54,028 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 17:37:42] 2025-10-12 21:36:54,028 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 17:37:42] 2025-10-12 21:36:54,028 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 17:37:42] 2025-10-12 21:36:54,028 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 17:37:42] 2025-10-12 21:36:54,028 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 17:37:42] 2025-10-12 21:36:54,028 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 17:37:42] 2025-10-12 21:36:54,029 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 17:37:42] 2025-10-12 21:36:54,029 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 17:37:42] 2025-10-12 21:36:54,029 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 17:37:42] 2025-10-12 21:36:54,029 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 17:37:42] 2025-10-12 21:36:54,029 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 17:37:42] 2025-10-12 21:36:54,029 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 17:37:42] 2025-10-12 21:36:54,030 | INFO     | job 6840181738 has completed (purged errors)
[2025-10-12 17:37:42] 2025-10-12 21:36:54,030 | INFO     | overall cleanup function is called
[2025-10-12 17:37:42] 2025-10-12 21:36:55,039 | INFO     | --- collectZombieJob: --- 10, [1000405]
[2025-10-12 17:37:42] 2025-10-12 21:36:55,039 | INFO     | zombie collector waiting for pid 1000405
[2025-10-12 17:37:42] 2025-10-12 21:36:55,039 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 17:37:42] 2025-10-12 21:36:55,040 | INFO     | collected zombie processes
[2025-10-12 17:37:42] 2025-10-12 21:36:55,040 | INFO     | will attempt to kill all subprocesses of pid=1000405
[2025-10-12 17:37:42] 2025-10-12 21:36:55,364 | INFO     | process IDs to be killed: [1000405] (in reverse order)
[2025-10-12 17:37:42] 2025-10-12 21:36:55,457 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 17:37:42] 2025-10-12 21:36:55,458 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 17:37:42] 2025-10-12 21:36:55,470 | INFO     | did not find any defunct processes belonging to 1000405
[2025-10-12 17:37:42] 2025-10-12 21:36:55,483 | INFO     | did not find any defunct processes belonging to 1000405
[2025-10-12 17:37:42] 2025-10-12 21:36:55,483 | INFO     | ready for new job
[2025-10-12 17:37:42] 2025-10-12 21:36:55,483 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 17:37:42] 2025-10-12 21:36:55,486 | INFO     | ***************************************
[2025-10-12 17:37:42] 2025-10-12 21:36:55,486 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 17:37:42] 2025-10-12 21:36:55,486 | INFO     | ***************************************
[2025-10-12 17:37:42] 2025-10-12 21:36:55,487 | INFO     | 
[2025-10-12 17:37:42] 2025-10-12 21:36:55,490 | INFO     | architecture information:
[2025-10-12 17:37:42] 2025-10-12 21:36:55,491 | INFO     | executing command: cat /etc/os-release
[2025-10-12 17:37:42] 2025-10-12 21:36:55,510 | INFO     | cat /etc/os-release:
[2025-10-12 17:37:42] NAME="CentOS Linux"
[2025-10-12 17:37:42] VERSION="7 (Core)"
[2025-10-12 17:37:42] ID="centos"
[2025-10-12 17:37:42] ID_LIKE="rhel fedora"
[2025-10-12 17:37:42] VERSION_ID="7"
[2025-10-12 17:37:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 17:37:42] ANSI_COLOR="0;31"
[2025-10-12 17:37:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 17:37:42] HOME_URL="https://www.centos.org/"
[2025-10-12 17:37:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 17:37:42] 
[2025-10-12 17:37:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 17:37:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 17:37:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 17:37:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 17:37:42] 
[2025-10-12 17:37:42] 2025-10-12 21:36:55,511 | INFO     | ***************************************
[2025-10-12 17:37:42] 2025-10-12 21:36:56,013 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 17:37:42] 2025-10-12 21:36:56,032 | INFO     | sufficient remaining disk space (63190335488 B)
[2025-10-12 17:37:42] 2025-10-12 21:36:56,032 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 17:37:42] 2025-10-12 21:36:56,033 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 17:37:42] 2025-10-12 21:36:56,033 | INFO     | update_server=False
