Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:25:28 (18806): wrapper (7.7.26015): starting
11:25:28 (18806): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 11:25:28] Arguments: --nthreads 8
[2025-10-12 11:25:28] Threads: 8
[2025-10-12 11:25:28] Checking for CVMFS
[2025-10-12 11:25:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 11:25:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 11:25:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 11:25:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 11:25:28] 2.11.2.0 2895 8677 75312 151625 0 56 12493854 20275200 1 130560 0 5405632 99.988 294731 35145 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 11:25:28] CVMFS is ok
[2025-10-12 11:25:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 11:25:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 11:25:28] Further information can be found at the LHC@home message board.
[2025-10-12 11:25:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 11:25:28] Checking for apptainer binary...
[2025-10-12 11:25:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 11:25:28] Running /usr/bin/apptainer --version
[2025-10-12 11:25:28] apptainer version 1.3.2-1.el7
[2025-10-12 11:25:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 11:25:30] c-204-7.aglt2.org
[2025-10-12 11:25:30] apptainer works
[2025-10-12 11:25:30] Set ATHENA_PROC_NUMBER=8
[2025-10-12 11:25:30] Set ATHENA_CORE_NUMBER=8
[2025-10-12 11:25:30] Starting ATLAS job with PandaID=6839774914
[2025-10-12 11:25:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 13:33:06]  *** The last 200 lines of the pilot log: ***
[2025-10-12 13:33:06] 2025-10-12 17:32:20,854 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 13:33:06] 2025-10-12 17:32:20,854 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 13:33:06] 2025-10-12 17:32:20,856 | INFO     | fitting pss+swap vs Time
[2025-10-12 13:33:06] 2025-10-12 17:32:20,857 | INFO     | sum of square deviations: 591173875.0
[2025-10-12 13:33:06] 2025-10-12 17:32:20,857 | INFO     | sum of deviations: -8182758806.999997
[2025-10-12 13:33:06] 2025-10-12 17:32:20,857 | INFO     | mean x: 1760286529.5
[2025-10-12 13:33:06] 2025-10-12 17:32:20,858 | INFO     | mean y: 2624550.1129032257
[2025-10-12 13:33:06] 2025-10-12 17:32:20,858 | INFO     | -- intersect: 24367706823.259
[2025-10-12 13:33:06] 2025-10-12 17:32:20,858 | INFO     | intersect: 24367706823.259
[2025-10-12 13:33:06] 2025-10-12 17:32:20,858 | INFO     | chi2: 1.6352540710247427
[2025-10-12 13:33:06] 2025-10-12 17:32:20,859 | INFO     | sum of square deviations: 522502820.0
[2025-10-12 13:33:06] 2025-10-12 17:32:20,859 | INFO     | sum of deviations: -6557395933.999999
[2025-10-12 13:33:06] 2025-10-12 17:32:20,859 | INFO     | mean x: 1760286377.0
[2025-10-12 13:33:06] 2025-10-12 17:32:20,859 | INFO     | mean y: 2628161.5966386553
[2025-10-12 13:33:06] 2025-10-12 17:32:20,860 | INFO     | -- intersect: 22094173488.022606
[2025-10-12 13:33:06] 2025-10-12 17:32:20,860 | INFO     | intersect: 22094173488.022606
[2025-10-12 13:33:06] 2025-10-12 17:32:20,860 | INFO     | chi2: 1.6374099750660698
[2025-10-12 13:33:06] 2025-10-12 17:32:20,860 | INFO     | current chi2=1.6374099750660698 (change=-0.13183908724202276 %)
[2025-10-12 13:33:06] 2025-10-12 17:32:20,860 | INFO     | right removable region: 118
