Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:36:25 (5497): wrapper (7.7.26015): starting
11:36:25 (5497): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 11:36:25] Arguments: --nthreads 12
[2025-10-12 11:36:25] Threads: 12
[2025-10-12 11:36:25] Checking for CVMFS
[2025-10-12 11:36:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 11:36:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 11:36:25] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 11:36:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 11:36:25] 2.11.2.0 2933 223070 98884 151625 2 57 15330740 20275201 1 130560 2 107515266 99.983 13093647 12465 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 11:36:25] CVMFS is ok
[2025-10-12 11:36:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 11:36:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 11:36:25] Further information can be found at the LHC@home message board.
[2025-10-12 11:36:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 11:36:25] Checking for apptainer binary...
[2025-10-12 11:36:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 11:36:25] Running /usr/bin/apptainer --version
[2025-10-12 11:36:25] apptainer version 1.3.2-1.el7
[2025-10-12 11:36:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 11:36:27] c-205-15.aglt2.org
[2025-10-12 11:36:27] apptainer works
[2025-10-12 11:36:27] Set ATHENA_PROC_NUMBER=12
[2025-10-12 11:36:27] Set ATHENA_CORE_NUMBER=12
[2025-10-12 11:36:27] Starting ATLAS job with PandaID=6839927885
[2025-10-12 11:36:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 12:48:01]  *** The last 200 lines of the pilot log: ***
[2025-10-12 12:48:01]  scope=mc23_13p6TeV
[2025-10-12 12:48:01]  status=None
[2025-10-12 12:48:01]  status_code=0
[2025-10-12 12:48:01]  storage_token=
[2025-10-12 12:48:01]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6839927885/log.46676269._077424.job.log.tgz.1
[2025-10-12 12:48:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8b/dc/log.46676269._077424.job.log.tgz.1
[2025-10-12 12:48:01]  workdir=None
[2025-10-12 12:48:01] ]
[2025-10-12 12:48:01] 2025-10-12 16:47:23,000 | INFO     | transferring file log.46676269._077424.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6839927885/log.46676269._077424.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 12:48:01] 2025-10-12 16:47:23,000 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6839927885/log.46676269._077424.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._077424.job
[2025-10-12 12:48:01] 2025-10-12 16:47:23,022 | INFO     | adding to output.list: log.46676269._077424.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8b/dc/log.46676269._077424.job.log.tg
[2025-10-12 12:48:01] 2025-10-12 16:47:23,023 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 12:48:01] 2025-10-12 16:47:23,023 | INFO     | summary of transferred files:
[2025-10-12 12:48:01] 2025-10-12 16:47:23,023 | INFO     |  -- lfn=log.46676269._077424.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 12:48:01] 2025-10-12 16:47:23,024 | INFO     | stage-out finished correctly
[2025-10-12 12:48:01] 2025-10-12 16:47:23,450 | INFO     | monitor loop #315: job 0:6839927885 is in state 'finished'
[2025-10-12 12:48:01] 2025-10-12 16:47:23,450 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 12:48:01] 2025-10-12 16:47:23,854 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 12:48:01] 2025-10-12 16:47:23,937 | INFO     | time since job start (4241s) is within the limit (172800.0s)
[2025-10-12 12:48:01] 2025-10-12 16:47:24,290 | INFO     | job 6839927885 has state=finished
[2025-10-12 12:48:01] 2025-10-12 16:47:24,290 | INFO     | preparing for final server update for job 6839927885 in state='finished'
[2025-10-12 12:48:01] 2025-10-12 16:47:24,291 | INFO     | this job has now completed (state=finished)
