Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:27:10 (4868): wrapper (7.7.26015): starting
11:27:10 (4868): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 11:27:10] Arguments: --nthreads 8
[2025-10-12 11:27:10] Threads: 8
[2025-10-12 11:27:10] Checking for CVMFS
[2025-10-12 11:27:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 11:27:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 11:27:11] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 11:27:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 11:27:11] 2.11.2.0 8814 53040 113396 151625 2 188 18211061 18432001 1833 130560 0 47938962 99.973 2391692 39937 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 11:27:11] CVMFS is ok
[2025-10-12 11:27:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 11:27:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 11:27:11] Further information can be found at the LHC@home message board.
[2025-10-12 11:27:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 11:27:11] Checking for apptainer binary...
[2025-10-12 11:27:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 11:27:11] Running /usr/bin/apptainer --version
[2025-10-12 11:27:11] apptainer version 1.3.2-1.el7
[2025-10-12 11:27:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 11:27:12] c-206-19.aglt2.org
[2025-10-12 11:27:12] apptainer works
[2025-10-12 11:27:12] Set ATHENA_PROC_NUMBER=8
[2025-10-12 11:27:12] Set ATHENA_CORE_NUMBER=8
[2025-10-12 11:27:12] Starting ATLAS job with PandaID=6839987802
[2025-10-12 11:27:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 14:26:46]  *** The last 200 lines of the pilot log: ***
[2025-10-12 14:26:46] 2025-10-12 18:25:46,969 | INFO     | fitting pss+swap vs Time
[2025-10-12 14:26:46] 2025-10-12 18:25:46,969 | INFO     | sum of square deviations: 1661798600.0
[2025-10-12 14:26:46] 2025-10-12 18:25:46,970 | INFO     | sum of deviations: 8380934448.000005
[2025-10-12 14:26:46] 2025-10-12 18:25:46,970 | INFO     | mean x: 1760288175.0
[2025-10-12 14:26:46] 2025-10-12 18:25:46,970 | INFO     | mean y: 2501594.4
[2025-10-12 14:26:46] 2025-10-12 18:25:46,970 | INFO     | -- intersect: -8875144471.895014
[2025-10-12 14:26:46] 2025-10-12 18:25:46,971 | INFO     | intersect: -8875144471.895014
[2025-10-12 14:26:46] 2025-10-12 18:25:46,971 | INFO     | chi2: 1.551827372837584
[2025-10-12 14:26:46] 2025-10-12 18:25:46,971 | INFO     | sum of square deviations: 1523386702.5
[2025-10-12 14:26:46] 2025-10-12 18:25:46,972 | INFO     | sum of deviations: 8482576795.999997
[2025-10-12 14:26:46] 2025-10-12 18:25:46,972 | INFO     | mean x: 1760288022.5
[2025-10-12 14:26:46] 2025-10-12 18:25:46,972 | INFO     | mean y: 2501706.905882353
[2025-10-12 14:26:46] 2025-10-12 18:25:46,972 | INFO     | -- intersect: -9799197565.794197
[2025-10-12 14:26:46] 2025-10-12 18:25:46,972 | INFO     | intersect: -9799197565.794197
[2025-10-12 14:26:46] 2025-10-12 18:25:46,973 | INFO     | chi2: 1.5530846681816428
[2025-10-12 14:26:46] 2025-10-12 18:25:46,973 | INFO     | current chi2=1.5530846681816428 (change=-0.08102030973714618 %)
[2025-10-12 14:26:46] 2025-10-12 18:25:46,973 | INFO     | right removable region: 169
[2025-10-12 14:26:46] 2025-10-12 18:25:46,973 | INFO     | sum of square deviations: 1523386702.5
