Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:20:42 (539180): wrapper (7.7.26015): starting
18:20:42 (539180): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 18:20:42] Arguments: --nthreads 8
[2025-10-12 18:20:42] Threads: 8
[2025-10-12 18:20:42] Checking for CVMFS
[2025-10-12 18:20:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 18:20:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 18:20:43] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 18:20:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 18:20:44] 2.13.2.0 842134 129837 264456 151640 2 277 25177976 32935937 17270 16776704 0 169971535 99.559 196426865 30448 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 18:20:44] CVMFS is ok
[2025-10-12 18:20:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 18:20:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 18:20:45] Further information can be found at the LHC@home message board.
[2025-10-12 18:20:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 18:20:45] Checking for apptainer binary...
[2025-10-12 18:20:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 18:20:45] Running /usr/bin/apptainer --version
[2025-10-12 18:20:45] apptainer version 1.4.3-1.el9
[2025-10-12 18:20:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 18:20:46] c6-5-37-2.aglt2.org
[2025-10-12 18:20:46] apptainer works
[2025-10-12 18:20:46] Set ATHENA_PROC_NUMBER=8
[2025-10-12 18:20:46] Set ATHENA_CORE_NUMBER=8
[2025-10-12 18:20:46] Starting ATLAS job with PandaID=6839928315
[2025-10-12 18:20:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:59:51]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:59:51] 2025-10-13 03:59:05,801 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 23:59:51] 2025-10-13 03:59:05,881 | INFO     | fitting pss+swap vs Time
[2025-10-12 23:59:51] 2025-10-13 03:59:05,882 | INFO     | sum of square deviations: 10942512630.996908
[2025-10-12 23:59:51] 2025-10-13 03:59:05,900 | INFO     | sum of deviations: -12318167600.40245
[2025-10-12 23:59:51] 2025-10-13 03:59:05,900 | INFO     | mean x: 1760317870.246951
[2025-10-12 23:59:51] 2025-10-13 03:59:05,900 | INFO     | mean y: 2175122.5975609757
[2025-10-12 23:59:51] 2025-10-13 03:59:05,900 | INFO     | -- intersect: 1983794087.7209253
[2025-10-12 23:59:51] 2025-10-13 03:59:05,901 | INFO     | intersect: 1983794087.7209253
[2025-10-12 23:59:51] 2025-10-13 03:59:05,901 | INFO     | chi2: 3.913876805496524
[2025-10-12 23:59:51] 2025-10-13 03:59:05,902 | INFO     | sum of square deviations: 10449717968.687233
[2025-10-12 23:59:51] 2025-10-13 03:59:05,907 | INFO     | sum of deviations: -11615748639.81114
[2025-10-12 23:59:51] 2025-10-13 03:59:05,907 | INFO     | mean x: 1760317717.749226
[2025-10-12 23:59:51] 2025-10-13 03:59:05,907 | INFO     | mean y: 2175335.7554179565
[2025-10-12 23:59:51] 2025-10-13 03:59:05,907 | INFO     | -- intersect: 1958917919.321027
[2025-10-12 23:59:51] 2025-10-13 03:59:05,907 | INFO     | intersect: 1958917919.321027
[2025-10-12 23:59:51] 2025-10-13 03:59:05,949 | INFO     | chi2: 3.9129827590636155
[2025-10-12 23:59:51] 2025-10-13 03:59:05,949 | INFO     | current chi2=3.9129827590636155 (change=0.022842988610494518 %)
[2025-10-12 23:59:51] 2025-10-13 03:59:05,950 | INFO     | right removable region: 322
[2025-10-12 23:59:51] 2025-10-13 03:59:05,950 | INFO     | sum of square deviations: 10449648671.678038
