Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:40:42 (23184): wrapper (7.7.26015): starting
01:40:42 (23184): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 01:40:42] Arguments: --nthreads 8
[2025-10-13 01:40:42] Threads: 8
[2025-10-13 01:40:42] Checking for CVMFS
[2025-10-13 01:40:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 01:40:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 01:40:44] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 01:40:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 01:40:46] 2.11.2.0 21240 221077 139976 151641 2 60 14463651 25165825 4632 130560 0 112288838 99.880 68429207 3305 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-13 01:40:46] CVMFS is ok
[2025-10-13 01:40:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 01:40:46] Checking for apptainer binary...
[2025-10-13 01:40:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 01:40:46] Running /usr/bin/apptainer --version
[2025-10-13 01:40:46] apptainer version 1.3.2-1.el7
[2025-10-13 01:40:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 01:40:52] cg-vwn384.simple-grid.lan
[2025-10-13 01:40:52] apptainer works
[2025-10-13 01:40:52] Set ATHENA_PROC_NUMBER=8
[2025-10-13 01:40:52] Set ATHENA_CORE_NUMBER=8
[2025-10-13 01:40:52] Starting ATLAS job with PandaID=6840181702
[2025-10-13 01:40:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:52:06]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:52:06] 2025-10-13 03:51:47,464 | INFO     | sum of deviations: 69014037046.5
[2025-10-13 05:52:06] 2025-10-13 03:51:47,464 | INFO     | mean x: 1760320251.5
[2025-10-13 05:52:06] 2025-10-13 03:51:47,464 | INFO     | mean y: 2434129.2435897435
[2025-10-13 05:52:06] 2025-10-13 03:51:47,464 | INFO     | -- intersect: -30575705065.86272
[2025-10-13 05:52:06] 2025-10-13 03:51:47,464 | INFO     | intersect: -30575705065.86272
[2025-10-13 05:52:06] 2025-10-13 03:51:47,465 | INFO     | chi2: 5.941655800498377
[2025-10-13 05:52:06] 2025-10-13 03:51:47,465 | INFO     | sum of square deviations: 3723716330.0
[2025-10-13 05:52:06] 2025-10-13 03:51:47,467 | INFO     | sum of deviations: 82812606310.00003
[2025-10-13 05:52:06] 2025-10-13 03:51:47,467 | INFO     | mean x: 1760320099.0
[2025-10-13 05:52:06] 2025-10-13 03:51:47,467 | INFO     | mean y: 2442406.825327511
[2025-10-13 05:52:06] 2025-10-13 03:51:47,467 | INFO     | -- intersect: -39145731734.05164
[2025-10-13 05:52:06] 2025-10-13 03:51:47,468 | INFO     | intersect: -39145731734.05164
[2025-10-13 05:52:06] 2025-10-13 03:51:47,468 | INFO     | chi2: 5.215327100465588
[2025-10-13 05:52:06] 2025-10-13 03:51:47,468 | INFO     | current chi2=5.215327100465588 (change=12.224348303243438 %)
[2025-10-13 05:52:06] 2025-10-13 03:51:47,468 | INFO     | right removable region: 228
[2025-10-13 05:52:06] 2025-10-13 03:51:47,469 | INFO     | sum of square deviations: 3723716330.0
[2025-10-13 05:52:06] 2025-10-13 03:51:47,471 | INFO     | sum of deviations: -7910751876.999996
[2025-10-13 05:52:06] 2025-10-13 03:51:47,471 | INFO     | mean x: 1760320404.0
[2025-10-13 05:52:06] 2025-10-13 03:51:47,471 | INFO     | mean y: 2481136.676855895
[2025-10-13 05:52:06] 2025-10-13 03:51:47,471 | INFO     | -- intersect: 3742147831.4447656
[2025-10-13 05:52:06] 2025-10-13 03:51:47,471 | INFO     | intersect: 3742147831.4447656
[2025-10-13 05:52:06] 2025-10-13 03:51:47,472 | INFO     | chi2: 1.6347704092227433