[2025-10-12 14:26:46] 2025-10-12 18:25:46,974 | INFO     | sum of deviations: -19777940452.0
[2025-10-12 14:26:46] 2025-10-12 18:25:46,974 | INFO     | mean x: 1760288327.5
[2025-10-12 14:26:46] 2025-10-12 18:25:46,974 | INFO     | mean y: 2532265.4588235295
[2025-10-12 14:26:46] 2025-10-12 18:25:46,974 | INFO     | -- intersect: 22856137106.902996
[2025-10-12 14:26:46] 2025-10-12 18:25:46,974 | INFO     | intersect: 22856137106.902996
[2025-10-12 14:26:46] 2025-10-12 18:25:46,975 | INFO     | chi2: 0.05774106103133649
[2025-10-12 14:26:46] 2025-10-12 18:25:46,975 | INFO     | current chi2=0.05774106103133649 (change=96.27915694477315 %)
[2025-10-12 14:26:46] 2025-10-12 18:25:46,975 | INFO     | sum of square deviations: 1392881930.0
[2025-10-12 14:26:46] 2025-10-12 18:25:46,976 | INFO     | sum of deviations: -20947216207.0
[2025-10-12 14:26:46] 2025-10-12 18:25:46,976 | INFO     | mean x: 1760288480.0
[2025-10-12 14:26:46] 2025-10-12 18:25:46,976 | INFO     | mean y: 2533585.993939394
[2025-10-12 14:26:46] 2025-10-12 18:25:46,976 | INFO     | -- intersect: 26475088497.558765
[2025-10-12 14:26:46] 2025-10-12 18:25:46,976 | INFO     | intersect: 26475088497.558765
[2025-10-12 14:26:46] 2025-10-12 18:25:46,976 | INFO     | chi2: 0.037620910338278274
[2025-10-12 14:26:46] 2025-10-12 18:25:46,976 | INFO     | current chi2=0.037620910338278274 (change=34.845481419433675 %)
[2025-10-12 14:26:46] 2025-10-12 18:25:46,977 | INFO     | sum of square deviations: 1270051720.0
[2025-10-12 14:26:46] 2025-10-12 18:25:46,977 | INFO     | sum of deviations: -19550966954.999996
[2025-10-12 14:26:46] 2025-10-12 18:25:46,978 | INFO     | mean x: 1760288632.5
[2025-10-12 14:26:46] 2025-10-12 18:25:46,978 | INFO     | mean y: 2531846.15
[2025-10-12 14:26:46] 2025-10-12 18:25:46,978 | INFO     | -- intersect: 27100125072.723194
[2025-10-12 14:26:46] 2025-10-12 18:25:46,978 | INFO     | intersect: 27100125072.723194
[2025-10-12 14:26:46] 2025-10-12 18:25:46,978 | INFO     | chi2: 0.0372494186264841
[2025-10-12 14:26:46] 2025-10-12 18:25:46,978 | INFO     | current chi2=0.0372494186264841 (change=0.9874607191952792 %)
[2025-10-12 14:26:46] 2025-10-12 18:25:46,978 | INFO     | left removable region: 30
[2025-10-12 14:26:46] 2025-10-12 18:25:46,979 | INFO     | sum of square deviations: 832722590.0
[2025-10-12 14:26:46] 2025-10-12 18:25:46,979 | INFO     | sum of deviations: -13075401056.999998
[2025-10-12 14:26:46] 2025-10-12 18:25:46,979 | INFO     | mean x: 1760288907.0
[2025-10-12 14:26:46] 2025-10-12 18:25:46,979 | INFO     | mean y: 2524768.4244604316
[2025-10-12 14:26:46] 2025-10-12 18:25:46,980 | INFO     | -- intersect: 27642562052.88575
[2025-10-12 14:26:46] 2025-10-12 18:25:46,980 | INFO     | intersect: 27642562052.88575
[2025-10-12 14:26:46] 2025-10-12 18:25:46,980 | INFO     | chi2: 0.03525772091979284
[2025-10-12 14:26:46] 2025-10-12 18:25:46,980 | INFO     | -- intersect: 27642562052.88575
[2025-10-12 14:26:46] 2025-10-12 18:25:46,980 | INFO     | current memory leak: -15.70 B/s (using 139 data points, chi2=0.04)
[2025-10-12 14:26:46] 2025-10-12 18:25:46,981 | INFO     | could have reported an average CPU frequency of 2530 MHz (9 samples)
[2025-10-12 14:26:46] 2025-10-12 18:25:46,981 | INFO     | ..............................