[2025-10-12 23:59:51] 2025-10-13 03:59:05,994 | INFO     | sum of deviations: -86425502031.10214
[2025-10-12 23:59:51] 2025-10-13 03:59:05,995 | INFO     | mean x: 1760318022.755418
[2025-10-12 23:59:51] 2025-10-13 03:59:05,995 | INFO     | mean y: 2197993.20123839
[2025-10-12 23:59:51] 2025-10-13 03:59:05,995 | INFO     | -- intersect: 14561191661.89494
[2025-10-12 23:59:51] 2025-10-13 03:59:05,995 | INFO     | intersect: 14561191661.89494
[2025-10-12 23:59:51] 2025-10-13 03:59:05,995 | INFO     | chi2: 1.1409195507564207
[2025-10-12 23:59:51] 2025-10-13 03:59:05,996 | INFO     | current chi2=1.1409195507564207 (change=70.84937499427295 %)
[2025-10-12 23:59:51] 2025-10-13 03:59:05,996 | INFO     | sum of square deviations: 9971788546.279915
[2025-10-12 23:59:51] 2025-10-13 03:59:06,034 | INFO     | sum of deviations: -108918654820.0063
[2025-10-12 23:59:51] 2025-10-13 03:59:06,034 | INFO     | mean x: 1760318175.2672956
[2025-10-12 23:59:51] 2025-10-13 03:59:06,034 | INFO     | mean y: 2205152.364779874
[2025-10-12 23:59:51] 2025-10-13 03:59:06,034 | INFO     | -- intersect: 19229597190.962456
[2025-10-12 23:59:51] 2025-10-13 03:59:06,034 | INFO     | intersect: 19229597190.962456
[2025-10-12 23:59:51] 2025-10-13 03:59:06,035 | INFO     | chi2: 0.8066103073370432
[2025-10-12 23:59:51] 2025-10-13 03:59:06,035 | INFO     | current chi2=0.8066103073370432 (change=29.301736761170684 %)
[2025-10-12 23:59:51] 2025-10-13 03:59:06,036 | INFO     | sum of square deviations: 9508719395.789152
[2025-10-12 23:59:51] 2025-10-13 03:59:06,071 | INFO     | sum of deviations: -107493303290.49203
[2025-10-12 23:59:51] 2025-10-13 03:59:06,071 | INFO     | mean x: 1760318327.7795527
[2025-10-12 23:59:51] 2025-10-13 03:59:06,071 | INFO     | mean y: 2204664.485623003
[2025-10-12 23:59:51] 2025-10-13 03:59:06,072 | INFO     | -- intersect: 19902090655.40198
[2025-10-12 23:59:51] 2025-10-13 03:59:06,072 | INFO     | intersect: 19902090655.40198
[2025-10-12 23:59:51] 2025-10-13 03:59:06,072 | INFO     | chi2: 0.7789052219123019
[2025-10-12 23:59:51] 2025-10-13 03:59:06,072 | INFO     | current chi2=0.7789052219123019 (change=3.434754697867338 %)
[2025-10-12 23:59:51] 2025-10-13 03:59:06,073 | INFO     | left removable region: 30
[2025-10-12 23:59:51] 2025-10-13 03:59:06,112 | INFO     | sum of square deviations: 7720461866.082167
[2025-10-12 23:59:51] 2025-10-13 03:59:06,115 | INFO     | sum of deviations: -62294224848.50688
[2025-10-12 23:59:51] 2025-10-13 03:59:06,115 | INFO     | mean x: 1760318602.2739725
[2025-10-12 23:59:51] 2025-10-13 03:59:06,115 | INFO     | mean y: 2189556.8938356163
[2025-10-12 23:59:51] 2025-10-13 03:59:06,115 | INFO     | -- intersect: 14205702859.228323
[2025-10-12 23:59:51] 2025-10-13 03:59:06,115 | INFO     | intersect: 14205702859.228323
[2025-10-12 23:59:51] 2025-10-13 03:59:06,115 | INFO     | chi2: 0.6360904365678135
[2025-10-12 23:59:51] 2025-10-13 03:59:06,116 | INFO     | -- intersect: 14205702859.228323
[2025-10-12 23:59:51] 2025-10-13 03:59:06,116 | INFO     | current memory leak: -8.07 B/s (using 292 data points, chi2=0.64)
[2025-10-12 23:59:51] 2025-10-13 03:59:06,116 | INFO     | could have reported an average CPU frequency of 2572 MHz (14 samples)
[2025-10-12 23:59:51] 2025-10-13 03:59:06,117 | INFO     | ..............................
