Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:33:10 (6132): wrapper (7.7.26015): starting
11:33:10 (6132): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 11:33:10] Arguments: --nthreads 12
[2025-10-12 11:33:10] Threads: 12
[2025-10-12 11:33:10] Checking for CVMFS
[2025-10-12 11:33:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 11:33:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 11:33:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 11:33:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 11:33:10] 2.11.2.0 3103 13042 87968 151625 1 56 10827056 20275200 1 130560 0 13531030 99.993 436859 46067 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 11:33:10] CVMFS is ok
[2025-10-12 11:33:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 11:33:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 11:33:10] Further information can be found at the LHC@home message board.
[2025-10-12 11:33:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 11:33:10] Checking for apptainer binary...
[2025-10-12 11:33:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 11:33:10] Running /usr/bin/apptainer --version
[2025-10-12 11:33:10] apptainer version 1.3.2-1.el7
[2025-10-12 11:33:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 11:33:12] c-115-41.aglt2.org
[2025-10-12 11:33:12] apptainer works
[2025-10-12 11:33:12] Set ATHENA_PROC_NUMBER=12
[2025-10-12 11:33:12] Set ATHENA_CORE_NUMBER=12
[2025-10-12 11:33:12] Starting ATLAS job with PandaID=6839590610
[2025-10-12 11:33:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 12:40:38]  *** The last 200 lines of the pilot log: ***
[2025-10-12 12:40:38]  replicas=None
[2025-10-12 12:40:38]  scope=mc23_13p6TeV
[2025-10-12 12:40:38]  status=None
[2025-10-12 12:40:38]  status_code=0
[2025-10-12 12:40:38]  storage_token=
[2025-10-12 12:40:38]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6839590610/log.46676269._072179.job.log.tgz.1
[2025-10-12 12:40:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cb/31/log.46676269._072179.job.log.tgz.1
[2025-10-12 12:40:38]  workdir=None
[2025-10-12 12:40:38] ]
[2025-10-12 12:40:38] 2025-10-12 16:39:56,784 | INFO     | transferring file log.46676269._072179.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6839590610/log.46676269._072179.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 12:40:38] 2025-10-12 16:39:56,784 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6839590610/log.46676269._072179.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._072179.job
[2025-10-12 12:40:38] 2025-10-12 16:39:56,808 | INFO     | adding to output.list: log.46676269._072179.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cb/31/log.46676269._072179.job.log.tg
[2025-10-12 12:40:38] 2025-10-12 16:39:56,808 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 12:40:38] 2025-10-12 16:39:56,809 | INFO     | summary of transferred files:
[2025-10-12 12:40:38] 2025-10-12 16:39:56,809 | INFO     |  -- lfn=log.46676269._072179.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 12:40:38] 2025-10-12 16:39:56,809 | INFO     | stage-out finished correctly
[2025-10-12 12:40:38] 2025-10-12 16:39:56,875 | INFO     | time since job start (3990s) is within the limit (172800.0s)
[2025-10-12 12:40:38] 2025-10-12 16:39:57,948 | INFO     | monitor loop #300: job 0:6839590610 is in state 'finished'
[2025-10-12 12:40:38] 2025-10-12 16:39:57,948 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 12:40:38] 2025-10-12 16:39:58,886 | INFO     | time since job start (3992s) is within the limit (172800.0s)
[2025-10-12 12:40:38] 2025-10-12 16:39:59,803 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 12:40:38] 2025-10-12 16:39:59,877 | INFO     | job 6839590610 has state=finished
[2025-10-12 12:40:38] 2025-10-12 16:39:59,877 | INFO     | preparing for final server update for job 6839590610 in state='finished'
[2025-10-12 12:40:38] 2025-10-12 16:39:59,878 | INFO     | this job has now completed (state=finished)
