Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
13:37:48 (323643): wrapper (7.7.26015): starting
13:37:48 (323643): wrapper: running run_atlas (--nthreads 5)
[2025-10-12 13:37:48] Arguments: --nthreads 5
[2025-10-12 13:37:48] Threads: 5
[2025-10-12 13:37:48] Checking for CVMFS
[2025-10-12 13:37:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 13:37:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 13:37:48] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 13:37:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 13:37:48] 2.11.0.0 2490241 3444 104792 151629 2 188 2673195 4096000 6401 130560 0 17386936 99.997 261131 5146 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 13:37:48] CVMFS is ok
[2025-10-12 13:37:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 13:37:48] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 13:37:48] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 13:37:48] Further information can be found at the LHC@home message board.
[2025-10-12 13:37:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 13:37:48] Checking for apptainer binary...
[2025-10-12 13:37:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 13:37:48] Running /usr/bin/apptainer --version
[2025-10-12 13:37:48] apptainer version 1.4.3
[2025-10-12 13:37:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 13:37:48] x32-linux4
[2025-10-12 13:37:48] apptainer works
[2025-10-12 13:37:48] Set ATHENA_PROC_NUMBER=5
[2025-10-12 13:37:48] Set ATHENA_CORE_NUMBER=5
[2025-10-12 13:37:48] Starting ATLAS job with PandaID=6840181638
[2025-10-12 13:37:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 15:35:13]  *** The last 200 lines of the pilot log: ***
[2025-10-12 15:35:13] 2025-10-12 19:34:27,453 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 15:35:13] 2025-10-12 19:34:27,453 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 15:35:13] 2025-10-12 19:34:27,455 | INFO     | fitting pss+swap vs Time
[2025-10-12 15:35:13] 2025-10-12 19:34:27,455 | INFO     | sum of square deviations: 471562330.0
[2025-10-12 15:35:13] 2025-10-12 19:34:27,456 | INFO     | sum of deviations: 1549684930.999999
[2025-10-12 15:35:13] 2025-10-12 19:34:27,456 | INFO     | mean x: 1760294175.0
[2025-10-12 15:35:13] 2025-10-12 19:34:27,456 | INFO     | mean y: 2312290.2260869564
[2025-10-12 15:35:13] 2025-10-12 19:34:27,456 | INFO     | -- intersect: -5782503806.353501
[2025-10-12 15:35:13] 2025-10-12 19:34:27,456 | INFO     | intersect: -5782503806.353501
[2025-10-12 15:35:13] 2025-10-12 19:34:27,456 | INFO     | chi2: 1.8826670987444851
[2025-10-12 15:35:13] 2025-10-12 19:34:27,456 | INFO     | sum of square deviations: 412686807.5
[2025-10-12 15:35:13] 2025-10-12 19:34:27,457 | INFO     | sum of deviations: 8286997772.499994
[2025-10-12 15:35:13] 2025-10-12 19:34:27,457 | INFO     | mean x: 1760294022.5
[2025-10-12 15:35:13] 2025-10-12 19:34:27,457 | INFO     | mean y: 2329103.845454545
[2025-10-12 15:35:13] 2025-10-12 19:34:27,457 | INFO     | -- intersect: -35345427059.65283
[2025-10-12 15:35:13] 2025-10-12 19:34:27,457 | INFO     | intersect: -35345427059.65283
[2025-10-12 15:35:13] 2025-10-12 19:34:27,457 | INFO     | chi2: 1.1329821816171826
[2025-10-12 15:35:13] 2025-10-12 19:34:27,457 | INFO     | current chi2=1.1329821816171826 (change=39.820365354408814 %)
[2025-10-12 15:35:13] 2025-10-12 19:34:27,457 | INFO     | sum of square deviations: 358927660.0
