Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-12 17:48:41 (15484): vboxwrapper version 26210
2025-10-12 17:48:41 (15484): BOINC client version: 8.0.2
2025-10-12 17:48:41 (15484): Detected: VirtualBox VboxManage Interface (Version: 7.0.12)
2025-10-12 17:48:42 (15484): Successfully copied 'init_data.xml' to the shared directory.
2025-10-12 17:48:42 (15484): Create VM. (boinc_493b81eeefcf5125, slot#2)
2025-10-12 17:48:42 (15484): Setting Memory Size for VM. (4400MB)
2025-10-12 17:48:43 (15484): Setting CPU Count for VM. (4)
2025-10-12 17:48:43 (15484): Setting Chipset Options for VM.
2025-10-12 17:48:43 (15484): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-12 17:48:43 (15484): Setting Boot Options for VM.
2025-10-12 17:48:44 (15484): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-12 17:48:44 (15484): Enabling VM Network Access.
2025-10-12 17:48:45 (15484): Disabling USB Support for VM.
2025-10-12 17:48:45 (15484): Disabling COM Port Support for VM.
2025-10-12 17:48:45 (15484): Disabling LPT Port Support for VM.
2025-10-12 17:48:45 (15484): Disabling Audio Support for VM.
2025-10-12 17:48:46 (15484): Disabling Clipboard Support for VM.
2025-10-12 17:48:46 (15484): Disabling Drag and Drop Support for VM.
2025-10-12 17:48:46 (15484): Adding storage controller(s) to VM.
2025-10-12 17:48:46 (15484): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-12 17:48:49 (15484): Adding VirtualBox Guest Additions to VM.
2025-10-12 17:48:49 (15484): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-12 17:48:49 (15484): forwarding host port 61998 to guest port 80
2025-10-12 17:48:50 (15484): Enabling remote desktop for VM.
2025-10-12 17:48:50 (15484): Enabling shared directory for VM.
2025-10-12 17:48:51 (15484): Starting VM using VBoxManage interface. (boinc_493b81eeefcf5125, slot#2)
2025-10-12 17:48:58 (15484): Successfully started VM. (PID = '4396')
2025-10-12 17:48:58 (15484): Reporting VM Process ID to BOINC.
2025-10-12 17:48:58 (15484): Guest Log: BIOS: VirtualBox 7.0.12
2025-10-12 17:48:58 (15484): Guest Log: CPUID EDX: 0x178bfbff
2025-10-12 17:48:58 (15484): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-12 17:48:58 (15484): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-12 17:48:58 (15484): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-12 17:48:58 (15484): Detected: Web Application Enabled (http://localhost:61998)
2025-10-12 17:48:58 (15484): Detected: Remote Desktop Enabled (localhost:61999)
2025-10-12 17:48:58 (15484): Preference change detected
2025-10-12 17:48:58 (15484): Setting CPU throttle for VM. (100%)
2025-10-12 17:48:58 (15484): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-12 17:49:00 (15484): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-12 17:49:00 (15484): Guest Log: BIOS: Booting from Hard Disk...
2025-10-12 17:49:03 (15484): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-12 17:49:03 (15484): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-12 17:49:03 (15484): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-12 17:49:03 (15484): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-12 17:49:03 (15484): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-12 17:49:03 (15484): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-12 17:49:03 (15484): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-12 17:49:03 (15484): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-12 17:49:03 (15484): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-12 17:49:03 (15484): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-12 17:49:03 (15484): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-12 17:49:03 (15484): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-12 17:49:03 (15484): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-12 17:49:03 (15484): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-12 17:49:03 (15484): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-12 17:49:03 (15484): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-12 17:49:03 (15484): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-12 17:49:03 (15484): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-12 17:49:03 (15484): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-12 17:49:03 (15484): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-12 17:49:03 (15484): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-12 17:49:03 (15484): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-12 17:49:03 (15484): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-12 17:49:03 (15484): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-12 17:49:03 (15484): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-12 17:49:03 (15484): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-12 17:49:03 (15484): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-12 17:49:03 (15484): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-12 17:49:03 (15484): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-12 17:49:03 (15484): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-12 17:49:03 (15484): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-12 17:49:03 (15484): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-12 17:49:10 (15484): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-12 17:49:10 (15484): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-12 17:49:20 (15484): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-12 17:49:20 (15484): Guest Log: 00:00:00.000283 main     Log opened 2025-10-12T17:49:17.893971000Z
2025-10-12 17:49:20 (15484): Guest Log: 00:00:00.000413 main     OS Product: Linux
2025-10-12 17:49:20 (15484): Guest Log: 00:00:00.000457 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-12 17:49:20 (15484): Guest Log: 00:00:00.000495 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-12 17:49:20 (15484): Guest Log: 00:00:00.000533 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-12 17:49:20 (15484): Guest Log: 00:00:00.000535 main     Process ID: 1305
2025-10-12 17:49:20 (15484): Guest Log: 00:00:00.000536 main     Package type: LINUX_64BITS_GENERIC
2025-10-12 17:49:20 (15484): Guest Log: 00:00:00.002142 main     5.2.32 r132073 started. Verbose level = 0
2025-10-12 17:49:20 (15484): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-12 17:49:20 (15484): Guest Log: [INFO] Mounting shared directory
2025-10-12 17:49:20 (15484): Guest Log: [INFO] Checking for init_data.xml
2025-10-12 17:49:30 (15484): Guest Log: 00:00:10.006984 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 600 859 000ns (GuestNow=1 760 284 169 297 314 000 ns GuestLast=1 760 291 357 898 173 000 ns fSetTimeLastLoop=true )
2025-10-12 17:50:21 (15484): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-12 17:50:21 (15484): Guest Log: [INFO] Detected branch: prod
2025-10-12 17:50:23 (15484): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-12 17:50:23 (15484): Guest Log: Copying input files
2025-10-12 17:50:24 (15484): Guest Log: Copied input files into RunAtlas.
2025-10-12 17:50:24 (15484): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-12 17:50:24 (15484): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-12 17:50:24 (15484): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-12 17:50:24 (15484): Guest Log: Further information can be found at the LHC@home message board.
2025-10-12 17:51:02 (15484): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-12 17:51:02 (15484): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-12 17:51:02 (15484): Guest Log: 2.6.3.0 1604 1 30160 151625 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-12 17:51:04 (15484): Guest Log: copied the webapp to /var/www
2025-10-12 17:51:04 (15484): Guest Log: ATHENA_PROC_NUMBER=4
2025-10-12 17:51:04 (15484): Guest Log: ATHENA_CORE_NUMBER=4
2025-10-12 17:51:04 (15484): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-12 17:51:04 (15484): Guest Log:  *** Starting ATLAS job. (PandaID=6839928037 taskID=46676269) ***
2025-10-12 18:07:44 (15484): VM state change detected. (old = 'running', new = 'paused')
2025-10-12 18:08:04 (15484): VM state change detected. (old = 'paused', new = 'running')
2025-10-12 18:16:36 (15484): Guest Log:  *** Job finished ***
2025-10-12 18:16:36 (15484): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-12 18:16:36 (15484): Guest Log: 2025-10-12 16:16:07,081 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-12 18:16:36 (15484): Guest Log: 2025-10-12 16:16:07,081 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-12 18:16:36 (15484): Guest Log: 2025-10-12 16:16:10,377 | INFO     | [monitor] cgroup control has ended
2025-10-12 18:16:36 (15484): Guest Log: 2025-10-12 16:16:10,783 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139705794484032)>', '<ExcThread(monitor, started 139705068803840)>']
2025-10-12 18:16:36 (15484): Guest Log: 2025-10-12 16:16:11,125 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-12 18:16:36 (15484): Guest Log: 2025-10-12 16:16:11,126 | INFO     | [monitor] control thread has ended
2025-10-12 18:16:36 (15484): Guest Log: 2025-10-12 16:16:15,786 | INFO     | all workflow threads have been joined
2025-10-12 18:16:36 (15484): Guest Log: 2025-10-12 16:16:15,787 | INFO     | end of generic workflow (traces error code: 0)
2025-10-12 18:16:36 (15484): Guest Log: 2025-10-12 16:16:15,789 | INFO     | traces error code: 0
2025-10-12 18:16:36 (15484): Guest Log: 2025-10-12 16:16:15,790 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-12 18:16:36 (15484): Guest Log: 2025-10-12 16:16:15,952 [wrapper] ==== pilot stdout END ====
2025-10-12 18:16:36 (15484): Guest Log: 2025-10-12 16:16:15,958 [wrapper] ==== wrapper stdout RESUME ====
2025-10-12 18:16:36 (15484): Guest Log: 2025-10-12 16:16:15,963 [wrapper] pilotpid: 6094
2025-10-12 18:16:36 (15484): Guest Log: 2025-10-12 16:16:15,969 [wrapper] Pilot exit status: 0
2025-10-12 18:16:36 (15484): Guest Log: 2025-10-12 16:16:16,492 [wrapper] pandaids: 6839928037
2025-10-12 18:16:36 (15484): Guest Log: 2025-10-12 16:16:16,570 [wrapper] cleanup supervisor_pilot 19051 6095
2025-10-12 18:16:36 (15484): Guest Log: 2025-10-12 16:16:16,577 [wrapper] Test setup, not cleaning
2025-10-12 18:16:36 (15484): Guest Log: 2025-10-12 16:16:16,583 [wrapper] apfmon messages muted
2025-10-12 18:16:36 (15484): Guest Log: 2025-10-12 16:16:16,589 [wrapper] ==== wrapper stdout END ====
2025-10-12 18:16:36 (15484): Guest Log: 2025-10-12 16:16:16,595 [wrapper] ==== wrapper stderr END ====
2025-10-12 18:16:36 (15484): Guest Log:  *** Error codes and diagnostics ***
2025-10-12 18:16:36 (15484): Guest Log:     "exeErrorCode": 65,
2025-10-12 18:16:36 (15484): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
2025-10-12 18:16:36 (15484): Guest Log:     "pilotErrorCode": 1305,
2025-10-12 18:16:36 (15484): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
2025-10-12 18:16:36 (15484): Guest Log:  *** Listing of results directory ***
2025-10-12 18:16:36 (15484): Guest Log: total 4124
2025-10-12 18:16:36 (15484): Guest Log: -rw-r--r--. 1 atlas atlas  557409 Oct 12 11:54 pilot3.tar.gz
2025-10-12 18:16:36 (15484): Guest Log: -rwx------. 1 atlas atlas   36292 Oct 12 12:03 runpilot2-wrapper.sh
2025-10-12 18:16:36 (15484): Guest Log: -rw-r--r--. 1 atlas atlas    5112 Oct 12 12:03 queuedata.json
2025-10-12 18:16:36 (15484): Guest Log: -rwxr-xr-x. 1 atlas atlas    8162 Oct 12 15:50 init_data.xml
2025-10-12 18:16:36 (15484): Guest Log: -rwxr-xr-x. 1 atlas atlas  569677 Oct 12 15:50 input.tar.gz
2025-10-12 18:16:36 (15484): Guest Log: -rwxr-xr-x. 1 atlas atlas   15120 Oct 12 15:50 start_atlas.sh
2025-10-12 18:16:36 (15484): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Oct 12 15:50 EVNT.46676267._003716.pool.root.1 -> /data/./ATLAS.root_0
2025-10-12 18:16:36 (15484): Guest Log: -rw-r--r--. 1 atlas atlas    2550 Oct 12 15:51 pandaJob.out
2025-10-12 18:16:36 (15484): Guest Log: -rw-------. 1 atlas atlas  975528 Oct 12 16:00 agis_schedconf.cvmfs.json
2025-10-12 18:16:36 (15484): Guest Log: -rw-------. 1 atlas atlas 1560580 Oct 12 16:00 agis_ddmendpoints.agis.ALL.json
2025-10-12 18:16:36 (15484): Guest Log: drwx------. 5 atlas atlas    4096 Oct 12 16:01 pilot3
2025-10-12 18:16:36 (15484): Guest Log: -rw-------. 1 atlas atlas    1004 Oct 12 16:13 memory_monitor_summary.json
2025-10-12 18:16:36 (15484): Guest Log: -rw-------. 1 atlas atlas   29893 Oct 12 16:13 log.46676269._077576.job.log.tgz.1
2025-10-12 18:16:36 (15484): Guest Log: -rw-------. 1 atlas atlas      95 Oct 12 16:15 pilot_heartbeat.json
2025-10-12 18:16:36 (15484): Guest Log: -rw-------. 1 atlas atlas    8461 Oct 12 16:15 heartbeat.json
2025-10-12 18:16:36 (15484): Guest Log: -rw-------. 1 atlas atlas    4805 Oct 12 16:16 pilotlog.txt
2025-10-12 18:16:36 (15484): Guest Log: -rw-------. 1 atlas atlas  163779 Oct 12 16:16 log.46676269._077576.job.log.1
2025-10-12 18:16:36 (15484): Guest Log: -rw-------. 1 atlas atlas     188 Oct 12 16:16 output.list
2025-10-12 18:16:36 (15484): Guest Log: -rw-r--r--. 1 atlas atlas     620 Oct 12 16:16 runtime_log
2025-10-12 18:16:36 (15484): Guest Log: -rw-------. 1 atlas atlas  215040 Oct 12 16:16 result.tar.gz
2025-10-12 18:16:36 (15484): Guest Log: -rw-r--r--. 1 atlas atlas    8514 Oct 12 16:16 runtime_log.err
2025-10-12 18:16:36 (15484): Guest Log: -rw-------. 1 atlas atlas     652 Oct 12 16:16 i88LDm4y9R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmroTMDmj1waFn.diag
2025-10-12 18:16:36 (15484): Guest Log: Looking for outputfile HITS.46676269._077576.pool.root.1
2025-10-12 18:16:36 (15484): Guest Log: No HITS file was produced
2025-10-12 18:16:36 (15484): Guest Log: Successfully finished the ATLAS job!
2025-10-12 18:16:36 (15484): Guest Log: Copying the results back to the shared directory!
2025-10-12 18:16:36 (15484): Guest Log:  *** Contents of shared directory: ***
2025-10-12 18:16:37 (15484): Guest Log: total 219456
2025-10-12 18:16:37 (15484): Guest Log: -rwxrwxrwx. 1 root root 223907340 Oct 12 15:48 ATLAS.root_0
2025-10-12 18:16:37 (15484): Guest Log: -rwxrwxrwx. 1 root root      8162 Oct 12 15:48 init_data.xml
2025-10-12 18:16:37 (15484): Guest Log: -rwxrwxrwx. 1 root root    569677 Oct 12 15:28 input.tar.gz
2025-10-12 18:16:37 (15484): Guest Log: -rwxrwxrwx. 1 root root    215040 Oct 12  2025 result.tar.gz
2025-10-12 18:16:37 (15484): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 12 15:28 start_atlas.sh
2025-10-12 18:16:37 (15484): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-12 18:16:37 (15484): VM Completion File Detected.
2025-10-12 18:16:37 (15484): Powering off VM.
2025-10-12 18:16:38 (15484): Successfully stopped VM.
2025-10-12 18:16:38 (15484): Deregistering VM. (boinc_493b81eeefcf5125, slot#2)
2025-10-12 18:16:38 (15484): Removing network bandwidth throttle group from VM.
2025-10-12 18:16:39 (15484): Removing VM from VirtualBox.
2025-10-12 18:16:44 (15484): called boinc_finish(0)

</stderr_txt>
]]>

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