[2025-10-12 12:40:38] 2025-10-12 16:39:59,878 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 12:40:38] 2025-10-12 16:39:59,878 | INFO     | log transfer has been attempted: DONE
[2025-10-12 12:40:38] 2025-10-12 16:39:59,879 | INFO     | job 6839590610 has finished - writing final server update
[2025-10-12 12:40:38] 2025-10-12 16:39:59,879 | INFO     | total number of processed events: 400 (read)
[2025-10-12 12:40:38] 2025-10-12 16:39:59,880 | INFO     | executing command: lscpu
[2025-10-12 12:40:38] 2025-10-12 16:39:59,904 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 12:40:38] 2025-10-12 16:40:00,457 | INFO     | monitor loop #301: job 0:6839590610 is in state 'finished'
[2025-10-12 12:40:38] 2025-10-12 16:40:00,458 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 12:40:38] 2025-10-12 16:40:00,890 | INFO     | time since job start (3994s) is within the limit (172800.0s)
[2025-10-12 12:40:38] 2025-10-12 16:40:02,891 | INFO     | time since job start (3996s) is within the limit (172800.0s)
[2025-10-12 12:40:38] 2025-10-12 16:40:02,960 | INFO     | monitor loop #302: job 0:6839590610 is in state 'finished'
[2025-10-12 12:40:38] 2025-10-12 16:40:02,960 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 12:40:38] 2025-10-12 16:40:04,487 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 12:40:38] 2025-10-12 16:40:04,490 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1729.0833333333333
[2025-10-12 12:40:38] 2025-10-12 16:40:04,492 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839590610/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 12:40:38] 2025-10-12 16:40:04,492 | INFO     | extracted standard info from prmon json
[2025-10-12 12:40:38] 2025-10-12 16:40:04,492 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 12:40:38] 2025-10-12 16:40:04,492 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 12:40:38] 2025-10-12 16:40:04,493 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 12:40:38] 2025-10-12 16:40:04,493 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 12:40:38] 2025-10-12 16:40:04,494 | INFO     | fitting pss+swap vs Time
[2025-10-12 12:40:38] 2025-10-12 16:40:04,494 | INFO     | sum of square deviations: 60482994.5
[2025-10-12 12:40:38] 2025-10-12 16:40:04,494 | INFO     | sum of deviations: -922692466.0
[2025-10-12 12:40:38] 2025-10-12 16:40:04,494 | INFO     | mean x: 1760285278.5
[2025-10-12 12:40:38] 2025-10-12 16:40:04,495 | INFO     | mean y: 2953586.5862068967
[2025-10-12 12:40:38] 2025-10-12 16:40:04,495 | INFO     | -- intersect: 26856815203.55132
[2025-10-12 12:40:38] 2025-10-12 16:40:04,495 | INFO     | intersect: 26856815203.55132
[2025-10-12 12:40:38] 2025-10-12 16:40:04,495 | INFO     | chi2: 0.08421591273804077
[2025-10-12 12:40:38] 2025-10-12 16:40:04,495 | INFO     | -- intersect: 26856815203.55132
[2025-10-12 12:40:38] 2025-10-12 16:40:04,495 | INFO     | current memory leak: -15.26 B/s (using 58 data points, chi2=0.08)
[2025-10-12 12:40:38] 2025-10-12 16:40:04,495 | INFO     | could have reported an average CPU frequency of 2150 MHz (6 samples)
[2025-10-12 12:40:38] 2025-10-12 16:40:04,496 | INFO     | ..............................
[2025-10-12 12:40:38] 2025-10-12 16:40:04,496 | INFO     | . Timing measurements:
[2025-10-12 12:40:38] 2025-10-12 16:40:04,496 | INFO     | . get job = 0 s
[2025-10-12 12:40:38] 2025-10-12 16:40:04,496 | INFO     | . initial setup = 2 s
[2025-10-12 12:40:38] 2025-10-12 16:40:04,496 | INFO     | . payload setup = 6 s
[2025-10-12 12:40:38] 2025-10-12 16:40:04,496 | INFO     | . stage-in = 0 s
[2025-10-12 12:40:38] 2025-10-12 16:40:04,496 | INFO     | . payload execution = 3963 s
[2025-10-12 12:40:38] 2025-10-12 16:40:04,496 | INFO     | . stage-out = 0 s
[2025-10-12 12:40:38] 2025-10-12 16:40:04,496 | INFO     | . log creation = 0 s
[2025-10-12 12:40:38] 2025-10-12 16:40:04,497 | INFO     | ..............................