[2025-10-12 15:35:13] 2025-10-12 19:34:27,458 | INFO     | sum of deviations: 7908253805.000001
[2025-10-12 15:35:13] 2025-10-12 19:34:27,458 | INFO     | mean x: 1760293870.0
[2025-10-12 15:35:13] 2025-10-12 19:34:27,458 | INFO     | mean y: 2328030.161904762
[2025-10-12 15:35:13] 2025-10-12 19:34:27,458 | INFO     | -- intersect: -38782230104.32591
[2025-10-12 15:35:13] 2025-10-12 19:34:27,458 | INFO     | intersect: -38782230104.32591
[2025-10-12 15:35:13] 2025-10-12 19:34:27,458 | INFO     | chi2: 1.134971075463335
[2025-10-12 15:35:13] 2025-10-12 19:34:27,458 | INFO     | current chi2=1.134971075463335 (change=-0.17554502431041283 %)
[2025-10-12 15:35:13] 2025-10-12 19:34:27,458 | INFO     | right removable region: 104
[2025-10-12 15:35:13] 2025-10-12 19:34:27,458 | INFO     | sum of square deviations: 412686807.5
[2025-10-12 15:35:13] 2025-10-12 19:34:27,459 | INFO     | sum of deviations: -9393950010.5
[2025-10-12 15:35:13] 2025-10-12 19:34:27,459 | INFO     | mean x: 1760294327.5
[2025-10-12 15:35:13] 2025-10-12 19:34:27,459 | INFO     | mean y: 2339820.536363636
[2025-10-12 15:35:13] 2025-10-12 19:34:27,459 | INFO     | -- intersect: 40071749881.098366
[2025-10-12 15:35:13] 2025-10-12 19:34:27,459 | INFO     | intersect: 40071749881.098366
[2025-10-12 15:35:13] 2025-10-12 19:34:27,459 | INFO     | chi2: 0.7936933061098125
[2025-10-12 15:35:13] 2025-10-12 19:34:27,459 | INFO     | current chi2=0.7936933061098125 (change=57.842079110050236 %)
[2025-10-12 15:35:13] 2025-10-12 19:34:27,460 | INFO     | sum of square deviations: 358927660.0
[2025-10-12 15:35:13] 2025-10-12 19:34:27,460 | INFO     | sum of deviations: -7692143248.999999
[2025-10-12 15:35:13] 2025-10-12 19:34:27,460 | INFO     | mean x: 1760294480.0
[2025-10-12 15:35:13] 2025-10-12 19:34:27,460 | INFO     | mean y: 2334979.7333333334
[2025-10-12 15:35:13] 2025-10-12 19:34:27,460 | INFO     | -- intersect: 37727032208.65117
[2025-10-12 15:35:13] 2025-10-12 19:34:27,460 | INFO     | intersect: 37727032208.65117
[2025-10-12 15:35:13] 2025-10-12 19:34:27,460 | INFO     | chi2: 0.7909508065027421
[2025-10-12 15:35:13] 2025-10-12 19:34:27,460 | INFO     | current chi2=0.7909508065027421 (change=0.3455364415900669 %)
[2025-10-12 15:35:13] 2025-10-12 19:34:27,460 | INFO     | left removable region: 20
[2025-10-12 15:35:13] 2025-10-12 19:34:27,460 | INFO     | sum of square deviations: 183761585.0
[2025-10-12 15:35:13] 2025-10-12 19:34:27,461 | INFO     | sum of deviations: 350315070.0
[2025-10-12 15:35:13] 2025-10-12 19:34:27,461 | INFO     | mean x: 1760294449.5
[2025-10-12 15:35:13] 2025-10-12 19:34:27,461 | INFO     | mean y: 2349156.095238095
[2025-10-12 15:35:13] 2025-10-12 19:34:27,461 | INFO     | -- intersect: -3353399398.7357616
[2025-10-12 15:35:13] 2025-10-12 19:34:27,461 | INFO     | intersect: -3353399398.7357616
[2025-10-12 15:35:13] 2025-10-12 19:34:27,461 | INFO     | chi2: 7.434078641340836e-05
[2025-10-12 15:35:13] 2025-10-12 19:34:27,461 | INFO     | -- intersect: -3353399398.7357616
[2025-10-12 15:35:13] 2025-10-12 19:34:27,461 | INFO     | current memory leak: 1.91 B/s (using 84 data points, chi2=0.00)
[2025-10-12 15:35:13] 2025-10-12 19:34:27,461 | INFO     | could have reported an average CPU frequency of 3820 MHz (7 samples)
[2025-10-12 15:35:13] 2025-10-12 19:34:27,461 | INFO     | ..............................
