Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
15:33:48 (1984106): wrapper (7.7.26015): starting
15:33:48 (1984106): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 15:33:48] Arguments: --nthreads 4
[2025-10-12 15:33:48] Threads: 4
[2025-10-12 15:33:48] Checking for CVMFS
[2025-10-12 15:33:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:33:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:33:48] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:33:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:33:48] 2.11.3.0 4671 10101 100988 151636 3 57 2291821 4194305 0 130560 0 4563061 99.984 413966 777 http://s1unl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.59.5:3128 1
[2025-10-12 15:33:48] CVMFS is ok
[2025-10-12 15:33:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:33:48] Checking for apptainer binary...
[2025-10-12 15:33:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:33:48] Running /usr/bin/apptainer --version
[2025-10-12 15:33:48] apptainer version 1.4.2-1.fc42
[2025-10-12 15:33:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:33:48] R7OwensSE
[2025-10-12 15:33:48] apptainer works
[2025-10-12 15:33:48] Set ATHENA_PROC_NUMBER=4
[2025-10-12 15:33:48] Set ATHENA_CORE_NUMBER=4
[2025-10-12 15:33:48] Starting ATLAS job with PandaID=6840181823
[2025-10-12 15:33:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/data/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 17:57:20]  *** The last 200 lines of the pilot log: ***
[2025-10-12 17:57:20] 2025-10-12 22:56:25,410 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:57:20] 2025-10-12 22:56:25,970 | INFO     | time since job start (8545s) is within the limit (172800.0s)
[2025-10-12 17:57:20] 2025-10-12 22:56:25,977 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 17:57:20] 2025-10-12 22:56:25,980 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3396.1515000000004
[2025-10-12 17:57:20] 2025-10-12 22:56:25,983 | INFO     | using path: /data/boinc/slots/1/PanDA_Pilot-6840181823/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 17:57:20] 2025-10-12 22:56:25,983 | INFO     | extracted standard info from prmon json
[2025-10-12 17:57:20] 2025-10-12 22:56:25,983 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 17:57:20] 2025-10-12 22:56:25,983 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 17:57:20] 2025-10-12 22:56:25,984 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 17:57:20] 2025-10-12 22:56:25,984 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 17:57:20] 2025-10-12 22:56:25,986 | INFO     | fitting pss+swap vs Time
[2025-10-12 17:57:20] 2025-10-12 22:56:25,986 | INFO     | sum of square deviations: 850825255.0
[2025-10-12 17:57:20] 2025-10-12 22:56:25,987 | INFO     | sum of deviations: -33887146756.0
[2025-10-12 17:57:20] 2025-10-12 22:56:25,987 | INFO     | mean x: 1760305504.5
[2025-10-12 17:57:20] 2025-10-12 22:56:25,987 | INFO     | mean y: 2457141.9714285713
[2025-10-12 17:57:20] 2025-10-12 22:56:25,987 | INFO     | -- intersect: 70112894762.19243
[2025-10-12 17:57:20] 2025-10-12 22:56:25,987 | INFO     | intersect: 70112894762.19243
[2025-10-12 17:57:20] 2025-10-12 22:56:25,987 | INFO     | chi2: 1.535880238343601
[2025-10-12 17:57:20] 2025-10-12 22:56:25,988 | INFO     | sum of square deviations: 762879420.0