[2025-10-12 12:40:38] 2025-10-12 16:40:04,572 | INFO     | 
[2025-10-12 12:40:38] 2025-10-12 16:40:04,573 | INFO     | job summary report
[2025-10-12 12:40:38] 2025-10-12 16:40:04,573 | INFO     | --------------------------------------------------
[2025-10-12 12:40:38] 2025-10-12 16:40:04,573 | INFO     | PanDA job id: 6839590610
[2025-10-12 12:40:38] 2025-10-12 16:40:04,573 | INFO     | task id: 46676269
[2025-10-12 12:40:38] 2025-10-12 16:40:04,573 | INFO     | errors: (none)
[2025-10-12 12:40:38] 2025-10-12 16:40:04,573 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 12:40:38] 2025-10-12 16:40:04,574 | INFO     | pilot state: finished 
[2025-10-12 12:40:38] 2025-10-12 16:40:04,574 | INFO     | transexitcode: 0
[2025-10-12 12:40:38] 2025-10-12 16:40:04,574 | INFO     | exeerrorcode: 0
[2025-10-12 12:40:38] 2025-10-12 16:40:04,574 | INFO     | exeerrordiag: 
[2025-10-12 12:40:38] 2025-10-12 16:40:04,574 | INFO     | exitcode: 0
[2025-10-12 12:40:38] 2025-10-12 16:40:04,574 | INFO     | exitmsg: OK
[2025-10-12 12:40:38] 2025-10-12 16:40:04,575 | INFO     | cpuconsumptiontime: 42034 s
[2025-10-12 12:40:38] 2025-10-12 16:40:04,575 | INFO     | nevents: 400
[2025-10-12 12:40:38] 2025-10-12 16:40:04,575 | INFO     | neventsw: 0
[2025-10-12 12:40:38] 2025-10-12 16:40:04,575 | INFO     | pid: 16252
[2025-10-12 12:40:38] 2025-10-12 16:40:04,575 | INFO     | pgrp: 16252
[2025-10-12 12:40:38] 2025-10-12 16:40:04,575 | INFO     | corecount: 12
[2025-10-12 12:40:38] 2025-10-12 16:40:04,576 | INFO     | event service: False
[2025-10-12 12:40:38] 2025-10-12 16:40:04,576 | INFO     | sizes: {0: 2348686, 1: 2348885, 5: 2349147, 11: 2349203, 3973: 2375016, 3974: 2384014, 3977: 2384198, 3982: 2384392}
[2025-10-12 12:40:38] 2025-10-12 16:40:04,576 | INFO     | --------------------------------------------------
[2025-10-12 12:40:38] 2025-10-12 16:40:04,576 | INFO     | 
[2025-10-12 12:40:38] 2025-10-12 16:40:04,576 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 12:40:38] 2025-10-12 16:40:04,601 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 12:40:38] 2025-10-12 16:40:04,601 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 12:40:38] 2025-10-12 16:40:04,601 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 12:40:38] 2025-10-12 16:40:04,602 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 12:40:38] 2025-10-12 16:40:04,602 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 12:40:38] 2025-10-12 16:40:04,602 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 12:40:38] 2025-10-12 16:40:04,602 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 12:40:38] 2025-10-12 16:40:04,602 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 12:40:38] 2025-10-12 16:40:04,602 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 12:40:38] 2025-10-12 16:40:04,603 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 12:40:38] 2025-10-12 16:40:04,603 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 12:40:38] 2025-10-12 16:40:04,603 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 12:40:38] 2025-10-12 16:40:04,603 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 12:40:38] 2025-10-12 16:40:04,603 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 12:40:38] 2025-10-12 16:40:04,603 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 12:40:38] 2025-10-12 16:40:04,604 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 12:40:38] 2025-10-12 16:40:04,604 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 12:40:38] 2025-10-12 16:40:04,604 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 12:40:38] 2025-10-12 16:40:04,604 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 12:40:38] 2025-10-12 16:40:04,604 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 12:40:38] 2025-10-12 16:40:04,604 | INFO     | job 6839590610 has completed (purged errors)
[2025-10-12 12:40:38] 2025-10-12 16:40:04,605 | INFO     | overall cleanup function is called
