Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:32:01 (2510576): wrapper (7.7.26015): starting
11:32:01 (2510576): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 11:32:01] Arguments: --nthreads 8
[2025-10-12 11:32:01] Threads: 8
[2025-10-12 11:32:01] Checking for CVMFS
[2025-10-12 11:32:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 11:32:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 11:32:02] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 11:32:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 11:32:03] 2.13.2.0 7513 77765 110184 151625 2 269 40405742 40960001 33241 16776704 0 466375756 99.756 291151242 46116 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 11:32:03] CVMFS is ok
[2025-10-12 11:32:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 11:32:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 11:32:03] Further information can be found at the LHC@home message board.
[2025-10-12 11:32:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 11:32:03] Checking for apptainer binary...
[2025-10-12 11:32:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 11:32:03] Running /usr/bin/apptainer --version
[2025-10-12 11:32:03] apptainer version 1.4.3-1.el9
[2025-10-12 11:32:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 11:32:04] c-208-40.aglt2.org
[2025-10-12 11:32:04] apptainer works
[2025-10-12 11:32:04] Set ATHENA_PROC_NUMBER=8
[2025-10-12 11:32:04] Set ATHENA_CORE_NUMBER=8
[2025-10-12 11:32:04] Starting ATLAS job with PandaID=6839866294
[2025-10-12 11:32:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 14:00:00]  *** The last 200 lines of the pilot log: ***
[2025-10-12 14:00:00] 2025-10-12 17:59:22,461 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 14:00:00] 2025-10-12 17:59:22,492 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3787.2199140625007
[2025-10-12 14:00:00] 2025-10-12 17:59:22,537 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6839866294/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 14:00:00] 2025-10-12 17:59:22,538 | INFO     | extracted standard info from prmon json
[2025-10-12 14:00:00] 2025-10-12 17:59:22,538 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 14:00:00] 2025-10-12 17:59:22,538 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 14:00:00] 2025-10-12 17:59:22,559 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 14:00:00] 2025-10-12 17:59:22,559 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 14:00:00] 2025-10-12 17:59:22,563 | INFO     | fitting pss+swap vs Time
[2025-10-12 14:00:00] 2025-10-12 17:59:22,563 | INFO     | sum of square deviations: 869221106.4397146
[2025-10-12 14:00:00] 2025-10-12 17:59:22,563 | INFO     | sum of deviations: 22328850947.049656
[2025-10-12 14:00:00] 2025-10-12 17:59:22,564 | INFO     | mean x: 1760287638.1347518
[2025-10-12 14:00:00] 2025-10-12 17:59:22,564 | INFO     | mean y: 2437459.418439716
[2025-10-12 14:00:00] 2025-10-12 17:59:22,564 | INFO     | -- intersect: -45216437237.30522
[2025-10-12 14:00:00] 2025-10-12 17:59:22,564 | INFO     | intersect: -45216437237.30522
[2025-10-12 14:00:00] 2025-10-12 17:59:22,564 | INFO     | chi2: 4.154246430751342
[2025-10-12 14:00:00] 2025-10-12 17:59:22,564 | INFO     | sum of square deviations: 779980115.875
[2025-10-12 14:00:00] 2025-10-12 17:59:22,564 | INFO     | sum of deviations: 30781927021.0
[2025-10-12 14:00:00] 2025-10-12 17:59:22,564 | INFO     | mean x: 1760287485.625
[2025-10-12 14:00:00] 2025-10-12 17:59:22,564 | INFO     | mean y: 2451457.3529411764
[2025-10-12 14:00:00] 2025-10-12 17:59:22,565 | INFO     | -- intersect: -69467320676.13573
[2025-10-12 14:00:00] 2025-10-12 17:59:22,565 | INFO     | intersect: -69467320676.13573
