Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:32:26 (22702): wrapper (7.7.26015): starting
11:32:26 (22702): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 11:32:26] Arguments: --nthreads 8
[2025-10-12 11:32:26] Threads: 8
[2025-10-12 11:32:26] Checking for CVMFS
[2025-10-12 11:32:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 11:32:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 11:32:26] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 11:32:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 11:32:26] 2.11.2.0 12540 53051 122656 151625 3 188 15961356 18432000 1824 130560 0 48337977 99.975 2390138 38163 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 11:32:26] CVMFS is ok
[2025-10-12 11:32:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 11:32:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 11:32:26] Further information can be found at the LHC@home message board.
[2025-10-12 11:32:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 11:32:26] Checking for apptainer binary...
[2025-10-12 11:32:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 11:32:26] Running /usr/bin/apptainer --version
[2025-10-12 11:32:26] apptainer version 1.3.2-1.el7
[2025-10-12 11:32:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 11:32:27] c-206-17.aglt2.org
[2025-10-12 11:32:27] apptainer works
[2025-10-12 11:32:27] Set ATHENA_PROC_NUMBER=8
[2025-10-12 11:32:27] Set ATHENA_CORE_NUMBER=8
[2025-10-12 11:32:27] Starting ATLAS job with PandaID=6840181472
[2025-10-12 11:32:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 14:37:01]  *** The last 200 lines of the pilot log: ***
[2025-10-12 14:37:01] 2025-10-12 18:36:02,294 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 14:37:01] 2025-10-12 18:36:02,297 | INFO     | fitting pss+swap vs Time
[2025-10-12 14:37:01] 2025-10-12 18:36:02,297 | INFO     | sum of square deviations: 1808350185.0
[2025-10-12 14:37:01] 2025-10-12 18:36:02,298 | INFO     | sum of deviations: 19100830875.0
[2025-10-12 14:37:01] 2025-10-12 18:36:02,298 | INFO     | mean x: 1760288639.5
[2025-10-12 14:37:01] 2025-10-12 18:36:02,298 | INFO     | mean y: 2488872.9777777777
[2025-10-12 14:37:01] 2025-10-12 18:36:02,298 | INFO     | -- intersect: -18590688418.218914
[2025-10-12 14:37:01] 2025-10-12 18:36:02,298 | INFO     | intersect: -18590688418.218914
[2025-10-12 14:37:01] 2025-10-12 18:36:02,298 | INFO     | chi2: 1.390827304330626
[2025-10-12 14:37:01] 2025-10-12 18:36:02,299 | INFO     | sum of square deviations: 1661798600.0
[2025-10-12 14:37:01] 2025-10-12 18:36:02,300 | INFO     | sum of deviations: 18690628566.999992
[2025-10-12 14:37:01] 2025-10-12 18:36:02,300 | INFO     | mean x: 1760288487.0
[2025-10-12 14:37:01] 2025-10-12 18:36:02,300 | INFO     | mean y: 2488446.2685714285
[2025-10-12 14:37:01] 2025-10-12 18:36:02,300 | INFO     | -- intersect: -19795878384.27479
[2025-10-12 14:37:01] 2025-10-12 18:36:02,300 | INFO     | intersect: -19795878384.27479
[2025-10-12 14:37:01] 2025-10-12 18:36:02,300 | INFO     | chi2: 1.391758060868873
[2025-10-12 14:37:01] 2025-10-12 18:36:02,300 | INFO     | current chi2=1.391758060868873 (change=-0.06692107174980917 %)
[2025-10-12 14:37:01] 2025-10-12 18:36:02,300 | INFO     | right removable region: 174
[2025-10-12 14:37:01] 2025-10-12 18:36:02,301 | INFO     | sum of square deviations: 1661798600.0