[2025-10-12 12:40:38] 2025-10-12 16:40:05,613 | INFO     | --- collectZombieJob: --- 10, [16252]
[2025-10-12 12:40:38] 2025-10-12 16:40:05,613 | INFO     | zombie collector waiting for pid 16252
[2025-10-12 12:40:38] 2025-10-12 16:40:05,613 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 12:40:38] 2025-10-12 16:40:05,613 | INFO     | collected zombie processes
[2025-10-12 12:40:38] 2025-10-12 16:40:05,614 | INFO     | will attempt to kill all subprocesses of pid=16252
[2025-10-12 12:40:38] 2025-10-12 16:40:05,700 | INFO     | process IDs to be killed: [16252] (in reverse order)
[2025-10-12 12:40:38] 2025-10-12 16:40:05,747 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 12:40:38] 2025-10-12 16:40:05,748 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 12:40:38] 2025-10-12 16:40:05,750 | INFO     | did not find any defunct processes belonging to 16252
[2025-10-12 12:40:38] 2025-10-12 16:40:05,752 | INFO     | did not find any defunct processes belonging to 16252
[2025-10-12 12:40:38] 2025-10-12 16:40:05,752 | INFO     | ready for new job
[2025-10-12 12:40:38] 2025-10-12 16:40:05,752 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 12:40:38] 2025-10-12 16:40:05,753 | INFO     | ***************************************
[2025-10-12 12:40:38] 2025-10-12 16:40:05,753 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 12:40:38] 2025-10-12 16:40:05,754 | INFO     | ***************************************
[2025-10-12 12:40:38] 2025-10-12 16:40:05,754 | INFO     | 
[2025-10-12 12:40:38] 2025-10-12 16:40:05,754 | INFO     | architecture information:
[2025-10-12 12:40:38] 2025-10-12 16:40:05,755 | INFO     | executing command: cat /etc/os-release
[2025-10-12 12:40:38] 2025-10-12 16:40:05,778 | INFO     | cat /etc/os-release:
[2025-10-12 12:40:38] NAME="CentOS Linux"
[2025-10-12 12:40:38] VERSION="7 (Core)"
[2025-10-12 12:40:38] ID="centos"
[2025-10-12 12:40:38] ID_LIKE="rhel fedora"
[2025-10-12 12:40:38] VERSION_ID="7"
[2025-10-12 12:40:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 12:40:38] ANSI_COLOR="0;31"
[2025-10-12 12:40:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 12:40:38] HOME_URL="https://www.centos.org/"
[2025-10-12 12:40:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 12:40:38] 
[2025-10-12 12:40:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 12:40:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 12:40:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 12:40:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 12:40:38] 
[2025-10-12 12:40:38] 2025-10-12 16:40:05,778 | INFO     | ***************************************
[2025-10-12 12:40:38] 2025-10-12 16:40:06,281 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 12:40:38] 2025-10-12 16:40:06,299 | INFO     | sufficient remaining disk space (18582863872 B)
[2025-10-12 12:40:38] 2025-10-12 16:40:06,300 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 12:40:38] 2025-10-12 16:40:06,300 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 12:40:38] 2025-10-12 16:40:06,300 | INFO     | update_server=False
[2025-10-12 12:40:38] 2025-10-12 16:40:06,300 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 12:40:38] 2025-10-12 16:40:06,301 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 12:40:38] 2025-10-12 16:40:06,301 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:40:38] 2025-10-12 16:40:06,314 | INFO     | all data control threads have been joined
[2025-10-12 12:40:38] 2025-10-12 16:40:06,478 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:40:38] 2025-10-12 16:40:06,479 | INFO     | aborting loop
[2025-10-12 12:40:38] 2025-10-12 16:40:06,543 | INFO     | all payload control threads have been joined
[2025-10-12 12:40:38] 2025-10-12 16:40:07,306 | INFO     | [job] retrieve thread has finished
[2025-10-12 12:40:38] 2025-10-12 16:40:07,307 | INFO     | [job] queue monitor thread has finished