[2025-10-12 17:57:20] 2025-10-12 22:56:25,988 | INFO     | sum of deviations: -31853896098.0
[2025-10-12 17:57:20] 2025-10-12 22:56:25,988 | INFO     | mean x: 1760305352.0
[2025-10-12 17:57:20] 2025-10-12 22:56:25,989 | INFO     | mean y: 2460669.407407407
[2025-10-12 17:57:20] 2025-10-12 22:56:25,989 | INFO     | -- intersect: 73503701249.94543
[2025-10-12 17:57:20] 2025-10-12 22:56:25,989 | INFO     | intersect: 73503701249.94543
[2025-10-12 17:57:20] 2025-10-12 22:56:25,989 | INFO     | chi2: 1.5256980357777394
[2025-10-12 17:57:20] 2025-10-12 22:56:25,989 | INFO     | current chi2=1.5256980357777394 (change=0.662955503408439 %)
[2025-10-12 17:57:20] 2025-10-12 22:56:25,989 | INFO     | right removable region: 134
[2025-10-12 17:57:20] 2025-10-12 22:56:25,989 | INFO     | sum of square deviations: 762879420.0
[2025-10-12 17:57:20] 2025-10-12 22:56:25,990 | INFO     | sum of deviations: -47593093284.0
[2025-10-12 17:57:20] 2025-10-12 22:56:25,990 | INFO     | mean x: 1760305657.0
[2025-10-12 17:57:20] 2025-10-12 22:56:25,990 | INFO     | mean y: 2480239.6814814815
[2025-10-12 17:57:20] 2025-10-12 22:56:25,990 | INFO     | -- intersect: 109821134597.86815
[2025-10-12 17:57:20] 2025-10-12 22:56:25,990 | INFO     | intersect: 109821134597.86815
[2025-10-12 17:57:20] 2025-10-12 22:56:25,990 | INFO     | chi2: 0.28278503408044403
[2025-10-12 17:57:20] 2025-10-12 22:56:25,990 | INFO     | current chi2=0.28278503408044403 (change=81.58808043617913 %)
[2025-10-12 17:57:20] 2025-10-12 22:56:25,991 | INFO     | sum of square deviations: 681212772.5
[2025-10-12 17:57:20] 2025-10-12 22:56:25,991 | INFO     | sum of deviations: -42347391207.99999
[2025-10-12 17:57:20] 2025-10-12 22:56:25,991 | INFO     | mean x: 1760305809.5
[2025-10-12 17:57:20] 2025-10-12 22:56:25,991 | INFO     | mean y: 2470432.6
[2025-10-12 17:57:20] 2025-10-12 22:56:25,991 | INFO     | -- intersect: 109431362211.94727
[2025-10-12 17:57:20] 2025-10-12 22:56:25,992 | INFO     | intersect: 109431362211.94727
[2025-10-12 17:57:20] 2025-10-12 22:56:25,992 | INFO     | chi2: 0.2825259237006017
[2025-10-12 17:57:20] 2025-10-12 22:56:25,992 | INFO     | current chi2=0.2825259237006017 (change=0.09162803847979516 %)
[2025-10-12 17:57:20] 2025-10-12 22:56:25,992 | INFO     | left removable region: 20
[2025-10-12 17:57:20] 2025-10-12 22:56:25,992 | INFO     | sum of square deviations: 459366752.5
[2025-10-12 17:57:20] 2025-10-12 22:56:25,993 | INFO     | sum of deviations: -29005649480.500004
[2025-10-12 17:57:20] 2025-10-12 22:56:25,993 | INFO     | mean x: 1760305931.5
[2025-10-12 17:57:20] 2025-10-12 22:56:25,993 | INFO     | mean y: 2450712.3421052634
[2025-10-12 17:57:20] 2025-10-12 22:56:25,993 | INFO     | -- intersect: 111152891073.24751
[2025-10-12 17:57:20] 2025-10-12 22:56:25,993 | INFO     | intersect: 111152891073.24751
[2025-10-12 17:57:20] 2025-10-12 22:56:25,993 | INFO     | chi2: 0.2577632335938696
[2025-10-12 17:57:20] 2025-10-12 22:56:25,993 | INFO     | -- intersect: 111152891073.24751
[2025-10-12 17:57:20] 2025-10-12 22:56:25,993 | INFO     | current memory leak: -63.14 B/s (using 114 data points, chi2=0.26)
[2025-10-12 17:57:20] 2025-10-12 22:56:25,994 | INFO     | could have reported an average CPU frequency of 3415 MHz (8 samples)
[2025-10-12 17:57:20] 2025-10-12 22:56:25,994 | INFO     | ..............................
