Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:29:15 (13881): wrapper (7.7.26015): starting
11:29:15 (13881): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 11:29:15] Arguments: --nthreads 12
[2025-10-12 11:29:15] Threads: 12
[2025-10-12 11:29:15] Checking for CVMFS
[2025-10-12 11:29:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 11:29:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 11:29:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 11:29:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 11:29:16] 2.11.2.0 2945 223063 98376 151625 1 57 15692833 20275201 1 130560 2 109917576 99.984 13425390 12779 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 11:29:16] CVMFS is ok
[2025-10-12 11:29:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 11:29:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 11:29:16] Further information can be found at the LHC@home message board.
[2025-10-12 11:29:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 11:29:16] Checking for apptainer binary...
[2025-10-12 11:29:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 11:29:16] Running /usr/bin/apptainer --version
[2025-10-12 11:29:16] apptainer version 1.3.2-1.el7
[2025-10-12 11:29:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 11:29:17] c-205-2.aglt2.org
[2025-10-12 11:29:17] apptainer works
[2025-10-12 11:29:17] Set ATHENA_PROC_NUMBER=12
[2025-10-12 11:29:17] Set ATHENA_CORE_NUMBER=12
[2025-10-12 11:29:17] Starting ATLAS job with PandaID=6839865867
[2025-10-12 11:29:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 12:45:00]  *** The last 200 lines of the pilot log: ***
[2025-10-12 12:45:00]  replicas=None
[2025-10-12 12:45:00]  scope=mc23_13p6TeV
[2025-10-12 12:45:00]  status=None
[2025-10-12 12:45:00]  status_code=0
[2025-10-12 12:45:00]  storage_token=
[2025-10-12 12:45:00]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6839865867/log.46676269._075602.job.log.tgz.1
[2025-10-12 12:45:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/34/79/log.46676269._075602.job.log.tgz.1
[2025-10-12 12:45:00]  workdir=None
[2025-10-12 12:45:00] ]
[2025-10-12 12:45:00] 2025-10-12 16:44:19,917 | INFO     | transferring file log.46676269._075602.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6839865867/log.46676269._075602.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 12:45:00] 2025-10-12 16:44:19,917 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6839865867/log.46676269._075602.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._075602.job
[2025-10-12 12:45:00] 2025-10-12 16:44:19,939 | INFO     | adding to output.list: log.46676269._075602.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/34/79/log.46676269._075602.job.log.tg
[2025-10-12 12:45:00] 2025-10-12 16:44:19,940 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 12:45:00] 2025-10-12 16:44:19,940 | INFO     | summary of transferred files:
[2025-10-12 12:45:00] 2025-10-12 16:44:19,940 | INFO     |  -- lfn=log.46676269._075602.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 12:45:00] 2025-10-12 16:44:19,940 | INFO     | stage-out finished correctly
[2025-10-12 12:45:00] 2025-10-12 16:44:21,079 | INFO     | time since job start (4489s) is within the limit (172800.0s)
[2025-10-12 12:45:00] 2025-10-12 16:44:21,430 | INFO     | monitor loop #335: job 0:6839865867 is in state 'finished'
[2025-10-12 12:45:00] 2025-10-12 16:44:21,430 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 12:45:00] 2025-10-12 16:44:22,196 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 12:45:00] 2025-10-12 16:44:23,084 | INFO     | time since job start (4491s) is within the limit (172800.0s)
[2025-10-12 12:45:00] 2025-10-12 16:44:23,347 | INFO     | job 6839865867 has state=finished
[2025-10-12 12:45:00] 2025-10-12 16:44:23,348 | INFO     | preparing for final server update for job 6839865867 in state='finished'