[2025-10-12 13:33:06] 2025-10-12 17:32:20,861 | INFO     | sum of square deviations: 522502820.0
[2025-10-12 13:33:06] 2025-10-12 17:32:20,861 | INFO     | sum of deviations: -27975485842.0
[2025-10-12 13:33:06] 2025-10-12 17:32:20,861 | INFO     | mean x: 1760286682.0
[2025-10-12 13:33:06] 2025-10-12 17:32:20,861 | INFO     | mean y: 2667749.705882353
[2025-10-12 13:33:06] 2025-10-12 17:32:20,862 | INFO     | -- intersect: 94250723961.44492
[2025-10-12 13:33:06] 2025-10-12 17:32:20,862 | INFO     | intersect: 94250723961.44492
[2025-10-12 13:33:06] 2025-10-12 17:32:20,862 | INFO     | chi2: 0.12328918876475738
[2025-10-12 13:33:06] 2025-10-12 17:32:20,862 | INFO     | current chi2=0.12328918876475738 (change=92.4605484279579 %)
[2025-10-12 13:33:06] 2025-10-12 17:32:20,862 | INFO     | sum of square deviations: 459366752.5
[2025-10-12 13:33:06] 2025-10-12 17:32:20,863 | INFO     | sum of deviations: -27668019154.499992
[2025-10-12 13:33:06] 2025-10-12 17:32:20,863 | INFO     | mean x: 1760286834.5
[2025-10-12 13:33:06] 2025-10-12 17:32:20,863 | INFO     | mean y: 2666903.763157895
[2025-10-12 13:33:06] 2025-10-12 17:32:20,863 | INFO     | -- intersect: 106026121124.82187
[2025-10-12 13:33:06] 2025-10-12 17:32:20,864 | INFO     | intersect: 106026121124.82187
[2025-10-12 13:33:06] 2025-10-12 17:32:20,864 | INFO     | chi2: 0.09243005243200249
[2025-10-12 13:33:06] 2025-10-12 17:32:20,864 | INFO     | current chi2=0.09243005243200249 (change=25.029880269255266 %)
[2025-10-12 13:33:06] 2025-10-12 17:32:20,864 | INFO     | sum of square deviations: 401533110.0
[2025-10-12 13:33:06] 2025-10-12 17:32:20,865 | INFO     | sum of deviations: -25472379207.0
[2025-10-12 13:33:06] 2025-10-12 17:32:20,865 | INFO     | mean x: 1760286987.0
[2025-10-12 13:33:06] 2025-10-12 17:32:20,865 | INFO     | mean y: 2661096.651376147
[2025-10-12 13:33:06] 2025-10-12 17:32:20,865 | INFO     | -- intersect: 111671404045.4246
[2025-10-12 13:33:06] 2025-10-12 17:32:20,865 | INFO     | intersect: 111671404045.4246
[2025-10-12 13:33:06] 2025-10-12 17:32:20,866 | INFO     | chi2: 0.08831620489640504
[2025-10-12 13:33:06] 2025-10-12 17:32:20,866 | INFO     | current chi2=0.08831620489640504 (change=4.450768367381222 %)
[2025-10-12 13:33:06] 2025-10-12 17:32:20,866 | INFO     | left removable region: 30
[2025-10-12 13:33:06] 2025-10-12 17:32:20,866 | INFO     | sum of square deviations: 211285822.0
[2025-10-12 13:33:06] 2025-10-12 17:32:20,867 | INFO     | sum of deviations: -16070969384.500002
[2025-10-12 13:33:06] 2025-10-12 17:32:20,867 | INFO     | mean x: 1760287261.5
[2025-10-12 13:33:06] 2025-10-12 17:32:20,867 | INFO     | mean y: 2643004.034090909
[2025-10-12 13:33:06] 2025-10-12 17:32:20,867 | INFO     | -- intersect: 133894838986.27017
[2025-10-12 13:33:06] 2025-10-12 17:32:20,867 | INFO     | intersect: 133894838986.27017
[2025-10-12 13:33:06] 2025-10-12 17:32:20,867 | INFO     | chi2: 0.07672975299500207
[2025-10-12 13:33:06] 2025-10-12 17:32:20,868 | INFO     | -- intersect: 133894838986.27017
[2025-10-12 13:33:06] 2025-10-12 17:32:20,868 | INFO     | current memory leak: -76.06 B/s (using 88 data points, chi2=0.08)
[2025-10-12 13:33:06] 2025-10-12 17:32:20,868 | INFO     | could have reported an average CPU frequency of 1958 MHz (8 samples)
[2025-10-12 13:33:06] 2025-10-12 17:32:20,868 | INFO     | ..............................
