Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:25:52 (31401): wrapper (7.7.26015): starting
11:25:52 (31401): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 11:25:52] Arguments: --nthreads 8
[2025-10-12 11:25:52] Threads: 8
[2025-10-12 11:25:52] Checking for CVMFS
[2025-10-12 11:25:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 11:25:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 11:25:53] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 11:25:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 11:25:53] 2.11.2.0 5524 53062 126868 151625 1 57 12642766 18432001 1833 130560 0 47311898 99.975 2375202 39760 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 11:25:53] CVMFS is ok
[2025-10-12 11:25:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 11:25:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 11:25:53] Further information can be found at the LHC@home message board.
[2025-10-12 11:25:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 11:25:53] Checking for apptainer binary...
[2025-10-12 11:25:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 11:25:53] Running /usr/bin/apptainer --version
[2025-10-12 11:25:53] apptainer version 1.3.2-1.el7
[2025-10-12 11:25:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 11:25:54] c-206-5.aglt2.org
[2025-10-12 11:25:54] apptainer works
[2025-10-12 11:25:54] Set ATHENA_PROC_NUMBER=8
[2025-10-12 11:25:54] Set ATHENA_CORE_NUMBER=8
[2025-10-12 11:25:54] Starting ATLAS job with PandaID=6839928230
[2025-10-12 11:25:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 14:28:29]  *** The last 200 lines of the pilot log: ***
[2025-10-12 14:28:29] 2025-10-12 18:27:47,366 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 14:28:29] 2025-10-12 18:27:47,366 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 14:28:29] 2025-10-12 18:27:47,369 | INFO     | fitting pss+swap vs Time
[2025-10-12 14:28:29] 2025-10-12 18:27:47,369 | INFO     | sum of square deviations: 1778377530.0
[2025-10-12 14:28:29] 2025-10-12 18:27:47,370 | INFO     | sum of deviations: -17056080679.999996
[2025-10-12 14:28:29] 2025-10-12 18:27:47,370 | INFO     | mean x: 1760288219.0
[2025-10-12 14:28:29] 2025-10-12 18:27:47,370 | INFO     | mean y: 2496482.3016759777
[2025-10-12 14:28:29] 2025-10-12 18:27:47,371 | INFO     | -- intersect: 16885086020.709473
[2025-10-12 14:28:29] 2025-10-12 18:27:47,371 | INFO     | intersect: 16885086020.709473
[2025-10-12 14:28:29] 2025-10-12 18:27:47,371 | INFO     | chi2: 2.272358778574283
[2025-10-12 14:28:29] 2025-10-12 18:27:47,371 | INFO     | sum of square deviations: 1633472487.5
[2025-10-12 14:28:29] 2025-10-12 18:27:47,372 | INFO     | sum of deviations: -4277401983.999988
[2025-10-12 14:28:29] 2025-10-12 18:27:47,372 | INFO     | mean x: 1760288066.5
[2025-10-12 14:28:29] 2025-10-12 18:27:47,372 | INFO     | mean y: 2509643.896551724
[2025-10-12 14:28:29] 2025-10-12 18:27:47,372 | INFO     | -- intersect: 4611990198.774035
[2025-10-12 14:28:29] 2025-10-12 18:27:47,372 | INFO     | intersect: 4611990198.774035
[2025-10-12 14:28:29] 2025-10-12 18:27:47,373 | INFO     | chi2: 1.4611354352594734
[2025-10-12 14:28:29] 2025-10-12 18:27:47,373 | INFO     | current chi2=1.4611354352594734 (change=35.69961534964056 %)
[2025-10-12 14:28:29] 2025-10-12 18:27:47,373 | INFO     | sum of square deviations: 1496660620.0
