Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:23:19 (2894609): wrapper (7.7.26015): starting
11:23:19 (2894609): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 11:23:19] Arguments: --nthreads 8
[2025-10-12 11:23:19] Threads: 8
[2025-10-12 11:23:19] Checking for CVMFS
[2025-10-12 11:23:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 11:23:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 11:23:19] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 11:23:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 11:23:20] 2.13.2.0 128560 116151 190904 151625 1 65 29629802 39288833 6680 16776704 1 72821321 99.567 80440286 35346 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 11:23:20] CVMFS is ok
[2025-10-12 11:23:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 11:23:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 11:23:20] Further information can be found at the LHC@home message board.
[2025-10-12 11:23:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 11:23:20] Checking for apptainer binary...
[2025-10-12 11:23:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 11:23:20] Running /usr/bin/apptainer --version
[2025-10-12 11:23:20] apptainer version 1.4.3-1.el9
[2025-10-12 11:23:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 11:23:20] c-211-5.aglt2.org
[2025-10-12 11:23:20] apptainer works
[2025-10-12 11:23:20] Set ATHENA_PROC_NUMBER=8
[2025-10-12 11:23:20] Set ATHENA_CORE_NUMBER=8
[2025-10-12 11:23:20] Starting ATLAS job with PandaID=6839927945
[2025-10-12 11:23:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 13:41:58]  *** The last 200 lines of the pilot log: ***
[2025-10-12 13:41:58] 2025-10-12 17:41:06,052 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 13:41:58] 2025-10-12 17:41:06,056 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 13:41:58] 2025-10-12 17:41:06,056 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 13:41:58] 2025-10-12 17:41:06,060 | INFO     | fitting pss+swap vs Time
[2025-10-12 13:41:58] 2025-10-12 17:41:06,064 | INFO     | sum of square deviations: 762872711.9703685
[2025-10-12 13:41:58] 2025-10-12 17:41:06,065 | INFO     | sum of deviations: -12371053829.651854
[2025-10-12 13:41:58] 2025-10-12 17:41:06,065 | INFO     | mean x: 1760286755.0148149
[2025-10-12 13:41:58] 2025-10-12 17:41:06,065 | INFO     | mean y: 2559185.3259259257
[2025-10-12 13:41:58] 2025-10-12 17:41:06,066 | INFO     | -- intersect: 28548084356.44688
[2025-10-12 13:41:58] 2025-10-12 17:41:06,066 | INFO     | intersect: 28548084356.44688
[2025-10-12 13:41:58] 2025-10-12 17:41:06,066 | INFO     | chi2: 2.1704059013154313
[2025-10-12 13:41:58] 2025-10-12 17:41:06,066 | INFO     | sum of square deviations: 681206674.4692303
[2025-10-12 13:41:58] 2025-10-12 17:41:06,067 | INFO     | sum of deviations: -2882378197.4461575
[2025-10-12 13:41:58] 2025-10-12 17:41:06,067 | INFO     | mean x: 1760286602.5153847
[2025-10-12 13:41:58] 2025-10-12 17:41:06,067 | INFO     | mean y: 2576431.7230769233
[2025-10-12 13:41:58] 2025-10-12 17:41:06,068 | INFO     | -- intersect: 7450847146.774762
[2025-10-12 13:41:58] 2025-10-12 17:41:06,068 | INFO     | intersect: 7450847146.774762
[2025-10-12 13:41:58] 2025-10-12 17:41:06,072 | INFO     | chi2: 1.4973674878431653
[2025-10-12 13:41:58] 2025-10-12 17:41:06,072 | INFO     | current chi2=1.4973674878431653 (change=31.009794668561923 %)
