Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:36:32 (10100): wrapper (7.7.26015): starting
11:36:32 (10100): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 11:36:32] Arguments: --nthreads 8
[2025-10-12 11:36:32] Threads: 8
[2025-10-12 11:36:32] Checking for CVMFS
[2025-10-12 11:36:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 11:36:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 11:36:33] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 11:36:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 11:36:33] 2.11.2.0 2892 206037 83104 151625 3 56 12632955 20275201 1 130560 1 74263359 99.977 10713358 9956 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 11:36:33] CVMFS is ok
[2025-10-12 11:36:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 11:36:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 11:36:33] Further information can be found at the LHC@home message board.
[2025-10-12 11:36:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 11:36:33] Checking for apptainer binary...
[2025-10-12 11:36:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 11:36:33] Running /usr/bin/apptainer --version
[2025-10-12 11:36:33] apptainer version 1.3.2-1.el7
[2025-10-12 11:36:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 11:36:35] c-204-27.aglt2.org
[2025-10-12 11:36:35] apptainer works
[2025-10-12 11:36:35] Set ATHENA_PROC_NUMBER=8
[2025-10-12 11:36:35] Set ATHENA_CORE_NUMBER=8
[2025-10-12 11:36:35] Starting ATLAS job with PandaID=6840181684
[2025-10-12 11:36:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 13:45:11]  *** The last 200 lines of the pilot log: ***
[2025-10-12 13:45:11] 2025-10-12 17:44:05,697 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 13:45:11] 2025-10-12 17:44:05,697 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 13:45:11] 2025-10-12 17:44:05,697 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 13:45:11] 2025-10-12 17:44:05,698 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 13:45:11] 2025-10-12 17:44:05,700 | INFO     | fitting pss+swap vs Time
[2025-10-12 13:45:11] 2025-10-12 17:44:05,701 | INFO     | sum of square deviations: 605592750.0
[2025-10-12 13:45:11] 2025-10-12 17:44:05,701 | INFO     | sum of deviations: -15120329738.000004
[2025-10-12 13:45:11] 2025-10-12 17:44:05,702 | INFO     | mean x: 1760287225.0
[2025-10-12 13:45:11] 2025-10-12 17:44:05,702 | INFO     | mean y: 2556850.248
[2025-10-12 13:45:11] 2025-10-12 17:44:05,702 | INFO     | -- intersect: 43953088417.1946
[2025-10-12 13:45:11] 2025-10-12 17:44:05,702 | INFO     | intersect: 43953088417.1946
[2025-10-12 13:45:11] 2025-10-12 17:44:05,702 | INFO     | chi2: 2.368027902816856
[2025-10-12 13:45:11] 2025-10-12 17:44:05,703 | INFO     | sum of square deviations: 535786790.0
[2025-10-12 13:45:11] 2025-10-12 17:44:05,703 | INFO     | sum of deviations: -5575368493.499999
[2025-10-12 13:45:11] 2025-10-12 17:44:05,703 | INFO     | mean x: 1760287072.5
[2025-10-12 13:45:11] 2025-10-12 17:44:05,704 | INFO     | mean y: 2577118.1416666666
[2025-10-12 13:45:11] 2025-10-12 17:44:05,704 | INFO     | -- intersect: 18320029632.287914
[2025-10-12 13:45:11] 2025-10-12 17:44:05,704 | INFO     | intersect: 18320029632.287914
[2025-10-12 13:45:11] 2025-10-12 17:44:05,704 | INFO     | chi2: 1.6008563638218725
[2025-10-12 13:45:11] 2025-10-12 17:44:05,704 | INFO     | current chi2=1.6008563638218725 (change=32.39706500427655 %)
[2025-10-12 13:45:11] 2025-10-12 17:44:05,705 | INFO     | sum of square deviations: 471562330.0
[2025-10-12 13:45:11] 2025-10-12 17:44:05,705 | INFO     | sum of deviations: -4472779188.999999
[2025-10-12 13:45:11] 2025-10-12 17:44:05,705 | INFO     | mean x: 1760286920.0
[2025-10-12 13:45:11] 2025-10-12 17:44:05,706 | INFO     | mean y: 2579737.7652173913
