Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:16:22 (3834373): wrapper (7.7.26015): starting
19:16:22 (3834373): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 19:16:22] Arguments: --nthreads 4
[2025-10-13 19:16:22] Threads: 4
[2025-10-13 19:16:22] Checking for CVMFS
[2025-10-13 19:16:22] No cvmfs_config command found, will try listing directly
[2025-10-13 19:16:22] CVMFS is ok
[2025-10-13 19:16:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 19:16:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 19:16:22] Further information can be found at the LHC@home message board.
[2025-10-13 19:16:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 19:16:22] Checking for apptainer binary...
[2025-10-13 19:16:22] which: no apptainer in ((null))
[2025-10-13 19:16:22] apptainer is not installed, using version from CVMFS
[2025-10-13 19:16:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 19:16:22] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot96/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2025-10-13 19:16:22] apptainer works
[2025-10-13 19:16:23] Set ATHENA_PROC_NUMBER=4
[2025-10-13 19:16:23] Set ATHENA_CORE_NUMBER=4
[2025-10-13 19:16:23] Starting ATLAS job with PandaID=6839866172
[2025-10-13 19:16:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot96/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
21:02:40 (4086887): wrapper (7.7.26015): starting
21:02:40 (4086887): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 21:02:40] Arguments: --nthreads 4
[2025-10-13 21:02:40] Threads: 4
[2025-10-13 21:02:40] This job has been restarted, cleaning up previous attempt
[2025-10-13 21:02:40] Checking for CVMFS
[2025-10-13 21:02:40] No cvmfs_config command found, will try listing directly
[2025-10-13 21:02:40] CVMFS is ok
[2025-10-13 21:02:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 21:02:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 21:02:40] Further information can be found at the LHC@home message board.
[2025-10-13 21:02:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 21:02:40] Checking for apptainer binary...
[2025-10-13 21:02:40] which: no apptainer in ((null))
[2025-10-13 21:02:40] apptainer is not installed, using version from CVMFS
[2025-10-13 21:02:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 21:02:40] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot96/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2025-10-13 21:02:40] apptainer works
[2025-10-13 21:02:40] Set ATHENA_PROC_NUMBER=4
[2025-10-13 21:02:40] Set ATHENA_CORE_NUMBER=4
[2025-10-13 21:02:40] Starting ATLAS job with PandaID=6839866172
[2025-10-13 21:02:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot96/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 23:42:26]  *** The last 200 lines of the pilot log: ***
[2025-10-13 23:42:26] 2025-10-13 21:31:45,878 | INFO     | sum of square deviations: 869188390.0
[2025-10-13 23:42:26] 2025-10-13 21:31:45,879 | INFO     | sum of deviations: 12416590931.0
[2025-10-13 23:42:26] 2025-10-13 21:31:45,879 | INFO     | mean x: 1760386477.0
[2025-10-13 23:42:26] 2025-10-13 21:31:45,879 | INFO     | mean y: 2321716.780141844
[2025-10-13 23:42:26] 2025-10-13 21:31:45,879 | INFO     | -- intersect: -25145274611.98955
[2025-10-13 23:42:26] 2025-10-13 21:31:45,879 | INFO     | intersect: -25145274611.98955
[2025-10-13 23:42:26] 2025-10-13 21:31:45,880 | INFO     | chi2: 1.1423700796896754
[2025-10-13 23:42:26] 2025-10-13 21:31:45,880 | INFO     | current chi2=1.1423700796896754 (change=-0.10182867501187408 %)
[2025-10-13 23:42:26] 2025-10-13 21:31:45,880 | INFO     | right removable region: 140
[2025-10-13 23:42:26] 2025-10-13 21:31:45,880 | INFO     | sum of square deviations: 869188390.0
[2025-10-13 23:42:26] 2025-10-13 21:31:45,881 | INFO     | sum of deviations: -1218889494.9999986
[2025-10-13 23:42:26] 2025-10-13 21:31:45,881 | INFO     | mean x: 1760386782.0