[2025-10-13 05:52:06] 2025-10-13 03:51:47,472 | INFO     | current chi2=1.6347704092227433 (change=72.48628220628967 %)
[2025-10-13 05:52:06] 2025-10-13 03:51:47,472 | INFO     | sum of square deviations: 3485088600.0
[2025-10-13 05:52:06] 2025-10-13 03:51:47,474 | INFO     | sum of deviations: -33650714172.0
[2025-10-13 05:52:06] 2025-10-13 03:51:47,475 | INFO     | mean x: 1760320556.5
[2025-10-13 05:52:06] 2025-10-13 03:51:47,475 | INFO     | mean y: 2497437.2946428573
[2025-10-13 05:52:06] 2025-10-13 03:51:47,475 | INFO     | -- intersect: 16999495418.315119
[2025-10-13 05:52:06] 2025-10-13 03:51:47,475 | INFO     | intersect: 16999495418.315119
[2025-10-13 05:52:06] 2025-10-13 03:51:47,475 | INFO     | chi2: 0.9092385601455956
[2025-10-13 05:52:06] 2025-10-13 03:51:47,475 | INFO     | current chi2=0.9092385601455956 (change=44.38126876923984 %)
[2025-10-13 05:52:06] 2025-10-13 03:51:47,476 | INFO     | sum of square deviations: 3256879670.0
[2025-10-13 05:52:06] 2025-10-13 03:51:47,478 | INFO     | sum of deviations: -30811884216.0
[2025-10-13 05:52:06] 2025-10-13 03:51:47,478 | INFO     | mean x: 1760320709.0
[2025-10-13 05:52:06] 2025-10-13 03:51:47,478 | INFO     | mean y: 2495505.342465753
[2025-10-13 05:52:06] 2025-10-13 03:51:47,478 | INFO     | -- intersect: 16656103671.570797
[2025-10-13 05:52:06] 2025-10-13 03:51:47,478 | INFO     | intersect: 16656103671.570797
[2025-10-13 05:52:06] 2025-10-13 03:51:47,479 | INFO     | chi2: 0.8947152674765627
[2025-10-13 05:52:06] 2025-10-13 03:51:47,479 | INFO     | current chi2=0.8947152674765627 (change=1.5973027658117853 %)
[2025-10-13 05:52:06] 2025-10-13 03:51:47,479 | INFO     | left removable region: 30
[2025-10-13 05:52:06] 2025-10-13 03:51:47,479 | INFO     | sum of square deviations: 2406926989.5
[2025-10-13 05:52:06] 2025-10-13 03:51:47,481 | INFO     | sum of deviations: 2426287810.0
[2025-10-13 05:52:06] 2025-10-13 03:51:47,481 | INFO     | mean x: 1760320983.5
[2025-10-13 05:52:06] 2025-10-13 03:51:47,481 | INFO     | mean y: 2491888.5757575757
[2025-10-13 05:52:06] 2025-10-13 03:51:47,481 | INFO     | -- intersect: -1771988751.0885563
[2025-10-13 05:52:06] 2025-10-13 03:51:47,481 | INFO     | intersect: -1771988751.0885563
[2025-10-13 05:52:06] 2025-10-13 03:51:47,482 | INFO     | chi2: 0.000208897882997025
[2025-10-13 05:52:06] 2025-10-13 03:51:47,482 | INFO     | -- intersect: -1771988751.0885563
[2025-10-13 05:52:06] 2025-10-13 03:51:47,482 | INFO     | current memory leak: 1.01 B/s (using 198 data points, chi2=0.00)
[2025-10-13 05:52:06] 2025-10-13 03:51:47,483 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-13 05:52:06] 2025-10-13 03:51:47,483 | INFO     | ..............................
[2025-10-13 05:52:06] 2025-10-13 03:51:47,483 | INFO     | . Timing measurements:
[2025-10-13 05:52:06] 2025-10-13 03:51:47,483 | INFO     | . get job = 0 s
[2025-10-13 05:52:06] 2025-10-13 03:51:47,483 | INFO     | . initial setup = 8 s
[2025-10-13 05:52:06] 2025-10-13 03:51:47,483 | INFO     | . payload setup = 133 s
[2025-10-13 05:52:06] 2025-10-13 03:51:47,484 | INFO     | . stage-in = 0 s
[2025-10-13 05:52:06] 2025-10-13 03:51:47,484 | INFO     | . payload execution = 14416 s
[2025-10-13 05:52:06] 2025-10-13 03:51:47,484 | INFO     | . stage-out = 2 s
[2025-10-13 05:52:06] 2025-10-13 03:51:47,484 | INFO     | . log creation = 1 s
[2025-10-13 05:52:06] 2025-10-13 03:51:47,484 | INFO     | ..............................