[2025-10-12 12:45:00] 2025-10-12 16:44:23,348 | INFO     | this job has now completed (state=finished)
[2025-10-12 12:45:00] 2025-10-12 16:44:23,349 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 12:45:00] 2025-10-12 16:44:23,349 | INFO     | log transfer has been attempted: DONE
[2025-10-12 12:45:00] 2025-10-12 16:44:23,349 | INFO     | job 6839865867 has finished - writing final server update
[2025-10-12 12:45:00] 2025-10-12 16:44:23,349 | INFO     | total number of processed events: 400 (read)
[2025-10-12 12:45:00] 2025-10-12 16:44:23,350 | INFO     | executing command: lscpu
[2025-10-12 12:45:00] 2025-10-12 16:44:23,376 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 12:45:00] 2025-10-12 16:44:23,933 | INFO     | monitor loop #336: job 0:6839865867 is in state 'finished'
[2025-10-12 12:45:00] 2025-10-12 16:44:23,933 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 12:45:00] 2025-10-12 16:44:25,089 | INFO     | time since job start (4493s) is within the limit (172800.0s)
[2025-10-12 12:45:00] 2025-10-12 16:44:26,436 | INFO     | monitor loop #337: job 0:6839865867 is in state 'finished'
[2025-10-12 12:45:00] 2025-10-12 16:44:26,436 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 12:45:00] 2025-10-12 16:44:27,095 | INFO     | time since job start (4495s) is within the limit (172800.0s)
[2025-10-12 12:45:00] 2025-10-12 16:44:28,452 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 12:45:00] 2025-10-12 16:44:28,456 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-10-12 12:45:00] 2025-10-12 16:44:28,458 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839865867/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 12:45:00] 2025-10-12 16:44:28,459 | INFO     | extracted standard info from prmon json
[2025-10-12 12:45:00] 2025-10-12 16:44:28,459 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 12:45:00] 2025-10-12 16:44:28,459 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 12:45:00] 2025-10-12 16:44:28,460 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 12:45:00] 2025-10-12 16:44:28,460 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 12:45:00] 2025-10-12 16:44:28,461 | INFO     | fitting pss+swap vs Time
[2025-10-12 12:45:00] 2025-10-12 16:44:28,462 | INFO     | sum of square deviations: 93240818.0
[2025-10-12 12:45:00] 2025-10-12 16:44:28,462 | INFO     | sum of deviations: -3798342144.0
[2025-10-12 12:45:00] 2025-10-12 16:44:28,462 | INFO     | mean x: 1760285320.0
[2025-10-12 12:45:00] 2025-10-12 16:44:28,462 | INFO     | mean y: 2907280.7014925373
[2025-10-12 12:45:00] 2025-10-12 16:44:28,462 | INFO     | -- intersect: 71711479339.99559
[2025-10-12 12:45:00] 2025-10-12 16:44:28,462 | INFO     | intersect: 71711479339.99559
[2025-10-12 12:45:00] 2025-10-12 16:44:28,463 | INFO     | chi2: 0.07572227859958111
[2025-10-12 12:45:00] 2025-10-12 16:44:28,463 | INFO     | -- intersect: 71711479339.99559
[2025-10-12 12:45:00] 2025-10-12 16:44:28,463 | INFO     | current memory leak: -40.74 B/s (using 67 data points, chi2=0.08)
[2025-10-12 12:45:00] 2025-10-12 16:44:28,463 | INFO     | could have reported an average CPU frequency of 2047 MHz (6 samples)
[2025-10-12 12:45:00] 2025-10-12 16:44:28,463 | INFO     | ..............................
[2025-10-12 12:45:00] 2025-10-12 16:44:28,464 | INFO     | . Timing measurements:
[2025-10-12 12:45:00] 2025-10-12 16:44:28,464 | INFO     | . get job = 0 s
[2025-10-12 12:45:00] 2025-10-12 16:44:28,464 | INFO     | . initial setup = 2 s
[2025-10-12 12:45:00] 2025-10-12 16:44:28,464 | INFO     | . payload setup = 7 s
[2025-10-12 12:45:00] 2025-10-12 16:44:28,464 | INFO     | . stage-in = 0 s
[2025-10-12 12:45:00] 2025-10-12 16:44:28,464 | INFO     | . payload execution = 4459 s
[2025-10-12 12:45:00] 2025-10-12 16:44:28,464 | INFO     | . stage-out = 0 s
[2025-10-12 12:45:00] 2025-10-12 16:44:28,464 | INFO     | . log creation = 0 s
[2025-10-12 12:45:00] 2025-10-12 16:44:28,464 | INFO     | ..............................