[2025-10-12 14:00:00] 2025-10-12 17:59:22,565 | INFO     | chi2: 3.4366251863157458
[2025-10-12 14:00:00] 2025-10-12 17:59:22,565 | INFO     | current chi2=3.4366251863157458 (change=17.274402383149095 %)
[2025-10-12 14:00:00] 2025-10-12 17:59:22,565 | INFO     | right removable region: 135
[2025-10-12 14:00:00] 2025-10-12 17:59:22,591 | INFO     | sum of square deviations: 779985731.3455875
[2025-10-12 14:00:00] 2025-10-12 17:59:22,592 | INFO     | sum of deviations: -16505310123.838232
[2025-10-12 14:00:00] 2025-10-12 17:59:22,600 | INFO     | mean x: 1760287790.639706
[2025-10-12 14:00:00] 2025-10-12 17:59:22,600 | INFO     | mean y: 2503456.044117647
[2025-10-12 14:00:00] 2025-10-12 17:59:22,600 | INFO     | -- intersect: 37252025753.83267
[2025-10-12 14:00:00] 2025-10-12 17:59:22,600 | INFO     | intersect: 37252025753.83267
[2025-10-12 14:00:00] 2025-10-12 17:59:22,600 | INFO     | chi2: 0.9071462626381406
[2025-10-12 14:00:00] 2025-10-12 17:59:22,601 | INFO     | current chi2=0.9071462626381406 (change=78.16339791681368 %)
[2025-10-12 14:00:00] 2025-10-12 17:59:22,601 | INFO     | sum of square deviations: 697084107.5267191
[2025-10-12 14:00:00] 2025-10-12 17:59:22,601 | INFO     | sum of deviations: -21049841873.763367
[2025-10-12 14:00:00] 2025-10-12 17:59:22,601 | INFO     | mean x: 1760287943.1374047
[2025-10-12 14:00:00] 2025-10-12 17:59:22,601 | INFO     | mean y: 2511661.9312977097
[2025-10-12 14:00:00] 2025-10-12 17:59:22,601 | INFO     | -- intersect: 53157909203.27356
[2025-10-12 14:00:00] 2025-10-12 17:59:22,601 | INFO     | intersect: 53157909203.27356
[2025-10-12 14:00:00] 2025-10-12 17:59:22,601 | INFO     | chi2: 0.8115025776398664
[2025-10-12 14:00:00] 2025-10-12 17:59:22,601 | INFO     | current chi2=0.8115025776398664 (change=10.543358765556231 %)
[2025-10-12 14:00:00] 2025-10-12 17:59:22,601 | INFO     | left removable region: 20
[2025-10-12 14:00:00] 2025-10-12 17:59:22,602 | INFO     | sum of square deviations: 471587354.29565203
[2025-10-12 14:00:00] 2025-10-12 17:59:22,602 | INFO     | sum of deviations: -9798970154.547825
[2025-10-12 14:00:00] 2025-10-12 17:59:22,602 | INFO     | mean x: 1760288065.1217391
[2025-10-12 14:00:00] 2025-10-12 17:59:22,602 | INFO     | mean y: 2525912.539130435
[2025-10-12 14:00:00] 2025-10-12 17:59:22,602 | INFO     | -- intersect: 36579016050.399666
[2025-10-12 14:00:00] 2025-10-12 17:59:22,602 | INFO     | intersect: 36579016050.399666
[2025-10-12 14:00:00] 2025-10-12 17:59:22,602 | INFO     | chi2: 0.026960242621507837
[2025-10-12 14:00:00] 2025-10-12 17:59:22,602 | INFO     | -- intersect: 36579016050.399666
[2025-10-12 14:00:00] 2025-10-12 17:59:22,602 | INFO     | current memory leak: -20.78 B/s (using 115 data points, chi2=0.03)
[2025-10-12 14:00:00] 2025-10-12 17:59:22,603 | INFO     | could have reported an average CPU frequency of 3783 MHz (8 samples)
[2025-10-12 14:00:00] 2025-10-12 17:59:22,620 | INFO     | ..............................
[2025-10-12 14:00:00] 2025-10-12 17:59:22,620 | INFO     | . Timing measurements:
[2025-10-12 14:00:00] 2025-10-12 17:59:22,620 | INFO     | . get job = 0 s
[2025-10-12 14:00:00] 2025-10-12 17:59:22,621 | INFO     | . initial setup = 6 s
[2025-10-12 14:00:00] 2025-10-12 17:59:22,621 | INFO     | . payload setup = 46 s
[2025-10-12 14:00:00] 2025-10-12 17:59:22,621 | INFO     | . stage-in = 0 s
[2025-10-12 14:00:00] 2025-10-12 17:59:22,621 | INFO     | . payload execution = 8592 s
[2025-10-12 14:00:00] 2025-10-12 17:59:22,621 | INFO     | . stage-out = 3 s
[2025-10-12 14:00:00] 2025-10-12 17:59:22,621 | INFO     | . log creation = 0 s
[2025-10-12 14:00:00] 2025-10-12 17:59:22,621 | INFO     | ..............................