[2025-10-12 15:35:13] 2025-10-12 19:34:27,462 | INFO     | . Timing measurements:
[2025-10-12 15:35:13] 2025-10-12 19:34:27,462 | INFO     | . get job = 0 s
[2025-10-12 15:35:13] 2025-10-12 19:34:27,462 | INFO     | . initial setup = 2 s
[2025-10-12 15:35:13] 2025-10-12 19:34:27,462 | INFO     | . payload setup = 3 s
[2025-10-12 15:35:13] 2025-10-12 19:34:27,462 | INFO     | . stage-in = 0 s
[2025-10-12 15:35:13] 2025-10-12 19:34:27,462 | INFO     | . payload execution = 6964 s
[2025-10-12 15:35:13] 2025-10-12 19:34:27,462 | INFO     | . stage-out = 0 s
[2025-10-12 15:35:13] 2025-10-12 19:34:27,462 | INFO     | . log creation = 0 s
[2025-10-12 15:35:13] 2025-10-12 19:34:27,462 | INFO     | ..............................
[2025-10-12 15:35:13] 2025-10-12 19:34:27,530 | INFO     | 
[2025-10-12 15:35:13] 2025-10-12 19:34:27,530 | INFO     | job summary report
[2025-10-12 15:35:13] 2025-10-12 19:34:27,530 | INFO     | --------------------------------------------------
[2025-10-12 15:35:13] 2025-10-12 19:34:27,530 | INFO     | PanDA job id: 6840181638
[2025-10-12 15:35:13] 2025-10-12 19:34:27,530 | INFO     | task id: 46676269
[2025-10-12 15:35:13] 2025-10-12 19:34:27,530 | INFO     | errors: (none)
[2025-10-12 15:35:13] 2025-10-12 19:34:27,531 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 15:35:13] 2025-10-12 19:34:27,531 | INFO     | pilot state: finished 
[2025-10-12 15:35:13] 2025-10-12 19:34:27,531 | INFO     | transexitcode: 0
[2025-10-12 15:35:13] 2025-10-12 19:34:27,531 | INFO     | exeerrorcode: 0
[2025-10-12 15:35:13] 2025-10-12 19:34:27,531 | INFO     | exeerrordiag: 
[2025-10-12 15:35:13] 2025-10-12 19:34:27,531 | INFO     | exitcode: 0
[2025-10-12 15:35:13] 2025-10-12 19:34:27,531 | INFO     | exitmsg: OK
[2025-10-12 15:35:13] 2025-10-12 19:34:27,531 | INFO     | cpuconsumptiontime: 27381 s
[2025-10-12 15:35:13] 2025-10-12 19:34:27,531 | INFO     | nevents: 400
[2025-10-12 15:35:13] 2025-10-12 19:34:27,531 | INFO     | neventsw: 0
[2025-10-12 15:35:13] 2025-10-12 19:34:27,531 | INFO     | pid: 334124
[2025-10-12 15:35:13] 2025-10-12 19:34:27,531 | INFO     | pgrp: 334124
[2025-10-12 15:35:13] 2025-10-12 19:34:27,531 | INFO     | corecount: 5
[2025-10-12 15:35:13] 2025-10-12 19:34:27,531 | INFO     | event service: False
[2025-10-12 15:35:13] 2025-10-12 19:34:27,531 | INFO     | sizes: {0: 2348718, 1: 2348917, 4: 2349179, 11: 2349207, 6971: 2376512, 6972: 2385707, 6973: 2385707, 6977: 2385901}
[2025-10-12 15:35:13] 2025-10-12 19:34:27,531 | INFO     | --------------------------------------------------
[2025-10-12 15:35:13] 2025-10-12 19:34:27,531 | INFO     | 
[2025-10-12 15:35:13] 2025-10-12 19:34:27,532 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/4
[2025-10-12 15:35:13] 2025-10-12 19:34:27,547 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 15:35:13] 2025-10-12 19:34:27,547 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 15:35:13] 2025-10-12 19:34:27,547 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 15:35:13] 2025-10-12 19:34:27,547 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 15:35:13] 2025-10-12 19:34:27,547 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 15:35:13] 2025-10-12 19:34:27,547 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 15:35:13] 2025-10-12 19:34:27,547 