[2025-10-12 12:45:00] 2025-10-12 16:44:28,590 | INFO     | 
[2025-10-12 12:45:00] 2025-10-12 16:44:28,591 | INFO     | job summary report
[2025-10-12 12:45:00] 2025-10-12 16:44:28,591 | INFO     | --------------------------------------------------
[2025-10-12 12:45:00] 2025-10-12 16:44:28,591 | INFO     | PanDA job id: 6839865867
[2025-10-12 12:45:00] 2025-10-12 16:44:28,591 | INFO     | task id: 46676269
[2025-10-12 12:45:00] 2025-10-12 16:44:28,591 | INFO     | errors: (none)
[2025-10-12 12:45:00] 2025-10-12 16:44:28,592 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 12:45:00] 2025-10-12 16:44:28,592 | INFO     | pilot state: finished 
[2025-10-12 12:45:00] 2025-10-12 16:44:28,592 | INFO     | transexitcode: 0
[2025-10-12 12:45:00] 2025-10-12 16:44:28,592 | INFO     | exeerrorcode: 0
[2025-10-12 12:45:00] 2025-10-12 16:44:28,592 | INFO     | exeerrordiag: 
[2025-10-12 12:45:00] 2025-10-12 16:44:28,592 | INFO     | exitcode: 0
[2025-10-12 12:45:00] 2025-10-12 16:44:28,593 | INFO     | exitmsg: OK
[2025-10-12 12:45:00] 2025-10-12 16:44:28,593 | INFO     | cpuconsumptiontime: 47346 s
[2025-10-12 12:45:00] 2025-10-12 16:44:28,593 | INFO     | nevents: 400
[2025-10-12 12:45:00] 2025-10-12 16:44:28,593 | INFO     | neventsw: 0
[2025-10-12 12:45:00] 2025-10-12 16:44:28,593 | INFO     | pid: 24819
[2025-10-12 12:45:00] 2025-10-12 16:44:28,593 | INFO     | pgrp: 24819
[2025-10-12 12:45:00] 2025-10-12 16:44:28,594 | INFO     | corecount: 12
[2025-10-12 12:45:00] 2025-10-12 16:44:28,594 | INFO     | event service: False
[2025-10-12 12:45:00] 2025-10-12 16:44:28,594 | INFO     | sizes: {0: 2348635, 1: 2348834, 6: 2349096, 11: 2349124, 4470: 2375200, 4471: 2384198, 4473: 2384382, 4480: 2384576}
[2025-10-12 12:45:00] 2025-10-12 16:44:28,594 | INFO     | --------------------------------------------------
[2025-10-12 12:45:00] 2025-10-12 16:44:28,594 | INFO     | 
[2025-10-12 12:45:00] 2025-10-12 16:44:28,594 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 12:45:00] 2025-10-12 16:44:28,620 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 12:45:00] 2025-10-12 16:44:28,620 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 12:45:00] 2025-10-12 16:44:28,620 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 12:45:00] 2025-10-12 16:44:28,621 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 12:45:00] 2025-10-12 16:44:28,621 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 12:45:00] 2025-10-12 16:44:28,621 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 12:45:00] 2025-10-12 16:44:28,621 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 12:45:00] 2025-10-12 16:44:28,621 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 12:45:00] 2025-10-12 16:44:28,621 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 12:45:00] 2025-10-12 16:44:28,622 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 12:45:00] 2025-10-12 16:44:28,622 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 12:45:00] 2025-10-12 16:44:28,622 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 12:45:00] 2025-10-12 16:44:28,622 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 12:45:00] 2025-10-12 16:44:28,622 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 12:45:00] 2025-10-12 16:44:28,622 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 12:45:00] 2025-10-12 16:44:28,623 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 12:45:00] 2025-10-12 16:44:28,623 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 12:45:00] 2025-10-12 16:44:28,623 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 12:45:00] 2025-10-12 16:44:28,623 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 12:45:00] 2025-10-12 16:44:28,623 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 12:45:00] 2025-10-12 16:44:28,623 | INFO     | job 6839865867 has completed (purged errors)
[2025-10-12 12:45:00] 2025-10-12 16:44:28,624 | INFO     | overall cleanup function is called