[2025-10-12 17:57:20] 2025-10-12 22:56:25,994 | INFO     | . Timing measurements:
[2025-10-12 17:57:20] 2025-10-12 22:56:25,994 | INFO     | . get job = 0 s
[2025-10-12 17:57:20] 2025-10-12 22:56:25,994 | INFO     | . initial setup = 3 s
[2025-10-12 17:57:20] 2025-10-12 22:56:25,994 | INFO     | . payload setup = 5 s
[2025-10-12 17:57:20] 2025-10-12 22:56:25,994 | INFO     | . stage-in = 0 s
[2025-10-12 17:57:20] 2025-10-12 22:56:25,994 | INFO     | . payload execution = 8511 s
[2025-10-12 17:57:20] 2025-10-12 22:56:25,994 | INFO     | . stage-out = 0 s
[2025-10-12 17:57:20] 2025-10-12 22:56:25,994 | INFO     | . log creation = 0 s
[2025-10-12 17:57:20] 2025-10-12 22:56:25,994 | INFO     | ..............................
[2025-10-12 17:57:20] 2025-10-12 22:56:26,066 | INFO     | 
[2025-10-12 17:57:20] 2025-10-12 22:56:26,067 | INFO     | job summary report
[2025-10-12 17:57:20] 2025-10-12 22:56:26,067 | INFO     | --------------------------------------------------
[2025-10-12 17:57:20] 2025-10-12 22:56:26,067 | INFO     | PanDA job id: 6840181823
[2025-10-12 17:57:20] 2025-10-12 22:56:26,067 | INFO     | task id: 46676269
[2025-10-12 17:57:20] 2025-10-12 22:56:26,067 | INFO     | errors: (none)
[2025-10-12 17:57:20] 2025-10-12 22:56:26,067 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 17:57:20] 2025-10-12 22:56:26,067 | INFO     | pilot state: finished 
[2025-10-12 17:57:20] 2025-10-12 22:56:26,067 | INFO     | transexitcode: 0
[2025-10-12 17:57:20] 2025-10-12 22:56:26,067 | INFO     | exeerrorcode: 0
[2025-10-12 17:57:20] 2025-10-12 22:56:26,067 | INFO     | exeerrordiag: 
[2025-10-12 17:57:20] 2025-10-12 22:56:26,067 | INFO     | exitcode: 0
[2025-10-12 17:57:20] 2025-10-12 22:56:26,067 | INFO     | exitmsg: OK
[2025-10-12 17:57:20] 2025-10-12 22:56:26,068 | INFO     | cpuconsumptiontime: 33016 s
[2025-10-12 17:57:20] 2025-10-12 22:56:26,068 | INFO     | nevents: 400
[2025-10-12 17:57:20] 2025-10-12 22:56:26,068 | INFO     | neventsw: 0
[2025-10-12 17:57:20] 2025-10-12 22:56:26,068 | INFO     | pid: 1994465
[2025-10-12 17:57:20] 2025-10-12 22:56:26,068 | INFO     | pgrp: 1994465
[2025-10-12 17:57:20] 2025-10-12 22:56:26,068 | INFO     | corecount: 4
[2025-10-12 17:57:20] 2025-10-12 22:56:26,068 | INFO     | event service: False
[2025-10-12 17:57:20] 2025-10-12 22:56:26,068 | INFO     | sizes: {0: 2348854, 4: 2349116, 11: 2349144, 8520: 2377161, 8521: 2377160, 8522: 2386208, 8524: 2386392, 8530: 2386586}
[2025-10-12 17:57:20] 2025-10-12 22:56:26,068 | INFO     | --------------------------------------------------
[2025-10-12 17:57:20] 2025-10-12 22:56:26,068 | INFO     | 
[2025-10-12 17:57:20] 2025-10-12 22:56:26,068 | INFO     | executing command: ls -lF /data/boinc/slots/1
[2025-10-12 17:57:20] 2025-10-12 22:56:26,095 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 17:57:20] 2025-10-12 22:56:26,095 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 17:57:20] 2025-10-12 22:56:26,096 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 17:57:20] 2025-10-12 22:56:26,096 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 17:57:20] 2025-10-12 22:56:26,096 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 17:57:20] 2025-10-12 22:56:26,096 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 