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 15:35:13] 2025-10-12 19:34:27,547 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 15:35:13] 2025-10-12 19:34:27,547 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 15:35:13] 2025-10-12 19:34:27,547 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 15:35:13] 2025-10-12 19:34:27,547 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 15:35:13] 2025-10-12 19:34:27,547 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 15:35:13] 2025-10-12 19:34:27,547 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 15:35:13] 2025-10-12 19:34:27,547 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 15:35:13] 2025-10-12 19:34:27,547 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 15:35:13] 2025-10-12 19:34:27,547 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 15:35:13] 2025-10-12 19:34:27,548 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 15:35:13] 2025-10-12 19:34:27,548 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 15:35:13] 2025-10-12 19:34:27,548 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 15:35:13] 2025-10-12 19:34:27,548 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 15:35:13] 2025-10-12 19:34:27,548 | INFO     | job 6840181638 has completed (purged errors)
[2025-10-12 15:35:13] 2025-10-12 19:34:27,548 | INFO     | overall cleanup function is called
[2025-10-12 15:35:13] 2025-10-12 19:34:28,555 | INFO     | --- collectZombieJob: --- 10, [334124]
[2025-10-12 15:35:13] 2025-10-12 19:34:28,555 | INFO     | zombie collector waiting for pid 334124
[2025-10-12 15:35:13] 2025-10-12 19:34:28,555 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 15:35:13] 2025-10-12 19:34:28,555 | INFO     | collected zombie processes
[2025-10-12 15:35:13] 2025-10-12 19:34:28,555 | INFO     | will attempt to kill all subprocesses of pid=334124
[2025-10-12 15:35:13] 2025-10-12 19:34:28,699 | INFO     | process IDs to be killed: [334124] (in reverse order)
[2025-10-12 15:35:13] 2025-10-12 19:34:28,751 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 15:35:13] 2025-10-12 19:34:28,752 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 15:35:13] 2025-10-12 19:34:28,756 | INFO     | did not find any defunct processes belonging to 334124
[2025-10-12 15:35:13] 2025-10-12 19:34:28,759 | INFO     | did not find any defunct processes belonging to 334124
[2025-10-12 15:35:13] 2025-10-12 19:34:28,760 | INFO     | ready for new job
[2025-10-12 15:35:13] 2025-10-12 19:34:28,760 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 15:35:13] 2025-10-12 19:34:28,761 | INFO     | ***************************************
[2025-10-12 15:35:13] 2025-10-12 19:34:28,761 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 15:35:13] 2025-10-12 19:34:28,761 | INFO     | ***************************************
[2025-10-12 15:35:13] 2025-10-12 19:34:28,761 | INFO     | 
[2025-10-12 15:35:13] 2025-10-12 19:34:28,762 | INFO     | architecture information:
[2025-10-12 15:35:13] 2025-10-12 19:34:28,763 | INFO     | executing command: cat /etc/os-release
[2025-10-12 15:35:13] 2025-10-12 19:34:28,774 | INFO     | cat /etc/os-release:
[2025-10-12 15:35:13] NAME="CentOS Linux"
[2025-10-12 15:35:13] VERSION="7 (Core)"
[2025-10-12 15:35:13] ID="centos"
