Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:25:05 (2968068): wrapper (7.7.26015): starting
00:25:05 (2968068): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 00:25:05] Arguments: --nthreads 8
[2025-10-13 00:25:05] Threads: 8
[2025-10-13 00:25:05] Checking for CVMFS
[2025-10-13 00:25:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:25:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:25:05] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:25:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:25:05] 2.10.1.0 2217956 1972 72304 151640 1 56 2487246 4097024 0 130560 0 2065693 99.992 73381 20966 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-10-13 00:25:05] CVMFS is ok
[2025-10-13 00:25:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:25:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:25:05] Further information can be found at the LHC@home message board.
[2025-10-13 00:25:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:25:05] Checking for apptainer binary...
[2025-10-13 00:25:05] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/var/lib/snapd/snap/bin)
[2025-10-13 00:25:05] apptainer is not installed, using version from CVMFS
[2025-10-13 00:25:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:25:06] pckeatlas04
[2025-10-13 00:25:06] apptainer works
[2025-10-13 00:25:06] Set ATHENA_PROC_NUMBER=8
[2025-10-13 00:25:06] Set ATHENA_CORE_NUMBER=8
[2025-10-13 00:25:06] Starting ATLAS job with PandaID=6840181657
[2025-10-13 00:25:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 01:43:23]  *** The last 200 lines of the pilot log: ***
[2025-10-13 01:43:23]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 01:43:23]  replicas=None
[2025-10-13 01:43:23]  scope=mc23_13p6TeV
[2025-10-13 01:43:23]  status=None
[2025-10-13 01:43:23]  status_code=0
[2025-10-13 01:43:23]  storage_token=
[2025-10-13 01:43:23]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6840181657/log.46676269._080532.job.log.tgz.1
[2025-10-13 01:43:23]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/38/96/log.46676269._080532.job.log.tgz.1
[2025-10-13 01:43:23]  workdir=None
[2025-10-13 01:43:23] ]
[2025-10-13 01:43:23] 2025-10-12 23:42:35,389 | INFO     | transferring file log.46676269._080532.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6840181657/log.46676269._080532.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-13 01:43:23] 2025-10-12 23:42:35,389 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6840181657/log.46676269._080532.job.log.tgz.1 /var/lib/boinc/slots/0/log.46676269._080532.job
[2025-10-13 01:43:23] 2025-10-12 23:42:35,397 | INFO     | adding to output.list: log.46676269._080532.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/38/96/log.46676269._080532.job.log.tg
[2025-10-13 01:43:23] 2025-10-12 23:42:35,398 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 01:43:23] 2025-10-12 23:42:35,398 | INFO     | summary of transferred files:
[2025-10-13 01:43:23] 2025-10-12 23:42:35,398 | INFO     |  -- lfn=log.46676269._080532.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 01:43:23] 2025-10-12 23:42:35,398 | INFO     | stage-out finished correctly
[2025-10-13 01:43:23] 2025-10-12 23:42:36,135 | INFO     | time since job start (4646s) is within the limit (172800.0s)
[2025-10-13 01:43:23] 2025-10-12 23:42:38,140 | INFO     | time since job start (4648s) is within the limit (172800.0s)
[2025-10-13 01:43:23] 2025-10-12 23:42:38,672 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 01:43:23] 2025-10-12 23:42:38,706 | INFO     | job 6840181657 has state=finished
[2025-10-13 01:43:23] 2025-10-12 23:42:38,707 | INFO     | preparing for final server update for job 6840181657 in state='finished'
[2025-10-13 01:43:23] 2025-10-12 23:42:38,707 | INFO     | this job has now completed (state=finished)