[2025-10-12 14:00:00] 2025-10-12 17:59:23,144 | INFO     | 
[2025-10-12 14:00:00] 2025-10-12 17:59:23,144 | INFO     | job summary report
[2025-10-12 14:00:00] 2025-10-12 17:59:23,144 | INFO     | --------------------------------------------------
[2025-10-12 14:00:00] 2025-10-12 17:59:23,144 | INFO     | PanDA job id: 6839866294
[2025-10-12 14:00:00] 2025-10-12 17:59:23,144 | INFO     | task id: 46676269
[2025-10-12 14:00:00] 2025-10-12 17:59:23,144 | INFO     | errors: (none)
[2025-10-12 14:00:00] 2025-10-12 17:59:23,144 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 14:00:00] 2025-10-12 17:59:23,144 | INFO     | pilot state: finished 
[2025-10-12 14:00:00] 2025-10-12 17:59:23,144 | INFO     | transexitcode: 0
[2025-10-12 14:00:00] 2025-10-12 17:59:23,145 | INFO     | exeerrorcode: 0
[2025-10-12 14:00:00] 2025-10-12 17:59:23,145 | INFO     | exeerrordiag: 
[2025-10-12 14:00:00] 2025-10-12 17:59:23,145 | INFO     | exitcode: 0
[2025-10-12 14:00:00] 2025-10-12 17:59:23,145 | INFO     | exitmsg: OK
[2025-10-12 14:00:00] 2025-10-12 17:59:23,145 | INFO     | cpuconsumptiontime: 23530 s
[2025-10-12 14:00:00] 2025-10-12 17:59:23,145 | INFO     | nevents: 400
[2025-10-12 14:00:00] 2025-10-12 17:59:23,145 | INFO     | neventsw: 0
[2025-10-12 14:00:00] 2025-10-12 17:59:23,145 | INFO     | pid: 2543518
[2025-10-12 14:00:00] 2025-10-12 17:59:23,145 | INFO     | pgrp: 2543518
[2025-10-12 14:00:00] 2025-10-12 17:59:23,145 | INFO     | corecount: 8
[2025-10-12 14:00:00] 2025-10-12 17:59:23,145 | INFO     | event service: False
[2025-10-12 14:00:00] 2025-10-12 17:59:23,145 | INFO     | sizes: {0: 2348635, 1: 2348834, 2: 2348834, 12: 2348862, 23: 2348890, 33: 2349180, 34: 2349364, 8643: 2377327, 8648: 2386325, 8651: 2386381, 8687: 2386575}
[2025-10-12 14:00:00] 2025-10-12 17:59:23,145 | INFO     | --------------------------------------------------
[2025-10-12 14:00:00] 2025-10-12 17:59:23,145 | INFO     | 
[2025-10-12 14:00:00] 2025-10-12 17:59:23,145 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-10-12 14:00:00] 2025-10-12 17:59:23,303 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 14:00:00] 2025-10-12 17:59:23,303 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 14:00:00] 2025-10-12 17:59:23,303 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 14:00:00] 2025-10-12 17:59:23,303 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 14:00:00] 2025-10-12 17:59:23,303 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 14:00:00] 2025-10-12 17:59:23,304 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 14:00:00] 2025-10-12 17:59:23,304 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 14:00:00] 2025-10-12 17:59:23,304 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 14:00:00] 2025-10-12 17:59:23,304 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 14:00:00] 2025-10-12 17:59:23,304 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 14:00:00] 2025-10-12 17:59:23,304 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 14:00:00] 2025-10-12 17:59:23,304 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 14:00:00] 2025-10-12 17:59:23,304 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 14:00:00] 2025-10-12 17:59:23,304 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 14:00:00] 2025-10-12 17:59:23,304 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 14:00:00] 2025-10-12 17:59:23,304 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 14:00:00] 2025-10-12 17:59:23,304 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 14:00:00] 2025-10-12 17:59:23,304 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 14:00:00] 2025-10-12 17:59:23,304 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 14:00:00] 2025-10-12 17:59:23,306 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 14:00:00] 2025-10-12 17:59:23,306 | INFO     | job 6839866294 has completed (purged errors)
[2025-10-12 14:00:00] 2025-10-12 17:59:23,306 | INFO     | overall cleanup function is called