[2025-10-12 15:35:13] ID_LIKE="rhel fedora"
[2025-10-12 15:35:13] VERSION_ID="7"
[2025-10-12 15:35:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 15:35:13] ANSI_COLOR="0;31"
[2025-10-12 15:35:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 15:35:13] HOME_URL="https://www.centos.org/"
[2025-10-12 15:35:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 15:35:13] 
[2025-10-12 15:35:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 15:35:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 15:35:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 15:35:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 15:35:13] 
[2025-10-12 15:35:13] 2025-10-12 19:34:28,775 | INFO     | ***************************************
[2025-10-12 15:35:13] 2025-10-12 19:34:29,277 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/4
[2025-10-12 15:35:13] 2025-10-12 19:34:29,289 | INFO     | sufficient remaining disk space (148671299584 B)
[2025-10-12 15:35:13] 2025-10-12 19:34:29,289 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 15:35:13] 2025-10-12 19:34:29,289 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 15:35:13] 2025-10-12 19:34:29,289 | INFO     | update_server=False
[2025-10-12 15:35:13] 2025-10-12 19:34:29,289 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 15:35:13] 2025-10-12 19:34:29,289 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 15:35:13] 2025-10-12 19:34:29,289 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:35:13] 2025-10-12 19:34:29,289 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 15:35:13] 2025-10-12 19:34:29,455 | INFO     | all job control threads have been joined
[2025-10-12 15:35:13] 2025-10-12 19:34:29,654 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:35:13] 2025-10-12 19:34:29,654 | INFO     | aborting loop
[2025-10-12 15:35:13] 2025-10-12 19:34:29,871 | INFO     | all data control threads have been joined
[2025-10-12 15:35:13] 2025-10-12 19:34:30,291 | INFO     | [job] queue monitor thread has finished
[2025-10-12 15:35:13] 2025-10-12 19:34:30,291 | INFO     | [job] retrieve thread has finished
[2025-10-12 15:35:13] 2025-10-12 19:34:30,456 | INFO     | [job] control thread has finished
[2025-10-12 15:35:13] 2025-10-12 19:34:30,659 | INFO     | [job] job monitor thread has finished
[2025-10-12 15:35:13] 2025-10-12 19:34:30,684 | INFO     | [payload] failed_post thread has finished
[2025-10-12 15:35:13] 2025-10-12 19:34:30,725 | INFO     | all payload control threads have been joined
[2025-10-12 15:35:13] 2025-10-12 19:34:30,807 | INFO     | [job] validate thread has finished
[2025-10-12 15:35:13] 2025-10-12 19:34:30,876 | INFO     | [data] control thread has finished
[2025-10-12 15:35:13] 2025-10-12 19:34:30,928 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 15:35:13] 2025-10-12 19:34:31,196 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 15:35:13] 2025-10-12 19:34:31,253 | INFO     | [payload] validate_post thread has finished
[2025-10-12 15:35:13] 2025-10-12 19:34:31,294 | INFO     | [data] copytool_out thread has finished
[2025-10-12 15:35:13] 2025-10-12 19:34:31,361 | INFO     | [data] copytool_in thread has finished
[2025-10-12 15:35:13] 2025-10-12 19:34:31,730 | INFO     | [payload] control thread has finished