[2025-10-12 14:28:29] 2025-10-12 18:27:47,374 | INFO     | sum of deviations: -3776860383.999998
[2025-10-12 14:28:29] 2025-10-12 18:27:47,374 | INFO     | mean x: 1760287914.0
[2025-10-12 14:28:29] 2025-10-12 18:27:47,374 | INFO     | mean y: 2510201.946745562
[2025-10-12 14:28:29] 2025-10-12 18:27:47,374 | INFO     | -- intersect: 4444640634.175661
[2025-10-12 14:28:29] 2025-10-12 18:27:47,374 | INFO     | intersect: 4444640634.175661
[2025-10-12 14:28:29] 2025-10-12 18:27:47,375 | INFO     | chi2: 1.461468039769452
[2025-10-12 14:28:29] 2025-10-12 18:27:47,375 | INFO     | current chi2=1.461468039769452 (change=-0.02276342780773453 %)
[2025-10-12 14:28:29] 2025-10-12 18:27:47,375 | INFO     | right removable region: 168
[2025-10-12 14:28:29] 2025-10-12 18:27:47,375 | INFO     | sum of square deviations: 1633472487.5
[2025-10-12 14:28:29] 2025-10-12 18:27:47,376 | INFO     | sum of deviations: -42705022221.5
[2025-10-12 14:28:29] 2025-10-12 18:27:47,376 | INFO     | mean x: 1760288371.5
[2025-10-12 14:28:29] 2025-10-12 18:27:47,376 | INFO     | mean y: 2523120.7873563217
[2025-10-12 14:28:29] 2025-10-12 18:27:47,376 | INFO     | -- intersect: 46022982354.97176
[2025-10-12 14:28:29] 2025-10-12 18:27:47,376 | INFO     | intersect: 46022982354.97176
[2025-10-12 14:28:29] 2025-10-12 18:27:47,377 | INFO     | chi2: 0.9122766246467794
[2025-10-12 14:28:29] 2025-10-12 18:27:47,377 | INFO     | current chi2=0.9122766246467794 (change=59.85331923600737 %)
[2025-10-12 14:28:29] 2025-10-12 18:27:47,377 | INFO     | sum of square deviations: 1496660620.0
[2025-10-12 14:28:29] 2025-10-12 18:27:47,378 | INFO     | sum of deviations: -41815560085.0
[2025-10-12 14:28:29] 2025-10-12 18:27:47,378 | INFO     | mean x: 1760288524.0
[2025-10-12 14:28:29] 2025-10-12 18:27:47,378 | INFO     | mean y: 2522070.1124260356
[2025-10-12 14:28:29] 2025-10-12 18:27:47,378 | INFO     | -- intersect: 49183645404.7118
[2025-10-12 14:28:29] 2025-10-12 18:27:47,378 | INFO     | intersect: 49183645404.7118
[2025-10-12 14:28:29] 2025-10-12 18:27:47,378 | INFO     | chi2: 0.8950815106897801
[2025-10-12 14:28:29] 2025-10-12 18:27:47,378 | INFO     | current chi2=0.8950815106897801 (change=1.8848574535883726 %)
[2025-10-12 14:28:29] 2025-10-12 18:27:47,379 | INFO     | left removable region: 20
[2025-10-12 14:28:29] 2025-10-12 18:27:47,379 | INFO     | sum of square deviations: 1005179777.0
[2025-10-12 14:28:29] 2025-10-12 18:27:47,379 | INFO     | sum of deviations: -19006437431.5
[2025-10-12 14:28:29] 2025-10-12 18:27:47,380 | INFO     | mean x: 1760288493.5
[2025-10-12 14:28:29] 2025-10-12 18:27:47,380 | INFO     | mean y: 2526339.6554054054
[2025-10-12 14:28:29] 2025-10-12 18:27:47,380 | INFO     | -- intersect: 33286933645.331978
[2025-10-12 14:28:29] 2025-10-12 18:27:47,380 | INFO     | intersect: 33286933645.331978
[2025-10-12 14:28:29] 2025-10-12 18:27:47,380 | INFO     | chi2: 0.03982037806459301
[2025-10-12 14:28:29] 2025-10-12 18:27:47,380 | INFO     | -- intersect: 33286933645.331978
[2025-10-12 14:28:29] 2025-10-12 18:27:47,380 | INFO     | current memory leak: -18.91 B/s (using 148 data points, chi2=0.04)
[2025-10-12 14:28:29] 2025-10-12 18:27:47,381 | INFO     | could have reported an average CPU frequency of 2558 MHz (9 samples)
[2025-10-12 14:28:29] 2025-10-12 18:27:47,381 | INFO     | ..............................