[2025-10-13 23:42:26] 2025-10-13 21:31:45,881 | INFO     | mean y: 2344467.2978723403
[2025-10-13 23:42:26] 2025-10-13 21:31:45,881 | INFO     | -- intersect: 2470988757.0779657
[2025-10-13 23:42:26] 2025-10-13 21:31:45,881 | INFO     | intersect: 2470988757.0779657
[2025-10-13 23:42:26] 2025-10-13 21:31:45,882 | INFO     | chi2: 0.024488668258935642
[2025-10-13 23:42:26] 2025-10-13 21:31:45,882 | INFO     | current chi2=0.024488668258935642 (change=97.85414506374231 %)
[2025-10-13 23:42:26] 2025-10-13 21:31:45,882 | INFO     | sum of square deviations: 779958810.0
[2025-10-13 23:42:26] 2025-10-13 21:31:45,883 | INFO     | sum of deviations: 1463212246.0
[2025-10-13 23:42:26] 2025-10-13 21:31:45,883 | INFO     | mean x: 1760386934.5
[2025-10-13 23:42:26] 2025-10-13 21:31:45,883 | INFO     | mean y: 2339849.2647058824
[2025-10-13 23:42:26] 2025-10-13 21:31:45,883 | INFO     | -- intersect: -3300167523.219233
[2025-10-13 23:42:26] 2025-10-13 21:31:45,883 | INFO     | intersect: -3300167523.219233
[2025-10-13 23:42:26] 2025-10-13 21:31:45,883 | INFO     | chi2: 0.006611039182159139
[2025-10-13 23:42:26] 2025-10-13 21:31:45,883 | INFO     | current chi2=0.006611039182159139 (change=73.00368026445518 %)
[2025-10-13 23:42:26] 2025-10-13 21:31:45,884 | INFO     | sum of square deviations: 697054930.0
[2025-10-13 23:42:26] 2025-10-13 21:31:45,884 | INFO     | sum of deviations: 1664397871.0000002
[2025-10-13 23:42:26] 2025-10-13 21:31:45,885 | INFO     | mean x: 1760387087.0
[2025-10-13 23:42:26] 2025-10-13 21:31:45,885 | INFO     | mean y: 2339523.099236641
[2025-10-13 23:42:26] 2025-10-13 21:31:45,885 | INFO     | -- intersect: -4201037274.9655766
[2025-10-13 23:42:26] 2025-10-13 21:31:45,885 | INFO     | intersect: -4201037274.9655766
[2025-10-13 23:42:26] 2025-10-13 21:31:45,885 | INFO     | chi2: 0.00024375456984276602
[2025-10-13 23:42:26] 2025-10-13 21:31:45,885 | INFO     | current chi2=0.00024375456984276602 (change=96.31291597090251 %)
[2025-10-13 23:42:26] 2025-10-13 21:31:45,886 | INFO     | sum of square deviations: 620244187.5
[2025-10-13 23:42:26] 2025-10-13 21:31:45,886 | INFO     | sum of deviations: 1398992086.4999998
[2025-10-13 23:42:26] 2025-10-13 21:31:45,886 | INFO     | mean x: 1760387239.5
[2025-10-13 23:42:26] 2025-10-13 21:31:45,887 | INFO     | mean y: 2340047.261904762
[2025-10-13 23:42:26] 2025-10-13 21:31:45,887 | INFO     | -- intersect: -3968302268.8921337
[2025-10-13 23:42:26] 2025-10-13 21:31:45,887 | INFO     | intersect: -3968302268.8921337
[2025-10-13 23:42:26] 2025-10-13 21:31:45,887 | INFO     | chi2: 0.0002096453367511127
[2025-10-13 23:42:26] 2025-10-13 21:31:45,887 | INFO     | current chi2=0.0002096453367511127 (change=13.993269177950381 %)
[2025-10-13 23:42:26] 2025-10-13 21:31:45,887 | INFO     | left removable region: 40
[2025-10-13 23:42:26] 2025-10-13 21:31:45,887 | INFO     | sum of square deviations: 310052325.0
[2025-10-13 23:42:26] 2025-10-13 21:31:45,888 | INFO     | sum of deviations: 625235878.5
[2025-10-13 23:42:26] 2025-10-13 21:31:45,888 | INFO     | mean x: 1760387666.5
[2025-10-13 23:42:26] 2025-10-13 21:31:45,888 | INFO     | mean y: 2341638.89
[2025-10-13 23:42:26] 2025-10-13 21:31:45,888 | INFO     | -- intersect: -3547567329.4258885
[2025-10-13 23:42:26] 2025-10-13 21:31:45,888 | INFO     | intersect: -3547567329.4258885
[2025-10-13 23:42:26] 2025-10-13 21:31:45,889 | INFO     | chi2: 0.00015475199423981023
[2025-10-13 23:42:26] 2025-10-13 21:31:45,889 | INFO     | -- intersect: -3547567329.4258885
[2025-10-13 23:42:26] 2025-10-13 21:31:45,889 | INFO     | current memory leak: 2.02 B/s (using 100 data points, chi2=0.00)
[2025-10-13 23:42:26] 2025-10-13 21:31:45,889 | INFO     | could have reported an average CPU frequency of 2705 MHz (8 samples)
[2025-10-13 23:42:26] 2025-10-13 21:31:45,889 | INFO     | ..............................