17:57:20] 2025-10-12 22:56:26,096 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 17:57:20] 2025-10-12 22:56:26,096 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 17:57:20] 2025-10-12 22:56:26,096 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 17:57:20] 2025-10-12 22:56:26,096 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 17:57:20] 2025-10-12 22:56:26,096 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 17:57:20] 2025-10-12 22:56:26,096 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 17:57:20] 2025-10-12 22:56:26,096 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 17:57:20] 2025-10-12 22:56:26,096 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 17:57:20] 2025-10-12 22:56:26,096 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 17:57:20] 2025-10-12 22:56:26,097 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 17:57:20] 2025-10-12 22:56:26,097 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 17:57:20] 2025-10-12 22:56:26,097 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 17:57:20] 2025-10-12 22:56:26,097 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 17:57:20] 2025-10-12 22:56:26,097 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 17:57:20] 2025-10-12 22:56:26,097 | INFO     | job 6840181823 has completed (purged errors)
[2025-10-12 17:57:20] 2025-10-12 22:56:26,097 | INFO     | overall cleanup function is called
[2025-10-12 17:57:20] 2025-10-12 22:56:27,104 | INFO     | --- collectZombieJob: --- 10, [1994465]
[2025-10-12 17:57:20] 2025-10-12 22:56:27,104 | INFO     | zombie collector waiting for pid 1994465
[2025-10-12 17:57:20] 2025-10-12 22:56:27,105 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 17:57:20] 2025-10-12 22:56:27,105 | INFO     | collected zombie processes
[2025-10-12 17:57:20] 2025-10-12 22:56:27,105 | INFO     | will attempt to kill all subprocesses of pid=1994465
[2025-10-12 17:57:20] 2025-10-12 22:56:27,207 | INFO     | process IDs to be killed: [1994465] (in reverse order)
[2025-10-12 17:57:20] 2025-10-12 22:56:27,262 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 17:57:20] 2025-10-12 22:56:27,263 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 17:57:20] 2025-10-12 22:56:27,266 | INFO     | did not find any defunct processes belonging to 1994465
[2025-10-12 17:57:20] 2025-10-12 22:56:27,269 | INFO     | did not find any defunct processes belonging to 1994465
[2025-10-12 17:57:20] 2025-10-12 22:56:27,269 | INFO     | ready for new job
[2025-10-12 17:57:20] 2025-10-12 22:56:27,269 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 17:57:20] 2025-10-12 22:56:27,271 | INFO     | ***************************************
[2025-10-12 17:57:20] 2025-10-12 22:56:27,271 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 17:57:20] 2025-10-12 22:56:27,271 | INFO     | ***************************************
[2025-10-12 17:57:20] 2025-10-12 22:56:27,271 | INFO     | 
[2025-10-12 17:57:20] 2025-10-12 22:56:27,272 | INFO     | architecture information:
[2025-10-12 17:57:20] 2025-10-12 22:56:27,273 | INFO     | executing command: cat /etc/os-release
[2025-10-12 17:57:20] 2025-10-12 22:56:27,289 | INFO     | cat /etc/os-release:
[2025-10-12 17:57:20] NAME="CentOS Linux"
[2025-10-12 17:57:20] VERSION="7 (Core)"