[2025-10-13 01:43:23] 2025-10-12 23:42:38,707 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 01:43:23] 2025-10-12 23:42:38,707 | INFO     | log transfer has been attempted: DONE
[2025-10-13 01:43:23] 2025-10-12 23:42:38,707 | INFO     | job 6840181657 has finished - writing final server update
[2025-10-13 01:43:23] 2025-10-12 23:42:38,707 | INFO     | total number of processed events: 400 (read)
[2025-10-13 01:43:23] 2025-10-12 23:42:38,708 | INFO     | executing command: lscpu
[2025-10-13 01:43:23] 2025-10-12 23:42:38,715 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 01:43:23] 2025-10-12 23:42:40,146 | INFO     | time since job start (4650s) is within the limit (172800.0s)
[2025-10-13 01:43:23] 2025-10-12 23:42:41,689 | WARNING  | process 2979095 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 01:43:23] 2025-10-12 23:42:41,689 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6840181657/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 01:43:23] 2025-10-12 23:42:41,732 | INFO     | number of running child processes to parent process 2979095: 1
[2025-10-13 01:43:23] 2025-10-12 23:42:41,732 | INFO     | maximum number of monitored processes: 6
[2025-10-13 01:43:23] 2025-10-12 23:42:42,151 | INFO     | time since job start (4652s) is within the limit (172800.0s)
[2025-10-13 01:43:23] 2025-10-12 23:42:42,850 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 01:43:23] 2025-10-12 23:42:42,851 | INFO     | found 4 cores (4 cores per socket, 1 socket) HT, CPU MHz: 3833.60525
[2025-10-13 01:43:23] 2025-10-12 23:42:42,852 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6840181657/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 01:43:23] 2025-10-12 23:42:42,852 | INFO     | extracted standard info from prmon json
[2025-10-13 01:43:23] 2025-10-12 23:42:42,852 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 01:43:23] 2025-10-12 23:42:42,852 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 01:43:23] 2025-10-12 23:42:42,853 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 01:43:23] 2025-10-12 23:42:42,853 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 01:43:23] 2025-10-12 23:42:42,853 | INFO     | fitting pss+swap vs Time
[2025-10-13 01:43:23] 2025-10-12 23:42:42,853 | INFO     | sum of square deviations: 101843770.0
[2025-10-13 01:43:23] 2025-10-12 23:42:42,854 | INFO     | sum of deviations: -13353761930.000002
[2025-10-13 01:43:23] 2025-10-12 23:42:42,854 | INFO     | mean x: 1760310307.0
[2025-10-13 01:43:23] 2025-10-12 23:42:42,854 | INFO     | mean y: 2825072.0434782607
[2025-10-13 01:43:23] 2025-10-12 23:42:42,854 | INFO     | -- intersect: 230814830191.28854
[2025-10-13 01:43:23] 2025-10-12 23:42:42,854 | INFO     | intersect: 230814830191.28854
[2025-10-13 01:43:23] 2025-10-12 23:42:42,854 | INFO     | chi2: 0.12348979727722037
[2025-10-13 01:43:23] 2025-10-12 23:42:42,854 | INFO     | -- intersect: 230814830191.28854
[2025-10-13 01:43:23] 2025-10-12 23:42:42,854 | INFO     | current memory leak: -131.12 B/s (using 69 data points, chi2=0.12)
[2025-10-13 01:43:23] 2025-10-12 23:42:42,854 | INFO     | could have reported an average CPU frequency of 3744 MHz (6 samples)
[2025-10-13 01:43:23] 2025-10-12 23:42:42,854 | INFO     | ..............................
[2025-10-13 01:43:23] 2025-10-12 23:42:42,854 | INFO     | . Timing measurements:
[2025-10-13 01:43:23] 2025-10-12 23:42:42,854 | INFO     | . get job = 0 s
[2025-10-13 01:43:23] 2025-10-12 23:42:42,854 | INFO     | . initial setup = 0 s
[2025-10-13 01:43:23] 2025-10-12 23:42:42,854 | INFO     | . payload setup = 3 s
[2025-10-13 01:43:23] 2025-10-12 23:42:42,854 | INFO     | . stage-in = 0 s
[2025-10-13 01:43:23] 2025-10-12 23:42:42,854 | INFO     | . payload execution = 4625 s
[2025-10-13 01:43:23] 2025-10-12 23:42:42,854 | INFO     | . stage-out = 0 s
[2025-10-13 01:43:23] 2025-10-12 23:42:42,854 | INFO     | . log creation = 0 s
[2025-10-13 01:43:23] 2025-10-12 23:42:42,854 | INFO     | ..............................