[2025-10-12 12:48:01] 2025-10-12 16:47:24,291 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 12:48:01] 2025-10-12 16:47:24,291 | INFO     | log transfer has been attempted: DONE
[2025-10-12 12:48:01] 2025-10-12 16:47:24,292 | INFO     | job 6839927885 has finished - writing final server update
[2025-10-12 12:48:01] 2025-10-12 16:47:24,292 | INFO     | total number of processed events: 400 (read)
[2025-10-12 12:48:01] 2025-10-12 16:47:24,293 | INFO     | executing command: lscpu
[2025-10-12 12:48:01] 2025-10-12 16:47:24,319 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 12:48:01] 2025-10-12 16:47:25,943 | INFO     | time since job start (4243s) is within the limit (172800.0s)
[2025-10-12 12:48:01] 2025-10-12 16:47:25,953 | INFO     | monitor loop #316: job 0:6839927885 is in state 'finished'
[2025-10-12 12:48:01] 2025-10-12 16:47:25,954 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 12:48:01] 2025-10-12 16:47:27,946 | INFO     | time since job start (4245s) is within the limit (172800.0s)
[2025-10-12 12:48:01] 2025-10-12 16:47:28,457 | INFO     | monitor loop #317: job 0:6839927885 is in state 'finished'
[2025-10-12 12:48:01] 2025-10-12 16:47:28,457 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 12:48:01] 2025-10-12 16:47:28,986 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 12:48:01] 2025-10-12 16:47:28,990 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-10-12 12:48:01] 2025-10-12 16:47:28,993 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839927885/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 12:48:01] 2025-10-12 16:47:28,994 | INFO     | extracted standard info from prmon json
[2025-10-12 12:48:01] 2025-10-12 16:47:28,994 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 12:48:01] 2025-10-12 16:47:28,994 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 12:48:01] 2025-10-12 16:47:28,995 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 12:48:01] 2025-10-12 16:47:28,995 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 12:48:01] 2025-10-12 16:47:28,996 | INFO     | fitting pss+swap vs Time
[2025-10-12 12:48:01] 2025-10-12 16:47:28,996 | INFO     | sum of square deviations: 73882315.5
[2025-10-12 12:48:01] 2025-10-12 16:47:28,997 | INFO     | sum of deviations: -4708868495.5
[2025-10-12 12:48:01] 2025-10-12 16:47:28,997 | INFO     | mean x: 1760285596.5
[2025-10-12 12:48:01] 2025-10-12 16:47:28,997 | INFO     | mean y: 2905817.209677419
[2025-10-12 12:48:01] 2025-10-12 16:47:28,997 | INFO     | -- intersect: 112194210764.07852
[2025-10-12 12:48:01] 2025-10-12 16:47:28,997 | INFO     | intersect: 112194210764.07852
[2025-10-12 12:48:01] 2025-10-12 16:47:28,997 | INFO     | chi2: 0.06599194442709698
[2025-10-12 12:48:01] 2025-10-12 16:47:28,998 | INFO     | -- intersect: 112194210764.07852
[2025-10-12 12:48:01] 2025-10-12 16:47:28,998 | INFO     | current memory leak: -63.73 B/s (using 62 data points, chi2=0.07)
[2025-10-12 12:48:01] 2025-10-12 16:47:28,998 | INFO     | could have reported an average CPU frequency of 2034 MHz (6 samples)
[2025-10-12 12:48:01] 2025-10-12 16:47:28,998 | INFO     | ..............................
[2025-10-12 12:48:01] 2025-10-12 16:47:28,998 | INFO     | . Timing measurements:
[2025-10-12 12:48:01] 2025-10-12 16:47:28,998 | INFO     | . get job = 0 s
[2025-10-12 12:48:01] 2025-10-12 16:47:28,998 | INFO     | . initial setup = 2 s
[2025-10-12 12:48:01] 2025-10-12 16:47:28,999 | INFO     | . payload setup = 7 s
[2025-10-12 12:48:01] 2025-10-12 16:47:28,999 | INFO     | . stage-in = 0 s
[2025-10-12 12:48:01] 2025-10-12 16:47:28,999 | INFO     | . payload execution = 4212 s
[2025-10-12 12:48:01] 2025-10-12 16:47:28,999 | INFO     | . stage-out = 0 s
[2025-10-12 12:48:01] 2025-10-12 16:47:28,999 | INFO     | . log creation = 0 s
[2025-10-12 12:48:01] 2025-10-12 16:47:28,999 | INFO     | ..............................