[2025-10-12 17:57:20] ID="centos"
[2025-10-12 17:57:20] ID_LIKE="rhel fedora"
[2025-10-12 17:57:20] VERSION_ID="7"
[2025-10-12 17:57:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 17:57:20] ANSI_COLOR="0;31"
[2025-10-12 17:57:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 17:57:20] HOME_URL="https://www.centos.org/"
[2025-10-12 17:57:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 17:57:20] 
[2025-10-12 17:57:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 17:57:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 17:57:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 17:57:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 17:57:20] 
[2025-10-12 17:57:20] 2025-10-12 22:56:27,289 | INFO     | ***************************************
[2025-10-12 17:57:20] 2025-10-12 22:56:27,792 | INFO     | executing command: df -mP /data/boinc/slots/1
[2025-10-12 17:57:20] 2025-10-12 22:56:27,808 | INFO     | sufficient remaining disk space (407634968576 B)
[2025-10-12 17:57:20] 2025-10-12 22:56:27,808 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 17:57:20] 2025-10-12 22:56:27,808 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 17:57:20] 2025-10-12 22:56:27,808 | INFO     | update_server=False
[2025-10-12 17:57:20] 2025-10-12 22:56:27,808 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 17:57:20] 2025-10-12 22:56:27,808 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:57:20] 2025-10-12 22:56:27,809 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-12 17:57:20] 2025-10-12 22:56:27,809 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 17:57:20] 2025-10-12 22:56:27,809 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 17:57:20] 2025-10-12 22:56:27,809 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 17:57:20] 2025-10-12 22:56:27,913 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 17:57:20] 2025-10-12 22:56:27,913 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 17:57:20] 2025-10-12 22:56:27,913 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:57:20] 2025-10-12 22:56:27,913 | INFO     | will abort loop
[2025-10-12 17:57:20] 2025-10-12 22:56:28,011 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 17:57:20] 2025-10-12 22:56:28,016 | INFO     | all payload control threads have been joined
[2025-10-12 17:57:20] 2025-10-12 22:56:28,218 | INFO     | all job control threads have been joined
[2025-10-12 17:57:20] 2025-10-12 22:56:28,577 | INFO     | all data control threads have been joined
[2025-10-12 17:57:20] 2025-10-12 22:56:28,814 | INFO     | [job] retrieve thread has finished
[2025-10-12 17:57:20] 2025-10-12 22:56:28,814 | INFO     | [job] queue monitor thread has finished
[2025-10-12 17:57:20] 2025-10-12 22:56:28,918 | INFO     | [job] job monitor thread has finished
[2025-10-12 17:57:20] 2025-10-12 22:56:28,935 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 17:57:20] 2025-10-12 22:56:29,022 | INFO     | [payload] control thread has finished
[2025-10-12 17:57:20] 2025-10-12 22:56:29,224 | INFO     | [job] control thread has finished
[2025-10-12 17:57:20] 2025-10-12 22:56:29,256 | INFO     | [data] copytool_in thread has finished
[2025-10-12 17:57:20] 2025-10-12 22:56:29,402 | INFO     | [job] validate thread has finished