[2025-10-12 14:37:01] 2025-10-12 18:36:02,302 | INFO     | sum of deviations: -8046506156.999999
[2025-10-12 14:37:01] 2025-10-12 18:36:02,302 | INFO     | mean x: 1760288792.0
[2025-10-12 14:37:01] 2025-10-12 18:36:02,302 | INFO     | mean y: 2516816.194285714
[2025-10-12 14:37:01] 2025-10-12 18:36:02,302 | INFO     | -- intersect: 8525917066.336565
[2025-10-12 14:37:01] 2025-10-12 18:36:02,302 | INFO     | intersect: 8525917066.336565
[2025-10-12 14:37:01] 2025-10-12 18:36:02,302 | INFO     | chi2: 0.055283369679615633
[2025-10-12 14:37:01] 2025-10-12 18:36:02,302 | INFO     | current chi2=0.055283369679615633 (change=96.02514492579492 %)
[2025-10-12 14:37:01] 2025-10-12 18:36:02,303 | INFO     | sum of square deviations: 1523386702.5
[2025-10-12 14:37:01] 2025-10-12 18:36:02,303 | INFO     | sum of deviations: -11840054066.999998
[2025-10-12 14:37:01] 2025-10-12 18:36:02,303 | INFO     | mean x: 1760288944.5
[2025-10-12 14:37:01] 2025-10-12 18:36:02,304 | INFO     | mean y: 2520937.9294117647
[2025-10-12 14:37:01] 2025-10-12 18:36:02,304 | INFO     | -- intersect: 13683824734.410698
[2025-10-12 14:37:01] 2025-10-12 18:36:02,304 | INFO     | intersect: 13683824734.410698
[2025-10-12 14:37:01] 2025-10-12 18:36:02,304 | INFO     | chi2: 0.01633433218187654
[2025-10-12 14:37:01] 2025-10-12 18:36:02,304 | INFO     | current chi2=0.01633433218187654 (change=70.4534432750046 %)
[2025-10-12 14:37:01] 2025-10-12 18:36:02,304 | INFO     | sum of square deviations: 1392881930.0
[2025-10-12 14:37:01] 2025-10-12 18:36:02,305 | INFO     | sum of deviations: -11599765123.999998
[2025-10-12 14:37:01] 2025-10-12 18:36:02,305 | INFO     | mean x: 1760289097.0
[2025-10-12 14:37:01] 2025-10-12 18:36:02,305 | INFO     | mean y: 2520651.9454545453
[2025-10-12 14:37:01] 2025-10-12 18:36:02,305 | INFO     | -- intersect: 14662011622.251923
[2025-10-12 14:37:01] 2025-10-12 18:36:02,306 | INFO     | intersect: 14662011622.251923
[2025-10-12 14:37:01] 2025-10-12 18:36:02,306 | INFO     | chi2: 0.015481820898909655
[2025-10-12 14:37:01] 2025-10-12 18:36:02,306 | INFO     | current chi2=0.015481820898909655 (change=5.219137663385923 %)
[2025-10-12 14:37:01] 2025-10-12 18:36:02,306 | INFO     | left removable region: 30
[2025-10-12 14:37:01] 2025-10-12 18:36:02,306 | INFO     | sum of square deviations: 925859220.0
[2025-10-12 14:37:01] 2025-10-12 18:36:02,307 | INFO     | sum of deviations: -7673462456.499998
[2025-10-12 14:37:01] 2025-10-12 18:36:02,307 | INFO     | mean x: 1760289371.5
[2025-10-12 14:37:01] 2025-10-12 18:36:02,307 | INFO     | mean y: 2516336.3680555555
[2025-10-12 14:37:01] 2025-10-12 18:36:02,307 | INFO     | -- intersect: 14591682932.107338
[2025-10-12 14:37:01] 2025-10-12 18:36:02,307 | INFO     | intersect: 14591682932.107338
[2025-10-12 14:37:01] 2025-10-12 18:36:02,308 | INFO     | chi2: 0.014196524363942937
[2025-10-12 14:37:01] 2025-10-12 18:36:02,308 | INFO     | -- intersect: 14591682932.107338
[2025-10-12 14:37:01] 2025-10-12 18:36:02,308 | INFO     | current memory leak: -8.29 B/s (using 144 data points, chi2=0.01)
[2025-10-12 14:37:01] 2025-10-12 18:36:02,308 | INFO     | could have reported an average CPU frequency of 2374 MHz (10 samples)
[2025-10-12 14:37:01] 2025-10-12 18:36:02,308 | INFO     | ..............................