[2025-10-12 12:48:01] 2025-10-12 16:47:29,080 | INFO     | 
[2025-10-12 12:48:01] 2025-10-12 16:47:29,080 | INFO     | job summary report
[2025-10-12 12:48:01] 2025-10-12 16:47:29,080 | INFO     | --------------------------------------------------
[2025-10-12 12:48:01] 2025-10-12 16:47:29,081 | INFO     | PanDA job id: 6839927885
[2025-10-12 12:48:01] 2025-10-12 16:47:29,081 | INFO     | task id: 46676269
[2025-10-12 12:48:01] 2025-10-12 16:47:29,081 | INFO     | errors: (none)
[2025-10-12 12:48:01] 2025-10-12 16:47:29,081 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 12:48:01] 2025-10-12 16:47:29,081 | INFO     | pilot state: finished 
[2025-10-12 12:48:01] 2025-10-12 16:47:29,081 | INFO     | transexitcode: 0
[2025-10-12 12:48:01] 2025-10-12 16:47:29,081 | INFO     | exeerrorcode: 0
[2025-10-12 12:48:01] 2025-10-12 16:47:29,082 | INFO     | exeerrordiag: 
[2025-10-12 12:48:01] 2025-10-12 16:47:29,082 | INFO     | exitcode: 0
[2025-10-12 12:48:01] 2025-10-12 16:47:29,082 | INFO     | exitmsg: OK
[2025-10-12 12:48:01] 2025-10-12 16:47:29,082 | INFO     | cpuconsumptiontime: 46276 s
[2025-10-12 12:48:01] 2025-10-12 16:47:29,082 | INFO     | nevents: 400
[2025-10-12 12:48:01] 2025-10-12 16:47:29,083 | INFO     | neventsw: 0
[2025-10-12 12:48:01] 2025-10-12 16:47:29,083 | INFO     | pid: 16448
[2025-10-12 12:48:01] 2025-10-12 16:47:29,083 | INFO     | pgrp: 16448
[2025-10-12 12:48:01] 2025-10-12 16:47:29,083 | INFO     | corecount: 12
[2025-10-12 12:48:01] 2025-10-12 16:47:29,083 | INFO     | event service: False
[2025-10-12 12:48:01] 2025-10-12 16:47:29,083 | INFO     | sizes: {0: 2348630, 1: 2348885, 6: 2349147, 12: 2349175, 4223: 2375072, 4225: 2384070, 4226: 2384254, 4231: 2384448}
[2025-10-12 12:48:01] 2025-10-12 16:47:29,084 | INFO     | --------------------------------------------------
[2025-10-12 12:48:01] 2025-10-12 16:47:29,084 | INFO     | 
[2025-10-12 12:48:01] 2025-10-12 16:47:29,084 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 12:48:01] 2025-10-12 16:47:29,109 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 12:48:01] 2025-10-12 16:47:29,109 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 12:48:01] 2025-10-12 16:47:29,109 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 12:48:01] 2025-10-12 16:47:29,109 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 12:48:01] 2025-10-12 16:47:29,109 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 12:48:01] 2025-10-12 16:47:29,110 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 12:48:01] 2025-10-12 16:47:29,110 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 12:48:01] 2025-10-12 16:47:29,110 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 12:48:01] 2025-10-12 16:47:29,110 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 12:48:01] 2025-10-12 16:47:29,110 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 12:48:01] 2025-10-12 16:47:29,110 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 12:48:01] 2025-10-12 16:47:29,111 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 12:48:01] 2025-10-12 16:47:29,111 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 12:48:01] 2025-10-12 16:47:29,111 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 12:48:01] 2025-10-12 16:47:29,111 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 12:48:01] 2025-10-12 16:47:29,111 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 12:48:01] 2025-10-12 16:47:29,111 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 12:48:01] 2025-10-12 16:47:29,112 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 12:48:01] 2025-10-12 16:47:29,112 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 12:48:01] 2025-10-12 16:47:29,112 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 12:48:01] 2025-10-12 16:47:29,112 | INFO     | job 6839927885 has completed (purged errors)
[2025-10-12 12:48:01] 2025-10-12 16:47:29,112 | INFO     | overall cleanup function is called