[2025-10-12 23:59:51] 2025-10-13 03:59:06,117 | INFO     | . Timing measurements:
[2025-10-12 23:59:51] 2025-10-13 03:59:06,117 | INFO     | . get job = 0 s
[2025-10-12 23:59:51] 2025-10-13 03:59:06,117 | INFO     | . initial setup = 7 s
[2025-10-12 23:59:51] 2025-10-13 03:59:06,117 | INFO     | . payload setup = 50 s
[2025-10-12 23:59:51] 2025-10-13 03:59:06,117 | INFO     | . stage-in = 0 s
[2025-10-12 23:59:51] 2025-10-13 03:59:06,117 | INFO     | . payload execution = 20033 s
[2025-10-12 23:59:51] 2025-10-13 03:59:06,117 | INFO     | . stage-out = 7 s
[2025-10-12 23:59:51] 2025-10-13 03:59:06,117 | INFO     | . log creation = 0 s
[2025-10-12 23:59:51] 2025-10-13 03:59:06,117 | INFO     | ..............................
[2025-10-12 23:59:51] 2025-10-13 03:59:06,629 | INFO     | 
[2025-10-12 23:59:51] 2025-10-13 03:59:06,629 | INFO     | job summary report
[2025-10-12 23:59:51] 2025-10-13 03:59:06,630 | INFO     | --------------------------------------------------
[2025-10-12 23:59:51] 2025-10-13 03:59:06,630 | INFO     | PanDA job id: 6839928315
[2025-10-12 23:59:51] 2025-10-13 03:59:06,630 | INFO     | task id: 46676269
[2025-10-12 23:59:51] 2025-10-13 03:59:06,630 | INFO     | errors: (none)
[2025-10-12 23:59:51] 2025-10-13 03:59:06,630 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:59:51] 2025-10-13 03:59:06,630 | INFO     | pilot state: finished 
[2025-10-12 23:59:51] 2025-10-13 03:59:06,630 | INFO     | transexitcode: 0
[2025-10-12 23:59:51] 2025-10-13 03:59:06,630 | INFO     | exeerrorcode: 0
[2025-10-12 23:59:51] 2025-10-13 03:59:06,630 | INFO     | exeerrordiag: 
[2025-10-12 23:59:51] 2025-10-13 03:59:06,630 | INFO     | exitcode: 0
[2025-10-12 23:59:51] 2025-10-13 03:59:06,631 | INFO     | exitmsg: OK
[2025-10-12 23:59:51] 2025-10-13 03:59:06,631 | INFO     | cpuconsumptiontime: 47612 s
[2025-10-12 23:59:51] 2025-10-13 03:59:06,631 | INFO     | nevents: 400
[2025-10-12 23:59:51] 2025-10-13 03:59:06,631 | INFO     | neventsw: 0
[2025-10-12 23:59:51] 2025-10-13 03:59:06,631 | INFO     | pid: 561087
[2025-10-12 23:59:51] 2025-10-13 03:59:06,631 | INFO     | pgrp: 561087
[2025-10-12 23:59:51] 2025-10-13 03:59:06,631 | INFO     | corecount: 8
[2025-10-12 23:59:51] 2025-10-13 03:59:06,631 | INFO     | event service: False
[2025-10-12 23:59:51] 2025-10-13 03:59:06,631 | INFO     | sizes: {0: 2348023, 1: 2348624, 2: 2348736, 3: 2348935, 4: 2348935, 14: 2348963, 25: 2349119, 36: 2349147, 41: 2349437, 47: 2349465, 20088: 2382577, 20089: 2382856
[2025-10-12 23:59:51] 2025-10-13 03:59:06,631 | INFO     | --------------------------------------------------
[2025-10-12 23:59:51] 2025-10-13 03:59:06,631 | INFO     | 
[2025-10-12 23:59:51] 2025-10-13 03:59:06,632 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 23:59:51] 2025-10-13 03:59:06,988 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:59:51] 2025-10-13 03:59:06,989 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:59:51] 2025-10-13 03:59:06,989 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:59:51] 2025-10-13 03:59:06,989 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:59:51] 2025-10-13 03:59:06,989 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:59:51] 2025-10-13 03:59:06,989 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:59:51] 