[2025-10-12 14:00:00] 2025-10-12 17:59:23,530 | INFO     | PID=2526032 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 14:00:00] 2025-10-12 17:59:23,531 | INFO     | .. there are 36 such processes running
[2025-10-12 14:00:00] 2025-10-12 17:59:24,375 | INFO     | --- collectZombieJob: --- 10, [2543518]
[2025-10-12 14:00:00] 2025-10-12 17:59:24,375 | INFO     | zombie collector waiting for pid 2543518
[2025-10-12 14:00:00] 2025-10-12 17:59:24,375 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 14:00:00] 2025-10-12 17:59:24,375 | INFO     | collected zombie processes
[2025-10-12 14:00:00] 2025-10-12 17:59:24,375 | INFO     | will attempt to kill all subprocesses of pid=2543518
[2025-10-12 14:00:00] 2025-10-12 17:59:26,240 | INFO     | process IDs to be killed: [2543518] (in reverse order)
[2025-10-12 14:00:00] 2025-10-12 17:59:26,720 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 14:00:00] 2025-10-12 17:59:26,720 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 14:00:00] 2025-10-12 17:59:26,782 | INFO     | did not find any defunct processes belonging to 2543518
[2025-10-12 14:00:00] 2025-10-12 17:59:26,836 | INFO     | did not find any defunct processes belonging to 2543518
[2025-10-12 14:00:00] 2025-10-12 17:59:26,836 | INFO     | ready for new job
[2025-10-12 14:00:00] 2025-10-12 17:59:26,836 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 14:00:00] 2025-10-12 17:59:26,838 | INFO     | ***************************************
[2025-10-12 14:00:00] 2025-10-12 17:59:26,838 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 14:00:00] 2025-10-12 17:59:26,838 | INFO     | ***************************************
[2025-10-12 14:00:00] 2025-10-12 17:59:26,838 | INFO     | 
[2025-10-12 14:00:00] 2025-10-12 17:59:26,873 | INFO     | architecture information:
[2025-10-12 14:00:00] 2025-10-12 17:59:26,878 | INFO     | executing command: cat /etc/os-release
[2025-10-12 14:00:00] 2025-10-12 17:59:27,022 | INFO     | cat /etc/os-release:
[2025-10-12 14:00:00] NAME="CentOS Linux"
[2025-10-12 14:00:00] VERSION="7 (Core)"
[2025-10-12 14:00:00] ID="centos"
[2025-10-12 14:00:00] ID_LIKE="rhel fedora"
[2025-10-12 14:00:00] VERSION_ID="7"
[2025-10-12 14:00:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 14:00:00] ANSI_COLOR="0;31"
[2025-10-12 14:00:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 14:00:00] HOME_URL="https://www.centos.org/"
[2025-10-12 14:00:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 14:00:00] 
[2025-10-12 14:00:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 14:00:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 14:00:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 14:00:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 14:00:00] 
[2025-10-12 14:00:00] 2025-10-12 17:59:27,022 | INFO     | ***************************************
[2025-10-12 14:00:00] 2025-10-12 17:59:27,526 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-10-12 14:00:00] 2025-10-12 17:59:27,631 | INFO     | sufficient remaining disk space (169836806144 B)
[2025-10-12 14:00:00] 2025-10-12 17:59:27,632 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 14:00:00] 2025-10-12 17:59:27,632 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 14:00:00] 2025-10-12 17:59:27,632 | INFO     | update_server=False
[2025-10-12 14:00:00] 2025-10-12 17:59:27,632 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 14:00:00] 2025-10-12 17:59:27,633 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:00:00] 2025-10-12 17:59:27,634 | INFO     | aborting loop
[2025-10-12 14:00:00] 2025-10-12 17:59:27,634 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 14:00:00] 2025-10-12 17:59:27,969 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:00:00] 2025-10-12 17:59:27,970 | INFO     | all data control threads have been joined
[2025-10-12 14:00:00] 2025-10-12 17:59:28,637 | INFO     | [job] retrieve thread has finished
[2025-10-12 14:00:00] 2025-10-12 17:59:28,639 | INFO     | [job] job monitor thread has finished
[2025-10-12 14:00:00] 2025-10-12 17:59:28,787 | INFO     | [job] validate thread has finished