[2025-10-12 14:37:01] 2025-10-12 18:36:02,308 | INFO     | . Timing measurements:
[2025-10-12 14:37:01] 2025-10-12 18:36:02,308 | INFO     | . get job = 0 s
[2025-10-12 14:37:01] 2025-10-12 18:36:02,309 | INFO     | . initial setup = 2 s
[2025-10-12 14:37:01] 2025-10-12 18:36:02,309 | INFO     | . payload setup = 4 s
[2025-10-12 14:37:01] 2025-10-12 18:36:02,309 | INFO     | . stage-in = 0 s
[2025-10-12 14:37:01] 2025-10-12 18:36:02,309 | INFO     | . payload execution = 10970 s
[2025-10-12 14:37:01] 2025-10-12 18:36:02,309 | INFO     | . stage-out = 1 s
[2025-10-12 14:37:01] 2025-10-12 18:36:02,309 | INFO     | . log creation = 0 s
[2025-10-12 14:37:01] 2025-10-12 18:36:02,309 | INFO     | ..............................
[2025-10-12 14:37:01] 2025-10-12 18:36:02,386 | INFO     | 
[2025-10-12 14:37:01] 2025-10-12 18:36:02,386 | INFO     | job summary report
[2025-10-12 14:37:01] 2025-10-12 18:36:02,386 | INFO     | --------------------------------------------------
[2025-10-12 14:37:01] 2025-10-12 18:36:02,386 | INFO     | PanDA job id: 6840181472
[2025-10-12 14:37:01] 2025-10-12 18:36:02,386 | INFO     | task id: 46676269
[2025-10-12 14:37:01] 2025-10-12 18:36:02,387 | INFO     | errors: (none)
[2025-10-12 14:37:01] 2025-10-12 18:36:02,387 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 14:37:01] 2025-10-12 18:36:02,387 | INFO     | pilot state: finished 
[2025-10-12 14:37:01] 2025-10-12 18:36:02,387 | INFO     | transexitcode: 0
[2025-10-12 14:37:01] 2025-10-12 18:36:02,387 | INFO     | exeerrorcode: 0
[2025-10-12 14:37:01] 2025-10-12 18:36:02,387 | INFO     | exeerrordiag: 
[2025-10-12 14:37:01] 2025-10-12 18:36:02,387 | INFO     | exitcode: 0
[2025-10-12 14:37:01] 2025-10-12 18:36:02,387 | INFO     | exitmsg: OK
[2025-10-12 14:37:01] 2025-10-12 18:36:02,387 | INFO     | cpuconsumptiontime: 82866 s
[2025-10-12 14:37:01] 2025-10-12 18:36:02,387 | INFO     | nevents: 400
[2025-10-12 14:37:01] 2025-10-12 18:36:02,388 | INFO     | neventsw: 0
[2025-10-12 14:37:01] 2025-10-12 18:36:02,388 | INFO     | pid: 348
[2025-10-12 14:37:01] 2025-10-12 18:36:02,388 | INFO     | pgrp: 348
[2025-10-12 14:37:01] 2025-10-12 18:36:02,388 | INFO     | corecount: 8
[2025-10-12 14:37:01] 2025-10-12 18:36:02,388 | INFO     | event service: False
[2025-10-12 14:37:01] 2025-10-12 18:36:02,388 | INFO     | sizes: {0: 2348857, 3: 2349119, 11: 2349147, 10978: 2378331, 10980: 2387329, 10982: 2387385, 10990: 2387795}
[2025-10-12 14:37:01] 2025-10-12 18:36:02,388 | INFO     | --------------------------------------------------
[2025-10-12 14:37:01] 2025-10-12 18:36:02,388 | INFO     | 
[2025-10-12 14:37:01] 2025-10-12 18:36:02,388 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 14:37:01] 2025-10-12 18:36:02,404 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 14:37:01] 2025-10-12 18:36:02,404 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 14:37:01] 2025-10-12 18:36:02,404 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 14:37:01] 2025-10-12 18:36:02,404 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 14:37:01] 2025-10-12 18:36:02,405 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 14:37:01] 2025-10-12 18:36:02,405 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 14:37:01] 2025-10-12 18:36:02,405 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 