[2025-10-12 14:28:29] 2025-10-12 18:27:47,381 | INFO     | . Timing measurements:
[2025-10-12 14:28:29] 2025-10-12 18:27:47,381 | INFO     | . get job = 0 s
[2025-10-12 14:28:29] 2025-10-12 18:27:47,381 | INFO     | . initial setup = 2 s
[2025-10-12 14:28:29] 2025-10-12 18:27:47,381 | INFO     | . payload setup = 5 s
[2025-10-12 14:28:29] 2025-10-12 18:27:47,381 | INFO     | . stage-in = 0 s
[2025-10-12 14:28:29] 2025-10-12 18:27:47,381 | INFO     | . payload execution = 10865 s
[2025-10-12 14:28:29] 2025-10-12 18:27:47,381 | INFO     | . stage-out = 2 s
[2025-10-12 14:28:29] 2025-10-12 18:27:47,382 | INFO     | . log creation = 0 s
[2025-10-12 14:28:29] 2025-10-12 18:27:47,382 | INFO     | ..............................
[2025-10-12 14:28:29] 2025-10-12 18:27:47,477 | INFO     | 
[2025-10-12 14:28:29] 2025-10-12 18:27:47,477 | INFO     | job summary report
[2025-10-12 14:28:29] 2025-10-12 18:27:47,477 | INFO     | --------------------------------------------------
[2025-10-12 14:28:29] 2025-10-12 18:27:47,477 | INFO     | PanDA job id: 6839928230
[2025-10-12 14:28:29] 2025-10-12 18:27:47,478 | INFO     | task id: 46676269
[2025-10-12 14:28:29] 2025-10-12 18:27:47,478 | INFO     | errors: (none)
[2025-10-12 14:28:29] 2025-10-12 18:27:47,478 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 14:28:29] 2025-10-12 18:27:47,478 | INFO     | pilot state: finished 
[2025-10-12 14:28:29] 2025-10-12 18:27:47,478 | INFO     | transexitcode: 0
[2025-10-12 14:28:29] 2025-10-12 18:27:47,478 | INFO     | exeerrorcode: 0
[2025-10-12 14:28:29] 2025-10-12 18:27:47,479 | INFO     | exeerrordiag: 
[2025-10-12 14:28:29] 2025-10-12 18:27:47,479 | INFO     | exitcode: 0
[2025-10-12 14:28:29] 2025-10-12 18:27:47,479 | INFO     | exitmsg: OK
[2025-10-12 14:28:29] 2025-10-12 18:27:47,479 | INFO     | cpuconsumptiontime: 81858 s
[2025-10-12 14:28:29] 2025-10-12 18:27:47,479 | INFO     | nevents: 400
[2025-10-12 14:28:29] 2025-10-12 18:27:47,479 | INFO     | neventsw: 0
[2025-10-12 14:28:29] 2025-10-12 18:27:47,480 | INFO     | pid: 9257
[2025-10-12 14:28:29] 2025-10-12 18:27:47,480 | INFO     | pgrp: 9257
[2025-10-12 14:28:29] 2025-10-12 18:27:47,480 | INFO     | corecount: 8
[2025-10-12 14:28:29] 2025-10-12 18:27:47,480 | INFO     | event service: False
[2025-10-12 14:28:29] 2025-10-12 18:27:47,480 | INFO     | sizes: {0: 2348029, 1: 2348885, 4: 2349147, 12: 2349175, 10874: 2378276, 10875: 2378275, 10878: 2387457, 10882: 2387513, 10888: 2387771}
[2025-10-12 14:28:29] 2025-10-12 18:27:47,480 | INFO     | --------------------------------------------------
[2025-10-12 14:28:29] 2025-10-12 18:27:47,480 | INFO     | 
[2025-10-12 14:28:29] 2025-10-12 18:27:47,481 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 14:28:29] 2025-10-12 18:27:47,497 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 14:28:29] 2025-10-12 18:27:47,498 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 14:28:29] 2025-10-12 18:27:47,498 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 14:28:29] 2025-10-12 18:27:47,498 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 14:28:29] 2025-10-12 18:27:47,498 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 14:28:29] 2025-10-12 18:27:47,498 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 14:28:29] 2025-10-12 18:27:47,498 