[2025-10-12 14:26:46] 2025-10-12 18:25:46,981 | INFO     | . Timing measurements:
[2025-10-12 14:26:46] 2025-10-12 18:25:46,981 | INFO     | . get job = 0 s
[2025-10-12 14:26:46] 2025-10-12 18:25:46,981 | INFO     | . initial setup = 2 s
[2025-10-12 14:26:46] 2025-10-12 18:25:46,981 | INFO     | . payload setup = 4 s
[2025-10-12 14:26:46] 2025-10-12 18:25:46,981 | INFO     | . stage-in = 0 s
[2025-10-12 14:26:46] 2025-10-12 18:25:46,981 | INFO     | . payload execution = 10676 s
[2025-10-12 14:26:46] 2025-10-12 18:25:46,982 | INFO     | . stage-out = 0 s
[2025-10-12 14:26:46] 2025-10-12 18:25:46,982 | INFO     | . log creation = 0 s
[2025-10-12 14:26:46] 2025-10-12 18:25:46,982 | INFO     | ..............................
[2025-10-12 14:26:46] 2025-10-12 18:25:47,098 | INFO     | 
[2025-10-12 14:26:46] 2025-10-12 18:25:47,099 | INFO     | job summary report
[2025-10-12 14:26:46] 2025-10-12 18:25:47,099 | INFO     | --------------------------------------------------
[2025-10-12 14:26:46] 2025-10-12 18:25:47,099 | INFO     | PanDA job id: 6839987802
[2025-10-12 14:26:46] 2025-10-12 18:25:47,099 | INFO     | task id: 46676269
[2025-10-12 14:26:46] 2025-10-12 18:25:47,099 | INFO     | errors: (none)
[2025-10-12 14:26:46] 2025-10-12 18:25:47,099 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 14:26:46] 2025-10-12 18:25:47,099 | INFO     | pilot state: finished 
[2025-10-12 14:26:46] 2025-10-12 18:25:47,099 | INFO     | transexitcode: 0
[2025-10-12 14:26:46] 2025-10-12 18:25:47,099 | INFO     | exeerrorcode: 0
[2025-10-12 14:26:46] 2025-10-12 18:25:47,099 | INFO     | exeerrordiag: 
[2025-10-12 14:26:46] 2025-10-12 18:25:47,100 | INFO     | exitcode: 0
[2025-10-12 14:26:46] 2025-10-12 18:25:47,100 | INFO     | exitmsg: OK
[2025-10-12 14:26:46] 2025-10-12 18:25:47,100 | INFO     | cpuconsumptiontime: 81350 s
[2025-10-12 14:26:46] 2025-10-12 18:25:47,100 | INFO     | nevents: 400
[2025-10-12 14:26:46] 2025-10-12 18:25:47,100 | INFO     | neventsw: 0
[2025-10-12 14:26:46] 2025-10-12 18:25:47,100 | INFO     | pid: 14980
[2025-10-12 14:26:46] 2025-10-12 18:25:47,100 | INFO     | pgrp: 14980
[2025-10-12 14:26:46] 2025-10-12 18:25:47,100 | INFO     | corecount: 8
[2025-10-12 14:26:46] 2025-10-12 18:25:47,100 | INFO     | event service: False
[2025-10-12 14:26:46] 2025-10-12 18:25:47,100 | INFO     | sizes: {0: 2348580, 1: 2348835, 2: 2348835, 5: 2349125, 12: 2349181, 10684: 2378195, 10685: 2387249, 10688: 2387451}
[2025-10-12 14:26:46] 2025-10-12 18:25:47,101 | INFO     | --------------------------------------------------
[2025-10-12 14:26:46] 2025-10-12 18:25:47,101 | INFO     | 
[2025-10-12 14:26:46] 2025-10-12 18:25:47,101 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 14:26:46] 2025-10-12 18:25:47,113 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 14:26:46] 2025-10-12 18:25:47,114 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 14:26:46] 2025-10-12 18:25:47,114 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 14:26:46] 2025-10-12 18:25:47,114 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 14:26:46] 2025-10-12 18:25:47,114 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 14:26:46] 2025-10-12 18:25:47,114 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 14:26:46] 2025-10-12 18:25:47,115 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 14:26:46] 