[2025-10-12 12:45:00] 2025-10-12 16:44:29,632 | INFO     | --- collectZombieJob: --- 10, [24819]
[2025-10-12 12:45:00] 2025-10-12 16:44:29,632 | INFO     | zombie collector waiting for pid 24819
[2025-10-12 12:45:00] 2025-10-12 16:44:29,632 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 12:45:00] 2025-10-12 16:44:29,633 | INFO     | collected zombie processes
[2025-10-12 12:45:00] 2025-10-12 16:44:29,633 | INFO     | will attempt to kill all subprocesses of pid=24819
[2025-10-12 12:45:00] 2025-10-12 16:44:29,723 | INFO     | process IDs to be killed: [24819] (in reverse order)
[2025-10-12 12:45:00] 2025-10-12 16:44:29,775 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 12:45:00] 2025-10-12 16:44:29,776 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 12:45:00] 2025-10-12 16:44:29,779 | INFO     | did not find any defunct processes belonging to 24819
[2025-10-12 12:45:00] 2025-10-12 16:44:29,782 | INFO     | did not find any defunct processes belonging to 24819
[2025-10-12 12:45:00] 2025-10-12 16:44:29,782 | INFO     | ready for new job
[2025-10-12 12:45:00] 2025-10-12 16:44:29,782 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 12:45:00] 2025-10-12 16:44:29,783 | INFO     | ***************************************
[2025-10-12 12:45:00] 2025-10-12 16:44:29,783 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 12:45:00] 2025-10-12 16:44:29,783 | INFO     | ***************************************
[2025-10-12 12:45:00] 2025-10-12 16:44:29,783 | INFO     | 
[2025-10-12 12:45:00] 2025-10-12 16:44:29,784 | INFO     | architecture information:
[2025-10-12 12:45:00] 2025-10-12 16:44:29,784 | INFO     | executing command: cat /etc/os-release
[2025-10-12 12:45:00] 2025-10-12 16:44:29,799 | INFO     | cat /etc/os-release:
[2025-10-12 12:45:00] NAME="CentOS Linux"
[2025-10-12 12:45:00] VERSION="7 (Core)"
[2025-10-12 12:45:00] ID="centos"
[2025-10-12 12:45:00] ID_LIKE="rhel fedora"
[2025-10-12 12:45:00] VERSION_ID="7"
[2025-10-12 12:45:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 12:45:00] ANSI_COLOR="0;31"
[2025-10-12 12:45:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 12:45:00] HOME_URL="https://www.centos.org/"
[2025-10-12 12:45:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 12:45:00] 
[2025-10-12 12:45:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 12:45:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 12:45:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 12:45:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 12:45:00] 
[2025-10-12 12:45:00] 2025-10-12 16:44:29,799 | INFO     | ***************************************
[2025-10-12 12:45:00] 2025-10-12 16:44:30,098 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-10-12 12:45:00] 2025-10-12 16:44:30,300 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 12:45:00] 2025-10-12 16:44:30,318 | INFO     | sufficient remaining disk space (29427236864 B)
[2025-10-12 12:45:00] 2025-10-12 16:44:30,319 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 12:45:00] 2025-10-12 16:44:30,319 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 12:45:00] 2025-10-12 16:44:30,319 | INFO     | update_server=False
[2025-10-12 12:45:00] 2025-10-12 16:44:30,319 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 12:45:00] 2025-10-12 16:44:30,319 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:45:00] 2025-10-12 16:44:30,320 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:45:00] 2025-10-12 16:44:30,320 | INFO     | aborting loop
[2025-10-12 12:45:00] 2025-10-12 16:44:30,538 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 12:45:00] 2025-10-12 16:44:31,105 | INFO     | all data control threads have been joined
[2025-10-12 12:45:00] 2025-10-12 16:44:31,325 | INFO     | [job] retrieve thread has finished
[2025-10-12 12:45:00] 2025-10-12 16:44:31,325 | INFO     | [job] queue monitor thread has finished