[2025-10-12 14:00:00] 2025-10-12 17:59:28,819 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 14:00:00] 2025-10-12 17:59:28,841 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 14:00:00] 2025-10-12 17:59:28,971 | INFO     | all job control threads have been joined
[2025-10-12 14:00:00] 2025-10-12 17:59:28,986 | INFO     | [data] control thread has finished
[2025-10-12 14:00:00] 2025-10-12 17:59:28,995 | INFO     | [job] queue monitor thread has finished
[2025-10-12 14:00:00] 2025-10-12 17:59:29,037 | INFO     | all payload control threads have been joined
[2025-10-12 14:00:00] 2025-10-12 17:59:29,138 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 14:00:00] 2025-10-12 17:59:29,213 | INFO     | [payload] validate_post thread has finished
[2025-10-12 14:00:00] 2025-10-12 17:59:29,502 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 14:00:00] 2025-10-12 17:59:29,614 | INFO     | [payload] failed_post thread has finished
[2025-10-12 14:00:00] 2025-10-12 17:59:29,642 | INFO     | [data] copytool_out thread has finished
[2025-10-12 14:00:00] 2025-10-12 17:59:29,788 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 14:00:00] 2025-10-12 17:59:29,788 | INFO     | [data] copytool_in thread has finished
[2025-10-12 14:00:00] 2025-10-12 17:59:29,992 | INFO     | [job] control thread has finished
[2025-10-12 14:00:00] 2025-10-12 17:59:30,043 | INFO     | [payload] control thread has finished
[2025-10-12 14:00:00] 2025-10-12 17:59:33,511 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 14:00:00] 2025-10-12 17:59:41,535 | INFO     | [monitor] cgroup control has ended
[2025-10-12 14:00:00] 2025-10-12 17:59:42,139 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140382295820096)>', '<ExcThread(monitor, started 140381677156096)>']
[2025-10-12 14:00:00] 2025-10-12 17:59:47,165 | INFO     | all workflow threads have been joined
[2025-10-12 14:00:00] 2025-10-12 17:59:47,165 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 14:00:00] 2025-10-12 17:59:47,165 | INFO     | traces error code: 0
[2025-10-12 14:00:00] 2025-10-12 17:59:47,165 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 14:00:00] 2025-10-12 17:59:56,874 | INFO     | PID=2526032 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 14:00:00] 2025-10-12 17:59:56,874 | INFO     | .. there are 36 such processes running
[2025-10-12 14:00:00] 2025-10-12 17:59:56,875 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 14:00:00] 2025-10-12 17:59:56,875 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 14:00:00] 2025-10-12 17:59:56,875 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 14:00:00] 2025-10-12 17:59:56,875 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 14:00:00] 2025-10-12 17:59:56,875 | CRITICAL | thread 'MainThread' is not alive
[2025-10-12 14:00:00] 2025-10-12 17:59:56,875 | INFO     | [monitor] control thread has ended
[2025-10-12 14:00:00] 2025-10-12 17:59:58,189 [wrapper] ==== pilot stdout END ====
[2025-10-12 14:00:00] 2025-10-12 17:59:58,223 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 14:00:00] 2025-10-12 17:59:58,239 [wrapper] pilotpid: 2526032
[2025-10-12 14:00:00] 2025-10-12 17:59:58,258 [wrapper] Pilot exit status: 0
[2025-10-12 14:00:00] 2025-10-12 17:59:58,407 [wrapper] pandaids: 6839866294
[2025-10-12 14:00:00] 2025-10-12 17:59:59,152 [wrapper] cleanup supervisor_pilot 3071657 2526033
[2025-10-12 14:00:00] 2025-10-12 17:59:59,215 [wrapper] Test setup, not cleaning
[2025-10-12 14:00:00] 2025-10-12 17:59:59,233 [wrapper] apfmon messages muted
[2025-10-12 14:00:00] 2025-10-12 17:59:59,280 [wrapper] ==== wrapper stdout END ====
[2025-10-12 14:00:00] 2025-10-12 17:59:59,304 [wrapper] ==== wrapper stderr END ====
[2025-10-12 14:00:00]  *** Error codes and diagnostics ***
[2025-10-12 14:00:00]     "exeErrorCode": 0,
[2025-10-12 14:00:00]     "exeErrorDiag": "",
[2025-10-12 14:00:00]     "pilotErrorCode": 0,
[2025-10-12 14:00:00]     "pilotErrorDiag": "",
[2025-10-12 14:00:00]  *** Listing of results directory ***