2025-10-12 18:25:47,115 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 14:26:46] 2025-10-12 18:25:47,115 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 14:26:46] 2025-10-12 18:25:47,115 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 14:26:46] 2025-10-12 18:25:47,115 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 14:26:46] 2025-10-12 18:25:47,115 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 14:26:46] 2025-10-12 18:25:47,116 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 14:26:46] 2025-10-12 18:25:47,116 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 14:26:46] 2025-10-12 18:25:47,116 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 14:26:46] 2025-10-12 18:25:47,116 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 14:26:46] 2025-10-12 18:25:47,116 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 14:26:46] 2025-10-12 18:25:47,116 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 14:26:46] 2025-10-12 18:25:47,116 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 14:26:46] 2025-10-12 18:25:47,117 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 14:26:46] 2025-10-12 18:25:47,117 | INFO     | job 6839987802 has completed (purged errors)
[2025-10-12 14:26:46] 2025-10-12 18:25:47,117 | INFO     | overall cleanup function is called
[2025-10-12 14:26:46] 2025-10-12 18:25:48,125 | INFO     | --- collectZombieJob: --- 10, [14980]
[2025-10-12 14:26:46] 2025-10-12 18:25:48,125 | INFO     | zombie collector waiting for pid 14980
[2025-10-12 14:26:46] 2025-10-12 18:25:48,125 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 14:26:46] 2025-10-12 18:25:48,125 | INFO     | collected zombie processes
[2025-10-12 14:26:46] 2025-10-12 18:25:48,125 | INFO     | will attempt to kill all subprocesses of pid=14980
[2025-10-12 14:26:46] 2025-10-12 18:25:48,232 | INFO     | process IDs to be killed: [14980] (in reverse order)
[2025-10-12 14:26:46] 2025-10-12 18:25:48,283 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 14:26:46] 2025-10-12 18:25:48,284 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 14:26:46] 2025-10-12 18:25:48,288 | INFO     | did not find any defunct processes belonging to 14980
[2025-10-12 14:26:46] 2025-10-12 18:25:48,291 | INFO     | did not find any defunct processes belonging to 14980
[2025-10-12 14:26:46] 2025-10-12 18:25:48,292 | INFO     | ready for new job
[2025-10-12 14:26:46] 2025-10-12 18:25:48,292 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 14:26:46] 2025-10-12 18:25:48,294 | INFO     | ***************************************
[2025-10-12 14:26:46] 2025-10-12 18:25:48,294 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 14:26:46] 2025-10-12 18:25:48,294 | INFO     | ***************************************
[2025-10-12 14:26:46] 2025-10-12 18:25:48,294 | INFO     | 
[2025-10-12 14:26:46] 2025-10-12 18:25:48,295 | INFO     | architecture information:
[2025-10-12 14:26:46] 2025-10-12 18:25:48,296 | INFO     | executing command: cat /etc/os-release
[2025-10-12 14:26:46] 2025-10-12 18:25:48,307 | INFO     | cat /etc/os-release:
[2025-10-12 14:26:46] NAME="CentOS Linux"
[2025-10-12 14:26:46] VERSION="7 (Core)"
[2025-10-12 14:26:46] ID="centos"
[2025-10-12 14:26:46] ID_LIKE="rhel fedora"
[2025-10-12 14:26:46] VERSION_ID="7"
[2025-10-12 14:26:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 14:26:46] ANSI_COLOR="0;31"