[2025-10-12 12:40:38] 2025-10-12 16:40:07,307 | INFO     | [payload] failed_post thread has finished
[2025-10-12 12:40:38] 2025-10-12 16:40:07,319 | INFO     | [data] control thread has finished
[2025-10-12 12:40:38] 2025-10-12 16:40:07,388 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 12:40:38] 2025-10-12 16:40:07,403 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 12:40:38] 2025-10-12 16:40:07,484 | INFO     | [job] job monitor thread has finished
[2025-10-12 12:40:38] 2025-10-12 16:40:07,549 | INFO     | [payload] control thread has finished
[2025-10-12 12:40:38] 2025-10-12 16:40:07,738 | INFO     | all job control threads have been joined
[2025-10-12 12:40:38] 2025-10-12 16:40:08,151 | INFO     | [job] validate thread has finished
[2025-10-12 12:40:38] 2025-10-12 16:40:08,306 | INFO     | [payload] validate_post thread has finished
[2025-10-12 12:40:38] 2025-10-12 16:40:08,335 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 12:40:38] 2025-10-12 16:40:08,582 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 12:40:38] 2025-10-12 16:40:08,679 | INFO     | [data] copytool_in thread has finished
[2025-10-12 12:40:38] 2025-10-12 16:40:08,744 | INFO     | [job] control thread has finished
[2025-10-12 12:40:38] 2025-10-12 16:40:09,409 | INFO     | [data] copytool_out thread has finished
[2025-10-12 12:40:38] 2025-10-12 16:40:10,304 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 12:40:38] 2025-10-12 16:40:17,231 | INFO     | job.realtimelogging is not enabled
[2025-10-12 12:40:38] 2025-10-12 16:40:18,236 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 12:40:38] 2025-10-12 16:40:32,361 | INFO     | [monitor] cgroup control has ended
[2025-10-12 12:40:38] 2025-10-12 16:40:33,015 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140323943909184)>', '<ExcThread(monitor, started 140323644741376)>']
[2025-10-12 12:40:38] 2025-10-12 16:40:36,090 | INFO     | PID=9846 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 12:40:38] 2025-10-12 16:40:36,091 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 12:40:38] 2025-10-12 16:40:36,091 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 12:40:38] 2025-10-12 16:40:36,091 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 12:40:38] 2025-10-12 16:40:36,091 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 12:40:38] 2025-10-12 16:40:36,091 | INFO     | [monitor] control thread has ended
[2025-10-12 12:40:38] 2025-10-12 16:40:38,023 | INFO     | all workflow threads have been joined
[2025-10-12 12:40:38] 2025-10-12 16:40:38,023 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 12:40:38] 2025-10-12 16:40:38,030 | INFO     | traces error code: 0
[2025-10-12 12:40:38] 2025-10-12 16:40:38,030 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 12:40:38] 2025-10-12 16:40:38,112 [wrapper] ==== pilot stdout END ====
[2025-10-12 12:40:38] 2025-10-12 16:40:38,116 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 12:40:38] 2025-10-12 16:40:38,120 [wrapper] pilotpid: 9846
[2025-10-12 12:40:38] 2025-10-12 16:40:38,123 [wrapper] Pilot exit status: 0
[2025-10-12 12:40:38] 2025-10-12 16:40:38,139 [wrapper] pandaids: 6839590610
[2025-10-12 12:40:38] 2025-10-12 16:40:38,178 [wrapper] cleanup supervisor_pilot 14141 9847
[2025-10-12 12:40:38] 2025-10-12 16:40:38,182 [wrapper] Test setup, not cleaning
[2025-10-12 12:40:38] 2025-10-12 16:40:38,185 [wrapper] apfmon messages muted
[2025-10-12 12:40:38] 2025-10-12 16:40:38,189 [wrapper] ==== wrapper stdout END ====
[2025-10-12 12:40:38] 2025-10-12 16:40:38,192 [wrapper] ==== wrapper stderr END ====
[2025-10-12 12:40:38]  *** Error codes and diagnostics ***
[2025-10-12 12:40:38]     "exeErrorCode": 0,
[2025-10-12 12:40:38]     "exeErrorDiag": "",
[2025-10-12 12:40:38]     "pilotErrorCode": 0,
[2025-10-12 12:40:38]     "pilotErrorDiag": "",
[2025-10-12 12:40:38]  *** Listing of results directory ***
[2025-10-12 12:40:38] total 414260