[2025-10-12 17:37:42] 2025-10-12 21:36:56,033 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 17:37:42] 2025-10-12 21:36:56,039 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 17:37:42] 2025-10-12 21:36:56,246 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:37:42] 2025-10-12 21:36:56,247 | INFO     | aborting loop
[2025-10-12 17:37:42] 2025-10-12 21:36:56,477 | INFO     | all job control threads have been joined
[2025-10-12 17:37:42] 2025-10-12 21:36:56,777 | INFO     | all data control threads have been joined
[2025-10-12 17:37:42] 2025-10-12 21:36:57,001 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 17:37:42] 2025-10-12 21:36:57,038 | INFO     | [job] retrieve thread has finished
[2025-10-12 17:37:42] 2025-10-12 21:36:57,252 | INFO     | [job] job monitor thread has finished
[2025-10-12 17:37:42] 2025-10-12 21:36:57,367 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 17:37:42] 2025-10-12 21:36:57,445 | INFO     | all payload control threads have been joined
[2025-10-12 17:37:42] 2025-10-12 21:36:57,482 | INFO     | [job] control thread has finished
[2025-10-12 17:37:42] 2025-10-12 21:36:57,508 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 17:37:42] 2025-10-12 21:36:57,520 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 17:37:42] 2025-10-12 21:36:57,539 | INFO     | [job] validate thread has finished
[2025-10-12 17:37:42] 2025-10-12 21:36:57,782 | INFO     | [data] control thread has finished
[2025-10-12 17:37:42] 2025-10-12 21:36:57,855 | INFO     | [data] copytool_in thread has finished
[2025-10-12 17:37:42] 2025-10-12 21:36:58,044 | INFO     | [data] copytool_out thread has finished
[2025-10-12 17:37:42] 2025-10-12 21:36:58,136 | INFO     | [payload] failed_post thread has finished
[2025-10-12 17:37:42] 2025-10-12 21:36:58,387 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 17:37:42] 2025-10-12 21:36:58,450 | INFO     | [payload] control thread has finished
[2025-10-12 17:37:42] 2025-10-12 21:36:58,519 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:37:42] 2025-10-12 21:36:58,563 | INFO     | [payload] validate_post thread has finished
[2025-10-12 17:37:42] 2025-10-12 21:36:59,524 | INFO     | [job] queue monitor thread has finished
[2025-10-12 17:37:42] 2025-10-12 21:37:01,006 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 17:37:42] 2025-10-12 21:37:27,461 | INFO     | PID=992474 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 17:37:42] 2025-10-12 21:37:27,462 | INFO     | .. there are 9 such processes running
[2025-10-12 17:37:42] 2025-10-12 21:37:27,462 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 17:37:42] 2025-10-12 21:37:27,462 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 17:37:42] 2025-10-12 21:37:27,462 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 17:37:42] 2025-10-12 21:37:35,533 | INFO     | [monitor] cgroup control has ended
[2025-10-12 17:37:42] 2025-10-12 21:37:37,414 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140040597907264)>', '<ExcThread(monitor, started 140039883319040)>']
[2025-10-12 17:37:42] 2025-10-12 21:37:37,507 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 17:37:42] 2025-10-12 21:37:37,507 | INFO     | [monitor] control thread has ended
[2025-10-12 17:37:42] 2025-10-12 21:37:42,439 | INFO     | all workflow threads have been joined
[2025-10-12 17:37:42] 2025-10-12 21:37:42,439 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 17:37:42] 2025-10-12 21:37:42,439 | INFO     | traces error code: 0
[2025-10-12 17:37:42] 2025-10-12 21:37:42,440 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 17:37:42] 2025-10-12 21:37:42,657 [wrapper] ==== pilot stdout END ====
[2025-10-12 17:37:42] 2025-10-12 21:37:42,660 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 17:37:42] 2025-10-12 21:37:42,663 [wrapper] pilotpid: 992474
[2025-10-12 17:37:42] 2025-10-12 21:37:42,666 [wrapper] Pilot exit status: 0
[2025-10-12 17:37:42] 2025-10-12 21:37:42,679 [wrapper] pandaids: 6840181738
[2025-10-12 17:37:42] 2025-10-12 21:37:42,740 [wrapper] cleanup supervisor_pilot 1157146 992475
[2025-10-12 17:37:42] 2025-10-12 21:37:42,743 [wrapper] Test setup, not cleaning
[2025-10-12 17:37:42] 2025-10-12 21:37:42,747 [wrapper] apfmon messages muted
[2025-10-12 17:37:42] 2025-10-12 21:37:42,749 [wrapper] ==== wrapper stdout END ====
[2025-10-12 17:37:42] 2025-10-12 21:37:42,752 [wrapper] ==== wrapper stderr END ====