[2025-10-13 01:43:23] 2025-10-12 23:42:42,896 | INFO     | 
[2025-10-13 01:43:23] 2025-10-12 23:42:42,896 | INFO     | job summary report
[2025-10-13 01:43:23] 2025-10-12 23:42:42,896 | INFO     | --------------------------------------------------
[2025-10-13 01:43:23] 2025-10-12 23:42:42,896 | INFO     | PanDA job id: 6840181657
[2025-10-13 01:43:23] 2025-10-12 23:42:42,896 | INFO     | task id: 46676269
[2025-10-13 01:43:23] 2025-10-12 23:42:42,896 | INFO     | errors: (none)
[2025-10-13 01:43:23] 2025-10-12 23:42:42,896 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 01:43:23] 2025-10-12 23:42:42,896 | INFO     | pilot state: finished 
[2025-10-13 01:43:23] 2025-10-12 23:42:42,896 | INFO     | transexitcode: 0
[2025-10-13 01:43:23] 2025-10-12 23:42:42,896 | INFO     | exeerrorcode: 0
[2025-10-13 01:43:23] 2025-10-12 23:42:42,896 | INFO     | exeerrordiag: 
[2025-10-13 01:43:23] 2025-10-12 23:42:42,896 | INFO     | exitcode: 0
[2025-10-13 01:43:23] 2025-10-12 23:42:42,896 | INFO     | exitmsg: OK
[2025-10-13 01:43:23] 2025-10-12 23:42:42,896 | INFO     | cpuconsumptiontime: 34926 s
[2025-10-13 01:43:23] 2025-10-12 23:42:42,896 | INFO     | nevents: 400
[2025-10-13 01:43:23] 2025-10-12 23:42:42,896 | INFO     | neventsw: 0
[2025-10-13 01:43:23] 2025-10-12 23:42:42,896 | INFO     | pid: 2979095
[2025-10-13 01:43:23] 2025-10-12 23:42:42,897 | INFO     | pgrp: 2979095
[2025-10-13 01:43:23] 2025-10-12 23:42:42,897 | INFO     | corecount: 8
[2025-10-13 01:43:23] 2025-10-12 23:42:42,897 | INFO     | event service: False
[2025-10-13 01:43:23] 2025-10-12 23:42:42,897 | INFO     | sizes: {0: 2348857, 2: 2349119, 10: 2349147, 4632: 2375404, 4633: 2384402, 4636: 2384458, 4640: 2384780}
[2025-10-13 01:43:23] 2025-10-12 23:42:42,897 | INFO     | --------------------------------------------------
[2025-10-13 01:43:23] 2025-10-12 23:42:42,897 | INFO     | 
[2025-10-13 01:43:23] 2025-10-12 23:42:42,897 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-13 01:43:23] 2025-10-12 23:42:42,904 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 01:43:23] 2025-10-12 23:42:42,905 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 01:43:23] 2025-10-12 23:42:42,905 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 01:43:23] 2025-10-12 23:42:42,905 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 01:43:23] 2025-10-12 23:42:42,905 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 01:43:23] 2025-10-12 23:42:42,905 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 01:43:23] 2025-10-12 23:42:42,905 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 01:43:23] 2025-10-12 23:42:42,905 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 01:43:23] 2025-10-12 23:42:42,905 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 01:43:23] 2025-10-12 23:42:42,905 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 01:43:23] 2025-10-12 23:42:42,905 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 01:43:23] 2025-10-12 23:42:42,905 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 01:43:23] 2025-10-12 23:42:42,905 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 01:43:23] 2025-10-12 23:42:42,905 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 01:43:23] 2025-10-12 23:42:42,905 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 01:43:23] 2025-10-12 23:42:42,905 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 01:43:23] 2025-10-12 23:42:42,905 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 01:43:23] 2025-10-12 23:42:42,905 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 01:43:23] 2025-10-12 23:42:42,905 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 01:43:23] 2025-10-12 23:42:42,905 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 01:43:23] 2025-10-12 23:42:42,905 | INFO     | job 6840181657 has completed (purged errors)
[2025-10-13 01:43:23] 2025-10-12 23:42:42,905 | INFO     | overall cleanup function is called