[2025-10-13 05:52:06] 2025-10-13 03:51:47,844 | INFO     | time since job start (14836s) is within the limit (172800.0s)
[2025-10-13 05:52:06] 2025-10-13 03:51:47,890 | INFO     | 
[2025-10-13 05:52:06] 2025-10-13 03:51:47,890 | INFO     | job summary report
[2025-10-13 05:52:06] 2025-10-13 03:51:47,890 | INFO     | --------------------------------------------------
[2025-10-13 05:52:06] 2025-10-13 03:51:47,890 | INFO     | PanDA job id: 6840181702
[2025-10-13 05:52:06] 2025-10-13 03:51:47,891 | INFO     | task id: 46676269
[2025-10-13 05:52:06] 2025-10-13 03:51:47,891 | INFO     | errors: (none)
[2025-10-13 05:52:06] 2025-10-13 03:51:47,891 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:52:06] 2025-10-13 03:51:47,891 | INFO     | pilot state: finished 
[2025-10-13 05:52:06] 2025-10-13 03:51:47,891 | INFO     | transexitcode: 0
[2025-10-13 05:52:06] 2025-10-13 03:51:47,891 | INFO     | exeerrorcode: 0
[2025-10-13 05:52:06] 2025-10-13 03:51:47,891 | INFO     | exeerrordiag: 
[2025-10-13 05:52:06] 2025-10-13 03:51:47,891 | INFO     | exitcode: 0
[2025-10-13 05:52:06] 2025-10-13 03:51:47,891 | INFO     | exitmsg: OK
[2025-10-13 05:52:06] 2025-10-13 03:51:47,891 | INFO     | cpuconsumptiontime: 52982 s
[2025-10-13 05:52:06] 2025-10-13 03:51:47,891 | INFO     | nevents: 400
[2025-10-13 05:52:06] 2025-10-13 03:51:47,891 | INFO     | neventsw: 0
[2025-10-13 05:52:06] 2025-10-13 03:51:47,892 | INFO     | pid: 1134
[2025-10-13 05:52:06] 2025-10-13 03:51:47,892 | INFO     | pgrp: 1134
[2025-10-13 05:52:06] 2025-10-13 03:51:47,892 | INFO     | corecount: 8
[2025-10-13 05:52:06] 2025-10-13 03:51:47,892 | INFO     | event service: False
[2025-10-13 05:52:06] 2025-10-13 03:51:47,892 | INFO     | sizes: {0: 2348029, 1: 2348886, 2: 2348914, 12: 2348914, 23: 2348942, 34: 2348970, 45: 2349126, 55: 2349154, 66: 2349182, 77: 2349210, 88: 2349266, 93: 2349836, 98
[2025-10-13 05:52:06] 2025-10-13 03:51:47,892 | INFO     | --------------------------------------------------
[2025-10-13 05:52:06] 2025-10-13 03:51:47,892 | INFO     | 
[2025-10-13 05:52:06] 2025-10-13 03:51:47,892 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-10-13 05:52:06] 2025-10-13 03:51:47,952 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:52:06] 2025-10-13 03:51:47,952 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:52:06] 2025-10-13 03:51:47,953 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:52:06] 2025-10-13 03:51:47,953 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:52:06] 2025-10-13 03:51:47,953 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:52:06] 2025-10-13 03:51:47,953 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:52:06] 2025-10-13 03:51:47,953 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:52:06] 2025-10-13 03:51:47,953 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:52:06] 2025-10-13 03:51:47,953 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:52:06] 2025-10-13 03:51:47,953 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:52:06] 2025-10-13 03:51:47,954 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:52:06] 2025-10-13 03:51:47,954 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:52:06] 2025-10-13 03:51:47,954 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:52:06] 2025-10-13 03:51:47,954 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:52:06] 2025-10-13 03:51:47,954 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:52:06] 2025-10-13 03:51:47,954 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:52:06] 2025-10-13 03:51:47,954 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:52:06] 2025-10-13 03:51:47,954 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:52:06] 2025-10-13 03:51:47,954 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:52:06] 2025-10-13 03:51:47,955 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:52:06] 2025-10-13 03:51:47,955 | INFO     | job 6840181702 has completed (purged errors)
