Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
19:16:43 (6180): wrapper (7.7.26015): starting
19:16:43 (6180): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 19:16:43] Arguments: --nthreads 8
[2025-10-12 19:16:43] Threads: 8
[2025-10-12 19:16:43] Checking for CVMFS
[2025-10-12 19:16:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 19:16:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 19:16:43] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 19:16:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 19:16:43] 2.11.0.0 4686 1038 62164 151629 1 9 1875954 4096001 2751 130560 0 588358 98.882 704591 936 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2025-10-12 19:16:43] CVMFS is ok
[2025-10-12 19:16:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 19:16:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 19:16:43] Further information can be found at the LHC@home message board.
[2025-10-12 19:16:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 19:16:43] Checking for apptainer binary...
[2025-10-12 19:16:43] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2025-10-12 19:16:43] apptainer is not installed, using version from CVMFS
[2025-10-12 19:16:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 19:16:44] WARNING: Environment variable TMPDIR already has value [/tmp/job_10519394/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node019
[2025-10-12 19:16:44] apptainer works
[2025-10-12 19:16:44] Set ATHENA_PROC_NUMBER=8
[2025-10-12 19:16:44] Set ATHENA_CORE_NUMBER=8
[2025-10-12 19:16:44] Starting ATLAS job with PandaID=6838200002
[2025-10-12 19:16:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_10519394/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 20:08:01]  *** The last 200 lines of the pilot log: ***
[2025-10-12 20:08:01]  mtime=0
[2025-10-12 20:08:01]  protocol_id=None
[2025-10-12 20:08:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 20:08:01]  replicas=None
[2025-10-12 20:08:01]  scope=mc23_13p6TeV
[2025-10-12 20:08:01]  status=None
[2025-10-12 20:08:01]  status_code=0
[2025-10-12 20:08:01]  storage_token=
[2025-10-12 20:08:01]  surl=/tmp/job_10519394/atlas/pilot/slots/0/PanDA_Pilot-6838200002/log.46676269._053753.job.log.tgz.1
[2025-10-12 20:08:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/be/log.46676269._053753.job.log.tgz.1
[2025-10-12 20:08:01]  workdir=None
[2025-10-12 20:08:01] ]
[2025-10-12 20:08:01] 2025-10-12 18:07:13,592 | INFO     | transferring file log.46676269._053753.job.log.tgz.1 from /tmp/job_10519394/atlas/pilot/slots/0/PanDA_Pilot-6838200002/log.46676269._053753.job.log.tgz.1 to /tmp/j
[2025-10-12 20:08:01] 2025-10-12 18:07:13,592 | INFO     | executing command: /usr/bin/env mv /tmp/job_10519394/atlas/pilot/slots/0/PanDA_Pilot-6838200002/log.46676269._053753.job.log.tgz.1 /tmp/job_10519394/atlas/pilot/sl
[2025-10-12 20:08:01] 2025-10-12 18:07:13,603 | INFO     | adding to output.list: log.46676269._053753.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/be/log.46676269._053753.job.log.tg
[2025-10-12 20:08:01] 2025-10-12 18:07:13,603 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 20:08:01] 2025-10-12 18:07:13,603 | INFO     | summary of transferred files:
[2025-10-12 20:08:01] 2025-10-12 18:07:13,603 | INFO     |  -- lfn=log.46676269._053753.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 20:08:01] 2025-10-12 18:07:13,603 | INFO     | stage-out finished correctly
[2025-10-12 20:08:01] 2025-10-12 18:07:13,654 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 20:08:01] 2025-10-12 18:07:14,452 | INFO     | time since job start (3024s) is within the limit (172800.0s)
[2025-10-12 20:08:01] 2025-10-12 18:07:15,977 | INFO     | monitor loop #223: job 0:6838200002 is in state 'finished'