[2025-10-13 01:43:23] 2025-10-12 23:42:43,211 | INFO     | PID=2971773 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 01:43:23] 2025-10-12 23:42:43,910 | INFO     | --- collectZombieJob: --- 10, [2979095]
[2025-10-13 01:43:23] 2025-10-12 23:42:43,910 | INFO     | zombie collector waiting for pid 2979095
[2025-10-13 01:43:23] 2025-10-12 23:42:43,910 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 01:43:23] 2025-10-12 23:42:43,910 | INFO     | collected zombie processes
[2025-10-13 01:43:23] 2025-10-12 23:42:43,910 | INFO     | will attempt to kill all subprocesses of pid=2979095
[2025-10-13 01:43:23] 2025-10-12 23:42:43,951 | INFO     | process IDs to be killed: [2979095] (in reverse order)
[2025-10-13 01:43:23] 2025-10-12 23:42:43,969 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 01:43:23] 2025-10-12 23:42:43,970 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 01:43:23] 2025-10-12 23:42:43,971 | INFO     | did not find any defunct processes belonging to 2979095
[2025-10-13 01:43:23] 2025-10-12 23:42:43,972 | INFO     | did not find any defunct processes belonging to 2979095
[2025-10-13 01:43:23] 2025-10-12 23:42:43,972 | INFO     | ready for new job
[2025-10-13 01:43:23] 2025-10-12 23:42:43,972 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 01:43:23] 2025-10-12 23:42:43,973 | INFO     | ***************************************
[2025-10-13 01:43:23] 2025-10-12 23:42:43,973 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 01:43:23] 2025-10-12 23:42:43,973 | INFO     | ***************************************
[2025-10-13 01:43:23] 2025-10-12 23:42:43,973 | INFO     | 
[2025-10-13 01:43:23] 2025-10-12 23:42:43,973 | INFO     | architecture information:
[2025-10-13 01:43:23] 2025-10-12 23:42:43,973 | INFO     | executing command: cat /etc/os-release
[2025-10-13 01:43:23] 2025-10-12 23:42:43,979 | INFO     | cat /etc/os-release:
[2025-10-13 01:43:23] NAME="CentOS Linux"
[2025-10-13 01:43:23] VERSION="7 (Core)"
[2025-10-13 01:43:23] ID="centos"
[2025-10-13 01:43:23] ID_LIKE="rhel fedora"
[2025-10-13 01:43:23] VERSION_ID="7"
[2025-10-13 01:43:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 01:43:23] ANSI_COLOR="0;31"
[2025-10-13 01:43:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 01:43:23] HOME_URL="https://www.centos.org/"
[2025-10-13 01:43:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 01:43:23] 
[2025-10-13 01:43:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 01:43:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 01:43:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 01:43:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 01:43:23] 
[2025-10-13 01:43:23] 2025-10-12 23:42:43,979 | INFO     | ***************************************
[2025-10-13 01:43:23] 2025-10-12 23:42:44,482 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-13 01:43:23] 2025-10-12 23:42:44,488 | INFO     | sufficient remaining disk space (97327775744 B)
[2025-10-13 01:43:23] 2025-10-12 23:42:44,488 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 01:43:23] 2025-10-12 23:42:44,489 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 01:43:23] 2025-10-12 23:42:44,489 | INFO     | update_server=False
[2025-10-13 01:43:23] 2025-10-12 23:42:44,489 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 01:43:23] 2025-10-12 23:42:44,489 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:43:23] 2025-10-12 23:42:44,533 | INFO     | all job control threads have been joined
[2025-10-13 01:43:23] 2025-10-12 23:42:44,712 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 01:43:23] 2025-10-12 23:42:44,904 | INFO     | all data control threads have been joined
[2025-10-13 01:43:23] 2025-10-12 23:42:45,240 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:43:23] 2025-10-12 23:42:45,240 | INFO     | aborting loop
[2025-10-13 01:43:23] 2025-10-12 23:42:45,494 | INFO     | [job] retrieve thread has finished