14:37:01] 2025-10-12 18:36:02,405 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 14:37:01] 2025-10-12 18:36:02,405 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 14:37:01] 2025-10-12 18:36:02,405 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 14:37:01] 2025-10-12 18:36:02,405 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 14:37:01] 2025-10-12 18:36:02,405 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 14:37:01] 2025-10-12 18:36:02,405 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 14:37:01] 2025-10-12 18:36:02,406 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 14:37:01] 2025-10-12 18:36:02,406 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 14:37:01] 2025-10-12 18:36:02,406 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 14:37:01] 2025-10-12 18:36:02,406 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 14:37:01] 2025-10-12 18:36:02,406 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 14:37:01] 2025-10-12 18:36:02,406 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 14:37:01] 2025-10-12 18:36:02,406 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 14:37:01] 2025-10-12 18:36:02,406 | INFO     | job 6840181472 has completed (purged errors)
[2025-10-12 14:37:01] 2025-10-12 18:36:02,406 | INFO     | overall cleanup function is called
[2025-10-12 14:37:01] 2025-10-12 18:36:03,413 | INFO     | --- collectZombieJob: --- 10, [348]
[2025-10-12 14:37:01] 2025-10-12 18:36:03,414 | INFO     | zombie collector waiting for pid 348
[2025-10-12 14:37:01] 2025-10-12 18:36:03,414 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 14:37:01] 2025-10-12 18:36:03,414 | INFO     | collected zombie processes
[2025-10-12 14:37:01] 2025-10-12 18:36:03,414 | INFO     | will attempt to kill all subprocesses of pid=348
[2025-10-12 14:37:01] 2025-10-12 18:36:03,520 | INFO     | process IDs to be killed: [348] (in reverse order)
[2025-10-12 14:37:01] 2025-10-12 18:36:03,558 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 14:37:01] 2025-10-12 18:36:03,558 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 14:37:01] 2025-10-12 18:36:03,561 | INFO     | did not find any defunct processes belonging to 348
[2025-10-12 14:37:01] 2025-10-12 18:36:03,564 | INFO     | did not find any defunct processes belonging to 348
[2025-10-12 14:37:01] 2025-10-12 18:36:03,564 | INFO     | ready for new job
[2025-10-12 14:37:01] 2025-10-12 18:36:03,564 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 14:37:01] 2025-10-12 18:36:03,565 | INFO     | ***************************************
[2025-10-12 14:37:01] 2025-10-12 18:36:03,566 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 14:37:01] 2025-10-12 18:36:03,566 | INFO     | ***************************************
[2025-10-12 14:37:01] 2025-10-12 18:36:03,566 | INFO     | 
[2025-10-12 14:37:01] 2025-10-12 18:36:03,567 | INFO     | architecture information:
[2025-10-12 14:37:01] 2025-10-12 18:36:03,567 | INFO     | executing command: cat /etc/os-release
[2025-10-12 14:37:01] 2025-10-12 18:36:03,578 | INFO     | cat /etc/os-release:
[2025-10-12 14:37:01] NAME="CentOS Linux"
[2025-10-12 14:37:01] VERSION="7 (Core)"
[2025-10-12 14:37:01] ID="centos"
[2025-10-12 14:37:01] ID_LIKE="rhel fedora"
[2025-10-12 14:37:01] VERSION_ID="7"