[2025-10-13 23:42:26] 2025-10-13 21:31:45,889 | INFO     | . Timing measurements:
[2025-10-13 23:42:26] 2025-10-13 21:31:45,889 | INFO     | . get job = 0 s
[2025-10-13 23:42:26] 2025-10-13 21:31:45,890 | INFO     | . initial setup = 1 s
[2025-10-13 23:42:26] 2025-10-13 21:31:45,890 | INFO     | . payload setup = 8 s
[2025-10-13 23:42:26] 2025-10-13 21:31:45,890 | INFO     | . stage-in = 0 s
[2025-10-13 23:42:26] 2025-10-13 21:31:45,890 | INFO     | . payload execution = 8892 s
[2025-10-13 23:42:26] 2025-10-13 21:31:45,890 | INFO     | . stage-out = 1 s
[2025-10-13 23:42:26] 2025-10-13 21:31:45,890 | INFO     | . log creation = 0 s
[2025-10-13 23:42:26] 2025-10-13 21:31:45,890 | INFO     | ..............................
[2025-10-13 23:42:26] 2025-10-13 21:31:46,464 | INFO     | 
[2025-10-13 23:42:26] 2025-10-13 21:31:46,464 | INFO     | job summary report
[2025-10-13 23:42:26] 2025-10-13 21:31:46,465 | INFO     | --------------------------------------------------
[2025-10-13 23:42:26] 2025-10-13 21:31:46,465 | INFO     | PanDA job id: 6839866172
[2025-10-13 23:42:26] 2025-10-13 21:31:46,465 | INFO     | task id: 46676269
[2025-10-13 23:42:26] 2025-10-13 21:31:46,465 | INFO     | errors: (none)
[2025-10-13 23:42:26] 2025-10-13 21:31:46,465 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 23:42:26] 2025-10-13 21:31:46,465 | INFO     | pilot state: finished 
[2025-10-13 23:42:26] 2025-10-13 21:31:46,465 | INFO     | transexitcode: 0
[2025-10-13 23:42:26] 2025-10-13 21:31:46,465 | INFO     | exeerrorcode: 0
[2025-10-13 23:42:26] 2025-10-13 21:31:46,465 | INFO     | exeerrordiag: 
[2025-10-13 23:42:26] 2025-10-13 21:31:46,465 | INFO     | exitcode: 0
[2025-10-13 23:42:26] 2025-10-13 21:31:46,465 | INFO     | exitmsg: OK
[2025-10-13 23:42:26] 2025-10-13 21:31:46,466 | INFO     | cpuconsumptiontime: 33917 s
[2025-10-13 23:42:26] 2025-10-13 21:31:46,466 | INFO     | nevents: 400
[2025-10-13 23:42:26] 2025-10-13 21:31:46,466 | INFO     | neventsw: 0
[2025-10-13 23:42:26] 2025-10-13 21:31:46,466 | INFO     | pid: 4109716
[2025-10-13 23:42:26] 2025-10-13 21:31:46,466 | INFO     | pgrp: 4109716
[2025-10-13 23:42:26] 2025-10-13 21:31:46,466 | INFO     | corecount: 4
[2025-10-13 23:42:26] 2025-10-13 21:31:46,466 | INFO     | event service: False
[2025-10-13 23:42:26] 2025-10-13 21:31:46,466 | INFO     | sizes: {0: 2348635, 1: 2348890, 7: 2349152, 12: 2349180, 8904: 2377680, 8905: 2386700, 8908: 2386884, 8914: 2387078}
[2025-10-13 23:42:26] 2025-10-13 21:31:46,466 | INFO     | --------------------------------------------------
[2025-10-13 23:42:26] 2025-10-13 21:31:46,466 | INFO     | 
[2025-10-13 23:42:26] 2025-10-13 21:31:46,467 | INFO     | executing command: ls -lF /scratch/boinc/var/slot96/slots/0
[2025-10-13 23:42:26] 2025-10-13 21:31:46,501 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 23:42:26] 2025-10-13 21:31:46,501 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 23:42:26] 2025-10-13 21:31:46,502 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 23:42:26] 2025-10-13 21:31:46,502 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 23:42:26] 2025-10-13 21:31:46,502 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 23:42:26] 2025-10-13 21:31:46,502 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 23:42:26] 2025-10-13 21:31:46,502 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 