[2025-10-12 12:40:38] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 01:26 pilot3.tar.gz
[2025-10-12 12:40:38] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 02:10 queuedata.json
[2025-10-12 12:40:38] -rwx------ 1 boincer umatlas     36292 Oct 12 02:11 runpilot2-wrapper.sh
[2025-10-12 12:40:38] -rw-r--r-- 1 boincer umatlas       100 Oct 12 11:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 12:40:38] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 11:33 run_atlas
[2025-10-12 12:40:38] -rw-r--r-- 1 boincer umatlas       105 Oct 12 11:33 job.xml
[2025-10-12 12:40:38] -rw-r--r-- 2 boincer umatlas 221984788 Oct 12 11:33 EVNT.46676267._004330.pool.root.1
[2025-10-12 12:40:38] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 11:33 start_atlas.sh
[2025-10-12 12:40:38] drwxrwx--x 2 boincer umatlas      4096 Oct 12 11:33 shared
[2025-10-12 12:40:38] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 11:33 input.tar.gz
[2025-10-12 12:40:38] -rw-r--r-- 1 boincer umatlas         0 Oct 12 11:33 boinc_lockfile
[2025-10-12 12:40:38] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 11:33 pandaJob.out
[2025-10-12 12:40:38] -rw------- 1 boincer umatlas    975528 Oct 12 11:33 agis_schedconf.cvmfs.json
[2025-10-12 12:40:38] -rw------- 1 boincer umatlas   1560580 Oct 12 11:33 agis_ddmendpoints.agis.ALL.json
[2025-10-12 12:40:38] drwx------ 5 boincer umatlas      4096 Oct 12 11:33 pilot3
[2025-10-12 12:40:38] -rw-r--r-- 1 boincer umatlas      5954 Oct 12 12:36 init_data.xml
[2025-10-12 12:40:38] -rw------- 1 boincer umatlas 196379055 Oct 12 12:39 HITS.46676269._072179.pool.root.1
[2025-10-12 12:40:38] -rw-r--r-- 1 boincer umatlas       529 Oct 12 12:39 boinc_task_state.xml
[2025-10-12 12:40:38] -rw------- 1 boincer umatlas      1049 Oct 12 12:39 memory_monitor_summary.json
[2025-10-12 12:40:38] -rw------- 1 boincer umatlas    377655 Oct 12 12:39 log.46676269._072179.job.log.tgz.1
[2025-10-12 12:40:38] -rw------- 1 boincer umatlas      7850 Oct 12 12:40 heartbeat.json
[2025-10-12 12:40:38] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 12:40 boinc_mmap_file
[2025-10-12 12:40:38] -rw-r--r-- 1 boincer umatlas        27 Oct 12 12:40 wrapper_checkpoint.txt
[2025-10-12 12:40:38] -rw------- 1 boincer umatlas        95 Oct 12 12:40 pilot_heartbeat.json
[2025-10-12 12:40:38] -rw------- 1 boincer umatlas      4817 Oct 12 12:40 pilotlog.txt
[2025-10-12 12:40:38] -rw------- 1 boincer umatlas    587790 Oct 12 12:40 log.46676269._072179.job.log.1
[2025-10-12 12:40:38] -rw------- 1 boincer umatlas       357 Oct 12 12:40 output.list
[2025-10-12 12:40:38] -rw-r--r-- 1 boincer umatlas       620 Oct 12 12:40 runtime_log
[2025-10-12 12:40:38] -rw------- 1 boincer umatlas    983040 Oct 12 12:40 result.tar.gz
[2025-10-12 12:40:38] -rw-r--r-- 1 boincer umatlas      8705 Oct 12 12:40 runtime_log.err
[2025-10-12 12:40:38] -rw------- 1 boincer umatlas       659 Oct 12 12:40 0i9NDm1T4R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqmiNDmrKQ99n.diag
[2025-10-12 12:40:38] -rw-r--r-- 1 boincer umatlas     21817 Oct 12 12:40 stderr.txt
[2025-10-12 12:40:38] HITS file was successfully produced:
[2025-10-12 12:40:38] -rw------- 1 boincer umatlas 196379055 Oct 12 12:39 shared/HITS.pool.root.1
[2025-10-12 12:40:38]  *** Contents of shared directory: ***
[2025-10-12 12:40:38] total 410108
[2025-10-12 12:40:38] -rw-r--r-- 2 boincer umatlas 221984788 Oct 12 11:33 ATLAS.root_0
[2025-10-12 12:40:38] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 11:33 start_atlas.sh
[2025-10-12 12:40:38] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 11:33 input.tar.gz
[2025-10-12 12:40:38] -rw------- 1 boincer umatlas 196379055 Oct 12 12:39 HITS.pool.root.1
[2025-10-12 12:40:38] -rw------- 1 boincer umatlas    983040 Oct 12 12:40 result.tar.gz
12:40:39 (6132): run_atlas exited; CPU time 42030.554239
12:40:39 (6132): called boinc_finish(0)

</stderr_txt>
]]>

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