[2025-10-12 14:37:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 14:37:01] ANSI_COLOR="0;31"
[2025-10-12 14:37:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 14:37:01] HOME_URL="https://www.centos.org/"
[2025-10-12 14:37:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 14:37:01] 
[2025-10-12 14:37:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 14:37:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 14:37:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 14:37:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 14:37:01] 
[2025-10-12 14:37:01] 2025-10-12 18:36:03,578 | INFO     | ***************************************
[2025-10-12 14:37:01] 2025-10-12 18:36:04,081 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 14:37:01] 2025-10-12 18:36:04,091 | INFO     | sufficient remaining disk space (28106031104 B)
[2025-10-12 14:37:01] 2025-10-12 18:36:04,092 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 14:37:01] 2025-10-12 18:36:04,092 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 14:37:01] 2025-10-12 18:36:04,092 | INFO     | update_server=False
[2025-10-12 14:37:01] 2025-10-12 18:36:04,092 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 14:37:01] 2025-10-12 18:36:04,092 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:37:01] 2025-10-12 18:36:04,326 | INFO     | all payload control threads have been joined
[2025-10-12 14:37:01] 2025-10-12 18:36:04,409 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 14:37:01] 2025-10-12 18:36:04,409 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 14:37:01] 2025-10-12 18:36:04,409 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:37:01] 2025-10-12 18:36:04,409 | INFO     | will abort loop
[2025-10-12 14:37:01] 2025-10-12 18:36:04,701 | INFO     | all job control threads have been joined
[2025-10-12 14:37:01] 2025-10-12 18:36:04,887 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 14:37:01] 2025-10-12 18:36:05,013 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 14:37:01] 2025-10-12 18:36:05,073 | INFO     | all data control threads have been joined
[2025-10-12 14:37:01] 2025-10-12 18:36:05,097 | INFO     | [job] retrieve thread has finished
[2025-10-12 14:37:01] 2025-10-12 18:36:05,098 | INFO     | [job] queue monitor thread has finished
[2025-10-12 14:37:01] 2025-10-12 18:36:05,209 | INFO     | [data] copytool_in thread has finished
[2025-10-12 14:37:01] 2025-10-12 18:36:05,332 | INFO     | [payload] control thread has finished
[2025-10-12 14:37:01] 2025-10-12 18:36:05,360 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 14:37:01] 2025-10-12 18:36:05,415 | INFO     | [job] job monitor thread has finished
[2025-10-12 14:37:01] 2025-10-12 18:36:05,457 | INFO     | [payload] failed_post thread has finished
[2025-10-12 14:37:01] 2025-10-12 18:36:05,544 | INFO     | [payload] validate_post thread has finished
[2025-10-12 14:37:01] 2025-10-12 18:36:05,550 | INFO     | [job] validate thread has finished
[2025-10-12 14:37:01] 2025-10-12 18:36:05,705 | INFO     | [job] control thread has finished
[2025-10-12 14:37:01] 2025-10-12 18:36:06,056 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 14:37:01] 2025-10-12 18:36:06,078 | INFO     | [data] control thread has finished