[2025-10-13 01:43:23] 2025-10-12 23:42:45,494 | INFO     | [job] queue monitor thread has finished
[2025-10-13 01:43:23] 2025-10-12 23:42:45,501 | INFO     | all payload control threads have been joined
[2025-10-13 01:43:23] 2025-10-12 23:42:45,504 | INFO     | [payload] validate_post thread has finished
[2025-10-13 01:43:23] 2025-10-12 23:42:45,538 | INFO     | [job] control thread has finished
[2025-10-13 01:43:23] 2025-10-12 23:42:45,907 | INFO     | [data] control thread has finished
[2025-10-13 01:43:23] 2025-10-12 23:42:45,947 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 01:43:23] 2025-10-12 23:42:46,001 | INFO     | [payload] failed_post thread has finished
[2025-10-13 01:43:23] 2025-10-12 23:42:46,173 | INFO     | [job] validate thread has finished
[2025-10-13 01:43:23] 2025-10-12 23:42:46,245 | INFO     | [job] job monitor thread has finished
[2025-10-13 01:43:23] 2025-10-12 23:42:46,308 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 01:43:23] 2025-10-12 23:42:46,373 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 01:43:23] 2025-10-12 23:42:46,404 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 01:43:23] 2025-10-12 23:42:46,506 | INFO     | [payload] control thread has finished
[2025-10-13 01:43:23] 2025-10-12 23:42:46,753 | INFO     | [data] copytool_in thread has finished
[2025-10-13 01:43:23] 2025-10-12 23:42:47,952 | INFO     | [data] copytool_out thread has finished
[2025-10-13 01:43:23] 2025-10-12 23:42:48,717 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 01:43:23] 2025-10-12 23:42:55,166 | INFO     | job.realtimelogging is not enabled
[2025-10-13 01:43:23] 2025-10-12 23:42:56,171 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 01:43:23] 2025-10-12 23:43:15,335 | INFO     | PID=2971773 has CPU usage=0.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 01:43:23] 2025-10-12 23:43:15,335 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 01:43:23] 2025-10-12 23:43:15,335 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 01:43:23] 2025-10-12 23:43:15,335 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 01:43:23] 2025-10-12 23:43:17,301 | INFO     | [monitor] cgroup control has ended
[2025-10-13 01:43:23] 2025-10-12 23:43:18,370 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140240852911936)>', '<ExcThread(monitor, started 140240320710400)>']
[2025-10-13 01:43:23] 2025-10-12 23:43:19,355 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 01:43:23] 2025-10-12 23:43:19,355 | INFO     | [monitor] control thread has ended
[2025-10-13 01:43:23] 2025-10-12 23:43:23,396 | INFO     | all workflow threads have been joined
[2025-10-13 01:43:23] 2025-10-12 23:43:23,396 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 01:43:23] 2025-10-12 23:43:23,396 | INFO     | traces error code: 0
[2025-10-13 01:43:23] 2025-10-12 23:43:23,396 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 01:43:23] 2025-10-12 23:43:23,458 [wrapper] ==== pilot stdout END ====
[2025-10-13 01:43:23] 2025-10-12 23:43:23,459 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 01:43:23] 2025-10-12 23:43:23,460 [wrapper] pilotpid: 2971773
[2025-10-13 01:43:23] 2025-10-12 23:43:23,461 [wrapper] Pilot exit status: 0
[2025-10-13 01:43:23] 2025-10-12 23:43:23,465 [wrapper] pandaids: 6840181657
[2025-10-13 01:43:23] 2025-10-12 23:43:23,475 [wrapper] cleanup supervisor_pilot 2995054 2971774
[2025-10-13 01:43:23] 2025-10-12 23:43:23,477 [wrapper] Test setup, not cleaning
[2025-10-13 01:43:23] 2025-10-12 23:43:23,478 [wrapper] apfmon messages muted
[2025-10-13 01:43:23] 2025-10-12 23:43:23,479 [wrapper] ==== wrapper stdout END ====
[2025-10-13 01:43:23] 2025-10-12 23:43:23,480 [wrapper] ==== wrapper stderr END ====
[2025-10-13 01:43:23]  *** Error codes and diagnostics ***
[2025-10-13 01:43:23]     "exeErrorCode": 0,
[2025-10-13 01:43:23]     "exeErrorDiag": "",
[2025-10-13 01:43:23]     "pilotErrorCode": 0,