[2025-10-12 12:48:01] 2025-10-12 16:47:30,120 | INFO     | --- collectZombieJob: --- 10, [16448]
[2025-10-12 12:48:01] 2025-10-12 16:47:30,121 | INFO     | zombie collector waiting for pid 16448
[2025-10-12 12:48:01] 2025-10-12 16:47:30,121 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 12:48:01] 2025-10-12 16:47:30,121 | INFO     | collected zombie processes
[2025-10-12 12:48:01] 2025-10-12 16:47:30,121 | INFO     | will attempt to kill all subprocesses of pid=16448
[2025-10-12 12:48:01] 2025-10-12 16:47:30,211 | INFO     | process IDs to be killed: [16448] (in reverse order)
[2025-10-12 12:48:01] 2025-10-12 16:47:30,263 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 12:48:01] 2025-10-12 16:47:30,264 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 12:48:01] 2025-10-12 16:47:30,266 | INFO     | did not find any defunct processes belonging to 16448
[2025-10-12 12:48:01] 2025-10-12 16:47:30,269 | INFO     | did not find any defunct processes belonging to 16448
[2025-10-12 12:48:01] 2025-10-12 16:47:30,269 | INFO     | ready for new job
[2025-10-12 12:48:01] 2025-10-12 16:47:30,269 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 12:48:01] 2025-10-12 16:47:30,270 | INFO     | ***************************************
[2025-10-12 12:48:01] 2025-10-12 16:47:30,270 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 12:48:01] 2025-10-12 16:47:30,271 | INFO     | ***************************************
[2025-10-12 12:48:01] 2025-10-12 16:47:30,271 | INFO     | 
[2025-10-12 12:48:01] 2025-10-12 16:47:30,271 | INFO     | architecture information:
[2025-10-12 12:48:01] 2025-10-12 16:47:30,272 | INFO     | executing command: cat /etc/os-release
[2025-10-12 12:48:01] 2025-10-12 16:47:30,289 | INFO     | cat /etc/os-release:
[2025-10-12 12:48:01] NAME="CentOS Linux"
[2025-10-12 12:48:01] VERSION="7 (Core)"
[2025-10-12 12:48:01] ID="centos"
[2025-10-12 12:48:01] ID_LIKE="rhel fedora"
[2025-10-12 12:48:01] VERSION_ID="7"
[2025-10-12 12:48:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 12:48:01] ANSI_COLOR="0;31"
[2025-10-12 12:48:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 12:48:01] HOME_URL="https://www.centos.org/"
[2025-10-12 12:48:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 12:48:01] 
[2025-10-12 12:48:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 12:48:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 12:48:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 12:48:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 12:48:01] 
[2025-10-12 12:48:01] 2025-10-12 16:47:30,289 | INFO     | ***************************************
[2025-10-12 12:48:01] 2025-10-12 16:47:30,790 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 12:48:01] 2025-10-12 16:47:30,807 | INFO     | sufficient remaining disk space (29364322304 B)
[2025-10-12 12:48:01] 2025-10-12 16:47:30,808 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 12:48:01] 2025-10-12 16:47:30,808 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 12:48:01] 2025-10-12 16:47:30,808 | INFO     | update_server=False
[2025-10-12 12:48:01] 2025-10-12 16:47:30,808 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 12:48:01] 2025-10-12 16:47:30,809 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:48:01] 2025-10-12 16:47:30,809 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 12:48:01] 2025-10-12 16:47:30,960 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 12:48:01] 2025-10-12 16:47:30,960 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 12:48:01] 2025-10-12 16:47:30,961 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:48:01] 2025-10-12 16:47:30,961 | INFO     | will abort loop
[2025-10-12 12:48:01] 2025-10-12 16:47:31,014 | INFO     | all data control threads have been joined
[2025-10-12 12:48:01] 2025-10-12 16:47:31,116 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 12:48:01] 2025-10-12 16:47:31,811 | INFO     | [job] queue monitor thread has finished