[2025-10-12 20:08:01] 2025-10-12 18:07:15,977 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 20:08:01] 2025-10-12 18:07:16,161 | INFO     | job 6838200002 has state=finished
[2025-10-12 20:08:01] 2025-10-12 18:07:16,161 | INFO     | preparing for final server update for job 6838200002 in state='finished'
[2025-10-12 20:08:01] 2025-10-12 18:07:16,161 | INFO     | this job has now completed (state=finished)
[2025-10-12 20:08:01] 2025-10-12 18:07:16,161 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 20:08:01] 2025-10-12 18:07:16,161 | INFO     | log transfer has been attempted: DONE
[2025-10-12 20:08:01] 2025-10-12 18:07:16,161 | INFO     | job 6838200002 has finished - writing final server update
[2025-10-12 20:08:01] 2025-10-12 18:07:16,161 | INFO     | total number of processed events: 400 (read)
[2025-10-12 20:08:01] 2025-10-12 18:07:16,162 | INFO     | executing command: lscpu
[2025-10-12 20:08:01] 2025-10-12 18:07:16,204 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 20:08:01] 2025-10-12 18:07:16,457 | INFO     | time since job start (3026s) is within the limit (172800.0s)
[2025-10-12 20:08:01] 2025-10-12 18:07:18,407 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 20:08:01] 2025-10-12 18:07:18,416 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2558.1833515625
[2025-10-12 20:08:01] 2025-10-12 18:07:18,427 | INFO     | using path: /tmp/job_10519394/atlas/pilot/slots/0/PanDA_Pilot-6838200002/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 20:08:01] 2025-10-12 18:07:18,427 | INFO     | extracted standard info from prmon json
[2025-10-12 20:08:01] 2025-10-12 18:07:18,427 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 20:08:01] 2025-10-12 18:07:18,427 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 20:08:01] 2025-10-12 18:07:18,427 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 20:08:01] 2025-10-12 18:07:18,427 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 20:08:01] 2025-10-12 18:07:18,428 | INFO     | fitting pss+swap vs Time
[2025-10-12 20:08:01] 2025-10-12 18:07:18,428 | INFO     | sum of square deviations: 24640462.0
[2025-10-12 20:08:01] 2025-10-12 18:07:18,428 | INFO     | sum of deviations: -2089033633.0
[2025-10-12 20:08:01] 2025-10-12 18:07:18,428 | INFO     | mean x: 1760291015.0
[2025-10-12 20:08:01] 2025-10-12 18:07:18,429 | INFO     | mean y: 2600231.7441860465
[2025-10-12 20:08:01] 2025-10-12 18:07:18,429 | INFO     | -- intersect: 149241162974.71173
[2025-10-12 20:08:01] 2025-10-12 18:07:18,429 | INFO     | intersect: 149241162974.71173
[2025-10-12 20:08:01] 2025-10-12 18:07:18,429 | INFO     | chi2: 0.006823473809187356
[2025-10-12 20:08:01] 2025-10-12 18:07:18,429 | INFO     | -- intersect: 149241162974.71173
[2025-10-12 20:08:01] 2025-10-12 18:07:18,429 | INFO     | current memory leak: -84.78 B/s (using 43 data points, chi2=0.01)
[2025-10-12 20:08:01] 2025-10-12 18:07:18,429 | INFO     | could have reported an average CPU frequency of 2534 MHz (5 samples)
[2025-10-12 20:08:01] 2025-10-12 18:07:18,429 | INFO     | ..............................
[2025-10-12 20:08:01] 2025-10-12 18:07:18,429 | INFO     | . Timing measurements:
[2025-10-12 20:08:01] 2025-10-12 18:07:18,429 | INFO     | . get job = 0 s
[2025-10-12 20:08:01] 2025-10-12 18:07:18,429 | INFO     | . initial setup = 1 s
[2025-10-12 20:08:01] 2025-10-12 18:07:18,429 | INFO     | . payload setup = 2 s
[2025-10-12 20:08:01] 2025-10-12 18:07:18,429 | INFO     | . stage-in = 0 s
[2025-10-12 20:08:01] 2025-10-12 18:07:18,429 | INFO     | . payload execution = 3003 s
[2025-10-12 20:08:01] 2025-10-12 18:07:18,429 | INFO     | . stage-out = 0 s
[2025-10-12 20:08:01] 2025-10-12 18:07:18,429 | INFO     | . log creation = 0 s
[2025-10-12 20:08:01] 2025-10-12 18:07:18,429 | INFO     | ..............................
[2025-10-12 20:08:01] 2025-10-12 18:07:18,463 | INFO     | time since job start (3028s) is within the limit (172800.0s)
[2025-10-12 20:08:01] 2025-10-12 18:07:18,854 | INFO     | 
[2025-10-12 20:08:01] 2025-10-12 18:07:18,854 | INFO     | job summary report
[2025-10-12 20:08:01] 2025-10-12 18:07:18,854 | INFO     | --------------------------------------------------
[2025-10-12 20:08:01] 2025-10-12 18:07:18,854 | INFO     | PanDA job id: 6838200002
[2025-10-12 20:08:01] 2025-10-12 18:07:18,854 | INFO     | task id: 46676269
[2025-10-12 20:08:01] 2025-10-12 18:07:18,854 | INFO     | errors: (none)
[2025-10-12 20:08:01] 2025-10-12 18:07:18,854 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 20:08:01] 2025-10-12 18:07:18,854 | INFO     | pilot state: finished 
[2025-10-12 20:08:01] 2025-10-12 18:07:18,854 | INFO     | transexitcode: 0
[2025-10-12 20:08:01] 2025-10-12 18:07:18,854 | INFO     | exeerrorcode: 0
[2025-10-12 20:08:01] 2025-10-12 18:07:18,854 | INFO     | exeerrordiag: 
[2025-10-12 20:08:01] 2025-10-12 18:07:18,854 | INFO     | exitcode: 0
[2025-10-12 20:08:01] 2025-10-12 18:07:18,854 | INFO     | exitmsg: OK
[2025-10-12 20:08:01] 2025-10-12 18:07:18,854 | INFO     | cpuconsumptiontime: 22041 s
[2025-10-12 20:08:01] 2025-10-12 18:07:18,854 | INFO     | nevents: 400
[2025-10-12 20:08:01] 2025-10-12 18:07:18,854 | INFO     | neventsw: 0
[2025-10-12 20:08:01] 2025-10-12 18:07:18,854 | INFO     | pid: 19550
[2025-10-12 20:08:01] 2025-10-12 18:07:18,855 | INFO     | pgrp: 19550
[2025-10-12 20:08:01] 2025-10-12 18:07:18,855 | INFO     | corecount: 8
[2025-10-12 20:08:01] 2025-10-12 18:07:18,855 | INFO     | event service: False
[2025-10-12 20:08:01] 2025-10-12 18:07:18,855 | INFO     | sizes: {0: 2348983, 2: 2349245, 11: 2349273, 3009: 2374766, 3010: 2383850, 3015: 2384020}
[2025-10-12 20:08:01] 2025-10-12 18:07:18,855 | INFO     | --------------------------------------------------
[2025-10-12 20:08:01] 2025-10-12 18:07:18,855 | INFO     | 
[2025-10-12 20:08:01] 2025-10-12 18:07:18,855 | INFO     | executing command: ls -lF /tmp/job_10519394/atlas/pilot/slots/0
[2025-10-12 20:08:01] 2025-10-12 18:07:18,866 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 20:08:01] 2025-10-12 18:07:18,866 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 20:08:01] 2025-10-12 18:07:18,866 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 20:08:01] 2025-10-12 18:07:18,866 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 20:08:01] 2025-10-12 18:07:18,866 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 20:08:01] 2025-10-12 18:07:18,866 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 20:08:01] 2025-10-12 18:07:18,866 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 20:08:01] 2025-10-12 18:07:18,866 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 20:08:01] 2025-10-12 18:07:18,866 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 20:08:01] 2025-10-12 18:07:18,866 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 20:08:01] 2025-10-12 18:07:18,866 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 20:08:01] 2025-10-12 18:07:18,866 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 20:08:01] 2025-10-12 18:07:18,866 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 20:08:01] 2025-10-12 18:07:18,866 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 20:08:01] 2025-10-12 18:07:18,866 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 20:08:01] 2025-10-12 18:07:18,866 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 20:08:01] 2025-10-12 18:07:18,866 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 20:08:01] 2025-10-12 18:07:18,866 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 20:08:01] 2025-10-12 18:07:18,866 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 20:08:01] 2025-10-12 18:07:18,866 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 20:08:01] 2025-10-12 18:07:18,867 | INFO     | job 6838200002 has completed (purged errors)
[2025-10-12 20:08:01] 2025-10-12 18:07:18,867 | INFO     | overall cleanup function is called
[2025-10-12 20:08:01] 2025-10-12 18:07:19,872 | INFO     | --- collectZombieJob: --- 10, [19550]
[2025-10-12 20:08:01] 2025-10-12 18:07:19,872 | INFO     | zombie collector waiting for pid 19550
[2025-10-12 20:08:01] 2025-10-12 18:07:19,872 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 20:08:01] 2025-10-12 18:07:19,873 | INFO     | collected zombie processes
[2025-10-12 20:08:01] 2025-10-12 18:07:19,873 | INFO     | will attempt to kill all subprocesses of pid=19550
[2025-10-12 20:08:01] 2025-10-12 18:07:20,049 | INFO     | process IDs to be killed: [19550] (in reverse order)
[2025-10-12 20:08:01] 2025-10-12 18:07:20,101 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 20:08:01] 2025-10-12 18:07:20,101 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 20:08:01] 2025-10-12 18:07:20,109 | INFO     | did not find any defunct processes belonging to 19550
[2025-10-12 20:08:01] 2025-10-12 18:07:20,114 | INFO     | did not find any defunct processes belonging to 19550
[2025-10-12 20:08:01] 2025-10-12 18:07:20,114 | INFO     | ready for new job
[2025-10-12 20:08:01] 2025-10-12 18:07:20,114 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 20:08:01] 2025-10-12 18:07:20,114 | INFO     | ***************************************
[2025-10-12 20:08:01] 2025-10-12 18:07:20,115 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 20:08:01] 2025-10-12 18:07:20,115 | INFO     | ***************************************
[2025-10-12 20:08:01] 2025-10-12 18:07:20,115 | INFO     | 
[2025-10-12 20:08:01] 2025-10-12 18:07:20,130 | INFO     | architecture information:
[2025-10-12 20:08:01] 2025-10-12 18:07:20,130 | INFO     | executing command: cat /etc/os-release
[2025-10-12 20:08:01] 2025-10-12 18:07:20,136 | INFO     | cat /etc/os-release:
[2025-10-12 20:08:01] NAME="CentOS Linux"
[2025-10-12 20:08:01] VERSION="7 (Core)"
[2025-10-12 20:08:01] ID="centos"
[2025-10-12 20:08:01] ID_LIKE="rhel fedora"
[2025-10-12 20:08:01] VERSION_ID="7"
[2025-10-12 20:08:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 20:08:01] ANSI_COLOR="0;31"
[2025-10-12 20:08:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 20:08:01] HOME_URL="https://www.centos.org/"
[2025-10-12 20:08:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 20:08:01] 
[2025-10-12 20:08:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 20:08:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 20:08:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 20:08:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 20:08:01] 
[2025-10-12 20:08:01] 2025-10-12 18:07:20,136 | INFO     | ***************************************
[2025-10-12 20:08:01] 2025-10-12 18:07:20,639 | INFO     | executing command: df -mP /tmp/job_10519394/atlas/pilot/slots/0
[2025-10-12 20:08:01] 2025-10-12 18:07:20,646 | INFO     | sufficient remaining disk space (226768191488 B)
[2025-10-12 20:08:01] 2025-10-12 18:07:20,647 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 20:08:01] 2025-10-12 18:07:20,647 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 20:08:01] 2025-10-12 18:07:20,647 | INFO     | update_server=False
[2025-10-12 20:08:01] 2025-10-12 18:07:20,647 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 20:08:01] 2025-10-12 18:07:20,647 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 20:08:01] 2025-10-12 18:07:20,873 | INFO     | all job control threads have been joined
[2025-10-12 20:08:01] 2025-10-12 18:07:20,985 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 20:08:01] 2025-10-12 18:07:20,985 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 20:08:01] 2025-10-12 18:07:20,985 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:08:01] 2025-10-12 18:07:20,985 | INFO     | will abort loop
[2025-10-12 20:08:01] 2025-10-12 18:07:21,038 | INFO     | all data control threads have been joined
[2025-10-12 20:08:01] 2025-10-12 18:07:21,192 | INFO     | all payload control threads have been joined
[2025-10-12 20:08:01] 2025-10-12 18:07:21,652 | INFO     | [job] retrieve thread has finished
[2025-10-12 20:08:01] 2025-10-12 18:07:21,664 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 20:08:01] 2025-10-12 18:07:21,878 | INFO     | [job] control thread has finished
[2025-10-12 20:08:01] 2025-10-12 18:07:21,921 | INFO     | [payload] validate_post thread has finished
[2025-10-12 20:08:01] 2025-10-12 18:07:21,990 | INFO     | [job] job monitor thread has finished
[2025-10-12 20:08:01] 2025-10-12 18:07:22,040 | INFO     | [data] control thread has finished
[2025-10-12 20:08:01] 2025-10-12 18:07:22,046 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 20:08:01] 2025-10-12 18:07:22,197 | INFO     | [payload] control thread has finished
[2025-10-12 20:08:01] 2025-10-12 18:07:22,424 | INFO     | [payload] failed_post thread has finished
[2025-10-12 20:08:01] 2025-10-12 18:07:22,453 | INFO     | [data] copytool_in thread has finished
[2025-10-12 20:08:01] 2025-10-12 18:07:22,875 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 20:08:01] 2025-10-12 18:07:23,046 | INFO     | [job] validate thread has finished
[2025-10-12 20:08:01] 2025-10-12 18:07:23,051 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 20:08:01] 2025-10-12 18:07:23,072 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 20:08:01] 2025-10-12 18:07:23,492 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:08:01] 2025-10-12 18:07:23,670 | INFO     | [data] copytool_out thread has finished
[2025-10-12 20:08:01] 2025-10-12 18:07:24,497 | INFO     | [job] queue monitor thread has finished
[2025-10-12 20:08:01] 2025-10-12 18:07:24,652 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 20:08:01] 2025-10-12 18:07:51,750 | INFO     | PID=11079 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 20:08:01] 2025-10-12 18:07:51,750 | INFO     | .. there are 4 such processes running
[2025-10-12 20:08:01] 2025-10-12 18:07:51,750 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 20:08:01] 2025-10-12 18:07:51,750 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 20:08:01] 2025-10-12 18:07:51,750 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 20:08:01] 2025-10-12 18:07:54,480 | INFO     | [monitor] cgroup control has ended
[2025-10-12 20:08:01] 2025-10-12 18:07:56,291 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456058365696)>']
[2025-10-12 20:08:01] 2025-10-12 18:07:56,775 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 20:08:01] 2025-10-12 18:07:56,775 | INFO     | [monitor] control thread has ended
[2025-10-12 20:08:01] 2025-10-12 18:08:01,316 | INFO     | all workflow threads have been joined
[2025-10-12 20:08:01] 2025-10-12 18:08:01,316 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 20:08:01] 2025-10-12 18:08:01,316 | INFO     | traces error code: 0
[2025-10-12 20:08:01] 2025-10-12 18:08:01,317 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 20:08:01] 2025-10-12 18:08:01,377 [wrapper] ==== pilot stdout END ====
[2025-10-12 20:08:01] 2025-10-12 18:08:01,379 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 20:08:01] 2025-10-12 18:08:01,380 [wrapper] pilotpid: 11079
[2025-10-12 20:08:01] 2025-10-12 18:08:01,382 [wrapper] Pilot exit status: 0
[2025-10-12 20:08:01] 2025-10-12 18:08:01,387 [wrapper] pandaids: 6838200002
[2025-10-12 20:08:01] 2025-10-12 18:08:01,423 [wrapper] cleanup supervisor_pilot  6621 11080
[2025-10-12 20:08:01] 2025-10-12 18:08:01,424 [wrapper] Test setup, not cleaning
[2025-10-12 20:08:01] 2025-10-12 18:08:01,426 [wrapper] apfmon messages muted
[2025-10-12 20:08:01] 2025-10-12 18:08:01,427 [wrapper] ==== wrapper stdout END ====
[2025-10-12 20:08:01] 2025-10-12 18:08:01,428 [wrapper] ==== wrapper stderr END ====
[2025-10-12 20:08:01]  *** Error codes and diagnostics ***
[2025-10-12 20:08:01]     "exeErrorCode": 0,
[2025-10-12 20:08:01]     "exeErrorDiag": "",
[2025-10-12 20:08:01]     "pilotErrorCode": 0,
[2025-10-12 20:08:01]     "pilotErrorDiag": "",
[2025-10-12 20:08:01]  *** Listing of results directory ***
[2025-10-12 20:08:01] total 412340
[2025-10-12 20:08:01] -rw------- 1 mf493845 unix-user    557409 Oct 11 09:43 pilot3.tar.gz
[2025-10-12 20:08:01] -rwx------ 1 mf493845 unix-user     36292 Oct 11 09:46 runpilot2-wrapper.sh
[2025-10-12 20:08:01] -rw------- 1 mf493845 unix-user      5112 Oct 11 09:46 queuedata.json
[2025-10-12 20:08:01] -rw------- 1 mf493845 unix-user       100 Oct 12 18:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 20:08:01] -rwxr-xr-x 1 mf493845 unix-user      7986 Oct 12 18:20 run_atlas
[2025-10-12 20:08:01] -rw------- 1 mf493845 unix-user       105 Oct 12 18:20 job.xml
[2025-10-12 20:08:01] -rw-r--r-- 2 mf493845 unix-user     15120 Oct 12 19:16 start_atlas.sh
[2025-10-12 20:08:01] drwxrwx--x 2 mf493845 unix-user       100 Oct 12 19:16 shared
[2025-10-12 20:08:01] -rw-r--r-- 2 mf493845 unix-user    569677 Oct 12 19:16 input.tar.gz
[2025-10-12 20:08:01] -rw------- 1 mf493845 unix-user      6393 Oct 12 19:16 init_data.xml
[2025-10-12 20:08:01] -rw-r--r-- 2 mf493845 unix-user 221600631 Oct 12 19:16 EVNT.46676267._002157.pool.root.1
[2025-10-12 20:08:01] -rw------- 1 mf493845 unix-user         0 Oct 12 19:16 boinc_setup_complete
[2025-10-12 20:08:01] -rw------- 1 mf493845 unix-user      8192 Oct 12 19:16 boinc_mmap_file
[2025-10-12 20:08:01] -rw------- 1 mf493845 unix-user         0 Oct 12 19:16 boinc_lockfile
[2025-10-12 20:08:01] -rw------- 1 mf493845 unix-user      2550 Oct 12 19:16 pandaJob.out
[2025-10-12 20:08:01] -rw------- 1 mf493845 unix-user    975528 Oct 12 19:16 agis_schedconf.cvmfs.json
[2025-10-12 20:08:01] -rw------- 1 mf493845 unix-user   1560580 Oct 12 19:16 agis_ddmendpoints.agis.ALL.json
[2025-10-12 20:08:01] drwx------ 5 mf493845 unix-user       440 Oct 12 19:16 pilot3
[2025-10-12 20:08:01] -rw------- 1 mf493845 unix-user 195200494 Oct 12 20:06 HITS.46676269._053753.pool.root.1
[2025-10-12 20:08:01] -rw------- 1 mf493845 unix-user        95 Oct 12 20:06 pilot_heartbeat.json
[2025-10-12 20:08:01] -rw------- 1 mf493845 unix-user      1021 Oct 12 20:07 memory_monitor_summary.json
[2025-10-12 20:08:01] -rw------- 1 mf493845 unix-user    305246 Oct 12 20:07 log.46676269._053753.job.log.tgz.1
[2025-10-12 20:08:01] -rw------- 1 mf493845 unix-user      7781 Oct 12 20:07 heartbeat.json
[2025-10-12 20:08:01] -rw------- 1 mf493845 unix-user      5021 Oct 12 20:08 pilotlog.txt
[2025-10-12 20:08:01] -rw------- 1 mf493845 unix-user    471084 Oct 12 20:08 log.46676269._053753.job.log.1
[2025-10-12 20:08:01] -rw------- 1 mf493845 unix-user       357 Oct 12 20:08 output.list
[2025-10-12 20:08:01] -rw------- 1 mf493845 unix-user       620 Oct 12 20:08 runtime_log
[2025-10-12 20:08:01] -rw------- 1 mf493845 unix-user    798720 Oct 12 20:08 result.tar.gz
[2025-10-12 20:08:01] -rw------- 1 mf493845 unix-user      9076 Oct 12 20:08 runtime_log.err
[2025-10-12 20:08:01] -rw------- 1 mf493845 unix-user       644 Oct 12 20:08 n7jLDm9TjR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmYURMDmeDgDMm.diag
[2025-10-12 20:08:01] -rw------- 1 mf493845 unix-user     22117 Oct 12 20:08 stderr.txt
[2025-10-12 20:08:01] HITS file was successfully produced:
[2025-10-12 20:08:01] -rw------- 1 mf493845 unix-user 195200494 Oct 12 20:06 shared/HITS.pool.root.1
[2025-10-12 20:08:01]  *** Contents of shared directory: ***
[2025-10-12 20:08:01] total 408392
[2025-10-12 20:08:01] -rw-r--r-- 2 mf493845 unix-user     15120 Oct 12 19:16 start_atlas.sh
[2025-10-12 20:08:01] -rw-r--r-- 2 mf493845 unix-user    569677 Oct 12 19:16 input.tar.gz
[2025-10-12 20:08:01] -rw-r--r-- 2 mf493845 unix-user 221600631 Oct 12 19:16 ATLAS.root_0
[2025-10-12 20:08:01] -rw------- 1 mf493845 unix-user 195200494 Oct 12 20:06 HITS.pool.root.1
[2025-10-12 20:08:01] -rw------- 1 mf493845 unix-user    798720 Oct 12 20:08 result.tar.gz
20:08:02 (6180): run_atlas exited; CPU time 22112.457960
20:08:02 (6180): called boinc_finish(0)

</stderr_txt>
]]>

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