[2025-10-12 13:41:58] 2025-10-12 17:41:06,073 | INFO     | sum of square deviations: 605587261.9680004
[2025-10-12 13:41:58] 2025-10-12 17:41:06,073 | INFO     | sum of deviations: -2006247151.1200047
[2025-10-12 13:41:58] 2025-10-12 17:41:06,073 | INFO     | mean x: 1760286450.016
[2025-10-12 13:41:58] 2025-10-12 17:41:06,074 | INFO     | mean y: 2578199.56
[2025-10-12 13:41:58] 2025-10-12 17:41:06,074 | INFO     | -- intersect: 5834222782.081548
[2025-10-12 13:41:58] 2025-10-12 17:41:06,074 | INFO     | intersect: 5834222782.081548
[2025-10-12 13:41:58] 2025-10-12 17:41:06,074 | INFO     | chi2: 1.49920576889908
[2025-10-12 13:41:58] 2025-10-12 17:41:06,074 | INFO     | current chi2=1.49920576889908 (change=-0.12276752840163924 %)
[2025-10-12 13:41:58] 2025-10-12 17:41:06,074 | INFO     | right removable region: 124
[2025-10-12 13:41:58] 2025-10-12 17:41:06,075 | INFO     | sum of square deviations: 681205454.4692303
[2025-10-12 13:41:58] 2025-10-12 17:41:06,076 | INFO     | sum of deviations: -31414988943.976917
[2025-10-12 13:41:58] 2025-10-12 17:41:06,076 | INFO     | mean x: 1760286907.5153847
[2025-10-12 13:41:58] 2025-10-12 17:41:06,076 | INFO     | mean y: 2594050.2384615387
[2025-10-12 13:41:58] 2025-10-12 17:41:06,080 | INFO     | -- intersect: 81181324160.24667
[2025-10-12 13:41:58] 2025-10-12 17:41:06,080 | INFO     | intersect: 81181324160.24667
[2025-10-12 13:41:58] 2025-10-12 17:41:06,080 | INFO     | chi2: 0.7599761371330007
[2025-10-12 13:41:58] 2025-10-12 17:41:06,081 | INFO     | current chi2=0.7599761371330007 (change=64.98460787116377 %)
[2025-10-12 13:41:58] 2025-10-12 17:41:06,081 | INFO     | sum of square deviations: 605584821.9680004
[2025-10-12 13:41:58] 2025-10-12 17:41:06,082 | INFO     | sum of deviations: -27170765536.511997
[2025-10-12 13:41:58] 2025-10-12 17:41:06,082 | INFO     | mean x: 1760287060.016
[2025-10-12 13:41:58] 2025-10-12 17:41:06,082 | INFO     | mean y: 2585406.256
[2025-10-12 13:41:58] 2025-10-12 17:41:06,082 | INFO     | -- intersect: 78981359724.31189
[2025-10-12 13:41:58] 2025-10-12 17:41:06,082 | INFO     | intersect: 78981359724.31189
[2025-10-12 13:41:58] 2025-10-12 17:41:06,082 | INFO     | chi2: 0.7475947756363179
[2025-10-12 13:41:58] 2025-10-12 17:41:06,083 | INFO     | current chi2=0.7475947756363179 (change=1.629177666471384 %)
[2025-10-12 13:41:58] 2025-10-12 17:41:06,083 | INFO     | left removable region: 20
[2025-10-12 13:41:58] 2025-10-12 17:41:06,083 | INFO     | sum of square deviations: 348761523.96153814
[2025-10-12 13:41:58] 2025-10-12 17:41:06,084 | INFO     | sum of deviations: -10149628800.769234
[2025-10-12 13:41:58] 2025-10-12 17:41:06,084 | INFO     | mean x: 1760287029.5192308
[2025-10-12 13:41:58] 2025-10-12 17:41:06,084 | INFO     | mean y: 2592651.3846153845
[2025-10-12 13:41:58] 2025-10-12 17:41:06,092 | INFO     | -- intersect: 51230319063.08369
[2025-10-12 13:41:58] 2025-10-12 17:41:06,092 | INFO     | intersect: 51230319063.08369
[2025-10-12 13:41:58] 2025-10-12 17:41:06,093 | INFO     | chi2: 0.018941759273442035
[2025-10-12 13:41:58] 2025-10-12 17:41:06,093 | INFO     | -- intersect: 51230319063.08369
[2025-10-12 13:41:58] 2025-10-12 17:41:06,093 | INFO     | current memory leak: -29.10 B/s (using 104 data points, chi2=0.02)
[2025-10-12 13:41:58] 2025-10-12 17:41:06,094 | INFO     | could have reported an average CPU frequency of 2605 MHz (8 samples)
[2025-10-12 13:41:58] 2025-10-12 17:41:06,094 | INFO     | ..............................