[2025-10-12 13:33:06] 2025-10-12 17:32:20,868 | INFO     | . Timing measurements:
[2025-10-12 13:33:06] 2025-10-12 17:32:20,868 | INFO     | . get job = 0 s
[2025-10-12 13:33:06] 2025-10-12 17:32:20,869 | INFO     | . initial setup = 3 s
[2025-10-12 13:33:06] 2025-10-12 17:32:20,869 | INFO     | . payload setup = 8 s
[2025-10-12 13:33:06] 2025-10-12 17:32:20,869 | INFO     | . stage-in = 0 s
[2025-10-12 13:33:06] 2025-10-12 17:32:20,869 | INFO     | . payload execution = 7556 s
[2025-10-12 13:33:06] 2025-10-12 17:32:20,869 | INFO     | . stage-out = 1 s
[2025-10-12 13:33:06] 2025-10-12 17:32:20,869 | INFO     | . log creation = 0 s
[2025-10-12 13:33:06] 2025-10-12 17:32:20,869 | INFO     | ..............................
[2025-10-12 13:33:06] 2025-10-12 17:32:20,970 | INFO     | 
[2025-10-12 13:33:06] 2025-10-12 17:32:20,970 | INFO     | job summary report
[2025-10-12 13:33:06] 2025-10-12 17:32:20,970 | INFO     | --------------------------------------------------
[2025-10-12 13:33:06] 2025-10-12 17:32:20,970 | INFO     | PanDA job id: 6839774914
[2025-10-12 13:33:06] 2025-10-12 17:32:20,971 | INFO     | task id: 46676269
[2025-10-12 13:33:06] 2025-10-12 17:32:20,971 | INFO     | errors: (none)
[2025-10-12 13:33:06] 2025-10-12 17:32:20,971 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 13:33:06] 2025-10-12 17:32:20,971 | INFO     | pilot state: finished 
[2025-10-12 13:33:06] 2025-10-12 17:32:20,971 | INFO     | transexitcode: 0
[2025-10-12 13:33:06] 2025-10-12 17:32:20,971 | INFO     | exeerrorcode: 0
[2025-10-12 13:33:06] 2025-10-12 17:32:20,971 | INFO     | exeerrordiag: 
[2025-10-12 13:33:06] 2025-10-12 17:32:20,971 | INFO     | exitcode: 0
[2025-10-12 13:33:06] 2025-10-12 17:32:20,972 | INFO     | exitmsg: OK
[2025-10-12 13:33:06] 2025-10-12 17:32:20,972 | INFO     | cpuconsumptiontime: 56575 s
[2025-10-12 13:33:06] 2025-10-12 17:32:20,972 | INFO     | nevents: 400
[2025-10-12 13:33:06] 2025-10-12 17:32:20,972 | INFO     | neventsw: 0
[2025-10-12 13:33:06] 2025-10-12 17:32:20,972 | INFO     | pid: 28969
[2025-10-12 13:33:06] 2025-10-12 17:32:20,972 | INFO     | pgrp: 28969
[2025-10-12 13:33:06] 2025-10-12 17:32:20,972 | INFO     | corecount: 8
[2025-10-12 13:33:06] 2025-10-12 17:32:20,972 | INFO     | event service: False
[2025-10-12 13:33:06] 2025-10-12 17:32:20,973 | INFO     | sizes: {0: 2348686, 1: 2348885, 6: 2349147, 11: 2349175, 7567: 2376721, 7568: 2376720, 7570: 2385958, 7576: 2386096}
[2025-10-12 13:33:06] 2025-10-12 17:32:20,973 | INFO     | --------------------------------------------------
[2025-10-12 13:33:06] 2025-10-12 17:32:20,973 | INFO     | 
[2025-10-12 13:33:06] 2025-10-12 17:32:20,973 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 13:33:06] 2025-10-12 17:32:21,002 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 13:33:06] 2025-10-12 17:32:21,002 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 13:33:06] 2025-10-12 17:32:21,003 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 13:33:06] 2025-10-12 17:32:21,003 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 13:33:06] 2025-10-12 17:32:21,003 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 13:33:06] 2025-10-12 17:32:21,003 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 13:33:06] 2025-10-12 17:32:21,003 