[2025-10-12 13:45:11] 2025-10-12 17:44:05,706 | INFO     | -- intersect: 16698940327.986462
[2025-10-12 13:45:11] 2025-10-12 17:44:05,706 | INFO     | intersect: 16698940327.986462
[2025-10-12 13:45:11] 2025-10-12 17:44:05,706 | INFO     | chi2: 1.6026121721539373
[2025-10-12 13:45:11] 2025-10-12 17:44:05,706 | INFO     | current chi2=1.6026121721539373 (change=-0.10967931737941725 %)
[2025-10-12 13:45:11] 2025-10-12 17:44:05,706 | INFO     | right removable region: 114
[2025-10-12 13:45:11] 2025-10-12 17:44:05,707 | INFO     | sum of square deviations: 535786790.0
[2025-10-12 13:45:11] 2025-10-12 17:44:05,707 | INFO     | sum of deviations: -33574549205.999992
[2025-10-12 13:45:11] 2025-10-12 17:44:05,707 | INFO     | mean x: 1760287377.5
[2025-10-12 13:45:11] 2025-10-12 17:44:05,708 | INFO     | mean y: 2596424.8333333335
[2025-10-12 13:45:11] 2025-10-12 17:44:05,708 | INFO     | -- intersect: 110309263695.5483
[2025-10-12 13:45:11] 2025-10-12 17:44:05,708 | INFO     | intersect: 110309263695.5483
[2025-10-12 13:45:11] 2025-10-12 17:44:05,708 | INFO     | chi2: 0.9413156290327619
[2025-10-12 13:45:11] 2025-10-12 17:44:05,708 | INFO     | current chi2=0.9413156290327619 (change=60.24896379333063 %)
[2025-10-12 13:45:11] 2025-10-12 17:44:05,709 | INFO     | sum of square deviations: 471562330.0
[2025-10-12 13:45:11] 2025-10-12 17:44:05,709 | INFO     | sum of deviations: -33535906315.99999
[2025-10-12 13:45:11] 2025-10-12 17:44:05,709 | INFO     | mean x: 1760287530.0
[2025-10-12 13:45:11] 2025-10-12 17:44:05,710 | INFO     | mean y: 2596201.2347826087
[2025-10-12 13:45:11] 2025-10-12 17:44:05,710 | INFO     | -- intersect: 125188248107.10907
[2025-10-12 13:45:11] 2025-10-12 17:44:05,710 | INFO     | intersect: 125188248107.10907
[2025-10-12 13:45:11] 2025-10-12 17:44:05,710 | INFO     | chi2: 0.9049382728023027
[2025-10-12 13:45:11] 2025-10-12 17:44:05,710 | INFO     | current chi2=0.9049382728023027 (change=3.864522707206973 %)
[2025-10-12 13:45:11] 2025-10-12 17:44:05,710 | INFO     | left removable region: 20
[2025-10-12 13:45:11] 2025-10-12 17:44:05,711 | INFO     | sum of square deviations: 257521107.5
[2025-10-12 13:45:11] 2025-10-12 17:44:05,711 | INFO     | sum of deviations: -17585459847.0
[2025-10-12 13:45:11] 2025-10-12 17:44:05,711 | INFO     | mean x: 1760287499.5
[2025-10-12 13:45:11] 2025-10-12 17:44:05,711 | INFO     | mean y: 2611309.9787234045
[2025-10-12 13:45:11] 2025-10-12 17:44:05,712 | INFO     | -- intersect: 120208156564.68483
[2025-10-12 13:45:11] 2025-10-12 17:44:05,712 | INFO     | intersect: 120208156564.68483
[2025-10-12 13:45:11] 2025-10-12 17:44:05,712 | INFO     | chi2: 0.08571511655991666
[2025-10-12 13:45:11] 2025-10-12 17:44:05,712 | INFO     | -- intersect: 120208156564.68483
[2025-10-12 13:45:11] 2025-10-12 17:44:05,712 | INFO     | current memory leak: -68.29 B/s (using 94 data points, chi2=0.09)
[2025-10-12 13:45:11] 2025-10-12 17:44:05,713 | INFO     | could have reported an average CPU frequency of 2008 MHz (8 samples)
[2025-10-12 13:45:11] 2025-10-12 17:44:05,713 | INFO     | ..............................
[2025-10-12 13:45:11] 2025-10-12 17:44:05,713 | INFO     | . Timing measurements:
[2025-10-12 13:45:11] 2025-10-12 17:44:05,713 | INFO     | . get job = 0 s
[2025-10-12 13:45:11] 2025-10-12 17:44:05,713 | INFO     | . initial setup = 2 s
[2025-10-12 13:45:11] 2025-10-12 17:44:05,713 | INFO     | . payload setup = 8 s
[2025-10-12 13:45:11] 2025-10-12 17:44:05,714 | INFO     | . stage-in = 0 s
[2025-10-12 13:45:11] 2025-10-12 17:44:05,714 | INFO     | . payload execution = 7592 s
[2025-10-12 13:45:11] 2025-10-12 17:44:05,714 | INFO     | . stage-out = 0 s
[2025-10-12 13:45:11] 2025-10-12 17:44:05,714 | INFO     | . log creation = 0 s
[2025-10-12 13:45:11] 2025-10-12 17:44:05,714 | INFO     | ..............................