[2025-10-13 05:52:06] 2025-10-13 03:51:47,955 | INFO     | overall cleanup function is called
[2025-10-13 05:52:06] 2025-10-13 03:51:48,971 | INFO     | --- collectZombieJob: --- 10, [1134]
[2025-10-13 05:52:06] 2025-10-13 03:51:48,971 | INFO     | zombie collector waiting for pid 1134
[2025-10-13 05:52:06] 2025-10-13 03:51:48,971 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:52:06] 2025-10-13 03:51:48,972 | INFO     | collected zombie processes
[2025-10-13 05:52:06] 2025-10-13 03:51:48,972 | INFO     | will attempt to kill all subprocesses of pid=1134
[2025-10-13 05:52:06] 2025-10-13 03:51:49,039 | INFO     | PID=26985 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 05:52:06] 2025-10-13 03:51:49,039 | INFO     | .. there are 9 such processes running
[2025-10-13 05:52:06] 2025-10-13 03:51:49,129 | INFO     | process IDs to be killed: [1134] (in reverse order)
[2025-10-13 05:52:06] 2025-10-13 03:51:49,197 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:52:06] 2025-10-13 03:51:49,198 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:52:06] 2025-10-13 03:51:49,202 | INFO     | did not find any defunct processes belonging to 1134
[2025-10-13 05:52:06] 2025-10-13 03:51:49,205 | INFO     | did not find any defunct processes belonging to 1134
[2025-10-13 05:52:06] 2025-10-13 03:51:49,206 | INFO     | ready for new job
[2025-10-13 05:52:06] 2025-10-13 03:51:49,206 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:52:06] 2025-10-13 03:51:49,208 | INFO     | ***************************************
[2025-10-13 05:52:06] 2025-10-13 03:51:49,208 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:52:06] 2025-10-13 03:51:49,208 | INFO     | ***************************************
[2025-10-13 05:52:06] 2025-10-13 03:51:49,209 | INFO     | 
[2025-10-13 05:52:06] 2025-10-13 03:51:49,209 | INFO     | pilot is running in a VM
[2025-10-13 05:52:06] 2025-10-13 03:51:49,209 | INFO     | architecture information:
[2025-10-13 05:52:06] 2025-10-13 03:51:49,210 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:52:06] 2025-10-13 03:51:49,233 | INFO     | cat /etc/os-release:
[2025-10-13 05:52:06] NAME="CentOS Linux"
[2025-10-13 05:52:06] VERSION="7 (Core)"
[2025-10-13 05:52:06] ID="centos"
[2025-10-13 05:52:06] ID_LIKE="rhel fedora"
[2025-10-13 05:52:06] VERSION_ID="7"
[2025-10-13 05:52:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:52:06] ANSI_COLOR="0;31"
[2025-10-13 05:52:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:52:06] HOME_URL="https://www.centos.org/"
[2025-10-13 05:52:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:52:06] 
[2025-10-13 05:52:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:52:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:52:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:52:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:52:06] 
[2025-10-13 05:52:06] 2025-10-13 03:51:49,233 | INFO     | ***************************************
[2025-10-13 05:52:06] 2025-10-13 03:51:49,736 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-10-13 05:52:06] 2025-10-13 03:51:49,956 | INFO     | sufficient remaining disk space (495021195264 B)
[2025-10-13 05:52:06] 2025-10-13 03:51:49,956 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:52:06] 2025-10-13 03:51:49,956 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:52:06] 2025-10-13 03:51:49,956 | INFO     | update_server=False
[2025-10-13 05:52:06] 2025-10-13 03:51:49,956 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:52:06] 2025-10-13 03:51:49,957 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 05:52:06] 2025-10-13 03:51:49,957 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:52:06] 2025-10-13 03:51:49,957 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:52:06] 2025-10-13 03:51:49,957 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:52:06] 2025-10-13 03:51:49,957 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:52:06] 2025-10-13 03:51:49,963 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:52:06] 2025-10-13 03:51:50,116 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 05:52:06] 2025-10-13 03:51:50,116 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 05:52:06] 2025-10-13 03:51:50,116 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:52:06] 2025-10-13 03:51:50,117 | INFO     | will abort loop