[2025-10-12 12:45:00] 2025-10-12 16:44:31,326 | INFO     | [job] job monitor thread has finished
[2025-10-12 12:45:00] 2025-10-12 16:44:31,398 | INFO     | [payload] validate_post thread has finished
[2025-10-12 12:45:00] 2025-10-12 16:44:31,431 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 12:45:00] 2025-10-12 16:44:31,612 | INFO     | all payload control threads have been joined
[2025-10-12 12:45:00] 2025-10-12 16:44:31,677 | INFO     | all job control threads have been joined
[2025-10-12 12:45:00] 2025-10-12 16:44:31,680 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 12:45:00] 2025-10-12 16:44:32,002 | INFO     | [data] copytool_in thread has finished
[2025-10-12 12:45:00] 2025-10-12 16:44:32,100 | INFO     | [payload] failed_post thread has finished
[2025-10-12 12:45:00] 2025-10-12 16:44:32,110 | INFO     | [data] control thread has finished
[2025-10-12 12:45:00] 2025-10-12 16:44:32,115 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 12:45:00] 2025-10-12 16:44:32,543 | INFO     | [data] copytool_out thread has finished
[2025-10-12 12:45:00] 2025-10-12 16:44:32,617 | INFO     | [payload] control thread has finished
[2025-10-12 12:45:00] 2025-10-12 16:44:32,683 | INFO     | [job] control thread has finished
[2025-10-12 12:45:00] 2025-10-12 16:44:32,694 | INFO     | [job] validate thread has finished
[2025-10-12 12:45:00] 2025-10-12 16:44:32,696 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 12:45:00] 2025-10-12 16:44:32,786 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 12:45:00] 2025-10-12 16:44:36,792 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 12:45:00] 2025-10-12 16:44:39,310 | INFO     | [monitor] cgroup control has ended
[2025-10-12 12:45:00] 2025-10-12 16:44:40,310 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140361209743168)>', '<ExcThread(monitor, started 140360302966528)>']
[2025-10-12 12:45:00] 2025-10-12 16:44:45,335 | INFO     | all workflow threads have been joined
[2025-10-12 12:45:00] 2025-10-12 16:44:45,335 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 12:45:00] 2025-10-12 16:44:45,338 | INFO     | traces error code: 0
[2025-10-12 12:45:00] 2025-10-12 16:44:45,339 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 12:45:00] 2025-10-12 16:45:00,295 | INFO     | PID=17556 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 12:45:00] 2025-10-12 16:45:00,295 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 12:45:00] 2025-10-12 16:45:00,296 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 12:45:00] 2025-10-12 16:45:00,296 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 12:45:00] 2025-10-12 16:45:00,296 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 12:45:00] 2025-10-12 16:45:00,296 | INFO     | [monitor] control thread has ended
[2025-10-12 12:45:00] 2025-10-12 16:45:00,387 [wrapper] ==== pilot stdout END ====
[2025-10-12 12:45:00] 2025-10-12 16:45:00,391 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 12:45:00] 2025-10-12 16:45:00,395 [wrapper] pilotpid: 17556
[2025-10-12 12:45:00] 2025-10-12 16:45:00,399 [wrapper] Pilot exit status: 0
[2025-10-12 12:45:00] 2025-10-12 16:45:00,413 [wrapper] pandaids: 6839865867
[2025-10-12 12:45:00] 2025-10-12 16:45:00,453 [wrapper] cleanup supervisor_pilot 16271 17557
[2025-10-12 12:45:00] 2025-10-12 16:45:00,457 [wrapper] Test setup, not cleaning
[2025-10-12 12:45:00] 2025-10-12 16:45:00,461 [wrapper] apfmon messages muted
[2025-10-12 12:45:00] 2025-10-12 16:45:00,464 [wrapper] ==== wrapper stdout END ====
[2025-10-12 12:45:00] 2025-10-12 16:45:00,468 [wrapper] ==== wrapper stderr END ====
[2025-10-12 12:45:00]  *** Error codes and diagnostics ***
[2025-10-12 12:45:00]     "exeErrorCode": 0,
[2025-10-12 12:45:00]     "exeErrorDiag": "",
[2025-10-12 12:45:00]     "pilotErrorCode": 0,
[2025-10-12 12:45:00]     "pilotErrorDiag": "",
[2025-10-12 12:45:00]  *** Listing of results directory ***
[2025-10-12 12:45:00] total 415112