23:42:26] 2025-10-13 21:31:46,502 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 23:42:26] 2025-10-13 21:31:46,502 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 23:42:26] 2025-10-13 21:31:46,503 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 23:42:26] 2025-10-13 21:31:46,503 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 23:42:26] 2025-10-13 21:31:46,503 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 23:42:26] 2025-10-13 21:31:46,503 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 23:42:26] 2025-10-13 21:31:46,503 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 23:42:26] 2025-10-13 21:31:46,503 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 23:42:26] 2025-10-13 21:31:46,503 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 23:42:26] 2025-10-13 21:31:46,503 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 23:42:26] 2025-10-13 21:31:46,503 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 23:42:26] 2025-10-13 21:31:46,503 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 23:42:26] 2025-10-13 21:31:46,504 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 23:42:26] 2025-10-13 21:31:46,504 | INFO     | job 6839866172 has completed (purged errors)
[2025-10-13 23:42:26] 2025-10-13 21:31:46,504 | INFO     | overall cleanup function is called
[2025-10-13 23:42:26] 2025-10-13 21:31:46,862 | INFO     | PID=4094496 has CPU usage=23.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-13 23:42:26] 2025-10-13 21:31:46,862 | INFO     | .. there are 10 such processes running
[2025-10-13 23:42:26] 2025-10-13 21:31:47,515 | INFO     | --- collectZombieJob: --- 10, [4109716]
[2025-10-13 23:42:26] 2025-10-13 21:31:47,515 | INFO     | zombie collector waiting for pid 4109716
[2025-10-13 23:42:26] 2025-10-13 21:31:47,515 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 23:42:26] 2025-10-13 21:31:47,515 | INFO     | collected zombie processes
[2025-10-13 23:42:26] 2025-10-13 21:31:47,515 | INFO     | will attempt to kill all subprocesses of pid=4109716
[2025-10-13 23:42:26] 2025-10-13 21:31:48,257 | INFO     | process IDs to be killed: [4109716] (in reverse order)
[2025-10-13 23:42:26] 2025-10-13 21:31:48,519 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 23:42:26] 2025-10-13 21:31:48,519 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 23:42:26] 2025-10-13 21:31:48,553 | INFO     | did not find any defunct processes belonging to 4109716
[2025-10-13 23:42:26] 2025-10-13 21:31:48,584 | INFO     | did not find any defunct processes belonging to 4109716
[2025-10-13 23:42:26] 2025-10-13 21:31:48,584 | INFO     | ready for new job
[2025-10-13 23:42:26] 2025-10-13 21:31:48,584 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 23:42:26] 2025-10-13 21:31:48,587 | INFO     | ***************************************
[2025-10-13 23:42:26] 2025-10-13 21:31:48,587 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 23:42:26] 2025-10-13 21:31:48,587 | INFO     | ***************************************
[2025-10-13 23:42:26] 2025-10-13 21:31:48,587 | INFO     | 
[2025-10-13 23:42:26] 2025-10-13 21:31:48,596 | INFO     | architecture information:
[2025-10-13 23:42:26] 2025-10-13 21:31:48,596 | INFO     | executing command: cat /etc/os-release
[2025-10-13 23:42:26] 2025-10-13 21:31:48,620 | INFO     | cat /etc/os-release:
[2025-10-13 23:42:26] NAME="CentOS Linux"
[2025-10-13 23:42:26] VERSION="7 (Core)"
[2025-10-13 23:42:26] ID="centos"
[2025-10-13 23:42:26] ID_LIKE="rhel fedora"
[2025-10-13 23:42:26] VERSION_ID="7"
[2025-10-13 23:42:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 23:42:26] ANSI_COLOR="0;31"
[2025-10-13 23:42:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 23:42:26] HOME_URL="https://www.centos.org/"
[2025-10-13 23:42:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 23:42:26] 
[2025-10-13 23:42:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 23:42:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 23:42:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 23:42:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 23:42:26] 
[2025-10-13 23:42:26] 2025-10-13 21:31:48,621 | INFO     | ***************************************
[2025-10-13 23:42:26] 2025-10-13 21:31:49,123 | INFO     | executing command: df -mP /scratch/boinc/var/slot96/slots/0
[2025-10-13 23:42:26] 2025-10-13 21:31:49,154 | INFO     | sufficient remaining disk space (3307045126144 B)
[2025-10-13 23:42:26] 2025-10-13 21:31:49,154 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 23:42:26] 2025-10-13 21:31:49,155 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 23:42:26] 2025-10-13 21:31:49,155 | INFO     | update_server=False
[2025-10-13 23:42:26] 2025-10-13 21:31:49,155 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 23:42:26] 2025-10-13 21:31:49,410 | INFO     | all data control threads have been joined
[2025-10-13 23:42:26] 2025-10-13 21:31:49,494 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 23:42:26] 2025-10-13 21:31:49,495 | INFO     | aborting loop
[2025-10-13 23:42:26] 2025-10-13 21:31:49,808 | INFO     | all job control threads have been joined
[2025-10-13 23:42:26] 2025-10-13 21:31:49,871 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 23:42:26] 2025-10-13 21:31:49,884 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 23:42:26] 2025-10-13 21:31:50,009 | INFO     | all payload control threads have been joined
[2025-10-13 23:42:26] 2025-10-13 21:31:50,160 | INFO     | [job] retrieve thread has finished
[2025-10-13 23:42:26] 2025-10-13 21:31:50,413 | INFO     | [data] control thread has finished
[2025-10-13 23:42:26] 2025-10-13 21:31:50,496 | INFO     | [job] job monitor thread has finished
[2025-10-13 23:42:26] 2025-10-13 21:31:50,512 | INFO     | [job] validate thread has finished
[2025-10-13 23:42:26] 2025-10-13 21:31:50,814 | INFO     | [job] control thread has finished
[2025-10-13 23:42:26] 2025-10-13 21:31:50,895 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 23:42:26] 2025-10-13 21:31:50,896 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 23:42:26] 2025-10-13 21:31:50,997 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 23:42:26] 2025-10-13 21:31:51,015 | INFO     | [payload] control thread has finished
[2025-10-13 23:42:26] 2025-10-13 21:31:51,159 | INFO     | [payload] validate_post thread has finished
[2025-10-13 23:42:26] 2025-10-13 21:31:51,485 | INFO     | [data] copytool_in thread has finished
[2025-10-13 23:42:26] 2025-10-13 21:31:51,657 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 23:42:26] 2025-10-13 21:31:51,757 | INFO     | [payload] failed_post thread has finished
[2025-10-13 23:42:26] 2025-10-13 21:31:51,877 | INFO     | [data] copytool_out thread has finished