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 13:33:06] 2025-10-12 17:32:21,003 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 13:33:06] 2025-10-12 17:32:21,003 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 13:33:06] 2025-10-12 17:32:21,003 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 13:33:06] 2025-10-12 17:32:21,004 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 13:33:06] 2025-10-12 17:32:21,004 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 13:33:06] 2025-10-12 17:32:21,004 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 13:33:06] 2025-10-12 17:32:21,004 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 13:33:06] 2025-10-12 17:32:21,004 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 13:33:06] 2025-10-12 17:32:21,004 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 13:33:06] 2025-10-12 17:32:21,004 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 13:33:06] 2025-10-12 17:32:21,005 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 13:33:06] 2025-10-12 17:32:21,005 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 13:33:06] 2025-10-12 17:32:21,005 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 13:33:06] 2025-10-12 17:32:21,005 | INFO     | job 6839774914 has completed (purged errors)
[2025-10-12 13:33:06] 2025-10-12 17:32:21,005 | INFO     | overall cleanup function is called
[2025-10-12 13:33:06] 2025-10-12 17:32:22,013 | INFO     | --- collectZombieJob: --- 10, [28969]
[2025-10-12 13:33:06] 2025-10-12 17:32:22,013 | INFO     | zombie collector waiting for pid 28969
[2025-10-12 13:33:06] 2025-10-12 17:32:22,013 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 13:33:06] 2025-10-12 17:32:22,013 | INFO     | collected zombie processes
[2025-10-12 13:33:06] 2025-10-12 17:32:22,013 | INFO     | will attempt to kill all subprocesses of pid=28969
[2025-10-12 13:33:06] 2025-10-12 17:32:22,109 | INFO     | process IDs to be killed: [28969] (in reverse order)
[2025-10-12 13:33:06] 2025-10-12 17:32:22,168 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 13:33:06] 2025-10-12 17:32:22,169 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 13:33:06] 2025-10-12 17:32:22,172 | INFO     | did not find any defunct processes belonging to 28969
[2025-10-12 13:33:06] 2025-10-12 17:32:22,175 | INFO     | did not find any defunct processes belonging to 28969
[2025-10-12 13:33:06] 2025-10-12 17:32:22,175 | INFO     | ready for new job
[2025-10-12 13:33:06] 2025-10-12 17:32:22,175 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 13:33:06] 2025-10-12 17:32:22,177 | INFO     | ***************************************
[2025-10-12 13:33:06] 2025-10-12 17:32:22,177 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 13:33:06] 2025-10-12 17:32:22,177 | INFO     | ***************************************
[2025-10-12 13:33:06] 2025-10-12 17:32:22,177 | INFO     | 
[2025-10-12 13:33:06] 2025-10-12 17:32:22,178 | INFO     | architecture information:
[2025-10-12 13:33:06] 2025-10-12 17:32:22,178 | INFO     | executing command: cat /etc/os-release
[2025-10-12 13:33:06] 2025-10-12 17:32:22,195 | INFO     | cat /etc/os-release:
[2025-10-12 13:33:06] NAME="CentOS Linux"
[2025-10-12 13:33:06] VERSION="7 (Core)"
[2025-10-12 13:33:06] ID="centos"
[2025-10-12 13:33:06] ID_LIKE="rhel fedora"