[2025-10-12 13:45:11] 2025-10-12 17:44:05,813 | INFO     | 
[2025-10-12 13:45:11] 2025-10-12 17:44:05,814 | INFO     | job summary report
[2025-10-12 13:45:11] 2025-10-12 17:44:05,814 | INFO     | --------------------------------------------------
[2025-10-12 13:45:11] 2025-10-12 17:44:05,814 | INFO     | PanDA job id: 6840181684
[2025-10-12 13:45:11] 2025-10-12 17:44:05,814 | INFO     | task id: 46676269
[2025-10-12 13:45:11] 2025-10-12 17:44:05,815 | INFO     | errors: (none)
[2025-10-12 13:45:11] 2025-10-12 17:44:05,815 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 13:45:11] 2025-10-12 17:44:05,815 | INFO     | pilot state: finished 
[2025-10-12 13:45:11] 2025-10-12 17:44:05,815 | INFO     | transexitcode: 0
[2025-10-12 13:45:11] 2025-10-12 17:44:05,815 | INFO     | exeerrorcode: 0
[2025-10-12 13:45:11] 2025-10-12 17:44:05,815 | INFO     | exeerrordiag: 
[2025-10-12 13:45:11] 2025-10-12 17:44:05,815 | INFO     | exitcode: 0
[2025-10-12 13:45:11] 2025-10-12 17:44:05,816 | INFO     | exitmsg: OK
[2025-10-12 13:45:11] 2025-10-12 17:44:05,816 | INFO     | cpuconsumptiontime: 56460 s
[2025-10-12 13:45:11] 2025-10-12 17:44:05,816 | INFO     | nevents: 400
[2025-10-12 13:45:11] 2025-10-12 17:44:05,816 | INFO     | neventsw: 0
[2025-10-12 13:45:11] 2025-10-12 17:44:05,816 | INFO     | pid: 20233
[2025-10-12 13:45:11] 2025-10-12 17:44:05,816 | INFO     | pgrp: 20233
[2025-10-12 13:45:11] 2025-10-12 17:44:05,816 | INFO     | corecount: 8
[2025-10-12 13:45:11] 2025-10-12 17:44:05,816 | INFO     | event service: False
[2025-10-12 13:45:11] 2025-10-12 17:44:05,817 | INFO     | sizes: {0: 2348029, 1: 2348885, 7: 2349147, 12: 2349175, 7605: 2376721, 7606: 2385719, 7608: 2385903, 7617: 2386097}
[2025-10-12 13:45:11] 2025-10-12 17:44:05,817 | INFO     | --------------------------------------------------
[2025-10-12 13:45:11] 2025-10-12 17:44:05,817 | INFO     | 
[2025-10-12 13:45:11] 2025-10-12 17:44:05,817 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 13:45:11] 2025-10-12 17:44:05,843 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 13:45:11] 2025-10-12 17:44:05,843 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 13:45:11] 2025-10-12 17:44:05,843 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 13:45:11] 2025-10-12 17:44:05,844 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 13:45:11] 2025-10-12 17:44:05,844 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 13:45:11] 2025-10-12 17:44:05,844 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 13:45:11] 2025-10-12 17:44:05,844 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 13:45:11] 2025-10-12 17:44:05,844 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 13:45:11] 2025-10-12 17:44:05,844 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 13:45:11] 2025-10-12 17:44:05,845 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 13:45:11] 2025-10-12 17:44:05,845 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 13:45:11] 2025-10-12 17:44:05,845 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 13:45:11] 2025-10-12 17:44:05,845 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 13:45:11] 2025-10-12 17:44:05,845 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 13:45:11] 2025-10-12 17:44:05,845 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 13:45:11] 2025-10-12 17:44:05,846 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 13:45:11] 2025-10-12 17:44:05,846 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 13:45:11] 2025-10-12 17:44:05,846 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 13:45:11] 2025-10-12 17:44:05,846 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 13:45:11] 2025-10-12 17:44:05,846 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 13:45:11] 2025-10-12 17:44:05,847 | INFO     | job 6840181684 has completed (purged errors)
[2025-10-12 13:45:11] 2025-10-12 17:44:05,847 | INFO     | overall cleanup function is called