[2025-10-13 23:42:26] 2025-10-13 21:31:52,002 | INFO     | [job] queue monitor thread has finished
[2025-10-13 23:42:26] 2025-10-13 21:31:53,890 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 23:42:26] 2025-10-13 21:32:00,137 | INFO     | job.realtimelogging is not enabled
[2025-10-13 23:42:26] 2025-10-13 21:32:01,142 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 23:42:26] 2025-10-13 21:32:07,470 | INFO     | [monitor] cgroup control has ended
[2025-10-13 23:42:26] 2025-10-13 21:32:08,352 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22941236119360)>', '<ExcThread(monitor, started 22940999444224)>']
[2025-10-13 23:42:26] 2025-10-13 21:32:13,377 | INFO     | all workflow threads have been joined
[2025-10-13 23:42:26] 2025-10-13 21:32:13,377 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 23:42:26] 2025-10-13 21:32:13,378 | INFO     | traces error code: 0
[2025-10-13 23:42:26] 2025-10-13 21:32:13,378 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 23:42:26] 2025-10-13 21:32:19,900 | INFO     | PID=4094496 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 23:42:26] 2025-10-13 21:32:19,903 | INFO     | .. there are 10 such processes running
[2025-10-13 23:42:26] 2025-10-13 21:32:19,903 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 23:42:26] 2025-10-13 21:32:19,903 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 23:42:26] 2025-10-13 21:32:19,903 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 23:42:26] 2025-10-13 21:32:19,903 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 23:42:26] 2025-10-13 21:32:19,903 | INFO     | [monitor] control thread has ended
[2025-10-13 23:42:26] 2025-10-13 21:32:20,045 [wrapper] ==== pilot stdout END ====
[2025-10-13 23:42:26] 2025-10-13 21:32:20,049 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 23:42:26] 2025-10-13 21:32:20,053 [wrapper] pilotpid: 4094496
[2025-10-13 23:42:26] 2025-10-13 21:32:20,056 [wrapper] Pilot exit status: 0
[2025-10-13 23:42:26] 2025-10-13 21:32:20,071 [wrapper] pandaids: 6839866172 6839866172
[2025-10-13 23:42:26] 2025-10-13 21:32:20,245 [wrapper] cleanup supervisor_pilot  289155 4094497
[2025-10-13 23:42:26] 2025-10-13 21:32:20,250 [wrapper] Test setup, not cleaning
[2025-10-13 23:42:26] 2025-10-13 21:32:20,254 [wrapper] apfmon messages muted
[2025-10-13 23:42:26] 2025-10-13 21:32:20,258 [wrapper] ==== wrapper stdout END ====
[2025-10-13 23:42:26] 2025-10-13 21:32:20,261 [wrapper] ==== wrapper stderr END ====
[2025-10-13 23:42:26]  *** Error codes and diagnostics ***
[2025-10-13 23:42:26]     "exeErrorCode": 0,
[2025-10-13 23:42:26]     "exeErrorDiag": "",
[2025-10-13 23:42:26]     "pilotErrorCode": 0,
[2025-10-13 23:42:26]     "pilotErrorDiag": "",
[2025-10-13 23:42:26]  *** Listing of results directory ***
[2025-10-13 23:42:26] total 620152
[2025-10-13 23:42:26] drwx------ 5 boinc boinc      4096 Oct  7 09:00 pilot3
[2025-10-13 23:42:26] -rw-r--r-- 1 boinc boinc    557409 Oct 12 11:51 pilot3.tar.gz
[2025-10-13 23:42:26] -rw-r--r-- 1 boinc boinc      5112 Oct 12 12:10 queuedata.json
[2025-10-13 23:42:26] -rwx------ 1 boinc boinc     36292 Oct 12 12:11 runpilot2-wrapper.sh
[2025-10-13 23:42:26] -rw-r--r-- 1 boinc boinc       100 Oct 13 19:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 23:42:26] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 19:16 run_atlas