[2025-10-12 13:33:06] VERSION_ID="7"
[2025-10-12 13:33:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 13:33:06] ANSI_COLOR="0;31"
[2025-10-12 13:33:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 13:33:06] HOME_URL="https://www.centos.org/"
[2025-10-12 13:33:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 13:33:06] 
[2025-10-12 13:33:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 13:33:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 13:33:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 13:33:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 13:33:06] 
[2025-10-12 13:33:06] 2025-10-12 17:32:22,196 | INFO     | ***************************************
[2025-10-12 13:33:06] 2025-10-12 17:32:22,698 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 13:33:06] 2025-10-12 17:32:22,717 | INFO     | sufficient remaining disk space (18571329536 B)
[2025-10-12 13:33:06] 2025-10-12 17:32:22,718 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 13:33:06] 2025-10-12 17:32:22,718 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 13:33:06] 2025-10-12 17:32:22,718 | INFO     | update_server=False
[2025-10-12 13:33:06] 2025-10-12 17:32:22,718 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 13:33:06] 2025-10-12 17:32:22,718 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:33:06] 2025-10-12 17:32:22,719 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 13:33:06] 2025-10-12 17:32:22,892 | INFO     | all payload control threads have been joined
[2025-10-12 13:33:06] 2025-10-12 17:32:23,092 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 13:33:06] 2025-10-12 17:32:23,092 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 13:33:06] 2025-10-12 17:32:23,092 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:33:06] 2025-10-12 17:32:23,092 | INFO     | will abort loop
[2025-10-12 13:33:06] 2025-10-12 17:32:23,228 | INFO     | all data control threads have been joined
[2025-10-12 13:33:06] 2025-10-12 17:32:23,392 | INFO     | all job control threads have been joined
[2025-10-12 13:33:06] 2025-10-12 17:32:23,723 | INFO     | [job] retrieve thread has finished
[2025-10-12 13:33:06] 2025-10-12 17:32:23,724 | INFO     | [job] queue monitor thread has finished
[2025-10-12 13:33:06] 2025-10-12 17:32:23,819 | INFO     | [job] validate thread has finished
[2025-10-12 13:33:06] 2025-10-12 17:32:23,897 | INFO     | [payload] control thread has finished
[2025-10-12 13:33:06] 2025-10-12 17:32:23,943 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 13:33:06] 2025-10-12 17:32:24,097 | INFO     | [job] job monitor thread has finished
[2025-10-12 13:33:06] 2025-10-12 17:32:24,234 | INFO     | [data] control thread has finished
[2025-10-12 13:33:06] 2025-10-12 17:32:24,397 | INFO     | [job] control thread has finished
[2025-10-12 13:33:06] 2025-10-12 17:32:24,724 | INFO     | [data] copytool_out thread has finished
[2025-10-12 13:33:06] 2025-10-12 17:32:24,741 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 13:33:06] 2025-10-12 17:32:24,742 | INFO     | [payload] validate_post thread has finished
[2025-10-12 13:33:06] 2025-10-12 17:32:24,765 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 13:33:06] 2025-10-12 17:32:24,768 | INFO     | [data] copytool_in thread has finished