[2025-10-12 13:41:58] 2025-10-12 17:41:06,094 | INFO     | . Timing measurements:
[2025-10-12 13:41:58] 2025-10-12 17:41:06,094 | INFO     | . get job = 0 s
[2025-10-12 13:41:58] 2025-10-12 17:41:06,094 | INFO     | . initial setup = 3 s
[2025-10-12 13:41:58] 2025-10-12 17:41:06,094 | INFO     | . payload setup = 9 s
[2025-10-12 13:41:58] 2025-10-12 17:41:06,095 | INFO     | . stage-in = 0 s
[2025-10-12 13:41:58] 2025-10-12 17:41:06,095 | INFO     | . payload execution = 8200 s
[2025-10-12 13:41:58] 2025-10-12 17:41:06,095 | INFO     | . stage-out = 1 s
[2025-10-12 13:41:58] 2025-10-12 17:41:06,095 | INFO     | . log creation = 0 s
[2025-10-12 13:41:58] 2025-10-12 17:41:06,095 | INFO     | ..............................
[2025-10-12 13:41:58] 2025-10-12 17:41:06,404 | INFO     | 
[2025-10-12 13:41:58] 2025-10-12 17:41:06,404 | INFO     | job summary report
[2025-10-12 13:41:58] 2025-10-12 17:41:06,404 | INFO     | --------------------------------------------------
[2025-10-12 13:41:58] 2025-10-12 17:41:06,404 | INFO     | PanDA job id: 6839927945
[2025-10-12 13:41:58] 2025-10-12 17:41:06,404 | INFO     | task id: 46676269
[2025-10-12 13:41:58] 2025-10-12 17:41:06,404 | INFO     | errors: (none)
[2025-10-12 13:41:58] 2025-10-12 17:41:06,405 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 13:41:58] 2025-10-12 17:41:06,405 | INFO     | pilot state: finished 
[2025-10-12 13:41:58] 2025-10-12 17:41:06,405 | INFO     | transexitcode: 0
[2025-10-12 13:41:58] 2025-10-12 17:41:06,405 | INFO     | exeerrorcode: 0
[2025-10-12 13:41:58] 2025-10-12 17:41:06,405 | INFO     | exeerrordiag: 
[2025-10-12 13:41:58] 2025-10-12 17:41:06,405 | INFO     | exitcode: 0
[2025-10-12 13:41:58] 2025-10-12 17:41:06,405 | INFO     | exitmsg: OK
[2025-10-12 13:41:58] 2025-10-12 17:41:06,405 | INFO     | cpuconsumptiontime: 49068 s
[2025-10-12 13:41:58] 2025-10-12 17:41:06,405 | INFO     | nevents: 400
[2025-10-12 13:41:58] 2025-10-12 17:41:06,405 | INFO     | neventsw: 0
[2025-10-12 13:41:58] 2025-10-12 17:41:06,405 | INFO     | pid: 2907251
[2025-10-12 13:41:58] 2025-10-12 17:41:06,406 | INFO     | pgrp: 2907251
[2025-10-12 13:41:58] 2025-10-12 17:41:06,406 | INFO     | corecount: 8
[2025-10-12 13:41:58] 2025-10-12 17:41:06,406 | INFO     | event service: False
[2025-10-12 13:41:58] 2025-10-12 17:41:06,406 | INFO     | sizes: {0: 2348635, 1: 2348834, 2: 2348834, 7: 2349124, 12: 2349152, 8213: 2376987, 8215: 2386041, 8223: 2386179}
[2025-10-12 13:41:58] 2025-10-12 17:41:06,406 | INFO     | --------------------------------------------------
[2025-10-12 13:41:58] 2025-10-12 17:41:06,406 | INFO     | 
[2025-10-12 13:41:58] 2025-10-12 17:41:06,406 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 13:41:58] 2025-10-12 17:41:06,434 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 13:41:58] 2025-10-12 17:41:06,434 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 13:41:58] 2025-10-12 17:41:06,434 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 13:41:58] 2025-10-12 17:41:06,434 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 13:41:58] 2025-10-12 17:41:06,435 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 13:41:58] 2025-10-12 17:41:06,435 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 13:41:58] 2025-10-12 17:41:06,435 