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 14:28:29] 2025-10-12 18:27:47,499 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 14:28:29] 2025-10-12 18:27:47,499 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 14:28:29] 2025-10-12 18:27:47,499 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 14:28:29] 2025-10-12 18:27:47,499 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 14:28:29] 2025-10-12 18:27:47,499 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 14:28:29] 2025-10-12 18:27:47,500 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 14:28:29] 2025-10-12 18:27:47,500 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 14:28:29] 2025-10-12 18:27:47,500 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 14:28:29] 2025-10-12 18:27:47,500 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 14:28:29] 2025-10-12 18:27:47,500 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 14:28:29] 2025-10-12 18:27:47,500 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 14:28:29] 2025-10-12 18:27:47,501 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 14:28:29] 2025-10-12 18:27:47,501 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 14:28:29] 2025-10-12 18:27:47,501 | INFO     | job 6839928230 has completed (purged errors)
[2025-10-12 14:28:29] 2025-10-12 18:27:47,501 | INFO     | overall cleanup function is called
[2025-10-12 14:28:29] 2025-10-12 18:27:48,509 | INFO     | --- collectZombieJob: --- 10, [9257]
[2025-10-12 14:28:29] 2025-10-12 18:27:48,509 | INFO     | zombie collector waiting for pid 9257
[2025-10-12 14:28:29] 2025-10-12 18:27:48,509 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 14:28:29] 2025-10-12 18:27:48,509 | INFO     | collected zombie processes
[2025-10-12 14:28:29] 2025-10-12 18:27:48,509 | INFO     | will attempt to kill all subprocesses of pid=9257
[2025-10-12 14:28:29] 2025-10-12 18:27:48,667 | INFO     | process IDs to be killed: [9257] (in reverse order)
[2025-10-12 14:28:29] 2025-10-12 18:27:48,724 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 14:28:29] 2025-10-12 18:27:48,724 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 14:28:29] 2025-10-12 18:27:48,729 | INFO     | did not find any defunct processes belonging to 9257
[2025-10-12 14:28:29] 2025-10-12 18:27:48,734 | INFO     | did not find any defunct processes belonging to 9257
[2025-10-12 14:28:29] 2025-10-12 18:27:48,734 | INFO     | ready for new job
[2025-10-12 14:28:29] 2025-10-12 18:27:48,734 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 14:28:29] 2025-10-12 18:27:48,736 | INFO     | ***************************************
[2025-10-12 14:28:29] 2025-10-12 18:27:48,736 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 14:28:29] 2025-10-12 18:27:48,737 | INFO     | ***************************************
[2025-10-12 14:28:29] 2025-10-12 18:27:48,737 | INFO     | 
[2025-10-12 14:28:29] 2025-10-12 18:27:48,738 | INFO     | architecture information:
[2025-10-12 14:28:29] 2025-10-12 18:27:48,738 | INFO     | executing command: cat /etc/os-release
[2025-10-12 14:28:29] 2025-10-12 18:27:48,751 | INFO     | cat /etc/os-release:
[2025-10-12 14:28:29] NAME="CentOS Linux"
[2025-10-12 14:28:29] VERSION="7 (Core)"
[2025-10-12 14:28:29] ID="centos"
[2025-10-12 14:28:29] ID_LIKE="rhel fedora"