[2025-10-12 13:33:06] 2025-10-12 17:32:24,816 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 13:33:06] 2025-10-12 17:32:25,210 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 13:33:06] 2025-10-12 17:32:25,325 | INFO     | [payload] failed_post thread has finished
[2025-10-12 13:33:06] 2025-10-12 17:32:29,211 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 13:33:06] 2025-10-12 17:32:53,821 | INFO     | PID=22477 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 13:33:06] 2025-10-12 17:32:53,822 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 13:33:06] 2025-10-12 17:32:53,822 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 13:33:06] 2025-10-12 17:32:53,823 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 13:33:06] 2025-10-12 17:32:59,687 | INFO     | [monitor] cgroup control has ended
[2025-10-12 13:33:06] 2025-10-12 17:33:00,635 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140215106647872)>', '<ExcThread(monitor, started 140214282471168)>']
[2025-10-12 13:33:06] 2025-10-12 17:33:00,854 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 13:33:06] 2025-10-12 17:33:00,854 | INFO     | [monitor] control thread has ended
[2025-10-12 13:33:06] 2025-10-12 17:33:05,647 | INFO     | all workflow threads have been joined
[2025-10-12 13:33:06] 2025-10-12 17:33:05,647 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 13:33:06] 2025-10-12 17:33:05,648 | INFO     | traces error code: 0
[2025-10-12 13:33:06] 2025-10-12 17:33:05,650 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 13:33:06] 2025-10-12 17:33:05,782 [wrapper] ==== pilot stdout END ====
[2025-10-12 13:33:06] 2025-10-12 17:33:05,786 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 13:33:06] 2025-10-12 17:33:05,790 [wrapper] pilotpid: 22477
[2025-10-12 13:33:06] 2025-10-12 17:33:05,795 [wrapper] Pilot exit status: 0
[2025-10-12 13:33:06] 2025-10-12 17:33:05,813 [wrapper] pandaids: 6839774914
[2025-10-12 13:33:06] 2025-10-12 17:33:05,860 [wrapper] cleanup supervisor_pilot 19706 22478
[2025-10-12 13:33:06] 2025-10-12 17:33:05,865 [wrapper] Test setup, not cleaning
[2025-10-12 13:33:06] 2025-10-12 17:33:05,869 [wrapper] apfmon messages muted
[2025-10-12 13:33:06] 2025-10-12 17:33:05,873 [wrapper] ==== wrapper stdout END ====
[2025-10-12 13:33:06] 2025-10-12 17:33:05,878 [wrapper] ==== wrapper stderr END ====
[2025-10-12 13:33:06]  *** Error codes and diagnostics ***
[2025-10-12 13:33:06]     "exeErrorCode": 0,
[2025-10-12 13:33:06]     "exeErrorDiag": "",
[2025-10-12 13:33:06]     "pilotErrorCode": 0,
[2025-10-12 13:33:06]     "pilotErrorDiag": "",
[2025-10-12 13:33:06]  *** Listing of results directory ***
[2025-10-12 13:33:06] total 418608
[2025-10-12 13:33:06] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 04:37 pilot3.tar.gz
[2025-10-12 13:33:06] -rwx------ 1 boincer umatlas     36292 Oct 12 04:43 runpilot2-wrapper.sh
[2025-10-12 13:33:06] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 04:43 queuedata.json
[2025-10-12 13:33:06] -rw-r--r-- 1 boincer umatlas       100 Oct 12 11:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 13:33:06] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 11:25 run_atlas
[2025-10-12 13:33:06] -rw-r--r-- 1 boincer umatlas       105 Oct 12 11:25 job.xml
[2025-10-12 13:33:06] -rw-r--r-- 2 boincer umatlas 225221455 Oct 12 11:25 EVNT.46676267._003548.pool.root.1