[2025-10-12 13:45:11] 2025-10-12 17:44:06,855 | INFO     | --- collectZombieJob: --- 10, [20233]
[2025-10-12 13:45:11] 2025-10-12 17:44:06,856 | INFO     | zombie collector waiting for pid 20233
[2025-10-12 13:45:11] 2025-10-12 17:44:06,856 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 13:45:11] 2025-10-12 17:44:06,856 | INFO     | collected zombie processes
[2025-10-12 13:45:11] 2025-10-12 17:44:06,856 | INFO     | will attempt to kill all subprocesses of pid=20233
[2025-10-12 13:45:11] 2025-10-12 17:44:06,948 | INFO     | process IDs to be killed: [20233] (in reverse order)
[2025-10-12 13:45:11] 2025-10-12 17:44:07,003 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 13:45:11] 2025-10-12 17:44:07,003 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 13:45:11] 2025-10-12 17:44:07,007 | INFO     | did not find any defunct processes belonging to 20233
[2025-10-12 13:45:11] 2025-10-12 17:44:07,010 | INFO     | did not find any defunct processes belonging to 20233
[2025-10-12 13:45:11] 2025-10-12 17:44:07,010 | INFO     | ready for new job
[2025-10-12 13:45:11] 2025-10-12 17:44:07,010 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 13:45:11] 2025-10-12 17:44:07,012 | INFO     | ***************************************
[2025-10-12 13:45:11] 2025-10-12 17:44:07,012 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 13:45:11] 2025-10-12 17:44:07,012 | INFO     | ***************************************
[2025-10-12 13:45:11] 2025-10-12 17:44:07,012 | INFO     | 
[2025-10-12 13:45:11] 2025-10-12 17:44:07,013 | INFO     | architecture information:
[2025-10-12 13:45:11] 2025-10-12 17:44:07,013 | INFO     | executing command: cat /etc/os-release
[2025-10-12 13:45:11] 2025-10-12 17:44:07,030 | INFO     | cat /etc/os-release:
[2025-10-12 13:45:11] NAME="CentOS Linux"
[2025-10-12 13:45:11] VERSION="7 (Core)"
[2025-10-12 13:45:11] ID="centos"
[2025-10-12 13:45:11] ID_LIKE="rhel fedora"
[2025-10-12 13:45:11] VERSION_ID="7"
[2025-10-12 13:45:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 13:45:11] ANSI_COLOR="0;31"
[2025-10-12 13:45:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 13:45:11] HOME_URL="https://www.centos.org/"
[2025-10-12 13:45:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 13:45:11] 
[2025-10-12 13:45:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 13:45:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 13:45:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 13:45:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 13:45:11] 
[2025-10-12 13:45:11] 2025-10-12 17:44:07,031 | INFO     | ***************************************
[2025-10-12 13:45:11] 2025-10-12 17:44:07,534 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 13:45:11] 2025-10-12 17:44:07,554 | INFO     | sufficient remaining disk space (18555600896 B)
[2025-10-12 13:45:11] 2025-10-12 17:44:07,554 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 13:45:11] 2025-10-12 17:44:07,555 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 13:45:11] 2025-10-12 17:44:07,555 | INFO     | update_server=False
[2025-10-12 13:45:11] 2025-10-12 17:44:07,555 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 13:45:11] 2025-10-12 17:44:07,555 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:45:11] 2025-10-12 17:44:07,600 | INFO     | all job control threads have been joined
[2025-10-12 13:45:11] 2025-10-12 17:44:07,917 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 13:45:11] 2025-10-12 17:44:07,996 | INFO     | all data control threads have been joined
[2025-10-12 13:45:11] 2025-10-12 17:44:08,348 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:45:11] 2025-10-12 17:44:08,349 | INFO     | aborting loop
[2025-10-12 13:45:11] 2025-10-12 17:44:08,360 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 13:45:11] 2025-10-12 17:44:08,527 | INFO     | all payload control threads have been joined