[2025-10-12 12:48:01] 2025-10-12 16:47:31,814 | INFO     | [job] retrieve thread has finished
[2025-10-12 12:48:01] 2025-10-12 16:47:31,888 | INFO     | [data] copytool_in thread has finished
[2025-10-12 12:48:01] 2025-10-12 16:47:31,966 | INFO     | [job] job monitor thread has finished
[2025-10-12 12:48:01] 2025-10-12 16:47:32,019 | INFO     | [data] control thread has finished
[2025-10-12 12:48:01] 2025-10-12 16:47:32,068 | INFO     | all payload control threads have been joined
[2025-10-12 12:48:01] 2025-10-12 16:47:32,236 | INFO     | all job control threads have been joined
[2025-10-12 12:48:01] 2025-10-12 16:47:32,408 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 12:48:01] 2025-10-12 16:47:32,504 | INFO     | [job] validate thread has finished
[2025-10-12 12:48:01] 2025-10-12 16:47:32,523 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 12:48:01] 2025-10-12 16:47:32,825 | INFO     | [payload] failed_post thread has finished
[2025-10-12 12:48:01] 2025-10-12 16:47:33,073 | INFO     | [payload] control thread has finished
[2025-10-12 12:48:01] 2025-10-12 16:47:33,121 | INFO     | [data] copytool_out thread has finished
[2025-10-12 12:48:01] 2025-10-12 16:47:33,134 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 12:48:01] 2025-10-12 16:47:33,241 | INFO     | [job] control thread has finished
[2025-10-12 12:48:01] 2025-10-12 16:47:33,409 | INFO     | [payload] validate_post thread has finished
[2025-10-12 12:48:01] 2025-10-12 16:47:34,815 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 12:48:01] 2025-10-12 16:47:41,346 | INFO     | job.realtimelogging is not enabled
[2025-10-12 12:48:01] 2025-10-12 16:47:42,347 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 12:48:01] 2025-10-12 16:47:48,438 | INFO     | [monitor] cgroup control has ended
[2025-10-12 12:48:01] 2025-10-12 16:47:50,273 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139867591223104)>', '<ExcThread(monitor, started 139866843096832)>']
[2025-10-12 12:48:01] 2025-10-12 16:47:55,299 | INFO     | all workflow threads have been joined
[2025-10-12 12:48:01] 2025-10-12 16:47:55,299 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 12:48:01] 2025-10-12 16:47:55,299 | INFO     | traces error code: 0
[2025-10-12 12:48:01] 2025-10-12 16:47:55,300 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 12:48:01] 2025-10-12 16:48:01,148 | INFO     | PID=9913 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 12:48:01] 2025-10-12 16:48:01,149 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 12:48:01] 2025-10-12 16:48:01,149 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 12:48:01] 2025-10-12 16:48:01,149 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 12:48:01] 2025-10-12 16:48:01,149 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 12:48:01] 2025-10-12 16:48:01,149 | INFO     | [monitor] control thread has ended
[2025-10-12 12:48:01] 2025-10-12 16:48:01,248 [wrapper] ==== pilot stdout END ====
[2025-10-12 12:48:01] 2025-10-12 16:48:01,252 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 12:48:01] 2025-10-12 16:48:01,256 [wrapper] pilotpid: 9913
[2025-10-12 12:48:01] 2025-10-12 16:48:01,259 [wrapper] Pilot exit status: 0
[2025-10-12 12:48:01] 2025-10-12 16:48:01,272 [wrapper] pandaids: 6839927885
[2025-10-12 12:48:01] 2025-10-12 16:48:01,309 [wrapper] cleanup supervisor_pilot 23230 9914
[2025-10-12 12:48:01] 2025-10-12 16:48:01,313 [wrapper] Test setup, not cleaning
[2025-10-12 12:48:01] 2025-10-12 16:48:01,316 [wrapper] apfmon messages muted
[2025-10-12 12:48:01] 2025-10-12 16:48:01,320 [wrapper] ==== wrapper stdout END ====
[2025-10-12 12:48:01] 2025-10-12 16:48:01,323 [wrapper] ==== wrapper stderr END ====
[2025-10-12 12:48:01]  *** Error codes and diagnostics ***
[2025-10-12 12:48:01]     "exeErrorCode": 0,
[2025-10-12 12:48:01]     "exeErrorDiag": "",
[2025-10-12 12:48:01]     "pilotErrorCode": 0,
[2025-10-12 12:48:01]     "pilotErrorDiag": "",
[2025-10-12 12:48:01]  *** Listing of results directory ***