[2025-10-12 14:37:01] 2025-10-12 18:36:06,345 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 14:37:01] 2025-10-12 18:36:06,378 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 14:37:01] 2025-10-12 18:36:07,019 | INFO     | [data] copytool_out thread has finished
[2025-10-12 14:37:01] 2025-10-12 18:36:08,890 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 14:37:01] 2025-10-12 18:36:33,897 | INFO     | PID=26413 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 14:37:01] 2025-10-12 18:36:33,897 | INFO     | .. there are 3 such processes running
[2025-10-12 14:37:01] 2025-10-12 18:36:33,898 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 14:37:01] 2025-10-12 18:36:33,898 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 14:37:01] 2025-10-12 18:36:33,899 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 14:37:01] 2025-10-12 18:36:55,011 | INFO     | [monitor] cgroup control has ended
[2025-10-12 14:37:01] 2025-10-12 18:36:56,045 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140493057578816)>', '<ExcThread(monitor, started 140492759078656)>']
[2025-10-12 14:37:01] 2025-10-12 18:36:57,005 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 14:37:01] 2025-10-12 18:36:57,006 | INFO     | [monitor] control thread has ended
[2025-10-12 14:37:01] 2025-10-12 18:37:01,070 | INFO     | all workflow threads have been joined
[2025-10-12 14:37:01] 2025-10-12 18:37:01,071 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 14:37:01] 2025-10-12 18:37:01,071 | INFO     | traces error code: 0
[2025-10-12 14:37:01] 2025-10-12 18:37:01,071 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 14:37:01] 2025-10-12 18:37:01,304 [wrapper] ==== pilot stdout END ====
[2025-10-12 14:37:01] 2025-10-12 18:37:01,306 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 14:37:01] 2025-10-12 18:37:01,309 [wrapper] pilotpid: 26413
[2025-10-12 14:37:01] 2025-10-12 18:37:01,312 [wrapper] Pilot exit status: 0
[2025-10-12 14:37:01] 2025-10-12 18:37:01,324 [wrapper] pandaids: 6840181472
[2025-10-12 14:37:01] 2025-10-12 18:37:01,367 [wrapper] cleanup supervisor_pilot 31934 26414
[2025-10-12 14:37:01] 2025-10-12 18:37:01,369 [wrapper] Test setup, not cleaning
[2025-10-12 14:37:01] 2025-10-12 18:37:01,372 [wrapper] apfmon messages muted
[2025-10-12 14:37:01] 2025-10-12 18:37:01,375 [wrapper] ==== wrapper stdout END ====
[2025-10-12 14:37:01] 2025-10-12 18:37:01,377 [wrapper] ==== wrapper stderr END ====
[2025-10-12 14:37:01]  *** Error codes and diagnostics ***
[2025-10-12 14:37:01]     "exeErrorCode": 0,
[2025-10-12 14:37:01]     "exeErrorDiag": "",
[2025-10-12 14:37:01]     "pilotErrorCode": 0,
[2025-10-12 14:37:01]     "pilotErrorDiag": "",
[2025-10-12 14:37:01]  *** Listing of results directory ***
[2025-10-12 14:37:01] total 408292
[2025-10-12 14:37:01] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 09:55 pilot3.tar.gz
[2025-10-12 14:37:01] -rwx------ 1 boincer umatlas     36292 Oct 12 10:16 runpilot2-wrapper.sh
[2025-10-12 14:37:01] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 10:16 queuedata.json
[2025-10-12 14:37:01] -rw-r--r-- 1 boincer umatlas       100 Oct 12 11:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 14:37:01] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 11:32 run_atlas
[2025-10-12 14:37:01] -rw-r--r-- 1 boincer umatlas       105 Oct 12 11:32 job.xml
[2025-10-12 14:37:01] -rw-r--r-- 2 boincer umatlas 219616673 Oct 12 11:32 EVNT.46676267._004219.pool.root.1