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 13:41:58] 2025-10-12 17:41:06,435 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 13:41:58] 2025-10-12 17:41:06,435 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 13:41:58] 2025-10-12 17:41:06,435 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 13:41:58] 2025-10-12 17:41:06,435 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 13:41:58] 2025-10-12 17:41:06,435 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 13:41:58] 2025-10-12 17:41:06,435 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 13:41:58] 2025-10-12 17:41:06,436 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 13:41:58] 2025-10-12 17:41:06,436 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 13:41:58] 2025-10-12 17:41:06,436 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 13:41:58] 2025-10-12 17:41:06,436 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 13:41:58] 2025-10-12 17:41:06,436 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 13:41:58] 2025-10-12 17:41:06,436 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 13:41:58] 2025-10-12 17:41:06,436 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 13:41:58] 2025-10-12 17:41:06,437 | INFO     | job 6839927945 has completed (purged errors)
[2025-10-12 13:41:58] 2025-10-12 17:41:06,437 | INFO     | overall cleanup function is called
[2025-10-12 13:41:58] 2025-10-12 17:41:07,446 | INFO     | --- collectZombieJob: --- 10, [2907251]
[2025-10-12 13:41:58] 2025-10-12 17:41:07,446 | INFO     | zombie collector waiting for pid 2907251
[2025-10-12 13:41:58] 2025-10-12 17:41:07,447 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 13:41:58] 2025-10-12 17:41:07,447 | INFO     | collected zombie processes
[2025-10-12 13:41:58] 2025-10-12 17:41:07,447 | INFO     | will attempt to kill all subprocesses of pid=2907251
[2025-10-12 13:41:58] 2025-10-12 17:41:07,915 | INFO     | process IDs to be killed: [2907251] (in reverse order)
[2025-10-12 13:41:58] 2025-10-12 17:41:08,025 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 13:41:58] 2025-10-12 17:41:08,026 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 13:41:58] 2025-10-12 17:41:08,050 | INFO     | did not find any defunct processes belonging to 2907251
[2025-10-12 13:41:58] 2025-10-12 17:41:08,073 | INFO     | did not find any defunct processes belonging to 2907251
[2025-10-12 13:41:58] 2025-10-12 17:41:08,073 | INFO     | ready for new job
[2025-10-12 13:41:58] 2025-10-12 17:41:08,073 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 13:41:58] 2025-10-12 17:41:08,075 | INFO     | ***************************************
[2025-10-12 13:41:58] 2025-10-12 17:41:08,075 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 13:41:58] 2025-10-12 17:41:08,075 | INFO     | ***************************************
[2025-10-12 13:41:58] 2025-10-12 17:41:08,076 | INFO     | 
[2025-10-12 13:41:58] 2025-10-12 17:41:08,082 | INFO     | architecture information:
[2025-10-12 13:41:58] 2025-10-12 17:41:08,086 | INFO     | executing command: cat /etc/os-release
[2025-10-12 13:41:58] 2025-10-12 17:41:08,118 | INFO     | cat /etc/os-release:
[2025-10-12 13:41:58] NAME="CentOS Linux"
[2025-10-12 13:41:58] VERSION="7 (Core)"
[2025-10-12 13:41:58] ID="centos"
[2025-10-12 13:41:58] ID_LIKE="rhel fedora"