[2025-10-12 13:45:11] 2025-10-12 17:44:08,561 | INFO     | [job] retrieve thread has finished
[2025-10-12 13:45:11] 2025-10-12 17:44:08,561 | INFO     | [job] queue monitor thread has finished
[2025-10-12 13:45:11] 2025-10-12 17:44:08,606 | INFO     | [job] control thread has finished
[2025-10-12 13:45:11] 2025-10-12 17:44:08,976 | INFO     | [data] copytool_in thread has finished
[2025-10-12 13:45:11] 2025-10-12 17:44:08,995 | INFO     | [job] validate thread has finished
[2025-10-12 13:45:11] 2025-10-12 17:44:09,001 | INFO     | [data] control thread has finished
[2025-10-12 13:45:11] 2025-10-12 17:44:09,082 | INFO     | [payload] validate_post thread has finished
[2025-10-12 13:45:11] 2025-10-12 17:44:09,334 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 13:45:11] 2025-10-12 17:44:09,344 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 13:45:11] 2025-10-12 17:44:09,354 | INFO     | [job] job monitor thread has finished
[2025-10-12 13:45:11] 2025-10-12 17:44:09,533 | INFO     | [payload] control thread has finished
[2025-10-12 13:45:11] 2025-10-12 17:44:09,549 | INFO     | [payload] failed_post thread has finished
[2025-10-12 13:45:11] 2025-10-12 17:44:09,563 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 13:45:11] 2025-10-12 17:44:09,623 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 13:45:11] 2025-10-12 17:44:10,366 | INFO     | [data] copytool_out thread has finished
[2025-10-12 13:45:11] 2025-10-12 17:44:11,923 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 13:45:11] 2025-10-12 17:44:38,518 | INFO     | PID=13817 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 13:45:11] 2025-10-12 17:44:38,519 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 13:45:11] 2025-10-12 17:44:38,519 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 13:45:11] 2025-10-12 17:44:38,519 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 13:45:11] 2025-10-12 17:45:04,119 | INFO     | [monitor] cgroup control has ended
[2025-10-12 13:45:11] 2025-10-12 17:45:06,150 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139862021838656)>', '<ExcThread(monitor, started 139861298239232)>']
[2025-10-12 13:45:11] 2025-10-12 17:45:06,659 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 13:45:11] 2025-10-12 17:45:06,660 | INFO     | [monitor] control thread has ended
[2025-10-12 13:45:11] 2025-10-12 17:45:11,159 | INFO     | all workflow threads have been joined
[2025-10-12 13:45:11] 2025-10-12 17:45:11,159 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 13:45:11] 2025-10-12 17:45:11,160 | INFO     | traces error code: 0
[2025-10-12 13:45:11] 2025-10-12 17:45:11,160 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 13:45:11] 2025-10-12 17:45:11,282 [wrapper] ==== pilot stdout END ====
[2025-10-12 13:45:11] 2025-10-12 17:45:11,287 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 13:45:11] 2025-10-12 17:45:11,291 [wrapper] pilotpid: 13817
[2025-10-12 13:45:11] 2025-10-12 17:45:11,296 [wrapper] Pilot exit status: 0
[2025-10-12 13:45:11] 2025-10-12 17:45:11,314 [wrapper] pandaids: 6840181684
[2025-10-12 13:45:11] 2025-10-12 17:45:11,367 [wrapper] cleanup supervisor_pilot 16580 13818
[2025-10-12 13:45:11] 2025-10-12 17:45:11,371 [wrapper] Test setup, not cleaning
[2025-10-12 13:45:11] 2025-10-12 17:45:11,376 [wrapper] apfmon messages muted
[2025-10-12 13:45:11] 2025-10-12 17:45:11,381 [wrapper] ==== wrapper stdout END ====
[2025-10-12 13:45:11] 2025-10-12 17:45:11,385 [wrapper] ==== wrapper stderr END ====
[2025-10-12 13:45:11]  *** Error codes and diagnostics ***
[2025-10-12 13:45:11]     "exeErrorCode": 0,
[2025-10-12 13:45:11]     "exeErrorDiag": "",
[2025-10-12 13:45:11]     "pilotErrorCode": 0,
[2025-10-12 13:45:11]     "pilotErrorDiag": "",
[2025-10-12 13:45:11]  *** Listing of results directory ***
[2025-10-12 13:45:11] total 413956
[2025-10-12 13:45:11] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 09:55 pilot3.tar.gz