[2025-10-13 05:52:06] 2025-10-13 03:51:50,488 | INFO     | all data control threads have been joined
[2025-10-13 05:52:06] 2025-10-13 03:51:50,751 | INFO     | all job control threads have been joined
[2025-10-13 05:52:06] 2025-10-13 03:51:50,962 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:52:06] 2025-10-13 03:51:51,054 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:52:06] 2025-10-13 03:51:51,067 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:52:06] 2025-10-13 03:51:51,122 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:52:06] 2025-10-13 03:51:51,134 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:52:06] 2025-10-13 03:51:51,437 | INFO     | all payload control threads have been joined
[2025-10-13 05:52:06] 2025-10-13 03:51:51,494 | INFO     | [data] control thread has finished
[2025-10-13 05:52:06] 2025-10-13 03:51:51,626 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:52:06] 2025-10-13 03:51:51,757 | INFO     | [job] control thread has finished
[2025-10-13 05:52:06] 2025-10-13 03:51:51,819 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:52:06] 2025-10-13 03:51:51,919 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:52:06] 2025-10-13 03:51:51,971 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:52:06] 2025-10-13 03:51:52,020 | INFO     | [job] validate thread has finished
[2025-10-13 05:52:06] 2025-10-13 03:51:52,240 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:52:06] 2025-10-13 03:51:52,443 | INFO     | [payload] control thread has finished
[2025-10-13 05:52:06] 2025-10-13 03:51:52,654 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:52:06] 2025-10-13 03:51:53,660 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:52:06] 2025-10-13 03:51:53,966 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:52:06] 2025-10-13 03:51:56,406 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:52:06] 2025-10-13 03:51:57,131 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140369267255104)>', '<ExcThread(monitor, started 140368809006848)>']
[2025-10-13 05:52:06] 2025-10-13 03:51:58,003 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:52:06] 2025-10-13 03:51:58,003 | INFO     | [monitor] control thread has ended
[2025-10-13 05:52:06] 2025-10-13 03:52:02,157 | INFO     | all workflow threads have been joined
[2025-10-13 05:52:06] 2025-10-13 03:52:02,157 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:52:06] 2025-10-13 03:52:02,158 | INFO     | traces error code: 0
[2025-10-13 05:52:06] 2025-10-13 03:52:02,158 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:52:06] 2025-10-13 03:52:02,377 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:52:06] 2025-10-13 03:52:02,383 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:52:06] 2025-10-13 03:52:02,388 [wrapper] pilotpid: 26985
[2025-10-13 05:52:06] 2025-10-13 03:52:02,398 [wrapper] Pilot exit status: 0
[2025-10-13 05:52:06] 2025-10-13 03:52:02,711 [wrapper] pandaids: 6840181702
[2025-10-13 05:52:06] 2025-10-13 03:52:03,604 [wrapper] cleanup supervisor_pilot 25646 26986
[2025-10-13 05:52:06] 2025-10-13 03:52:03,645 [wrapper] Test setup, not cleaning
[2025-10-13 05:52:06] 2025-10-13 03:52:03,754 [wrapper] apfmon messages muted
[2025-10-13 05:52:06] 2025-10-13 03:52:03,846 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:52:06] 2025-10-13 03:52:03,943 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:52:06]  *** Error codes and diagnostics ***
[2025-10-13 05:52:06]     "exeErrorCode": 0,
[2025-10-13 05:52:06]     "exeErrorDiag": "",
[2025-10-13 05:52:06]     "pilotErrorCode": 0,