[2025-10-12 14:28:29] VERSION_ID="7"
[2025-10-12 14:28:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 14:28:29] ANSI_COLOR="0;31"
[2025-10-12 14:28:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 14:28:29] HOME_URL="https://www.centos.org/"
[2025-10-12 14:28:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 14:28:29] 
[2025-10-12 14:28:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 14:28:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 14:28:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 14:28:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 14:28:29] 
[2025-10-12 14:28:29] 2025-10-12 18:27:48,751 | INFO     | ***************************************
[2025-10-12 14:28:29] 2025-10-12 18:27:49,254 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 14:28:29] 2025-10-12 18:27:49,324 | INFO     | sufficient remaining disk space (28115468288 B)
[2025-10-12 14:28:29] 2025-10-12 18:27:49,324 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 14:28:29] 2025-10-12 18:27:49,325 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 14:28:29] 2025-10-12 18:27:49,325 | INFO     | update_server=False
[2025-10-12 14:28:29] 2025-10-12 18:27:49,325 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 14:28:29] 2025-10-12 18:27:49,325 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:28:29] 2025-10-12 18:27:49,325 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 14:28:29] 2025-10-12 18:27:49,325 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:28:29] 2025-10-12 18:27:49,326 | INFO     | aborting loop
[2025-10-12 14:28:29] 2025-10-12 18:27:49,686 | INFO     | all payload control threads have been joined
[2025-10-12 14:28:29] 2025-10-12 18:27:49,810 | INFO     | all job control threads have been joined
[2025-10-12 14:28:29] 2025-10-12 18:27:50,279 | INFO     | all data control threads have been joined
[2025-10-12 14:28:29] 2025-10-12 18:27:50,330 | INFO     | [job] retrieve thread has finished
[2025-10-12 14:28:29] 2025-10-12 18:27:50,331 | INFO     | [job] queue monitor thread has finished
[2025-10-12 14:28:29] 2025-10-12 18:27:50,331 | INFO     | [job] job monitor thread has finished
[2025-10-12 14:28:29] 2025-10-12 18:27:50,346 | INFO     | [job] validate thread has finished
[2025-10-12 14:28:29] 2025-10-12 18:27:50,458 | INFO     | [payload] failed_post thread has finished
[2025-10-12 14:28:29] 2025-10-12 18:27:50,690 | INFO     | [payload] control thread has finished
[2025-10-12 14:28:29] 2025-10-12 18:27:50,719 | INFO     | [data] copytool_in thread has finished
[2025-10-12 14:28:29] 2025-10-12 18:27:50,812 | INFO     | [job] control thread has finished
[2025-10-12 14:28:29] 2025-10-12 18:27:51,284 | INFO     | [data] control thread has finished
[2025-10-12 14:28:29] 2025-10-12 18:27:51,331 | INFO     | [data] copytool_out thread has finished
[2025-10-12 14:28:29] 2025-10-12 18:27:51,670 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 14:28:29] 2025-10-12 18:27:51,768 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 14:28:29] 2025-10-12 18:27:51,783 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 14:28:29] 2025-10-12 18:27:51,819 | INFO     | [payload] validate_post thread has finished