[2025-10-12 12:48:01] total 411340
[2025-10-12 12:48:01] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 07:23 pilot3.tar.gz
[2025-10-12 12:48:01] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 07:50 queuedata.json
[2025-10-12 12:48:01] -rwx------ 1 boincer umatlas     36292 Oct 12 07:51 runpilot2-wrapper.sh
[2025-10-12 12:48:01] -rw-r--r-- 1 boincer umatlas       100 Oct 12 11:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 12:48:01] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 11:36 run_atlas
[2025-10-12 12:48:01] -rw-r--r-- 1 boincer umatlas       105 Oct 12 11:36 job.xml
[2025-10-12 12:48:01] -rw-r--r-- 2 boincer umatlas 221566710 Oct 12 11:36 EVNT.46676267._003706.pool.root.1
[2025-10-12 12:48:01] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 11:36 start_atlas.sh
[2025-10-12 12:48:01] drwxrwx--x 2 boincer umatlas      4096 Oct 12 11:36 shared
[2025-10-12 12:48:01] -rw-r--r-- 2 boincer umatlas    569684 Oct 12 11:36 input.tar.gz
[2025-10-12 12:48:01] -rw-r--r-- 1 boincer umatlas         0 Oct 12 11:36 boinc_lockfile
[2025-10-12 12:48:01] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 11:36 pandaJob.out
[2025-10-12 12:48:01] -rw------- 1 boincer umatlas    975528 Oct 12 11:36 agis_schedconf.cvmfs.json
[2025-10-12 12:48:01] -rw------- 1 boincer umatlas   1560580 Oct 12 11:36 agis_ddmendpoints.agis.ALL.json
[2025-10-12 12:48:01] drwx------ 5 boincer umatlas      4096 Oct 12 11:36 pilot3
[2025-10-12 12:48:01] -rw------- 1 boincer umatlas 193732506 Oct 12 12:46 HITS.46676269._077424.pool.root.1
[2025-10-12 12:48:01] -rw-r--r-- 1 boincer umatlas       529 Oct 12 12:46 boinc_task_state.xml
[2025-10-12 12:48:01] -rw-r--r-- 1 boincer umatlas      5953 Oct 12 12:46 init_data.xml
[2025-10-12 12:48:01] -rw------- 1 boincer umatlas      1049 Oct 12 12:47 memory_monitor_summary.json
[2025-10-12 12:48:01] -rw------- 1 boincer umatlas    389808 Oct 12 12:47 log.46676269._077424.job.log.tgz.1
[2025-10-12 12:48:01] -rw------- 1 boincer umatlas      7856 Oct 12 12:47 heartbeat.json
[2025-10-12 12:48:01] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 12:47 boinc_mmap_file
[2025-10-12 12:48:01] -rw-r--r-- 1 boincer umatlas        27 Oct 12 12:47 wrapper_checkpoint.txt
[2025-10-12 12:48:01] -rw------- 1 boincer umatlas        95 Oct 12 12:48 pilot_heartbeat.json
[2025-10-12 12:48:01] -rw------- 1 boincer umatlas       744 Oct 12 12:48 pilotlog.txt
[2025-10-12 12:48:01] -rw------- 1 boincer umatlas    618697 Oct 12 12:48 log.46676269._077424.job.log.1
[2025-10-12 12:48:01] -rw------- 1 boincer umatlas       357 Oct 12 12:48 output.list
[2025-10-12 12:48:01] -rw-r--r-- 1 boincer umatlas       620 Oct 12 12:48 runtime_log
[2025-10-12 12:48:01] -rw------- 1 boincer umatlas   1024000 Oct 12 12:48 result.tar.gz
[2025-10-12 12:48:01] -rw-r--r-- 1 boincer umatlas      8705 Oct 12 12:48 runtime_log.err
[2025-10-12 12:48:01] -rw------- 1 boincer umatlas       659 Oct 12 12:48 J1IODm0m9R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmbgjNDmufnhXo.diag
[2025-10-12 12:48:01] -rw-r--r-- 1 boincer umatlas     21886 Oct 12 12:48 stderr.txt
[2025-10-12 12:48:01] HITS file was successfully produced:
[2025-10-12 12:48:01] -rw------- 1 boincer umatlas 193732506 Oct 12 12:46 shared/HITS.pool.root.1
[2025-10-12 12:48:01]  *** Contents of shared directory: ***
[2025-10-12 12:48:01] total 407148
[2025-10-12 12:48:01] -rw-r--r-- 2 boincer umatlas 221566710 Oct 12 11:36 ATLAS.root_0
[2025-10-12 12:48:01] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 11:36 start_atlas.sh
[2025-10-12 12:48:01] -rw-r--r-- 2 boincer umatlas    569684 Oct 12 11:36 input.tar.gz
[2025-10-12 12:48:01] -rw------- 1 boincer umatlas 193732506 Oct 12 12:46 HITS.pool.root.1
[2025-10-12 12:48:01] -rw------- 1 boincer umatlas   1024000 Oct 12 12:48 result.tar.gz
12:48:02 (5497): run_atlas exited; CPU time 46240.155922
12:48:02 (5497): called boinc_finish(0)

</stderr_txt>
]]>

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