[2025-10-12 13:41:58] VERSION_ID="7"
[2025-10-12 13:41:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 13:41:58] ANSI_COLOR="0;31"
[2025-10-12 13:41:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 13:41:58] HOME_URL="https://www.centos.org/"
[2025-10-12 13:41:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 13:41:58] 
[2025-10-12 13:41:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 13:41:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 13:41:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 13:41:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 13:41:58] 
[2025-10-12 13:41:58] 2025-10-12 17:41:08,118 | INFO     | ***************************************
[2025-10-12 13:41:58] 2025-10-12 17:41:08,624 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 13:41:58] 2025-10-12 17:41:08,652 | INFO     | sufficient remaining disk space (51826917376 B)
[2025-10-12 13:41:58] 2025-10-12 17:41:08,652 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 13:41:58] 2025-10-12 17:41:08,652 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 13:41:58] 2025-10-12 17:41:08,652 | INFO     | update_server=False
[2025-10-12 13:41:58] 2025-10-12 17:41:08,652 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 13:41:58] 2025-10-12 17:41:08,654 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:41:58] 2025-10-12 17:41:08,654 | INFO     | aborting loop
[2025-10-12 13:41:58] 2025-10-12 17:41:08,933 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 13:41:58] 2025-10-12 17:41:09,267 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 13:41:58] 2025-10-12 17:41:09,590 | INFO     | all data control threads have been joined
[2025-10-12 13:41:58] 2025-10-12 17:41:09,658 | INFO     | [job] retrieve thread has finished
[2025-10-12 13:41:58] 2025-10-12 17:41:09,660 | INFO     | [job] job monitor thread has finished
[2025-10-12 13:41:58] 2025-10-12 17:41:09,727 | INFO     | all payload control threads have been joined
[2025-10-12 13:41:58] 2025-10-12 17:41:09,751 | INFO     | all job control threads have been joined
[2025-10-12 13:41:58] 2025-10-12 17:41:10,214 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 13:41:58] 2025-10-12 17:41:10,250 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 13:41:58] 2025-10-12 17:41:10,319 | INFO     | [payload] validate_post thread has finished
[2025-10-12 13:41:58] 2025-10-12 17:41:10,582 | INFO     | [job] validate thread has finished
[2025-10-12 13:41:58] 2025-10-12 17:41:10,583 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 13:41:58] 2025-10-12 17:41:10,596 | INFO     | [data] control thread has finished
[2025-10-12 13:41:58] 2025-10-12 17:41:10,733 | INFO     | [payload] control thread has finished
[2025-10-12 13:41:58] 2025-10-12 17:41:10,747 | INFO     | [data] copytool_in thread has finished
[2025-10-12 13:41:58] 2025-10-12 17:41:10,752 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 13:41:58] 2025-10-12 17:41:10,757 | INFO     | [job] control thread has finished
[2025-10-12 13:41:58] 2025-10-12 17:41:10,940 | INFO     | [data] copytool_out thread has finished
[2025-10-12 13:41:58] 2025-10-12 17:41:11,216 | INFO     | [payload] failed_post thread has finished
[2025-10-12 13:41:58] 2025-10-12 17:41:11,419 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:41:58] 2025-10-12 17:41:12,425 | INFO     | [job] queue monitor thread has finished