[2025-10-13 01:43:23]     "pilotErrorDiag": "",
[2025-10-13 01:43:23]  *** Listing of results directory ***
[2025-10-13 01:43:23] total 399148
[2025-10-13 01:43:23] -rw-r--r-- 1 boinc boinc    557409 Oct 12 15:55 pilot3.tar.gz
[2025-10-13 01:43:23] -rwx------ 1 boinc boinc     36292 Oct 12 16:18 runpilot2-wrapper.sh
[2025-10-13 01:43:23] -rw-r--r-- 1 boinc boinc      5112 Oct 12 16:18 queuedata.json
[2025-10-13 01:43:23] -rw-r--r-- 1 boinc boinc       100 Oct 13 00:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 01:43:23] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 00:25 run_atlas
[2025-10-13 01:43:23] -rw-r--r-- 1 boinc boinc       105 Oct 13 00:25 job.xml
[2025-10-13 01:43:23] -rw-r--r-- 2 boinc boinc 218825766 Oct 13 00:25 EVNT.46676267._004226.pool.root.1
[2025-10-13 01:43:23] -rw-r--r-- 2 boinc boinc     15120 Oct 13 00:25 start_atlas.sh
[2025-10-13 01:43:23] drwxrwx--x 2 boinc boinc        68 Oct 13 00:25 shared
[2025-10-13 01:43:23] -rw-r--r-- 2 boinc boinc    569675 Oct 13 00:25 input.tar.gz
[2025-10-13 01:43:23] -rw-r--r-- 1 boinc boinc      6325 Oct 13 00:25 init_data.xml
[2025-10-13 01:43:23] -rw-r--r-- 1 boinc boinc         0 Oct 13 00:25 boinc_lockfile
[2025-10-13 01:43:23] -rw-r--r-- 1 boinc boinc      2550 Oct 13 00:25 pandaJob.out
[2025-10-13 01:43:23] -rw------- 1 boinc boinc    975603 Oct 13 00:25 agis_schedconf.cvmfs.json
[2025-10-13 01:43:23] -rw------- 1 boinc boinc   1560580 Oct 13 00:25 agis_ddmendpoints.agis.ALL.json
[2025-10-13 01:43:23] drwx------ 5 boinc boinc      4096 Oct 13 00:25 pilot3
[2025-10-13 01:43:23] -rw------- 1 boinc boinc 183976255 Oct 13 01:42 HITS.46676269._080532.pool.root.1
[2025-10-13 01:43:23] -rw------- 1 boinc boinc      1014 Oct 13 01:42 memory_monitor_summary.json
[2025-10-13 01:43:23] -rw------- 1 boinc boinc    334364 Oct 13 01:42 log.46676269._080532.job.log.tgz.1
[2025-10-13 01:43:23] -rw-r--r-- 1 boinc boinc       529 Oct 13 01:42 boinc_task_state.xml
[2025-10-13 01:43:23] -rw------- 1 boinc boinc      7779 Oct 13 01:42 heartbeat.json
[2025-10-13 01:43:23] -rw------- 1 boinc boinc        95 Oct 13 01:42 pilot_heartbeat.json
[2025-10-13 01:43:23] -rw-r--r-- 1 boinc boinc      8192 Oct 13 01:43 boinc_mmap_file
[2025-10-13 01:43:23] -rw-r--r-- 1 boinc boinc        27 Oct 13 01:43 wrapper_checkpoint.txt
[2025-10-13 01:43:23] -rw------- 1 boinc boinc      4820 Oct 13 01:43 pilotlog.txt
[2025-10-13 01:43:23] -rw------- 1 boinc boinc    682929 Oct 13 01:43 log.46676269._080532.job.log.1
[2025-10-13 01:43:23] -rw------- 1 boinc boinc       357 Oct 13 01:43 output.list
[2025-10-13 01:43:23] -rw-r--r-- 1 boinc boinc       620 Oct 13 01:43 runtime_log
[2025-10-13 01:43:23] -rw------- 1 boinc boinc   1034240 Oct 13 01:43 result.tar.gz
[2025-10-13 01:43:23] -rw-r--r-- 1 boinc boinc      8716 Oct 13 01:43 runtime_log.err
[2025-10-13 01:43:23] -rw------- 1 boinc boinc       648 Oct 13 01:43 7xTNDmJ5BS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmEDkNDmEK69Kn.diag
[2025-10-13 01:43:23] -rw-r--r-- 1 boinc boinc     22074 Oct 13 01:43 stderr.txt
[2025-10-13 01:43:23] HITS file was successfully produced:
[2025-10-13 01:43:23] -rw------- 1 boinc boinc 183976255 Oct 13 01:42 shared/HITS.pool.root.1
[2025-10-13 01:43:23]  *** Contents of shared directory: ***
[2025-10-13 01:43:23] total 394956
[2025-10-13 01:43:23] -rw-r--r-- 2 boinc boinc 218825766 Oct 13 00:25 ATLAS.root_0
[2025-10-13 01:43:23] -rw-r--r-- 2 boinc boinc     15120 Oct 13 00:25 start_atlas.sh
[2025-10-13 01:43:23] -rw-r--r-- 2 boinc boinc    569675 Oct 13 00:25 input.tar.gz
[2025-10-13 01:43:23] -rw------- 1 boinc boinc 183976255 Oct 13 01:42 HITS.pool.root.1
[2025-10-13 01:43:23] -rw------- 1 boinc boinc   1034240 Oct 13 01:43 result.tar.gz
01:43:24 (2968068): run_atlas exited; CPU time 34974.224279
01:43:24 (2968068): called boinc_finish(0)

</stderr_txt>
]]>

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