[2025-10-12 14:26:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 14:26:46] HOME_URL="https://www.centos.org/"
[2025-10-12 14:26:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 14:26:46] 
[2025-10-12 14:26:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 14:26:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 14:26:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 14:26:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 14:26:46] 
[2025-10-12 14:26:46] 2025-10-12 18:25:48,308 | INFO     | ***************************************
[2025-10-12 14:26:46] 2025-10-12 18:25:48,811 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 14:26:46] 2025-10-12 18:25:48,822 | INFO     | sufficient remaining disk space (27844935680 B)
[2025-10-12 14:26:46] 2025-10-12 18:25:48,822 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 14:26:46] 2025-10-12 18:25:48,822 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 14:26:46] 2025-10-12 18:25:48,822 | INFO     | update_server=False
[2025-10-12 14:26:46] 2025-10-12 18:25:48,822 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 14:26:46] 2025-10-12 18:25:48,823 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:26:46] 2025-10-12 18:25:48,990 | INFO     | all job control threads have been joined
[2025-10-12 14:26:46] 2025-10-12 18:25:49,152 | INFO     | all payload control threads have been joined
[2025-10-12 14:26:46] 2025-10-12 18:25:49,289 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 14:26:46] 2025-10-12 18:25:49,289 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 14:26:46] 2025-10-12 18:25:49,289 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:26:46] 2025-10-12 18:25:49,290 | INFO     | will abort loop
[2025-10-12 14:26:46] 2025-10-12 18:25:49,341 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 14:26:46] 2025-10-12 18:25:49,828 | INFO     | [job] retrieve thread has finished
[2025-10-12 14:26:46] 2025-10-12 18:25:49,828 | INFO     | [job] queue monitor thread has finished
[2025-10-12 14:26:46] 2025-10-12 18:25:49,840 | INFO     | [payload] failed_post thread has finished
[2025-10-12 14:26:46] 2025-10-12 18:25:49,853 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 14:26:46] 2025-10-12 18:25:49,898 | INFO     | all data control threads have been joined
[2025-10-12 14:26:46] 2025-10-12 18:25:49,913 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 14:26:46] 2025-10-12 18:25:49,995 | INFO     | [job] control thread has finished
[2025-10-12 14:26:46] 2025-10-12 18:25:50,134 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 14:26:46] 2025-10-12 18:25:50,157 | INFO     | [payload] control thread has finished
[2025-10-12 14:26:46] 2025-10-12 18:25:50,218 | INFO     | [payload] validate_post thread has finished
[2025-10-12 14:26:46] 2025-10-12 18:25:50,295 | INFO     | [job] job monitor thread has finished
[2025-10-12 14:26:46] 2025-10-12 18:25:50,703 | INFO     | [job] validate thread has finished
[2025-10-12 14:26:46] 2025-10-12 18:25:50,802 | INFO     | [data] copytool_in thread has finished
[2025-10-12 14:26:46] 2025-10-12 18:25:50,902 | INFO     | [data] control thread has finished
[2025-10-12 14:26:46] 2025-10-12 18:25:51,178 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 14:26:46] 2025-10-12 18:25:51,347 | INFO     | [data] copytool_out thread has finished