[2025-10-12 14:28:29] 2025-10-12 18:27:52,151 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 14:28:29] 2025-10-12 18:27:56,157 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 14:28:29] 2025-10-12 18:28:00,337 | INFO     | job.realtimelogging is not enabled
[2025-10-12 14:28:29] 2025-10-12 18:28:01,344 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 14:28:29] 2025-10-12 18:28:19,491 | INFO     | PID=2728 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 14:28:29] 2025-10-12 18:28:19,491 | INFO     | .. there are 3 such processes running
[2025-10-12 14:28:29] 2025-10-12 18:28:19,492 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 14:28:29] 2025-10-12 18:28:19,492 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 14:28:29] 2025-10-12 18:28:19,492 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 14:28:29] 2025-10-12 18:28:22,585 | INFO     | [monitor] cgroup control has ended
[2025-10-12 14:28:29] 2025-10-12 18:28:23,745 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139974333306688)>', '<ExcThread(monitor, started 139973890127616)>']
[2025-10-12 14:28:29] 2025-10-12 18:28:24,517 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 14:28:29] 2025-10-12 18:28:24,517 | INFO     | [monitor] control thread has ended
[2025-10-12 14:28:29] 2025-10-12 18:28:28,770 | INFO     | all workflow threads have been joined
[2025-10-12 14:28:29] 2025-10-12 18:28:28,770 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 14:28:29] 2025-10-12 18:28:28,770 | INFO     | traces error code: 0
[2025-10-12 14:28:29] 2025-10-12 18:28:28,775 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 14:28:29] 2025-10-12 18:28:28,900 [wrapper] ==== pilot stdout END ====
[2025-10-12 14:28:29] 2025-10-12 18:28:28,903 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 14:28:29] 2025-10-12 18:28:28,905 [wrapper] pilotpid: 2728
[2025-10-12 14:28:29] 2025-10-12 18:28:28,909 [wrapper] Pilot exit status: 0
[2025-10-12 14:28:29] 2025-10-12 18:28:28,921 [wrapper] pandaids: 6839928230
[2025-10-12 14:28:29] 2025-10-12 18:28:28,972 [wrapper] cleanup supervisor_pilot 32418 2729
[2025-10-12 14:28:29] 2025-10-12 18:28:28,974 [wrapper] Test setup, not cleaning
[2025-10-12 14:28:29] 2025-10-12 18:28:28,976 [wrapper] apfmon messages muted
[2025-10-12 14:28:29] 2025-10-12 18:28:28,980 [wrapper] ==== wrapper stdout END ====
[2025-10-12 14:28:29] 2025-10-12 18:28:28,986 [wrapper] ==== wrapper stderr END ====
[2025-10-12 14:28:29]  *** Error codes and diagnostics ***
[2025-10-12 14:28:29]     "exeErrorCode": 0,
[2025-10-12 14:28:29]     "exeErrorDiag": "",
[2025-10-12 14:28:29]     "pilotErrorCode": 0,
[2025-10-12 14:28:29]     "pilotErrorDiag": "",
[2025-10-12 14:28:29]  *** Listing of results directory ***
[2025-10-12 14:28:29] total 412016
[2025-10-12 14:28:29] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 07:54 pilot3.tar.gz
[2025-10-12 14:28:29] -rwx------ 1 boincer umatlas     36292 Oct 12 08:05 runpilot2-wrapper.sh
[2025-10-12 14:28:29] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 08:05 queuedata.json
[2025-10-12 14:28:29] -rw-r--r-- 1 boincer umatlas       100 Oct 12 11:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 14:28:29] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 11:25 run_atlas
[2025-10-12 14:28:29] -rw-r--r-- 1 boincer umatlas       105 Oct 12 11:25 job.xml
[2025-10-12 14:28:29] -rw-r--r-- 2 boincer umatlas 222216150 Oct 12 11:25 EVNT.46676267._003721.pool.root.1