[2025-10-12 13:41:58] 2025-10-12 17:41:13,275 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 13:41:58] 2025-10-12 17:41:39,097 | INFO     | PID=2898294 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 13:41:58] 2025-10-12 17:41:39,098 | INFO     | .. there are 7 such processes running
[2025-10-12 13:41:58] 2025-10-12 17:41:39,098 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 13:41:58] 2025-10-12 17:41:39,098 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 13:41:58] 2025-10-12 17:41:39,098 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 13:41:58] 2025-10-12 17:41:53,305 | INFO     | [monitor] cgroup control has ended
[2025-10-12 13:41:58] 2025-10-12 17:41:53,430 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139995596797760)>', '<ExcThread(monitor, started 139995096528640)>']
[2025-10-12 13:41:58] 2025-10-12 17:41:54,199 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 13:41:58] 2025-10-12 17:41:54,199 | INFO     | [monitor] control thread has ended
[2025-10-12 13:41:58] 2025-10-12 17:41:58,456 | INFO     | all workflow threads have been joined
[2025-10-12 13:41:58] 2025-10-12 17:41:58,456 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 13:41:58] 2025-10-12 17:41:58,457 | INFO     | traces error code: 0
[2025-10-12 13:41:58] 2025-10-12 17:41:58,457 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 13:41:58] 2025-10-12 17:41:58,654 [wrapper] ==== pilot stdout END ====
[2025-10-12 13:41:58] 2025-10-12 17:41:58,657 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 13:41:58] 2025-10-12 17:41:58,660 [wrapper] pilotpid: 2898294
[2025-10-12 13:41:58] 2025-10-12 17:41:58,662 [wrapper] Pilot exit status: 0
[2025-10-12 13:41:58] 2025-10-12 17:41:58,730 [wrapper] pandaids: 6839927945
[2025-10-12 13:41:58] 2025-10-12 17:41:58,777 [wrapper] cleanup supervisor_pilot 3170303 2898295
[2025-10-12 13:41:58] 2025-10-12 17:41:58,781 [wrapper] Test setup, not cleaning
[2025-10-12 13:41:58] 2025-10-12 17:41:58,784 [wrapper] apfmon messages muted
[2025-10-12 13:41:58] 2025-10-12 17:41:58,787 [wrapper] ==== wrapper stdout END ====
[2025-10-12 13:41:58] 2025-10-12 17:41:58,790 [wrapper] ==== wrapper stderr END ====
[2025-10-12 13:41:58]  *** Error codes and diagnostics ***
[2025-10-12 13:41:58]     "exeErrorCode": 0,
[2025-10-12 13:41:58]     "exeErrorDiag": "",
[2025-10-12 13:41:58]     "pilotErrorCode": 0,
[2025-10-12 13:41:58]     "pilotErrorDiag": "",
[2025-10-12 13:41:58]  *** Listing of results directory ***
[2025-10-12 13:41:58] total 408288
[2025-10-12 13:41:58] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 07:54 pilot3.tar.gz
[2025-10-12 13:41:58] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 07:58 queuedata.json
[2025-10-12 13:41:58] -rwx------. 1 boincer umatlas     36292 Oct 12 07:59 runpilot2-wrapper.sh
[2025-10-12 13:41:58] -rw-r--r--. 1 boincer umatlas       100 Oct 12 11:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 13:41:58] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 11:23 run_atlas
[2025-10-12 13:41:58] -rw-r--r--. 1 boincer umatlas       105 Oct 12 11:23 job.xml
[2025-10-12 13:41:58] -rw-r--r--. 2 boincer umatlas 219702524 Oct 12 11:23 EVNT.46676267._003711.pool.root.1