[2025-10-12 13:33:06] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 11:25 start_atlas.sh
[2025-10-12 13:33:06] drwxrwx--x 2 boincer umatlas      4096 Oct 12 11:25 shared
[2025-10-12 13:33:06] -rw-r--r-- 2 boincer umatlas    569678 Oct 12 11:25 input.tar.gz
[2025-10-12 13:33:06] -rw-r--r-- 1 boincer umatlas         0 Oct 12 11:25 boinc_lockfile
[2025-10-12 13:33:06] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 11:25 pandaJob.out
[2025-10-12 13:33:06] -rw------- 1 boincer umatlas    975528 Oct 12 11:25 agis_schedconf.cvmfs.json
[2025-10-12 13:33:06] -rw------- 1 boincer umatlas   1560580 Oct 12 11:25 agis_ddmendpoints.agis.ALL.json
[2025-10-12 13:33:06] drwx------ 5 boincer umatlas      4096 Oct 12 11:25 pilot3
[2025-10-12 13:33:06] -rw-r--r-- 1 boincer umatlas      5909 Oct 12 13:29 init_data.xml
[2025-10-12 13:33:06] -rw------- 1 boincer umatlas 196658898 Oct 12 13:31 HITS.46676269._074660.pool.root.1
[2025-10-12 13:33:06] -rw-r--r-- 1 boincer umatlas       529 Oct 12 13:31 boinc_task_state.xml
[2025-10-12 13:33:06] -rw------- 1 boincer umatlas      1050 Oct 12 13:32 memory_monitor_summary.json
[2025-10-12 13:33:06] -rw------- 1 boincer umatlas    367459 Oct 12 13:32 log.46676269._074660.job.log.tgz.1
[2025-10-12 13:33:06] -rw------- 1 boincer umatlas      7847 Oct 12 13:32 heartbeat.json
[2025-10-12 13:33:06] -rw------- 1 boincer umatlas        95 Oct 12 13:32 pilot_heartbeat.json
[2025-10-12 13:33:06] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 13:33 boinc_mmap_file
[2025-10-12 13:33:06] -rw-r--r-- 1 boincer umatlas        27 Oct 12 13:33 wrapper_checkpoint.txt
[2025-10-12 13:33:06] -rw------- 1 boincer umatlas      4932 Oct 12 13:33 pilotlog.txt
[2025-10-12 13:33:06] -rw------- 1 boincer umatlas   1069386 Oct 12 13:33 log.46676269._074660.job.log.1
[2025-10-12 13:33:06] -rw------- 1 boincer umatlas       357 Oct 12 13:33 output.list
[2025-10-12 13:33:06] -rw-r--r-- 1 boincer umatlas       620 Oct 12 13:33 runtime_log
[2025-10-12 13:33:06] -rw------- 1 boincer umatlas   1454080 Oct 12 13:33 result.tar.gz
[2025-10-12 13:33:06] -rw-r--r-- 1 boincer umatlas      8698 Oct 12 13:33 runtime_log.err
[2025-10-12 13:33:06] -rw------- 1 boincer umatlas       658 Oct 12 13:33 9a0LDmwq6R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmWWTMDm3023pm.diag
[2025-10-12 13:33:06] -rw-r--r-- 1 boincer umatlas     20892 Oct 12 13:33 stderr.txt
[2025-10-12 13:33:06] HITS file was successfully produced:
[2025-10-12 13:33:06] -rw------- 1 boincer umatlas 196658898 Oct 12 13:31 shared/HITS.pool.root.1
[2025-10-12 13:33:06]  *** Contents of shared directory: ***
[2025-10-12 13:33:06] total 413996
[2025-10-12 13:33:06] -rw-r--r-- 2 boincer umatlas 225221455 Oct 12 11:25 ATLAS.root_0
[2025-10-12 13:33:06] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 11:25 start_atlas.sh
[2025-10-12 13:33:06] -rw-r--r-- 2 boincer umatlas    569678 Oct 12 11:25 input.tar.gz
[2025-10-12 13:33:06] -rw------- 1 boincer umatlas 196658898 Oct 12 13:31 HITS.pool.root.1
[2025-10-12 13:33:06] -rw------- 1 boincer umatlas   1454080 Oct 12 13:33 result.tar.gz
13:33:07 (18806): run_atlas exited; CPU time 56591.720498
13:33:07 (18806): called boinc_finish(0)

</stderr_txt>
]]>

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