[2025-10-12 14:37:01] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 11:32 start_atlas.sh
[2025-10-12 14:37:01] drwxrwx--x 2 boincer umatlas      4096 Oct 12 11:32 shared
[2025-10-12 14:37:01] -rw-r--r-- 2 boincer umatlas    569680 Oct 12 11:32 input.tar.gz
[2025-10-12 14:37:01] -rw-r--r-- 1 boincer umatlas         0 Oct 12 11:32 boinc_lockfile
[2025-10-12 14:37:01] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 11:32 pandaJob.out
[2025-10-12 14:37:01] -rw------- 1 boincer umatlas    975528 Oct 12 11:32 agis_schedconf.cvmfs.json
[2025-10-12 14:37:01] drwx------ 5 boincer umatlas      4096 Oct 12 11:32 pilot3
[2025-10-12 14:37:01] -rw-r--r-- 1 boincer umatlas      5952 Oct 12 14:27 init_data.xml
[2025-10-12 14:37:01] -rw------- 1 boincer umatlas 190616235 Oct 12 14:35 HITS.46676269._080431.pool.root.1
[2025-10-12 14:37:01] -rw-r--r-- 1 boincer umatlas       530 Oct 12 14:35 boinc_task_state.xml
[2025-10-12 14:37:01] -rw------- 1 boincer umatlas      1067 Oct 12 14:35 memory_monitor_summary.json
[2025-10-12 14:37:01] -rw------- 1 boincer umatlas   1560580 Oct 12 14:35 agis_ddmendpoints.agis.ALL.json
[2025-10-12 14:37:01] -rw------- 1 boincer umatlas    428189 Oct 12 14:35 log.46676269._080431.job.log.tgz.1
[2025-10-12 14:37:01] -rw------- 1 boincer umatlas      7860 Oct 12 14:36 heartbeat.json
[2025-10-12 14:37:01] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 14:36 boinc_mmap_file
[2025-10-12 14:37:01] -rw-r--r-- 1 boincer umatlas        28 Oct 12 14:36 wrapper_checkpoint.txt
[2025-10-12 14:37:01] -rw------- 1 boincer umatlas        95 Oct 12 14:36 pilot_heartbeat.json
[2025-10-12 14:37:01] -rw------- 1 boincer umatlas      5007 Oct 12 14:37 pilotlog.txt
[2025-10-12 14:37:01] -rw------- 1 boincer umatlas   1547431 Oct 12 14:37 log.46676269._080431.job.log.1
[2025-10-12 14:37:01] -rw------- 1 boincer umatlas       357 Oct 12 14:37 output.list
[2025-10-12 14:37:01] -rw-r--r-- 1 boincer umatlas       620 Oct 12 14:37 runtime_log
[2025-10-12 14:37:01] -rw------- 1 boincer umatlas   1996800 Oct 12 14:37 result.tar.gz
[2025-10-12 14:37:01] -rw-r--r-- 1 boincer umatlas      8704 Oct 12 14:37 runtime_log.err
[2025-10-12 14:37:01] -rw------- 1 boincer umatlas       661 Oct 12 14:37 9m6KDmM3BS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmT3TMDmQJaxZn.diag
[2025-10-12 14:37:01] -rw-r--r-- 1 boincer umatlas     20898 Oct 12 14:37 stderr.txt
[2025-10-12 14:37:01] HITS file was successfully produced:
[2025-10-12 14:37:01] -rw------- 1 boincer umatlas 190616235 Oct 12 14:35 shared/HITS.pool.root.1
[2025-10-12 14:37:01]  *** Contents of shared directory: ***
[2025-10-12 14:37:01] total 403156
[2025-10-12 14:37:01] -rw-r--r-- 2 boincer umatlas 219616673 Oct 12 11:32 ATLAS.root_0
[2025-10-12 14:37:01] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 11:32 start_atlas.sh
[2025-10-12 14:37:01] -rw-r--r-- 2 boincer umatlas    569680 Oct 12 11:32 input.tar.gz
[2025-10-12 14:37:01] -rw------- 1 boincer umatlas 190616235 Oct 12 14:35 HITS.pool.root.1
[2025-10-12 14:37:01] -rw------- 1 boincer umatlas   1996800 Oct 12 14:37 result.tar.gz
14:37:03 (22702): run_atlas exited; CPU time 82992.580121
14:37:03 (22702): called boinc_finish(0)

</stderr_txt>
]]>

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