[2025-10-12 14:28:29] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 11:25 start_atlas.sh
[2025-10-12 14:28:29] drwxrwx--x 2 boincer umatlas      4096 Oct 12 11:25 shared
[2025-10-12 14:28:29] -rw-r--r-- 2 boincer umatlas    569677 Oct 12 11:25 input.tar.gz
[2025-10-12 14:28:29] -rw-r--r-- 1 boincer umatlas         0 Oct 12 11:25 boinc_lockfile
[2025-10-12 14:28:29] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 11:25 pandaJob.out
[2025-10-12 14:28:29] -rw------- 1 boincer umatlas    975528 Oct 12 11:26 agis_schedconf.cvmfs.json
[2025-10-12 14:28:29] drwx------ 5 boincer umatlas      4096 Oct 12 11:26 pilot3
[2025-10-12 14:28:29] -rw-r--r-- 1 boincer umatlas      5952 Oct 12 14:20 init_data.xml
[2025-10-12 14:28:29] -rw------- 1 boincer umatlas 191888545 Oct 12 14:27 HITS.46676269._077669.pool.root.1
[2025-10-12 14:28:29] -rw-r--r-- 1 boincer umatlas       530 Oct 12 14:27 boinc_task_state.xml
[2025-10-12 14:28:29] -rw------- 1 boincer umatlas      1054 Oct 12 14:27 memory_monitor_summary.json
[2025-10-12 14:28:29] -rw------- 1 boincer umatlas   1560580 Oct 12 14:27 agis_ddmendpoints.agis.ALL.json
[2025-10-12 14:28:29] -rw------- 1 boincer umatlas    421975 Oct 12 14:27 log.46676269._077669.job.log.tgz.1
[2025-10-12 14:28:29] -rw------- 1 boincer umatlas      7859 Oct 12 14:27 heartbeat.json
[2025-10-12 14:28:29] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 14:28 boinc_mmap_file
[2025-10-12 14:28:29] -rw-r--r-- 1 boincer umatlas        28 Oct 12 14:28 wrapper_checkpoint.txt
[2025-10-12 14:28:29] -rw------- 1 boincer umatlas        95 Oct 12 14:28 pilot_heartbeat.json
[2025-10-12 14:28:29] -rw------- 1 boincer umatlas      4892 Oct 12 14:28 pilotlog.txt
[2025-10-12 14:28:29] -rw------- 1 boincer umatlas   1526679 Oct 12 14:28 log.46676269._077669.job.log.1
[2025-10-12 14:28:29] -rw------- 1 boincer umatlas       357 Oct 12 14:28 output.list
[2025-10-12 14:28:29] -rw-r--r-- 1 boincer umatlas       620 Oct 12 14:28 runtime_log
[2025-10-12 14:28:29] -rw------- 1 boincer umatlas   1966080 Oct 12 14:28 result.tar.gz
[2025-10-12 14:28:29] -rw-r--r-- 1 boincer umatlas      8699 Oct 12 14:28 runtime_log.err
[2025-10-12 14:28:29] -rw------- 1 boincer umatlas       661 Oct 12 14:28 e8qLDmz09R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmRpTMDm0TMp9n.diag
[2025-10-12 14:28:29] -rw-r--r-- 1 boincer umatlas     20867 Oct 12 14:28 stderr.txt
[2025-10-12 14:28:29] HITS file was successfully produced:
[2025-10-12 14:28:29] -rw------- 1 boincer umatlas 191888545 Oct 12 14:27 shared/HITS.pool.root.1
[2025-10-12 14:28:29]  *** Contents of shared directory: ***
[2025-10-12 14:28:29] total 406904
[2025-10-12 14:28:29] -rw-r--r-- 2 boincer umatlas 222216150 Oct 12 11:25 ATLAS.root_0
[2025-10-12 14:28:29] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 11:25 start_atlas.sh
[2025-10-12 14:28:29] -rw-r--r-- 2 boincer umatlas    569677 Oct 12 11:25 input.tar.gz
[2025-10-12 14:28:29] -rw------- 1 boincer umatlas 191888545 Oct 12 14:27 HITS.pool.root.1
[2025-10-12 14:28:29] -rw------- 1 boincer umatlas   1966080 Oct 12 14:28 result.tar.gz
14:28:30 (31401): run_atlas exited; CPU time 81994.465657
14:28:30 (31401): called boinc_finish(0)

</stderr_txt>
]]>

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