[2025-10-12 13:45:11] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 10:18 queuedata.json
[2025-10-12 13:45:11] -rwx------ 1 boincer umatlas     36292 Oct 12 10:19 runpilot2-wrapper.sh
[2025-10-12 13:45:11] -rw-r--r-- 1 boincer umatlas       100 Oct 12 11:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 13:45:11] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 11:36 run_atlas
[2025-10-12 13:45:11] -rw-r--r-- 1 boincer umatlas       105 Oct 12 11:36 job.xml
[2025-10-12 13:45:11] -rw-r--r-- 2 boincer umatlas 218681952 Oct 12 11:36 EVNT.46676267._004227.pool.root.1
[2025-10-12 13:45:11] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 11:36 start_atlas.sh
[2025-10-12 13:45:11] drwxrwx--x 2 boincer umatlas      4096 Oct 12 11:36 shared
[2025-10-12 13:45:11] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 11:36 input.tar.gz
[2025-10-12 13:45:11] -rw-r--r-- 1 boincer umatlas         0 Oct 12 11:36 boinc_lockfile
[2025-10-12 13:45:11] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 11:36 pandaJob.out
[2025-10-12 13:45:11] -rw------- 1 boincer umatlas    975528 Oct 12 11:36 agis_schedconf.cvmfs.json
[2025-10-12 13:45:11] -rw------- 1 boincer umatlas   1560580 Oct 12 11:36 agis_ddmendpoints.agis.ALL.json
[2025-10-12 13:45:11] drwx------ 5 boincer umatlas      4096 Oct 12 11:36 pilot3
[2025-10-12 13:45:11] -rw-r--r-- 1 boincer umatlas      5909 Oct 12 13:39 init_data.xml
[2025-10-12 13:45:11] -rw------- 1 boincer umatlas 198392491 Oct 12 13:43 HITS.46676269._080559.pool.root.1
[2025-10-12 13:45:11] -rw-r--r-- 1 boincer umatlas       529 Oct 12 13:43 boinc_task_state.xml
[2025-10-12 13:45:11] -rw------- 1 boincer umatlas        95 Oct 12 13:43 pilot_heartbeat.json
[2025-10-12 13:45:11] -rw------- 1 boincer umatlas      1051 Oct 12 13:43 memory_monitor_summary.json
[2025-10-12 13:45:11] -rw------- 1 boincer umatlas    383789 Oct 12 13:43 log.46676269._080559.job.log.tgz.1
[2025-10-12 13:45:11] -rw------- 1 boincer umatlas      7854 Oct 12 13:44 heartbeat.json
[2025-10-12 13:45:11] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 13:45 boinc_mmap_file
[2025-10-12 13:45:11] -rw-r--r-- 1 boincer umatlas        27 Oct 12 13:45 wrapper_checkpoint.txt
[2025-10-12 13:45:11] -rw------- 1 boincer umatlas      4746 Oct 12 13:45 pilotlog.txt
[2025-10-12 13:45:11] -rw------- 1 boincer umatlas   1072974 Oct 12 13:45 log.46676269._080559.job.log.1
[2025-10-12 13:45:11] -rw------- 1 boincer umatlas       357 Oct 12 13:45 output.list
[2025-10-12 13:45:11] -rw-r--r-- 1 boincer umatlas       620 Oct 12 13:45 runtime_log
[2025-10-12 13:45:11] -rw------- 1 boincer umatlas   1474560 Oct 12 13:45 result.tar.gz
[2025-10-12 13:45:11] -rw------- 1 boincer umatlas       659 Oct 12 13:45 XRRMDmI6BS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmYDkNDmQ7FJzn.diag
[2025-10-12 13:45:11] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 13:45 runtime_log.err
[2025-10-12 13:45:11] -rw-r--r-- 1 boincer umatlas     20872 Oct 12 13:45 stderr.txt
[2025-10-12 13:45:11] HITS file was successfully produced:
[2025-10-12 13:45:11] -rw------- 1 boincer umatlas 198392491 Oct 12 13:43 shared/HITS.pool.root.1
[2025-10-12 13:45:11]  *** Contents of shared directory: ***
[2025-10-12 13:45:11] total 409328
[2025-10-12 13:45:11] -rw-r--r-- 2 boincer umatlas 218681952 Oct 12 11:36 ATLAS.root_0
[2025-10-12 13:45:11] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 11:36 start_atlas.sh
[2025-10-12 13:45:11] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 11:36 input.tar.gz
[2025-10-12 13:45:11] -rw------- 1 boincer umatlas 198392491 Oct 12 13:43 HITS.pool.root.1
[2025-10-12 13:45:11] -rw------- 1 boincer umatlas   1474560 Oct 12 13:45 result.tar.gz
13:45:12 (10100): run_atlas exited; CPU time 56399.489735
13:45:12 (10100): called boinc_finish(0)

</stderr_txt>
]]>

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