[2025-10-12 14:26:46] 2025-10-12 18:25:53,918 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 14:26:46] 2025-10-12 18:25:59,662 | INFO     | job.realtimelogging is not enabled
[2025-10-12 14:26:46] 2025-10-12 18:26:00,665 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 14:26:46] 2025-10-12 18:26:18,343 | INFO     | PID=8562 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 14:26:46] 2025-10-12 18:26:18,343 | INFO     | .. there are 3 such processes running
[2025-10-12 14:26:46] 2025-10-12 18:26:18,344 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 14:26:46] 2025-10-12 18:26:18,344 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 14:26:46] 2025-10-12 18:26:18,344 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 14:26:46] 2025-10-12 18:26:40,054 | INFO     | [monitor] cgroup control has ended
[2025-10-12 14:26:46] 2025-10-12 18:26:40,741 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139944496887616)>', '<ExcThread(monitor, started 139943917643520)>']
[2025-10-12 14:26:46] 2025-10-12 18:26:41,444 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 14:26:46] 2025-10-12 18:26:41,444 | INFO     | [monitor] control thread has ended
[2025-10-12 14:26:46] 2025-10-12 18:26:45,767 | INFO     | all workflow threads have been joined
[2025-10-12 14:26:46] 2025-10-12 18:26:45,767 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 14:26:46] 2025-10-12 18:26:45,767 | INFO     | traces error code: 0
[2025-10-12 14:26:46] 2025-10-12 18:26:45,768 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 14:26:46] 2025-10-12 18:26:45,867 [wrapper] ==== pilot stdout END ====
[2025-10-12 14:26:46] 2025-10-12 18:26:45,870 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 14:26:46] 2025-10-12 18:26:45,872 [wrapper] pilotpid: 8562
[2025-10-12 14:26:46] 2025-10-12 18:26:45,874 [wrapper] Pilot exit status: 0
[2025-10-12 14:26:46] 2025-10-12 18:26:45,883 [wrapper] pandaids: 6839987802
[2025-10-12 14:26:46] 2025-10-12 18:26:45,910 [wrapper] cleanup supervisor_pilot 20151 8563
[2025-10-12 14:26:46] 2025-10-12 18:26:45,913 [wrapper] Test setup, not cleaning
[2025-10-12 14:26:46] 2025-10-12 18:26:45,916 [wrapper] apfmon messages muted
[2025-10-12 14:26:46] 2025-10-12 18:26:45,918 [wrapper] ==== wrapper stdout END ====
[2025-10-12 14:26:46] 2025-10-12 18:26:45,920 [wrapper] ==== wrapper stderr END ====
[2025-10-12 14:26:46]  *** Error codes and diagnostics ***
[2025-10-12 14:26:46]     "exeErrorCode": 0,
[2025-10-12 14:26:46]     "exeErrorDiag": "",
[2025-10-12 14:26:46]     "pilotErrorCode": 0,
[2025-10-12 14:26:46]     "pilotErrorDiag": "",
[2025-10-12 14:26:46]  *** Listing of results directory ***
[2025-10-12 14:26:46] total 408168
[2025-10-12 14:26:46] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 08:10 pilot3.tar.gz
[2025-10-12 14:26:46] -rwx------ 1 boincer umatlas     36292 Oct 12 08:29 runpilot2-wrapper.sh
[2025-10-12 14:26:46] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 08:29 queuedata.json
[2025-10-12 14:26:46] -rw-r--r-- 1 boincer umatlas       100 Oct 12 11:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 14:26:46] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 11:27 run_atlas
[2025-10-12 14:26:46] -rw-r--r-- 1 boincer umatlas       105 Oct 12 11:27 job.xml