[2025-10-13 23:42:26] -rw-r--r-- 1 boinc boinc       105 Oct 13 19:16 job.xml
[2025-10-13 23:42:26] -rw-r--r-- 3 boinc boinc 219744912 Oct 13 19:16 EVNT.46676267._003612.pool.root.1
[2025-10-13 23:42:26] -rw-r--r-- 3 boinc boinc 219744912 Oct 13 19:16 ATLAS.root_0
[2025-10-13 23:42:26] -rw-r--r-- 2 boinc boinc     15120 Oct 13 19:16 start_atlas.sh
[2025-10-13 23:42:26] drwxrwx--x 2 boinc boinc      4096 Oct 13 19:16 shared
[2025-10-13 23:42:26] -rw-r--r-- 2 boinc boinc    569680 Oct 13 19:16 input.tar.gz
[2025-10-13 23:42:26] -rw-r--r-- 1 boinc boinc         0 Oct 13 19:16 boinc_lockfile
[2025-10-13 23:42:26] -rw-r--r-- 1 boinc boinc      6692 Oct 13 21:02 init_data.xml
[2025-10-13 23:42:26] -rw-r--r-- 1 boinc boinc      2547 Oct 13 21:02 pandaJob.out
[2025-10-13 23:42:26] -rw------- 1 boinc boinc    972799 Oct 13 21:02 agis_schedconf.cvmfs.json
[2025-10-13 23:42:26] -rw------- 1 boinc boinc 188516170 Oct 13 23:31 HITS.46676269._075890.pool.root.1
[2025-10-13 23:42:26] -rw-r--r-- 1 boinc boinc       529 Oct 13 23:31 boinc_task_state.xml
[2025-10-13 23:42:26] -rw------- 1 boinc boinc        97 Oct 13 23:31 pilot_heartbeat.json
[2025-10-13 23:42:26] -rw------- 1 boinc boinc      1039 Oct 13 23:31 memory_monitor_summary.json
[2025-10-13 23:42:26] -rw------- 1 boinc boinc   1560580 Oct 13 23:31 agis_ddmendpoints.agis.ALL.json
[2025-10-13 23:42:26] -rw------- 1 boinc boinc    311143 Oct 13 23:31 log.46676269._075890.job.log.tgz.1
[2025-10-13 23:42:26] -rw------- 1 boinc boinc      7774 Oct 13 23:31 heartbeat.json
[2025-10-13 23:42:26] -rw------- 1 boinc boinc       823 Oct 13 23:32 pilotlog.txt
[2025-10-13 23:42:26] -rw------- 1 boinc boinc   1257405 Oct 13 23:32 log.46676269._075890.job.log.1
[2025-10-13 23:42:26] -rw------- 1 boinc boinc       357 Oct 13 23:32 output.list
[2025-10-13 23:42:26] -rw-r--r-- 1 boinc boinc       620 Oct 13 23:32 runtime_log
[2025-10-13 23:42:26] -rw------- 1 boinc boinc   1587200 Oct 13 23:32 result.tar.gz
[2025-10-13 23:42:26] -rw-r--r-- 1 boinc boinc      9146 Oct 13 23:32 runtime_log.err
[2025-10-13 23:42:26] -rw------- 1 boinc boinc       787 Oct 13 23:32 XxNNDmfE8R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmARjNDmGT5Qmn.diag
[2025-10-13 23:42:26] -rw-r--r-- 1 boinc boinc        26 Oct 13 23:42 wrapper_checkpoint.txt
[2025-10-13 23:42:26] -rw-r--r-- 1 boinc boinc      8192 Oct 13 23:42 boinc_mmap_file
[2025-10-13 23:42:26] -rw-r--r-- 1 boinc boinc     22756 Oct 13 23:42 stderr.txt
[2025-10-13 23:42:26] HITS file was successfully produced:
[2025-10-13 23:42:26] -rw------- 1 boinc boinc 188516170 Oct 13 23:31 shared/HITS.pool.root.1
[2025-10-13 23:42:26]  *** Contents of shared directory: ***
[2025-10-13 23:42:26] total 400828
[2025-10-13 23:42:26] -rw-r--r-- 3 boinc boinc 219744912 Oct 13 19:16 ATLAS.root_0
[2025-10-13 23:42:26] -rw-r--r-- 2 boinc boinc     15120 Oct 13 19:16 start_atlas.sh
[2025-10-13 23:42:26] -rw-r--r-- 2 boinc boinc    569680 Oct 13 19:16 input.tar.gz
[2025-10-13 23:42:26] -rw------- 1 boinc boinc 188516170 Oct 13 23:31 HITS.pool.root.1
[2025-10-13 23:42:26] -rw------- 1 boinc boinc   1587200 Oct 13 23:32 result.tar.gz
23:42:27 (4086887): run_atlas exited; CPU time 34494.189207
23:42:27 (4086887): called boinc_finish(0)

</stderr_txt>
]]>

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