[2025-10-12 17:57:20] 2025-10-12 22:56:29,582 | INFO     | [data] control thread has finished
[2025-10-12 17:57:20] 2025-10-12 22:56:29,693 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 17:57:20] 2025-10-12 22:56:29,703 | INFO     | [payload] failed_post thread has finished
[2025-10-12 17:57:20] 2025-10-12 22:56:29,742 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 17:57:20] 2025-10-12 22:56:29,887 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 17:57:20] 2025-10-12 22:56:30,016 | INFO     | [data] copytool_out thread has finished
[2025-10-12 17:57:20] 2025-10-12 22:56:30,218 | INFO     | [payload] validate_post thread has finished
[2025-10-12 17:57:20] 2025-10-12 22:56:30,728 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 17:57:20] 2025-10-12 22:56:34,734 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 17:57:20] 2025-10-12 22:57:13,715 | INFO     | [monitor] cgroup control has ended
[2025-10-12 17:57:20] 2025-10-12 22:57:14,729 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139670631950144)>', '<ExcThread(monitor, started 139669920544512)>']
[2025-10-12 17:57:20] 2025-10-12 22:57:15,011 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 17:57:20] 2025-10-12 22:57:15,011 | INFO     | [monitor] control thread has ended
[2025-10-12 17:57:20] 2025-10-12 22:57:19,742 | INFO     | all workflow threads have been joined
[2025-10-12 17:57:20] 2025-10-12 22:57:19,742 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 17:57:20] 2025-10-12 22:57:19,743 | INFO     | traces error code: 0
[2025-10-12 17:57:20] 2025-10-12 22:57:19,743 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 17:57:20] 2025-10-12 22:57:19,869 [wrapper] ==== pilot stdout END ====
[2025-10-12 17:57:20] 2025-10-12 22:57:19,872 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 17:57:20] 2025-10-12 22:57:19,877 [wrapper] pilotpid: 1987920
[2025-10-12 17:57:20] 2025-10-12 22:57:19,879 [wrapper] Pilot exit status: 0
[2025-10-12 17:57:20] 2025-10-12 22:57:19,891 [wrapper] pandaids: 6840181823
[2025-10-12 17:57:20] 2025-10-12 22:57:19,930 [wrapper] cleanup supervisor_pilot 2013240 1987921
[2025-10-12 17:57:20] 2025-10-12 22:57:19,935 [wrapper] Test setup, not cleaning
[2025-10-12 17:57:20] 2025-10-12 22:57:19,941 [wrapper] apfmon messages muted
[2025-10-12 17:57:20] 2025-10-12 22:57:19,944 [wrapper] ==== wrapper stdout END ====
[2025-10-12 17:57:20] 2025-10-12 22:57:19,947 [wrapper] ==== wrapper stderr END ====
[2025-10-12 17:57:20]  *** Error codes and diagnostics ***
[2025-10-12 17:57:20]     "exeErrorCode": 0,
[2025-10-12 17:57:20]     "exeErrorDiag": "",
[2025-10-12 17:57:20]     "pilotErrorCode": 0,
[2025-10-12 17:57:20]     "pilotErrorDiag": "",
[2025-10-12 17:57:20]  *** Listing of results directory ***
[2025-10-12 17:57:20] total 413620
[2025-10-12 17:57:20] -rw-r--r-- 1 boinc boinc    557409 Oct 12 08:55 pilot3.tar.gz
[2025-10-12 17:57:20] -rw-r--r-- 1 boinc boinc      5112 Oct 12 09:22 queuedata.json
[2025-10-12 17:57:20] -rwx------ 1 boinc boinc     36292 Oct 12 09:22 runpilot2-wrapper.sh
[2025-10-12 17:57:20] -rw-r--r-- 1 boinc boinc       100 Oct 12 15:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 17:57:20] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 15:33 run_atlas