[2025-10-12 14:26:46] -rw-r--r-- 2 boincer umatlas 219920271 Oct 12 11:27 EVNT.46676267._001564.pool.root.1
[2025-10-12 14:26:46] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 11:27 start_atlas.sh
[2025-10-12 14:26:46] drwxrwx--x 2 boincer umatlas      4096 Oct 12 11:27 shared
[2025-10-12 14:26:46] -rw-r--r-- 2 boincer umatlas    569678 Oct 12 11:27 input.tar.gz
[2025-10-12 14:26:46] -rw-r--r-- 1 boincer umatlas         0 Oct 12 11:27 boinc_lockfile
[2025-10-12 14:26:46] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 11:27 pandaJob.out
[2025-10-12 14:26:46] -rw------- 1 boincer umatlas    975528 Oct 12 11:27 agis_schedconf.cvmfs.json
[2025-10-12 14:26:46] -rw------- 1 boincer umatlas   1560580 Oct 12 11:27 agis_ddmendpoints.agis.ALL.json
[2025-10-12 14:26:46] drwx------ 5 boincer umatlas      4096 Oct 12 11:27 pilot3
[2025-10-12 14:26:46] -rw-r--r-- 1 boincer umatlas      5953 Oct 12 14:20 init_data.xml
[2025-10-12 14:26:46] -rw------- 1 boincer umatlas 190305447 Oct 12 14:25 HITS.46676269._078146.pool.root.1
[2025-10-12 14:26:46] -rw------- 1 boincer umatlas      1054 Oct 12 14:25 memory_monitor_summary.json
[2025-10-12 14:26:46] -rw------- 1 boincer umatlas    414163 Oct 12 14:25 log.46676269._078146.job.log.tgz.1
[2025-10-12 14:26:46] -rw-r--r-- 1 boincer umatlas       531 Oct 12 14:25 boinc_task_state.xml
[2025-10-12 14:26:46] -rw------- 1 boincer umatlas      7860 Oct 12 14:25 heartbeat.json
[2025-10-12 14:26:46] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 14:26 boinc_mmap_file
[2025-10-12 14:26:46] -rw-r--r-- 1 boincer umatlas        28 Oct 12 14:26 wrapper_checkpoint.txt
[2025-10-12 14:26:46] -rw------- 1 boincer umatlas        95 Oct 12 14:26 pilot_heartbeat.json
[2025-10-12 14:26:46] -rw------- 1 boincer umatlas      5078 Oct 12 14:26 pilotlog.txt
[2025-10-12 14:26:46] -rw------- 1 boincer umatlas   1499283 Oct 12 14:26 log.46676269._078146.job.log.1
[2025-10-12 14:26:46] -rw------- 1 boincer umatlas       357 Oct 12 14:26 output.list
[2025-10-12 14:26:46] -rw-r--r-- 1 boincer umatlas       620 Oct 12 14:26 runtime_log
[2025-10-12 14:26:46] -rw------- 1 boincer umatlas   1935360 Oct 12 14:26 result.tar.gz
[2025-10-12 14:26:46] -rw-r--r-- 1 boincer umatlas      8704 Oct 12 14:26 runtime_log.err
[2025-10-12 14:26:46] -rw------- 1 boincer umatlas       660 Oct 12 14:26 Kq2LDmzNAS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4ljNDmUtvQQn.diag
[2025-10-12 14:26:46] -rw-r--r-- 1 boincer umatlas     20884 Oct 12 14:26 stderr.txt
[2025-10-12 14:26:46] HITS file was successfully produced:
[2025-10-12 14:26:46] -rw------- 1 boincer umatlas 190305447 Oct 12 14:25 shared/HITS.pool.root.1
[2025-10-12 14:26:46]  *** Contents of shared directory: ***
[2025-10-12 14:26:46] total 403088
[2025-10-12 14:26:46] -rw-r--r-- 2 boincer umatlas 219920271 Oct 12 11:27 ATLAS.root_0
[2025-10-12 14:26:46] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 11:27 start_atlas.sh
[2025-10-12 14:26:46] -rw-r--r-- 2 boincer umatlas    569678 Oct 12 11:27 input.tar.gz
[2025-10-12 14:26:46] -rw------- 1 boincer umatlas 190305447 Oct 12 14:25 HITS.pool.root.1
[2025-10-12 14:26:46] -rw------- 1 boincer umatlas   1935360 Oct 12 14:26 result.tar.gz
14:26:47 (4868): run_atlas exited; CPU time 81485.460522
14:26:47 (4868): called boinc_finish(0)

</stderr_txt>
]]>

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