[2025-10-12 12:45:00] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 05:51 pilot3.tar.gz
[2025-10-12 12:45:00] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 05:55 queuedata.json
[2025-10-12 12:45:00] -rwx------ 1 boincer umatlas     36292 Oct 12 05:57 runpilot2-wrapper.sh
[2025-10-12 12:45:00] -rw-r--r-- 1 boincer umatlas       100 Oct 12 11:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 12:45:00] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 11:29 run_atlas
[2025-10-12 12:45:00] -rw-r--r-- 1 boincer umatlas       105 Oct 12 11:29 job.xml
[2025-10-12 12:45:00] -rw-r--r-- 2 boincer umatlas 224038172 Oct 12 11:29 EVNT.46676267._003598.pool.root.1
[2025-10-12 12:45:00] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 11:29 start_atlas.sh
[2025-10-12 12:45:00] drwxrwx--x 2 boincer umatlas      4096 Oct 12 11:29 shared
[2025-10-12 12:45:00] -rw-r--r-- 2 boincer umatlas    569676 Oct 12 11:29 input.tar.gz
[2025-10-12 12:45:00] -rw-r--r-- 1 boincer umatlas         0 Oct 12 11:29 boinc_lockfile
[2025-10-12 12:45:00] -rw-r--r-- 1 boincer umatlas      2549 Oct 12 11:29 pandaJob.out
[2025-10-12 12:45:00] -rw------- 1 boincer umatlas    975528 Oct 12 11:29 agis_schedconf.cvmfs.json
[2025-10-12 12:45:00] -rw------- 1 boincer umatlas   1560580 Oct 12 11:29 agis_ddmendpoints.agis.ALL.json
[2025-10-12 12:45:00] drwx------ 5 boincer umatlas      4096 Oct 12 11:29 pilot3
[2025-10-12 12:45:00] -rw-r--r-- 1 boincer umatlas      5951 Oct 12 12:36 init_data.xml
[2025-10-12 12:45:00] -rw------- 1 boincer umatlas 195064386 Oct 12 12:43 HITS.46676269._075602.pool.root.1
[2025-10-12 12:45:00] -rw-r--r-- 1 boincer umatlas       529 Oct 12 12:44 boinc_task_state.xml
[2025-10-12 12:45:00] -rw------- 1 boincer umatlas      1048 Oct 12 12:44 memory_monitor_summary.json
[2025-10-12 12:45:00] -rw------- 1 boincer umatlas    383560 Oct 12 12:44 log.46676269._075602.job.log.tgz.1
[2025-10-12 12:45:00] -rw------- 1 boincer umatlas      7849 Oct 12 12:44 heartbeat.json
[2025-10-12 12:45:00] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 12:44 boinc_mmap_file
[2025-10-12 12:45:00] -rw-r--r-- 1 boincer umatlas        27 Oct 12 12:44 wrapper_checkpoint.txt
[2025-10-12 12:45:00] -rw------- 1 boincer umatlas        95 Oct 12 12:45 pilot_heartbeat.json
[2025-10-12 12:45:00] -rw------- 1 boincer umatlas       745 Oct 12 12:45 pilotlog.txt
[2025-10-12 12:45:00] -rw------- 1 boincer umatlas    651994 Oct 12 12:45 log.46676269._075602.job.log.1
[2025-10-12 12:45:00] -rw------- 1 boincer umatlas       357 Oct 12 12:45 output.list
[2025-10-12 12:45:00] -rw-r--r-- 1 boincer umatlas       620 Oct 12 12:45 runtime_log
[2025-10-12 12:45:00] -rw------- 1 boincer umatlas   1054720 Oct 12 12:45 result.tar.gz
[2025-10-12 12:45:00] -rw-r--r-- 1 boincer umatlas      8700 Oct 12 12:45 runtime_log.err
[2025-10-12 12:45:00] -rw------- 1 boincer umatlas       658 Oct 12 12:45 jOOLDme07R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQOjNDmLxufKo.diag
[2025-10-12 12:45:00] -rw-r--r-- 1 boincer umatlas     21831 Oct 12 12:45 stderr.txt
[2025-10-12 12:45:00] HITS file was successfully produced:
[2025-10-12 12:45:00] -rw------- 1 boincer umatlas 195064386 Oct 12 12:43 shared/HITS.pool.root.1
[2025-10-12 12:45:00]  *** Contents of shared directory: ***
[2025-10-12 12:45:00] total 410896
[2025-10-12 12:45:00] -rw-r--r-- 2 boincer umatlas 224038172 Oct 12 11:29 ATLAS.root_0
[2025-10-12 12:45:00] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 11:29 start_atlas.sh
[2025-10-12 12:45:00] -rw-r--r-- 2 boincer umatlas    569676 Oct 12 11:29 input.tar.gz
[2025-10-12 12:45:00] -rw------- 1 boincer umatlas 195064386 Oct 12 12:43 HITS.pool.root.1
[2025-10-12 12:45:00] -rw------- 1 boincer umatlas   1054720 Oct 12 12:45 result.tar.gz
12:45:01 (13881): run_atlas exited; CPU time 47327.503013
12:45:01 (13881): called boinc_finish(0)

</stderr_txt>
]]>

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