[2025-10-12 13:41:58] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 11:23 start_atlas.sh
[2025-10-12 13:41:58] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 11:23 shared
[2025-10-12 13:41:58] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 11:23 input.tar.gz
[2025-10-12 13:41:58] -rw-r--r--. 1 boincer umatlas         0 Oct 12 11:23 boinc_lockfile
[2025-10-12 13:41:58] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 11:23 pandaJob.out
[2025-10-12 13:41:58] -rw-------. 1 boincer umatlas    975528 Oct 12 11:23 agis_schedconf.cvmfs.json
[2025-10-12 13:41:58] -rw-------. 1 boincer umatlas   1560580 Oct 12 11:23 agis_ddmendpoints.agis.ALL.json
[2025-10-12 13:41:58] drwx------. 5 boincer umatlas      4096 Oct 12 11:23 pilot3
[2025-10-12 13:41:58] -rw-------. 1 boincer umatlas 191409089 Oct 12 13:40 HITS.46676269._077484.pool.root.1
[2025-10-12 13:41:58] -rw-r--r--. 1 boincer umatlas      6659 Oct 12 13:40 init_data.xml
[2025-10-12 13:41:58] -rw-r--r--. 1 boincer umatlas       530 Oct 12 13:40 boinc_task_state.xml
[2025-10-12 13:41:58] -rw-------. 1 boincer umatlas      1045 Oct 12 13:40 memory_monitor_summary.json
[2025-10-12 13:41:58] -rw-------. 1 boincer umatlas        95 Oct 12 13:40 pilot_heartbeat.json
[2025-10-12 13:41:58] -rw-------. 1 boincer umatlas    371015 Oct 12 13:40 log.46676269._077484.job.log.tgz.1
[2025-10-12 13:41:58] -rw-------. 1 boincer umatlas      7839 Oct 12 13:41 heartbeat.json
[2025-10-12 13:41:58] -rw-r--r--. 1 boincer umatlas        27 Oct 12 13:41 wrapper_checkpoint.txt
[2025-10-12 13:41:58] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 13:41 boinc_mmap_file
[2025-10-12 13:41:58] -rw-------. 1 boincer umatlas      4823 Oct 12 13:41 pilotlog.txt
[2025-10-12 13:41:58] -rw-------. 1 boincer umatlas   1161300 Oct 12 13:41 log.46676269._077484.job.log.1
[2025-10-12 13:41:58] -rw-------. 1 boincer umatlas       357 Oct 12 13:41 output.list
[2025-10-12 13:41:58] -rw-r--r--. 1 boincer umatlas       620 Oct 12 13:41 runtime_log
[2025-10-12 13:41:58] -rw-------. 1 boincer umatlas   1556480 Oct 12 13:41 result.tar.gz
[2025-10-12 13:41:58] -rw-r--r--. 1 boincer umatlas      8698 Oct 12 13:41 runtime_log.err
[2025-10-12 13:41:58] -rw-------. 1 boincer umatlas       651 Oct 12 13:41 ltxNDm6u9R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjnTMDmdY4oem.diag
[2025-10-12 13:41:58] -rw-r--r--. 1 boincer umatlas     20950 Oct 12 13:41 stderr.txt
[2025-10-12 13:41:58] HITS file was successfully produced:
[2025-10-12 13:41:58] -rw-------. 1 boincer umatlas 191409089 Oct 12 13:40 shared/HITS.pool.root.1
[2025-10-12 13:41:58]  *** Contents of shared directory: ***
[2025-10-12 13:41:58] total 403584
[2025-10-12 13:41:58] -rw-r--r--. 2 boincer umatlas 219702524 Oct 12 11:23 ATLAS.root_0
[2025-10-12 13:41:58] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 11:23 start_atlas.sh
[2025-10-12 13:41:58] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 11:23 input.tar.gz
[2025-10-12 13:41:58] -rw-------. 1 boincer umatlas 191409089 Oct 12 13:40 HITS.pool.root.1
[2025-10-12 13:41:58] -rw-------. 1 boincer umatlas   1556480 Oct 12 13:41 result.tar.gz
13:42:00 (2894609): run_atlas exited; CPU time 49223.350922
13:42:00 (2894609): called boinc_finish(0)

</stderr_txt>
]]>

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