[2025-10-12 14:00:00] total 410896
[2025-10-12 14:00:00] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 06:16 pilot3.tar.gz
[2025-10-12 14:00:00] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 06:18 queuedata.json
[2025-10-12 14:00:00] -rwx------. 1 boincer umatlas     36292 Oct 12 06:19 runpilot2-wrapper.sh
[2025-10-12 14:00:00] -rw-r--r--. 1 boincer umatlas       100 Oct 12 11:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 14:00:00] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 11:32 run_atlas
[2025-10-12 14:00:00] -rw-r--r--. 1 boincer umatlas       105 Oct 12 11:32 job.xml
[2025-10-12 14:00:00] -rw-r--r--. 2 boincer umatlas 219907019 Oct 12 11:32 EVNT.46676267._003619.pool.root.1
[2025-10-12 14:00:00] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 11:32 start_atlas.sh
[2025-10-12 14:00:00] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 11:32 shared
[2025-10-12 14:00:00] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 11:32 input.tar.gz
[2025-10-12 14:00:00] -rw-r--r--. 1 boincer umatlas         0 Oct 12 11:32 boinc_lockfile
[2025-10-12 14:00:00] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 11:32 pandaJob.out
[2025-10-12 14:00:00] -rw-------. 1 boincer umatlas    975528 Oct 12 11:33 agis_schedconf.cvmfs.json
[2025-10-12 14:00:00] -rw-------. 1 boincer umatlas   1560580 Oct 12 11:33 agis_ddmendpoints.agis.ALL.json
[2025-10-12 14:00:00] drwx------. 5 boincer umatlas      4096 Oct 12 11:33 pilot3
[2025-10-12 14:00:00] -rw-r--r--. 1 boincer umatlas      7173 Oct 12 13:54 init_data.xml
[2025-10-12 14:00:00] -rw-------. 1 boincer umatlas 193918347 Oct 12 13:57 HITS.46676269._076012.pool.root.1
[2025-10-12 14:00:00] -rw-r--r--. 1 boincer umatlas       529 Oct 12 13:57 boinc_task_state.xml
[2025-10-12 14:00:00] -rw-------. 1 boincer umatlas      1049 Oct 12 13:58 memory_monitor_summary.json
[2025-10-12 14:00:00] -rw-------. 1 boincer umatlas    391615 Oct 12 13:58 log.46676269._076012.job.log.tgz.1
[2025-10-12 14:00:00] -rw-------. 1 boincer umatlas        95 Oct 12 13:59 pilot_heartbeat.json
[2025-10-12 14:00:00] -rw-------. 1 boincer umatlas      7812 Oct 12 13:59 heartbeat.json
[2025-10-12 14:00:00] -rw-------. 1 boincer umatlas       893 Oct 12 13:59 pilotlog.txt
[2025-10-12 14:00:00] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 13:59 boinc_mmap_file
[2025-10-12 14:00:00] -rw-r--r--. 1 boincer umatlas        27 Oct 12 13:59 wrapper_checkpoint.txt
[2025-10-12 14:00:00] -rw-------. 1 boincer umatlas   1125402 Oct 12 13:59 log.46676269._076012.job.log.1
[2025-10-12 14:00:00] -rw-------. 1 boincer umatlas       357 Oct 12 13:59 output.list
[2025-10-12 14:00:00] -rw-r--r--. 1 boincer umatlas       620 Oct 12 14:00 runtime_log
[2025-10-12 14:00:00] -rw-------. 1 boincer umatlas   1536000 Oct 12 14:00 result.tar.gz
[2025-10-12 14:00:00] -rw-r--r--. 1 boincer umatlas      8703 Oct 12 14:00 runtime_log.err
[2025-10-12 14:00:00] -rw-------. 1 boincer umatlas       657 Oct 12 14:00 lK1KDmAM8R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm2RjNDmL2RB0n.diag
[2025-10-12 14:00:00] -rw-r--r--. 1 boincer umatlas     21268 Oct 12 14:00 stderr.txt
[2025-10-12 14:00:00] HITS file was successfully produced:
[2025-10-12 14:00:00] -rw-------. 1 boincer umatlas 193918347 Oct 12 13:57 shared/HITS.pool.root.1
[2025-10-12 14:00:00]  *** Contents of shared directory: ***
[2025-10-12 14:00:00] total 406212
[2025-10-12 14:00:00] -rw-r--r--. 2 boincer umatlas 219907019 Oct 12 11:32 ATLAS.root_0
[2025-10-12 14:00:00] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 11:32 start_atlas.sh
[2025-10-12 14:00:00] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 11:32 input.tar.gz
[2025-10-12 14:00:00] -rw-------. 1 boincer umatlas 193918347 Oct 12 13:57 HITS.pool.root.1
[2025-10-12 14:00:00] -rw-------. 1 boincer umatlas   1536000 Oct 12 14:00 result.tar.gz
14:00:02 (2510576): run_atlas exited; CPU time 23809.661026
14:00:02 (2510576): called boinc_finish(0)

</stderr_txt>
]]>

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