Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:35:05 (3828755): wrapper (7.7.26015): starting
03:35:05 (3828755): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 03:35:05] Arguments: --nthreads 3
[2025-10-13 03:35:05] Threads: 3
[2025-10-13 03:35:05] Checking for CVMFS
[2025-10-13 03:35:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 03:35:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 03:35:05] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 03:35:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 03:35:05] 2.9.2.0 2254445 5207 87740 151643 3 57 30292708 36864000 0 130560 0 4136136 99.991 179699 767 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 03:35:05] CVMFS is ok
[2025-10-13 03:35:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 03:35:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 03:35:05] Further information can be found at the LHC@home message board.
[2025-10-13 03:35:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 03:35:05] Checking for apptainer binary...
[2025-10-13 03:35:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 03:35:05] Running /usr/bin/apptainer --version
[2025-10-13 03:35:05] apptainer version 1.4.1-1.1
[2025-10-13 03:35:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 03:35:05] atlasA230
[2025-10-13 03:35:05] apptainer works
[2025-10-13 03:35:05] Set ATHENA_PROC_NUMBER=3
[2025-10-13 03:35:05] Set ATHENA_CORE_NUMBER=3
[2025-10-13 03:35:05] Starting ATLAS job with PandaID=6839821918
[2025-10-13 03:35:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 04:54:44]  *** The last 200 lines of the pilot log: ***
[2025-10-13 04:54:44] 2025-10-13 02:54:13,978 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:54:44] 2025-10-13 02:54:13,978 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:54:44] 2025-10-13 02:54:13,978 | INFO     | aborting loop
[2025-10-13 04:54:44] 2025-10-13 02:54:14,087 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 04:54:44] 2025-10-13 02:54:14,181 | INFO     | all data control threads have been joined
[2025-10-13 04:54:44] 2025-10-13 02:54:14,980 | INFO     | [job] queue monitor thread has finished
[2025-10-13 04:54:44] 2025-10-13 02:54:14,983 | INFO     | [job] retrieve thread has finished
[2025-10-13 04:54:44] 2025-10-13 02:54:14,983 | INFO     | [job] job monitor thread has finished
[2025-10-13 04:54:44] 2025-10-13 02:54:15,182 | INFO     | [data] control thread has finished
[2025-10-13 04:54:44] 2025-10-13 02:54:15,279 | INFO     | all payload control threads have been joined
[2025-10-13 04:54:44] 2025-10-13 02:54:15,472 | INFO     | [payload] failed_post thread has finished
[2025-10-13 04:54:44] 2025-10-13 02:54:15,588 | INFO     | [data] copytool_in thread has finished
[2025-10-13 04:54:44] 2025-10-13 02:54:15,685 | INFO     | all job control threads have been joined
[2025-10-13 04:54:44] 2025-10-13 02:54:15,772 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 04:54:44] 2025-10-13 02:54:16,092 | INFO     | [job] validate thread has finished
[2025-10-13 04:54:44] 2025-10-13 02:54:16,093 | INFO     | [data] copytool_out thread has finished
[2025-10-13 04:54:44] 2025-10-13 02:54:16,167 | INFO     | [monitor] cgroup control has ended
[2025-10-13 04:54:44] 2025-10-13 02:54:16,230 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 04:54:44] 2025-10-13 02:54:16,232 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 04:54:44] 2025-10-13 02:54:16,285 | INFO     | [payload] control thread has finished