[2025-10-12 17:57:20] -rw-r--r-- 1 boinc boinc       105 Oct 12 15:33 job.xml
[2025-10-12 17:57:20] -rw-r--r-- 2 boinc boinc 219525561 Oct 12 15:33 EVNT.46676267._004236.pool.root.1
[2025-10-12 17:57:20] -rw-r--r-- 1 boinc boinc      9535 Oct 12 15:33 init_data.xml
[2025-10-12 17:57:20] drwxrwx--x 2 boinc boinc      4096 Oct 12 15:33 shared
[2025-10-12 17:57:20] -rw-r--r-- 2 boinc boinc    569682 Oct 12 15:33 input.tar.gz
[2025-10-12 17:57:20] -rw-r--r-- 2 boinc boinc     15120 Oct 12 15:33 start_atlas.sh
[2025-10-12 17:57:20] -rw-r--r-- 1 boinc boinc         0 Oct 12 15:33 boinc_lockfile
[2025-10-12 17:57:20] -rw-r--r-- 1 boinc boinc      2550 Oct 12 15:33 pandaJob.out
[2025-10-12 17:57:20] -rw------- 1 boinc boinc    975536 Oct 12 15:33 agis_schedconf.cvmfs.json
[2025-10-12 17:57:20] -rw------- 1 boinc boinc   1560580 Oct 12 15:33 agis_ddmendpoints.agis.ALL.json
[2025-10-12 17:57:20] drwx------ 5 boinc boinc      4096 Oct 12 15:34 pilot3
[2025-10-12 17:57:20] -rw------- 1 boinc boinc 197050213 Oct 12 17:55 HITS.46676269._080698.pool.root.1
[2025-10-12 17:57:20] -rw------- 1 boinc boinc        95 Oct 12 17:56 pilot_heartbeat.json
[2025-10-12 17:57:20] -rw-r--r-- 1 boinc boinc       530 Oct 12 17:56 boinc_task_state.xml
[2025-10-12 17:57:20] -rw------- 1 boinc boinc      1015 Oct 12 17:56 memory_monitor_summary.json
[2025-10-12 17:57:20] -rw------- 1 boinc boinc    319126 Oct 12 17:56 log.46676269._080698.job.log.tgz.1
[2025-10-12 17:57:20] -rw------- 1 boinc boinc      7747 Oct 12 17:56 heartbeat.json
[2025-10-12 17:57:20] -rw-r--r-- 1 boinc boinc      8192 Oct 12 17:57 boinc_mmap_file
[2025-10-12 17:57:20] -rw-r--r-- 1 boinc boinc        27 Oct 12 17:57 wrapper_checkpoint.txt
[2025-10-12 17:57:20] -rw------- 1 boinc boinc      4736 Oct 12 17:57 pilotlog.txt
[2025-10-12 17:57:20] -rw------- 1 boinc boinc   1212764 Oct 12 17:57 log.46676269._080698.job.log.1
[2025-10-12 17:57:20] -rw------- 1 boinc boinc       357 Oct 12 17:57 output.list
[2025-10-12 17:57:20] -rw-r--r-- 1 boinc boinc       620 Oct 12 17:57 runtime_log
[2025-10-12 17:57:20] -rw------- 1 boinc boinc   1546240 Oct 12 17:57 result.tar.gz
[2025-10-12 17:57:20] -rw-r--r-- 1 boinc boinc      8622 Oct 12 17:57 runtime_log.err
[2025-10-12 17:57:20] -rw------- 1 boinc boinc       643 Oct 12 17:57 8nXKDmh8BS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm84TMDm9d58Wn.diag
[2025-10-12 17:57:20] -rw-r--r-- 1 boinc boinc     20720 Oct 12 17:57 stderr.txt
[2025-10-12 17:57:20] HITS file was successfully produced:
[2025-10-12 17:57:20] -rw------- 1 boinc boinc 197050213 Oct 12 17:55 shared/HITS.pool.root.1
[2025-10-12 17:57:20]  *** Contents of shared directory: ***
[2025-10-12 17:57:20] total 408912
[2025-10-12 17:57:20] -rw-r--r-- 2 boinc boinc 219525561 Oct 12 15:33 ATLAS.root_0
[2025-10-12 17:57:20] -rw-r--r-- 2 boinc boinc    569682 Oct 12 15:33 input.tar.gz
[2025-10-12 17:57:20] -rw-r--r-- 2 boinc boinc     15120 Oct 12 15:33 start_atlas.sh
[2025-10-12 17:57:20] -rw------- 1 boinc boinc 197050213 Oct 12 17:55 HITS.pool.root.1
[2025-10-12 17:57:20] -rw------- 1 boinc boinc   1546240 Oct 12 17:57 result.tar.gz
17:57:21 (1984106): run_atlas exited; CPU time 33091.178342
17:57:21 (1984106): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN