Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:01:57 (1722620): wrapper (7.7.26015): starting
09:01:57 (1722620): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 09:01:57] Arguments: --nthreads 12
[2025-10-12 09:01:57] Threads: 12
[2025-10-12 09:01:57] Checking for CVMFS
[2025-10-12 09:01:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 09:01:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 09:01:58] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 09:01:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 09:01:59] 2.11.5.0 2538 31708 199772 151625 3 219 33654573 45568001 16596 130560 0 325951485 99.867 138875254 28847 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-12 09:01:59] CVMFS is ok
[2025-10-12 09:01:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 09:01:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 09:01:59] Further information can be found at the LHC@home message board.
[2025-10-12 09:01:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 09:01:59] Checking for apptainer binary...
[2025-10-12 09:01:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 09:01:59] Running /usr/bin/apptainer --version
[2025-10-12 09:02:00] apptainer version 1.4.1-1.el9
[2025-10-12 09:02:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 09:02:01] wns0038.triumf.lcg
[2025-10-12 09:02:01] apptainer works
[2025-10-12 09:02:01] Set ATHENA_PROC_NUMBER=12
[2025-10-12 09:02:01] Set ATHENA_CORE_NUMBER=12
[2025-10-12 09:02:01] Starting ATLAS job with PandaID=6840181307
[2025-10-12 09:02:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 09:07:49]  *** The last 200 lines of the pilot log: ***
[2025-10-12 09:07:49] 2025-10-12 16:07:08,798 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 09:07:49] 2025-10-12 16:07:08,799 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 09:07:49] 2025-10-12 16:07:08,799 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 09:07:49] 2025-10-12 16:07:08,799 | WARNING  | wrong length of table data, x=[1760285062.0], y=[880.0] (must be same and length>=4)
[2025-10-12 09:07:49] 2025-10-12 16:07:08,799 | INFO     | could have reported an average CPU frequency of 2593 MHz (4 samples)
[2025-10-12 09:07:49] 2025-10-12 16:07:08,799 | INFO     | ..............................
[2025-10-12 09:07:49] 2025-10-12 16:07:08,799 | INFO     | . Timing measurements:
[2025-10-12 09:07:49] 2025-10-12 16:07:08,799 | INFO     | . get job = 0 s
[2025-10-12 09:07:49] 2025-10-12 16:07:08,799 | INFO     | . initial setup = 4 s
[2025-10-12 09:07:49] 2025-10-12 16:07:08,799 | INFO     | . payload setup = 25 s
[2025-10-12 09:07:49] 2025-10-12 16:07:08,800 | INFO     | . stage-in = 0 s
[2025-10-12 09:07:49] 2025-10-12 16:07:08,800 | INFO     | . payload execution = 47 s
[2025-10-12 09:07:49] 2025-10-12 16:07:08,800 | INFO     | . stage-out = 0 s
[2025-10-12 09:07:49] 2025-10-12 16:07:08,800 | INFO     | . log creation = 0 s
[2025-10-12 09:07:49] 2025-10-12 16:07:08,800 | INFO     | ..............................
[2025-10-12 09:07:49] 2025-10-12 16:07:08,800 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 09:07:49] 2025-10-12 16:07:08,800 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6840181307/pilotlog.txt
[2025-10-12 09:07:49] 2025-10-12 16:07:08,835 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-12 09:07:49] - Log from pilotlog.txt -
[2025-10-12 09:07:49] 2025-10-12 16:07:08,798 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6840181307/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 09:07:49] 2025-10-12 16:07:08,798 | INFO     | extracted standard info from prmon json
[2025-10-12 09:07:49] 2025-10-12 16:07:08,798 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 09:07:49] 2025-10-12 16:07:08,798 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 09:07:49] 2025-10-12 16:07:08,799 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 09:07:49] 2025-10-12 16:07:08,799 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 09:07:49] 2025-10-12 16:07:08,799 | WARNING  | wrong length of table data, x=[1760285062.0], y=[880.0] (must be same and length>=4)
[2025-10-12 09:07:49] 2025-10-12 16:07:08,799 | INFO     | could have reported an average CPU frequency of 2593 MHz (4 samples)
[2025-10-12 09:07:49] 2025-10-12 16:07:08,799 | INFO     | ..............................
[2025-10-12 09:07:49] 2025-10-12 16:07:08,799 | INFO     | . Timing measurements:
[2025-10-12 09:07:49] 2025-10-12 16:07:08,799 | INFO     | . get job = 0 s
[2025-10-12 09:07:49] 2025-10-12 16:07:08,799 | INFO     | . initial setup = 4 s
[2025-10-12 09:07:49] 2025-10-12 16:07:08,799 | INFO     | . payload setup = 25 s
[2025-10-12 09:07:49] 2025-10-12 16:07:08,800 | INFO     | . stage-in = 0 s
[2025-10-12 09:07:49] 2025-10-12 16:07:08,800 | INFO     | . payload execution = 47 s
[2025-10-12 09:07:49] 2025-10-12 16:07:08,800 | INFO     | . stage-out = 0 s
[2025-10-12 09:07:49] 2025-10-12 16:07:08,800 | INFO     | . log creation = 0 s
[2025-10-12 09:07:49] 2025-10-12 16:07:08,800 | INFO     | ..............................
[2025-10-12 09:07:49] 2025-10-12 16:07:08,800 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 09:07:49] 2025-10-12 16:07:08,800 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6840181307/pilotlog.txt
[2025-10-12 09:07:49] 2025-10-12 16:07:08,861 | WARNING  | 
[2025-10-12 09:07:49] [begin log extracts]
[2025-10-12 09:07:49] - Log from pilotlog.txt -
[2025-10-12 09:07:49] 2025-10-12 16:07:08,798 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6840181307/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 09:07:49] 2025-10-12 16:07:08,798 | INFO     | extracted standard info from prmon json
[2025-10-12 09:07:49] 2025-10-12 16:07:08,798 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 09:07:49] 2025-10-12 16:07:08,798 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 09:07:49] 2025-10-12 16:07:08,799 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 09:07:49] 2025-10-12 16:07:08,799 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 09:07:49] 2025-10-12 16:07:08,799 | WARNING  | wrong length of table data, x=[1760285062.0], y=[880.0] (must be same and length>=4)
[2025-10-12 09:07:49] 2025-10-12 16:07:08,799 | INFO     | could have reported an average CPU frequency of 2593 MHz (4 samples)
[2025-10-12 09:07:49] 2025-10-12 16:07:08,799 | INFO     | ..............................
[2025-10-12 09:07:49] 2025-10-12 16:07:08,799 | INFO     | . Timing measurements:
[2025-10-12 09:07:49] 2025-10-12 16:07:08,799 | INFO     | . get job = 0 s
[2025-10-12 09:07:49] 2025-10-12 16:07:08,799 | INFO     | . initial setup = 4 s
[2025-10-12 09:07:49] 2025-10-12 16:07:08,799 | INFO     | . payload setup = 25 s
[2025-10-12 09:07:49] 2025-10-12 16:07:08,800 | INFO     | . stage-in = 0 s
[2025-10-12 09:07:49] 2025-10-12 16:07:08,800 | INFO     | . payload execution = 47 s
[2025-10-12 09:07:49] 2025-10-12 16:07:08,800 | INFO     | . stage-out = 0 s
[2025-10-12 09:07:49] 2025-10-12 16:07:08,800 | INFO     | . log creation = 0 s
[2025-10-12 09:07:49] 2025-10-12 16:07:08,800 | INFO     | ..............................
[2025-10-12 09:07:49] 2025-10-12 16:07:08,800 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 09:07:49] 2025-10-12 16:07:08,800 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6840181307/pilotlog.txt
[2025-10-12 09:07:49] [end log extracts]
[2025-10-12 09:07:49] 2025-10-12 16:07:08,861 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-12 09:07:49] 2025-10-12 16:07:08,862 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-12 09:07:49] 2025-10-12 16:07:09,364 | INFO     | 
[2025-10-12 09:07:49] 2025-10-12 16:07:09,364 | INFO     | job summary report
[2025-10-12 09:07:49] 2025-10-12 16:07:09,364 | INFO     | --------------------------------------------------
[2025-10-12 09:07:49] 2025-10-12 16:07:09,364 | INFO     | PanDA job id: 6840181307
[2025-10-12 09:07:49] 2025-10-12 16:07:09,364 | INFO     | task id: 46676269
[2025-10-12 09:07:49] 2025-10-12 16:07:09,364 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-12 09:04:43,487 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-12 09:07:49] 2025-10-12 16:07:09,364 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 09:07:49] 2025-10-12 16:07:09,365 | INFO     | pilot state: failed 
[2025-10-12 09:07:49] 2025-10-12 16:07:09,365 | INFO     | transexitcode: 65
[2025-10-12 09:07:49] 2025-10-12 16:07:09,365 | INFO     | exeerrorcode: 65
[2025-10-12 09:07:49] 2025-10-12 16:07:09,365 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 09:07:49] 2025-10-12 16:07:09,365 | INFO     | exitcode: 65
[2025-10-12 09:07:49] 2025-10-12 16:07:09,365 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 09:07:49] 2025-10-12 16:07:09,365 | INFO     | cpuconsumptiontime: 18 s
[2025-10-12 09:07:49] 2025-10-12 16:07:09,365 | INFO     | nevents: 0
[2025-10-12 09:07:49] 2025-10-12 16:07:09,365 | INFO     | neventsw: 0
[2025-10-12 09:07:49] 2025-10-12 16:07:09,365 | INFO     | pid: 1733354
[2025-10-12 09:07:49] 2025-10-12 16:07:09,365 | INFO     | pgrp: 1733354
[2025-10-12 09:07:49] 2025-10-12 16:07:09,365 | INFO     | corecount: 12
[2025-10-12 09:07:49] 2025-10-12 16:07:09,365 | INFO     | event service: False
[2025-10-12 09:07:49] 2025-10-12 16:07:09,365 | INFO     | sizes: {0: 2348029, 1: 2348711, 2: 2348910, 3: 2348910, 14: 2348938, 25: 2348966, 27: 2349384, 35: 2349412, 77: 2372790, 79: 2377082, 80: 2377138, 214: 2377584}
[2025-10-12 09:07:49] 2025-10-12 16:07:09,365 | INFO     | --------------------------------------------------
[2025-10-12 09:07:49] 2025-10-12 16:07:09,365 | INFO     | 
[2025-10-12 09:07:49] 2025-10-12 16:07:09,365 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-12 09:07:49] 2025-10-12 16:07:09,408 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 09:07:49] 2025-10-12 16:07:09,409 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 09:07:49] 2025-10-12 16:07:09,409 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 09:07:49] 2025-10-12 16:07:09,409 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 09:07:49] 2025-10-12 16:07:09,409 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 09:07:49] 2025-10-12 16:07:09,411 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 09:07:49] 2025-10-12 16:07:09,411 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 09:07:49] 2025-10-12 16:07:09,411 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 09:07:49] 2025-10-12 16:07:09,411 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 09:07:49] 2025-10-12 16:07:09,411 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 09:07:49] 2025-10-12 16:07:09,411 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 09:07:49] 2025-10-12 16:07:09,411 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 09:07:49] 2025-10-12 16:07:09,411 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 09:07:49] 2025-10-12 16:07:09,411 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 09:07:49] 2025-10-12 16:07:09,411 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 09:07:49] 2025-10-12 16:07:09,411 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 09:07:49] 2025-10-12 16:07:09,411 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 09:07:49] 2025-10-12 16:07:09,413 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 09:07:49] 2025-10-12 16:07:09,413 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 09:07:49] 2025-10-12 16:07:09,413 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 09:07:49] 2025-10-12 16:07:09,413 | INFO     | job 6840181307 has completed (purged errors)
[2025-10-12 09:07:49] 2025-10-12 16:07:09,413 | INFO     | overall cleanup function is called
[2025-10-12 09:07:49] 2025-10-12 16:07:10,423 | INFO     | --- collectZombieJob: --- 10, [1733354]
[2025-10-12 09:07:49] 2025-10-12 16:07:10,423 | INFO     | zombie collector waiting for pid 1733354
[2025-10-12 09:07:49] 2025-10-12 16:07:10,423 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 09:07:49] 2025-10-12 16:07:10,423 | INFO     | collected zombie processes
[2025-10-12 09:07:49] 2025-10-12 16:07:10,423 | INFO     | will attempt to kill all subprocesses of pid=1733354
[2025-10-12 09:07:49] 2025-10-12 16:07:11,083 | INFO     | process IDs to be killed: [1733354] (in reverse order)
[2025-10-12 09:07:49] 2025-10-12 16:07:11,256 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 09:07:49] 2025-10-12 16:07:11,256 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 09:07:49] 2025-10-12 16:07:11,316 | INFO     | did not find any defunct processes belonging to 1733354
[2025-10-12 09:07:49] 2025-10-12 16:07:11,341 | INFO     | did not find any defunct processes belonging to 1733354
[2025-10-12 09:07:49] 2025-10-12 16:07:11,344 | INFO     | ready for new job
[2025-10-12 09:07:49] 2025-10-12 16:07:11,344 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 09:07:49] 2025-10-12 16:07:11,346 | INFO     | ***************************************
[2025-10-12 09:07:49] 2025-10-12 16:07:11,349 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 09:07:49] 2025-10-12 16:07:11,349 | INFO     | ***************************************
[2025-10-12 09:07:49] 2025-10-12 16:07:11,349 | INFO     | 
[2025-10-12 09:07:49] 2025-10-12 16:07:11,352 | INFO     | architecture information:
[2025-10-12 09:07:49] 2025-10-12 16:07:11,353 | INFO     | executing command: cat /etc/os-release
[2025-10-12 09:07:49] 2025-10-12 16:07:11,372 | INFO     | cat /etc/os-release:
[2025-10-12 09:07:49] NAME="CentOS Linux"
[2025-10-12 09:07:49] VERSION="7 (Core)"
[2025-10-12 09:07:49] ID="centos"
[2025-10-12 09:07:49] ID_LIKE="rhel fedora"
[2025-10-12 09:07:49] VERSION_ID="7"
[2025-10-12 09:07:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 09:07:49] ANSI_COLOR="0;31"
[2025-10-12 09:07:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 09:07:49] HOME_URL="https://www.centos.org/"
[2025-10-12 09:07:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 09:07:49] 
[2025-10-12 09:07:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 09:07:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 09:07:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 09:07:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 09:07:49] 
[2025-10-12 09:07:49] 2025-10-12 16:07:11,372 | INFO     | ***************************************
[2025-10-12 09:07:49] 2025-10-12 16:07:11,876 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-12 09:07:49] 2025-10-12 16:07:11,925 | INFO     | sufficient remaining disk space (2011679424512 B)
[2025-10-12 09:07:49] 2025-10-12 16:07:11,925 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 09:07:49] 2025-10-12 16:07:11,933 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 09:07:49] 2025-10-12 16:07:11,933 | INFO     | update_server=False
[2025-10-12 09:07:49] 2025-10-12 16:07:11,933 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 09:07:49] 2025-10-12 16:07:11,934 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 09:07:49] 2025-10-12 16:07:12,191 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:07:49] 2025-10-12 16:07:12,191 | INFO     | aborting loop
[2025-10-12 09:07:49] 2025-10-12 16:07:12,404 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 09:07:49] 2025-10-12 16:07:12,404 | INFO     | all data control threads have been joined
[2025-10-12 09:07:49] 2025-10-12 16:07:12,731 | INFO     | all payload control threads have been joined
[2025-10-12 09:07:49] 2025-10-12 16:07:12,941 | INFO     | [job] retrieve thread has finished
[2025-10-12 09:07:49] 2025-10-12 16:07:12,941 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 09:07:49] 2025-10-12 16:07:13,197 | INFO     | [job] job monitor thread has finished
[2025-10-12 09:07:49] 2025-10-12 16:07:13,206 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 09:07:49] 2025-10-12 16:07:13,260 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 09:07:49] 2025-10-12 16:07:13,294 | INFO     | [payload] failed_post thread has finished
[2025-10-12 09:07:49] 2025-10-12 16:07:13,311 | INFO     | [data] copytool_in thread has finished
[2025-10-12 09:07:49] 2025-10-12 16:07:13,369 | INFO     | all job control threads have been joined
[2025-10-12 09:07:49] 2025-10-12 16:07:13,410 | INFO     | [data] control thread has finished
[2025-10-12 09:07:49] 2025-10-12 16:07:13,515 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 09:07:49] 2025-10-12 16:07:13,519 | INFO     | [job] validate thread has finished
[2025-10-12 09:07:49] 2025-10-12 16:07:13,739 | INFO     | [payload] control thread has finished
[2025-10-12 09:07:49] 2025-10-12 16:07:13,941 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:07:49] 2025-10-12 16:07:14,043 | INFO     | [payload] validate_post thread has finished
[2025-10-12 09:07:49] 2025-10-12 16:07:14,375 | INFO     | [job] control thread has finished
[2025-10-12 09:07:49] 2025-10-12 16:07:14,411 | INFO     | [data] copytool_out thread has finished
[2025-10-12 09:07:49] 2025-10-12 16:07:14,947 | INFO     | [job] queue monitor thread has finished
[2025-10-12 09:07:49] 2025-10-12 16:07:15,964 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 09:07:49] 2025-10-12 16:07:41,063 | INFO     | PID=1726456 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 09:07:49] 2025-10-12 16:07:41,064 | INFO     | .. there are 42 such processes running
[2025-10-12 09:07:49] 2025-10-12 16:07:41,064 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 09:07:49] 2025-10-12 16:07:41,064 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 09:07:49] 2025-10-12 16:07:41,064 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 09:07:49] 2025-10-12 16:07:41,355 | INFO     | [monitor] cgroup control has ended
[2025-10-12 09:07:49] 2025-10-12 16:07:42,890 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140190824081216)>', '<ExcThread(monitor, started 140189989062400)>']
[2025-10-12 09:07:49] 2025-10-12 16:07:43,080 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 09:07:49] 2025-10-12 16:07:43,080 | INFO     | [monitor] control thread has ended
[2025-10-12 09:07:49] 2025-10-12 16:07:47,916 | INFO     | all workflow threads have been joined
[2025-10-12 09:07:49] 2025-10-12 16:07:47,916 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 09:07:49] 2025-10-12 16:07:47,916 | INFO     | traces error code: 0
[2025-10-12 09:07:49] 2025-10-12 16:07:47,917 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 09:07:49] 2025-10-12 16:07:48,320 [wrapper] ==== pilot stdout END ====
[2025-10-12 09:07:49] 2025-10-12 16:07:48,327 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 09:07:49] 2025-10-12 16:07:48,333 [wrapper] pilotpid: 1726456
[2025-10-12 09:07:49] 2025-10-12 16:07:48,360 [wrapper] Pilot exit status: 0
[2025-10-12 09:07:49] 2025-10-12 16:07:48,499 [wrapper] pandaids: 6840181307
[2025-10-12 09:07:49] 2025-10-12 16:07:48,940 [wrapper] cleanup supervisor_pilot 1726462 1726457
[2025-10-12 09:07:49] 2025-10-12 16:07:48,971 [wrapper] Test setup, not cleaning
[2025-10-12 09:07:49] 2025-10-12 16:07:48,990 [wrapper] apfmon messages muted
[2025-10-12 09:07:49] 2025-10-12 16:07:49,015 [wrapper] ==== wrapper stdout END ====
[2025-10-12 09:07:49] 2025-10-12 16:07:49,017 [wrapper] ==== wrapper stderr END ====
[2025-10-12 09:07:49]  *** Error codes and diagnostics ***
[2025-10-12 09:07:49]     "exeErrorCode": 65,
[2025-10-12 09:07:49]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 09:07:49]     "pilotErrorCode": 1305,
[2025-10-12 09:07:49]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 09:07:49]  *** Listing of results directory ***
[2025-10-12 09:07:49] total 219172
[2025-10-12 09:07:49] -rw-r--r--. 1 boinc boinc    557409 Oct 12 06:55 pilot3.tar.gz
[2025-10-12 09:07:49] -rw-r--r--. 1 boinc boinc      5112 Oct 12 07:08 queuedata.json
[2025-10-12 09:07:49] -rwx------. 1 boinc boinc     36292 Oct 12 07:09 runpilot2-wrapper.sh
[2025-10-12 09:07:49] -rw-r--r--. 1 boinc boinc       100 Oct 12 09:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 09:07:49] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 09:01 run_atlas
[2025-10-12 09:07:49] -rw-r--r--. 1 boinc boinc       105 Oct 12 09:01 job.xml
[2025-10-12 09:07:49] -rw-r--r--. 1 boinc boinc      6594 Oct 12 09:01 init_data.xml
[2025-10-12 09:07:49] -rw-r--r--. 2 boinc boinc 220302997 Oct 12 09:01 EVNT.46676267._004213.pool.root.1
[2025-10-12 09:07:49] -rw-r--r--. 2 boinc boinc     15120 Oct 12 09:01 start_atlas.sh
[2025-10-12 09:07:49] drwxrwx--x. 2 boinc boinc      4096 Oct 12 09:01 shared
[2025-10-12 09:07:49] -rw-r--r--. 2 boinc boinc    569682 Oct 12 09:01 input.tar.gz
[2025-10-12 09:07:49] -rw-r--r--. 1 boinc boinc         0 Oct 12 09:01 boinc_lockfile
[2025-10-12 09:07:49] -rw-r--r--. 1 boinc boinc      2550 Oct 12 09:02 pandaJob.out
[2025-10-12 09:07:49] -rw-------. 1 boinc boinc    975528 Oct 12 09:02 agis_schedconf.cvmfs.json
[2025-10-12 09:07:49] -rw-------. 1 boinc boinc   1560580 Oct 12 09:02 agis_ddmendpoints.agis.ALL.json
[2025-10-12 09:07:49] drwx------. 5 boinc boinc      4096 Oct 12 09:02 pilot3
[2025-10-12 09:07:49] -rw-r--r--. 1 boinc boinc       524 Oct 12 09:04 boinc_task_state.xml
[2025-10-12 09:07:49] -rw-------. 1 boinc boinc       957 Oct 12 09:04 memory_monitor_summary.json
[2025-10-12 09:07:49] -rw-------. 1 boinc boinc     22215 Oct 12 09:04 log.46676269._080266.job.log.tgz.1
[2025-10-12 09:07:49] -rw-------. 1 boinc boinc        95 Oct 12 09:06 pilot_heartbeat.json
[2025-10-12 09:07:49] -rw-------. 1 boinc boinc      8385 Oct 12 09:07 heartbeat.json
[2025-10-12 09:07:49] -rw-------. 1 boinc boinc      4823 Oct 12 09:07 pilotlog.txt
[2025-10-12 09:07:49] -rw-r--r--. 1 boinc boinc        23 Oct 12 09:07 wrapper_checkpoint.txt
[2025-10-12 09:07:49] -rw-r--r--. 1 boinc boinc      8192 Oct 12 09:07 boinc_mmap_file
[2025-10-12 09:07:49] -rw-------. 1 boinc boinc     93887 Oct 12 09:07 log.46676269._080266.job.log.1
[2025-10-12 09:07:49] -rw-------. 1 boinc boinc       188 Oct 12 09:07 output.list
[2025-10-12 09:07:49] -rw-r--r--. 1 boinc boinc       620 Oct 12 09:07 runtime_log
[2025-10-12 09:07:49] -rw-------. 1 boinc boinc    133120 Oct 12 09:07 result.tar.gz
[2025-10-12 09:07:49] -rw-r--r--. 1 boinc boinc      8528 Oct 12 09:07 runtime_log.err
[2025-10-12 09:07:49] -rw-------. 1 boinc boinc       643 Oct 12 09:07 nVEODmYwBS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmG3TMDmASTBym.diag
[2025-10-12 09:07:49] -rw-r--r--. 1 boinc boinc     21381 Oct 12 09:07 stderr.txt
[2025-10-12 09:07:49] No HITS result produced
[2025-10-12 09:07:49]  *** Contents of shared directory: ***
[2025-10-12 09:07:49] total 215848
[2025-10-12 09:07:49] -rw-r--r--. 2 boinc boinc 220302997 Oct 12 09:01 ATLAS.root_0
[2025-10-12 09:07:49] -rw-r--r--. 2 boinc boinc     15120 Oct 12 09:01 start_atlas.sh
[2025-10-12 09:07:49] -rw-r--r--. 2 boinc boinc    569682 Oct 12 09:01 input.tar.gz
[2025-10-12 09:07:49] -rw-------. 1 boinc boinc    133120 Oct 12 09:07 result.tar.gz
09:07:50 (1722620): run_atlas exited; CPU time 30.513756
09:07:50 (1722620): called boinc_finish(0)

</stderr_txt>
]]>

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