[2025-10-12 17:37:42]  *** Error codes and diagnostics ***
[2025-10-12 17:37:42]     "exeErrorCode": 0,
[2025-10-12 17:37:42]     "exeErrorDiag": "",
[2025-10-12 17:37:42]     "pilotErrorCode": 0,
[2025-10-12 17:37:42]     "pilotErrorDiag": "",
[2025-10-12 17:37:42]  *** Listing of results directory ***
[2025-10-12 17:37:42] total 414156
[2025-10-12 17:37:42] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 09:55 pilot3.tar.gz
[2025-10-12 17:37:42] -rwx------. 1 boincer umatlas     36292 Oct 12 10:22 runpilot2-wrapper.sh
[2025-10-12 17:37:42] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 10:22 queuedata.json
[2025-10-12 17:37:42] -rw-r--r--. 1 boincer umatlas       100 Oct 12 15:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 17:37:42] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 15:26 run_atlas
[2025-10-12 17:37:42] -rw-r--r--. 1 boincer umatlas       105 Oct 12 15:26 job.xml
[2025-10-12 17:37:42] -rw-r--r--. 2 boincer umatlas 222034270 Oct 12 15:26 EVNT.46676267._004230.pool.root.1
[2025-10-12 17:37:42] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:26 start_atlas.sh
[2025-10-12 17:37:42] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 15:26 shared
[2025-10-12 17:37:42] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 15:26 input.tar.gz
[2025-10-12 17:37:42] -rw-r--r--. 1 boincer umatlas         0 Oct 12 15:26 boinc_lockfile
[2025-10-12 17:37:42] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 15:26 pandaJob.out
[2025-10-12 17:37:42] -rw-------. 1 boincer umatlas    975528 Oct 12 15:26 agis_schedconf.cvmfs.json
[2025-10-12 17:37:42] -rw-------. 1 boincer umatlas   1560580 Oct 12 15:26 agis_ddmendpoints.agis.ALL.json
[2025-10-12 17:37:42] drwx------. 5 boincer umatlas      4096 Oct 12 15:26 pilot3
[2025-10-12 17:37:42] -rw-r--r--. 1 boincer umatlas      6612 Oct 12 17:30 init_data.xml
[2025-10-12 17:37:42] -rw-------. 1 boincer umatlas 195124611 Oct 12 17:36 HITS.46676269._080613.pool.root.1
[2025-10-12 17:37:42] -rw-r--r--. 1 boincer umatlas       529 Oct 12 17:36 boinc_task_state.xml
[2025-10-12 17:37:42] -rw-------. 1 boincer umatlas      1044 Oct 12 17:36 memory_monitor_summary.json
[2025-10-12 17:37:42] -rw-------. 1 boincer umatlas        95 Oct 12 17:36 pilot_heartbeat.json
[2025-10-12 17:37:42] -rw-------. 1 boincer umatlas    408577 Oct 12 17:36 log.46676269._080613.job.log.tgz.1
[2025-10-12 17:37:42] -rw-------. 1 boincer umatlas      7828 Oct 12 17:36 heartbeat.json
[2025-10-12 17:37:42] -rw-r--r--. 1 boincer umatlas        27 Oct 12 17:37 wrapper_checkpoint.txt
[2025-10-12 17:37:42] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 17:37 boinc_mmap_file
[2025-10-12 17:37:42] -rw-------. 1 boincer umatlas      4822 Oct 12 17:37 pilotlog.txt
[2025-10-12 17:37:42] -rw-------. 1 boincer umatlas   1108011 Oct 12 17:37 log.46676269._080613.job.log.1
[2025-10-12 17:37:42] -rw-------. 1 boincer umatlas       357 Oct 12 17:37 output.list
[2025-10-12 17:37:42] -rw-r--r--. 1 boincer umatlas       620 Oct 12 17:37 runtime_log
[2025-10-12 17:37:42] -rw-------. 1 boincer umatlas   1536000 Oct 12 17:37 result.tar.gz
[2025-10-12 17:37:42] -rw-r--r--. 1 boincer umatlas      8700 Oct 12 17:37 runtime_log.err
[2025-10-12 17:37:42] -rw-------. 1 boincer umatlas       652 Oct 12 17:37 JFYNDmZ9BS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmf5TMDm29Y0pn.diag
[2025-10-12 17:37:42] -rw-r--r--. 1 boincer umatlas     20910 Oct 12 17:37 stderr.txt
[2025-10-12 17:37:42] HITS file was successfully produced:
[2025-10-12 17:37:42] -rw-------. 1 boincer umatlas 195124611 Oct 12 17:36 shared/HITS.pool.root.1
[2025-10-12 17:37:42]  *** Contents of shared directory: ***
[2025-10-12 17:37:42] total 409468
[2025-10-12 17:37:42] -rw-r--r--. 2 boincer umatlas 222034270 Oct 12 15:26 ATLAS.root_0
[2025-10-12 17:37:42] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:26 start_atlas.sh
[2025-10-12 17:37:42] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 15:26 input.tar.gz
[2025-10-12 17:37:42] -rw-------. 1 boincer umatlas 195124611 Oct 12 17:36 HITS.pool.root.1
[2025-10-12 17:37:42] -rw-------. 1 boincer umatlas   1536000 Oct 12 17:37 result.tar.gz
17:37:44 (988810): run_atlas exited; CPU time 59917.957878
17:37:44 (988810): called boinc_finish(0)

</stderr_txt>
]]>

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