[2025-10-12 15:35:13] 2025-10-12 19:34:31,789 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 15:35:13] 2025-10-12 19:34:33,298 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 15:35:13] 2025-10-12 19:34:39,837 | INFO     | job.realtimelogging is not enabled
[2025-10-12 15:35:13] 2025-10-12 19:34:40,842 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 15:35:13] 2025-10-12 19:35:00,279 | INFO     | PID=327479 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 15:35:13] 2025-10-12 19:35:00,279 | INFO     | .. there are 7 such processes running
[2025-10-12 15:35:13] 2025-10-12 19:35:00,279 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 15:35:13] 2025-10-12 19:35:00,279 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 15:35:13] 2025-10-12 19:35:00,279 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 15:35:13] 2025-10-12 19:35:07,720 | INFO     | [monitor] cgroup control has ended
[2025-10-12 15:35:13] 2025-10-12 19:35:08,490 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130017525704512)>', '<ExcThread(monitor, started 130016872474368)>']
[2025-10-12 15:35:13] 2025-10-12 19:35:09,320 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 15:35:13] 2025-10-12 19:35:09,320 | INFO     | [monitor] control thread has ended
[2025-10-12 15:35:13] 2025-10-12 19:35:13,501 | INFO     | all workflow threads have been joined
[2025-10-12 15:35:13] 2025-10-12 19:35:13,502 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 15:35:13] 2025-10-12 19:35:13,502 | INFO     | traces error code: 0
[2025-10-12 15:35:13] 2025-10-12 19:35:13,502 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 15:35:13] 2025-10-12 19:35:13,576 [wrapper] ==== pilot stdout END ====
[2025-10-12 15:35:13] 2025-10-12 19:35:13,578 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 15:35:13] 2025-10-12 19:35:13,580 [wrapper] pilotpid: 327479
[2025-10-12 15:35:13] 2025-10-12 19:35:13,582 [wrapper] Pilot exit status: 0
[2025-10-12 15:35:13] 2025-10-12 19:35:13,588 [wrapper] pandaids: 6840181638
[2025-10-12 15:35:13] 2025-10-12 19:35:13,622 [wrapper] cleanup supervisor_pilot  488538 327480
[2025-10-12 15:35:13] 2025-10-12 19:35:13,625 [wrapper] Test setup, not cleaning
[2025-10-12 15:35:13] 2025-10-12 19:35:13,627 [wrapper] apfmon messages muted
[2025-10-12 15:35:13] 2025-10-12 19:35:13,628 [wrapper] ==== wrapper stdout END ====
[2025-10-12 15:35:13] 2025-10-12 19:35:13,630 [wrapper] ==== wrapper stderr END ====
[2025-10-12 15:35:13]  *** Error codes and diagnostics ***
[2025-10-12 15:35:13]     "exeErrorCode": 0,
[2025-10-12 15:35:13]     "exeErrorDiag": "",
[2025-10-12 15:35:13]     "pilotErrorCode": 0,
[2025-10-12 15:35:13]     "pilotErrorDiag": "",
[2025-10-12 15:35:13]  *** Listing of results directory ***
[2025-10-12 15:35:13] total 406816
[2025-10-12 15:35:13] -rw-r--r-- 1 boinc boinc    557409 Oct 12 09:55 pilot3.tar.gz
[2025-10-12 15:35:13] -rwx------ 1 boinc boinc     36292 Oct 12 10:18 runpilot2-wrapper.sh
[2025-10-12 15:35:13] -rw-r--r-- 1 boinc boinc      5112 Oct 12 10:18 queuedata.json
[2025-10-12 15:35:13] -rw-r--r-- 1 boinc boinc       100 Oct 12 13:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 15:35:13] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 13:37 run_atlas
[2025-10-12 15:35:13] -rw-r--r-- 1 boinc boinc       105 Oct 12 13:37 job.xml