[2025-10-13 05:52:06]     "pilotErrorDiag": "",
[2025-10-13 05:52:06]  *** Listing of results directory ***
[2025-10-13 05:52:06] total 404848
[2025-10-13 05:52:06] -rw-r--r--. 1 boinc boinc    557409 Oct 12 15:55 pilot3.tar.gz
[2025-10-13 05:52:06] -rw-r--r--. 1 boinc boinc      5112 Oct 12 16:22 queuedata.json
[2025-10-13 05:52:06] -rwx------. 1 boinc boinc     36292 Oct 12 16:22 runpilot2-wrapper.sh
[2025-10-13 05:52:06] -rw-r--r--. 1 boinc boinc       100 Oct 13 01:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:52:06] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 01:40 run_atlas
[2025-10-13 05:52:06] -rw-r--r--. 1 boinc boinc       105 Oct 13 01:40 job.xml
[2025-10-13 05:52:06] -rw-r--r--. 2 boinc boinc 218946687 Oct 13 01:40 EVNT.46676267._004228.pool.root.1
[2025-10-13 05:52:06] drwxrwx--x. 2 boinc boinc        68 Oct 13 01:40 shared
[2025-10-13 05:52:06] -rw-r--r--. 2 boinc boinc    569680 Oct 13 01:40 input.tar.gz
[2025-10-13 05:52:06] -rw-r--r--. 1 boinc boinc      6387 Oct 13 01:40 init_data.xml
[2025-10-13 05:52:06] -rw-r--r--. 2 boinc boinc     15120 Oct 13 01:40 start_atlas.sh
[2025-10-13 05:52:06] -rw-r--r--. 1 boinc boinc         0 Oct 13 01:40 boinc_lockfile
[2025-10-13 05:52:06] -rw-r--r--. 1 boinc boinc      2550 Oct 13 01:40 pandaJob.out
[2025-10-13 05:52:06] -rw-------. 1 boinc boinc    975603 Oct 13 01:44 agis_schedconf.cvmfs.json
[2025-10-13 05:52:06] drwx------. 5 boinc boinc      4096 Oct 13 01:44 pilot3
[2025-10-13 05:52:06] -rw-------. 1 boinc boinc 186827808 Oct 13 05:49 HITS.46676269._080577.pool.root.1
[2025-10-13 05:52:06] -rw-r--r--. 1 boinc boinc       531 Oct 13 05:49 boinc_task_state.xml
[2025-10-13 05:52:06] -rw-------. 1 boinc boinc      1019 Oct 13 05:50 memory_monitor_summary.json
[2025-10-13 05:52:06] -rw-------. 1 boinc boinc   1560580 Oct 13 05:50 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:52:06] -rw-------. 1 boinc boinc    466007 Oct 13 05:50 log.46676269._080577.job.log.tgz.1
[2025-10-13 05:52:06] -rw-------. 1 boinc boinc        95 Oct 13 05:51 pilot_heartbeat.json
[2025-10-13 05:52:06] -rw-r--r--. 1 boinc boinc      8192 Oct 13 05:51 boinc_mmap_file
[2025-10-13 05:52:06] -rw-r--r--. 1 boinc boinc        28 Oct 13 05:51 wrapper_checkpoint.txt
[2025-10-13 05:52:06] -rw-------. 1 boinc boinc      7794 Oct 13 05:51 heartbeat.json
[2025-10-13 05:52:06] -rw-------. 1 boinc boinc      4802 Oct 13 05:52 pilotlog.txt
[2025-10-13 05:52:06] -rw-------. 1 boinc boinc   1983786 Oct 13 05:52 log.46676269._080577.job.log.1
[2025-10-13 05:52:06] -rw-------. 1 boinc boinc       357 Oct 13 05:52 output.list
[2025-10-13 05:52:06] -rw-r--r--. 1 boinc boinc       620 Oct 13 05:52 runtime_log
[2025-10-13 05:52:06] -rw-------. 1 boinc boinc   2467840 Oct 13 05:52 result.tar.gz
[2025-10-13 05:52:06] -rw-r--r--. 1 boinc boinc      8717 Oct 13 05:52 runtime_log.err
[2025-10-13 05:52:06] -rw-------. 1 boinc boinc       656 Oct 13 05:52 gVLKDmf8BS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmk4TMDmY2PKPn.diag
[2025-10-13 05:52:06] -rw-r--r--. 1 boinc boinc     20714 Oct 13 05:52 stderr.txt
[2025-10-13 05:52:06] HITS file was successfully produced:
[2025-10-13 05:52:06] -rw-------. 1 boinc boinc 186827808 Oct 13 05:49 shared/HITS.pool.root.1
[2025-10-13 05:52:06]  *** Contents of shared directory: ***
[2025-10-13 05:52:06] total 399256
[2025-10-13 05:52:06] -rw-r--r--. 2 boinc boinc 218946687 Oct 13 01:40 ATLAS.root_0
[2025-10-13 05:52:06] -rw-r--r--. 2 boinc boinc    569680 Oct 13 01:40 input.tar.gz
[2025-10-13 05:52:06] -rw-r--r--. 2 boinc boinc     15120 Oct 13 01:40 start_atlas.sh
[2025-10-13 05:52:06] -rw-------. 1 boinc boinc 186827808 Oct 13 05:49 HITS.pool.root.1
[2025-10-13 05:52:06] -rw-------. 1 boinc boinc   2467840 Oct 13 05:52 result.tar.gz
05:52:07 (23184): run_atlas exited; CPU time 53185.271892
05:52:07 (23184): called boinc_finish(0)

</stderr_txt>
]]>

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