[2025-10-13 04:54:44] 2025-10-13 02:54:16,404 | INFO     | [payload] validate_post thread has finished
[2025-10-13 04:54:44] 2025-10-13 02:54:16,612 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 04:54:44] 2025-10-13 02:54:16,691 | INFO     | [job] control thread has finished
[2025-10-13 04:54:44] 2025-10-13 02:54:20,619 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 04:54:44] 2025-10-13 02:54:24,572 | INFO     | job.realtimelogging is not enabled
[2025-10-13 04:54:44] 2025-10-13 02:54:25,577 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 04:54:44] 2025-10-13 02:54:27,361 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140668143441728)>', '<ExcThread(monitor, started 140667292481280)>']
[2025-10-13 04:54:44] 2025-10-13 02:54:32,381 | INFO     | all workflow threads have been joined
[2025-10-13 04:54:44] 2025-10-13 02:54:32,382 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 04:54:44] 2025-10-13 02:54:32,383 | INFO     | traces error code: 0
[2025-10-13 04:54:44] 2025-10-13 02:54:32,383 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 04:54:44] 2025-10-13 02:54:44,071 | INFO     | PID=3832474 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 04:54:44] 2025-10-13 02:54:44,071 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 04:54:44] 2025-10-13 02:54:44,071 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 04:54:44] 2025-10-13 02:54:44,072 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 04:54:44] 2025-10-13 02:54:44,072 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 04:54:44] 2025-10-13 02:54:44,072 | INFO     | [monitor] control thread has ended
[2025-10-13 04:54:44] 2025-10-13 02:54:44,118 [wrapper] ==== pilot stdout END ====
[2025-10-13 04:54:44] 2025-10-13 02:54:44,120 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 04:54:44] 2025-10-13 02:54:44,122 [wrapper] pilotpid: 3832474
[2025-10-13 04:54:44] 2025-10-13 02:54:44,125 [wrapper] Pilot exit status: 0
[2025-10-13 04:54:44] 2025-10-13 02:54:44,132 [wrapper] pandaids: 6839821918
[2025-10-13 04:54:44] 2025-10-13 02:54:44,147 [wrapper] cleanup supervisor_pilot 3850714 3832475
[2025-10-13 04:54:44] 2025-10-13 02:54:44,150 [wrapper] Test setup, not cleaning
[2025-10-13 04:54:44] 2025-10-13 02:54:44,152 [wrapper] apfmon messages muted
[2025-10-13 04:54:44] 2025-10-13 02:54:44,154 [wrapper] ==== wrapper stdout END ====
[2025-10-13 04:54:44] 2025-10-13 02:54:44,156 [wrapper] ==== wrapper stderr END ====
[2025-10-13 04:54:44]  *** Error codes and diagnostics ***
[2025-10-13 04:54:44]     "exeErrorCode": 0,
[2025-10-13 04:54:44]     "exeErrorDiag": "",
[2025-10-13 04:54:44]     "pilotErrorCode": 0,
[2025-10-13 04:54:44]     "pilotErrorDiag": "",
[2025-10-13 04:54:44]  *** Listing of results directory ***
[2025-10-13 04:54:44] total 408804
[2025-10-13 04:54:44] -rw-r--r-- 1 boinc boinc    557409 Oct 12 11:04 pilot3.tar.gz
[2025-10-13 04:54:44] -rw-r--r-- 1 boinc boinc      5112 Oct 12 11:16 queuedata.json
[2025-10-13 04:54:44] -rwx------ 1 boinc boinc     36292 Oct 12 11:17 runpilot2-wrapper.sh
[2025-10-13 04:54:44] -rw-r--r-- 1 boinc boinc       100 Oct 13 03:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 04:54:44] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 03:35 run_atlas
[2025-10-13 04:54:44] -rw-r--r-- 1 boinc boinc       105 Oct 13 03:35 job.xml
[2025-10-13 04:54:44] -rw-r--r-- 2 boinc boinc 219922187 Oct 13 03:35 EVNT.46676267._003570.pool.root.1
[2025-10-13 04:54:44] -rw-r--r-- 2 boinc boinc    569688 Oct 13 03:35 input.tar.gz
[2025-10-13 04:54:44] -rw-r--r-- 2 boinc boinc     15120 Oct 13 03:35 start_atlas.sh
[2025-10-13 04:54:44] drwxrwx--x 2 boinc boinc      4096 Oct 13 03:35 shared
[2025-10-13 04:54:44] -rw-r--r-- 1 boinc boinc         0 Oct 13 03:35 boinc_setup_complete
[2025-10-13 04:54:44] -rw-r--r-- 1 boinc boinc      6442 Oct 13 03:35 init_data.xml
[2025-10-13 04:54:44] -rw-r--r-- 1 boinc boinc         0 Oct 13 03:35 boinc_lockfile
[2025-10-13 04:54:44] -rw-r--r-- 1 boinc boinc      2550 Oct 13 03:35 pandaJob.out
[2025-10-13 04:54:44] -rw------- 1 boinc boinc    975595 Oct 13 03:35 agis_schedconf.cvmfs.json
[2025-10-13 04:54:44] -rw------- 1 boinc boinc   1560580 Oct 13 03:35 agis_ddmendpoints.agis.ALL.json
[2025-10-13 04:54:44] drwx------ 5 boinc boinc      4096 Oct 13 03:35 pilot3
[2025-10-13 04:54:44] -rw-r--r-- 1 boinc boinc       529 Oct 13 04:53 boinc_task_state.xml
[2025-10-13 04:54:44] -rw------- 1 boinc boinc 192938692 Oct 13 04:53 HITS.46676269._075239.pool.root.1
[2025-10-13 04:54:44] -rw------- 1 boinc boinc      1034 Oct 13 04:54 memory_monitor_summary.json
[2025-10-13 04:54:44] -rw------- 1 boinc boinc    237871 Oct 13 04:54 log.46676269._075239.job.log.tgz.1
[2025-10-13 04:54:44] -rw------- 1 boinc boinc      7771 Oct 13 04:54 heartbeat.json
[2025-10-13 04:54:44] -rw-r--r-- 1 boinc boinc      8192 Oct 13 04:54 boinc_mmap_file
[2025-10-13 04:54:44] -rw-r--r-- 1 boinc boinc        27 Oct 13 04:54 wrapper_checkpoint.txt
[2025-10-13 04:54:44] -rw------- 1 boinc boinc       747 Oct 13 04:54 pilotlog.txt
[2025-10-13 04:54:44] -rw------- 1 boinc boinc        95 Oct 13 04:54 pilot_heartbeat.json
[2025-10-13 04:54:44] -rw------- 1 boinc boinc    699715 Oct 13 04:54 log.46676269._075239.job.log.1
[2025-10-13 04:54:44] -rw------- 1 boinc boinc       357 Oct 13 04:54 output.list
[2025-10-13 04:54:44] -rw-r--r-- 1 boinc boinc       620 Oct 13 04:54 runtime_log
[2025-10-13 04:54:44] -rw------- 1 boinc boinc    952320 Oct 13 04:54 result.tar.gz
[2025-10-13 04:54:44] -rw-r--r-- 1 boinc boinc      8792 Oct 13 04:54 runtime_log.err
[2025-10-13 04:54:44] -rw------- 1 boinc boinc       661 Oct 13 04:54 1BMKDmhN7R8n9Rq4apOajLDm4fhM0noT9bVof3QYDm8YTMDmNCIEFm.diag
[2025-10-13 04:54:44] -rw-r--r-- 1 boinc boinc      7291 Oct 13 04:54 stderr.txt
[2025-10-13 04:54:44] HITS file was successfully produced:
[2025-10-13 04:54:44] -rw------- 1 boinc boinc 192938692 Oct 13 04:53 shared/HITS.pool.root.1
[2025-10-13 04:54:44]  *** Contents of shared directory: ***
[2025-10-13 04:54:44] total 404700
[2025-10-13 04:54:44] -rw-r--r-- 2 boinc boinc 219922187 Oct 13 03:35 ATLAS.root_0
[2025-10-13 04:54:44] -rw-r--r-- 2 boinc boinc    569688 Oct 13 03:35 input.tar.gz
[2025-10-13 04:54:44] -rw-r--r-- 2 boinc boinc     15120 Oct 13 03:35 start_atlas.sh
[2025-10-13 04:54:44] -rw------- 1 boinc boinc 192938692 Oct 13 04:53 HITS.pool.root.1
[2025-10-13 04:54:44] -rw------- 1 boinc boinc    952320 Oct 13 04:54 result.tar.gz
04:54:45 (3828755): run_atlas exited; CPU time 13450.919412
04:54:45 (3828755): called boinc_finish(0)

</stderr_txt>
]]>

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