[2025-10-12 15:35:13] -rw-r--r-- 2 boinc boinc 218825766 Oct 12 13:37 EVNT.46676267._004226.pool.root.1
[2025-10-12 15:35:13] -rw-r--r-- 2 boinc boinc     15120 Oct 12 13:37 start_atlas.sh
[2025-10-12 15:35:13] drwxrwx--x 2 boinc boinc      4096 Oct 12 13:37 shared
[2025-10-12 15:35:13] -rw-r--r-- 2 boinc boinc    569676 Oct 12 13:37 input.tar.gz
[2025-10-12 15:35:13] -rw-r--r-- 1 boinc boinc      9723 Oct 12 13:37 init_data.xml
[2025-10-12 15:35:13] -rw-r--r-- 1 boinc boinc         0 Oct 12 13:37 boinc_setup_complete
[2025-10-12 15:35:13] -rw-r--r-- 1 boinc boinc         0 Oct 12 13:37 boinc_lockfile
[2025-10-12 15:35:13] -rw-r--r-- 1 boinc boinc      2548 Oct 12 13:37 pandaJob.out
[2025-10-12 15:35:13] -rw------- 1 boinc boinc    975528 Oct 12 13:37 agis_schedconf.cvmfs.json
[2025-10-12 15:35:13] -rw------- 1 boinc boinc   1560580 Oct 12 13:37 agis_ddmendpoints.agis.ALL.json
[2025-10-12 15:35:13] drwx------ 5 boinc boinc      4096 Oct 12 13:37 pilot3
[2025-10-12 15:35:13] -rw------- 1 boinc boinc 191200311 Oct 12 15:33 HITS.46676269._080513.pool.root.1
[2025-10-12 15:35:13] -rw-r--r-- 1 boinc boinc       529 Oct 12 15:34 boinc_task_state.xml
[2025-10-12 15:35:13] -rw------- 1 boinc boinc      1024 Oct 12 15:34 memory_monitor_summary.json
[2025-10-12 15:35:13] -rw------- 1 boinc boinc    302431 Oct 12 15:34 log.46676269._080513.job.log.tgz.1
[2025-10-12 15:35:13] -rw------- 1 boinc boinc      7737 Oct 12 15:34 heartbeat.json
[2025-10-12 15:35:13] -rw-r--r-- 1 boinc boinc        27 Oct 12 15:34 wrapper_checkpoint.txt
[2025-10-12 15:35:13] -rw-r--r-- 1 boinc boinc      8192 Oct 12 15:34 boinc_mmap_file
[2025-10-12 15:35:13] -rw------- 1 boinc boinc        95 Oct 12 15:35 pilot_heartbeat.json
[2025-10-12 15:35:13] -rw------- 1 boinc boinc      4902 Oct 12 15:35 pilotlog.txt
[2025-10-12 15:35:13] -rw------- 1 boinc boinc   1015962 Oct 12 15:35 log.46676269._080513.job.log.1
[2025-10-12 15:35:13] -rw------- 1 boinc boinc       357 Oct 12 15:35 output.list
[2025-10-12 15:35:13] -rw-r--r-- 1 boinc boinc       620 Oct 12 15:35 runtime_log
[2025-10-12 15:35:13] -rw------- 1 boinc boinc   1341440 Oct 12 15:35 result.tar.gz
[2025-10-12 15:35:13] -rw-r--r-- 1 boinc boinc      8764 Oct 12 15:35 runtime_log.err
[2025-10-12 15:35:13] -rw------- 1 boinc boinc       644 Oct 12 15:35 JU6MDmJ5BS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyCkNDmSABMln.diag
[2025-10-12 15:35:13] -rw-r--r-- 1 boinc boinc     20947 Oct 12 15:35 stderr.txt
[2025-10-12 15:35:13] HITS file was successfully produced:
[2025-10-12 15:35:13] -rw------- 1 boinc boinc 191200311 Oct 12 15:33 shared/HITS.pool.root.1
[2025-10-12 15:35:13]  *** Contents of shared directory: ***
[2025-10-12 15:35:13] total 402316
[2025-10-12 15:35:13] -rw-r--r-- 2 boinc boinc 218825766 Oct 12 13:37 ATLAS.root_0
[2025-10-12 15:35:13] -rw-r--r-- 2 boinc boinc     15120 Oct 12 13:37 start_atlas.sh
[2025-10-12 15:35:13] -rw-r--r-- 2 boinc boinc    569676 Oct 12 13:37 input.tar.gz
[2025-10-12 15:35:13] -rw------- 1 boinc boinc 191200311 Oct 12 15:33 HITS.pool.root.1
[2025-10-12 15:35:13] -rw------- 1 boinc boinc   1341440 Oct 12 15:35 result.tar.gz
15:35:14 (323643): run_atlas exited; CPU time 27475.552707
15:35:14 (323643): called boinc_finish(0)

</stderr_txt>
]]>

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