2025-10-13 03:59:06,989 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:59:51] 2025-10-13 03:59:06,989 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:59:51] 2025-10-13 03:59:06,989 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:59:51] 2025-10-13 03:59:06,989 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:59:51] 2025-10-13 03:59:06,990 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:59:51] 2025-10-13 03:59:06,990 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:59:51] 2025-10-13 03:59:06,990 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:59:51] 2025-10-13 03:59:06,990 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:59:51] 2025-10-13 03:59:06,990 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:59:51] 2025-10-13 03:59:06,990 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:59:51] 2025-10-13 03:59:06,990 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:59:51] 2025-10-13 03:59:06,990 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:59:51] 2025-10-13 03:59:06,990 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:59:51] 2025-10-13 03:59:06,990 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:59:51] 2025-10-13 03:59:06,990 | INFO     | job 6839928315 has completed (purged errors)
[2025-10-12 23:59:51] 2025-10-13 03:59:06,991 | INFO     | overall cleanup function is called
[2025-10-12 23:59:51] 2025-10-13 03:59:08,097 | INFO     | --- collectZombieJob: --- 10, [561087]
[2025-10-12 23:59:51] 2025-10-13 03:59:08,097 | INFO     | zombie collector waiting for pid 561087
[2025-10-12 23:59:51] 2025-10-13 03:59:08,097 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:59:51] 2025-10-13 03:59:08,097 | INFO     | collected zombie processes
[2025-10-12 23:59:51] 2025-10-13 03:59:08,098 | INFO     | will attempt to kill all subprocesses of pid=561087
[2025-10-12 23:59:51] 2025-10-13 03:59:11,061 | INFO     | PID=547593 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 23:59:51] 2025-10-13 03:59:11,061 | INFO     | .. there are 17 such processes running
[2025-10-12 23:59:51] 2025-10-13 03:59:11,419 | INFO     | process IDs to be killed: [561087] (in reverse order)
[2025-10-12 23:59:51] 2025-10-13 03:59:11,594 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:59:51] 2025-10-13 03:59:11,594 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:59:51] 2025-10-13 03:59:11,633 | INFO     | did not find any defunct processes belonging to 561087
[2025-10-12 23:59:51] 2025-10-13 03:59:11,689 | INFO     | did not find any defunct processes belonging to 561087
[2025-10-12 23:59:51] 2025-10-13 03:59:11,689 | INFO     | ready for new job
[2025-10-12 23:59:51] 2025-10-13 03:59:11,689 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:59:51] 2025-10-13 03:59:11,694 | INFO     | ***************************************
[2025-10-12 23:59:51] 2025-10-13 03:59:11,695 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:59:51] 2025-10-13 03:59:11,695 | INFO     | ***************************************
[2025-10-12 23:59:51] 2025-10-13 03:59:11,695 | INFO     | 
[2025-10-12 23:59:51] 2025-10-13 03:59:11,711 | INFO     | architecture information:
[2025-10-12 23:59:51] 2025-10-13 03:59:11,724 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:59:51] 2025-10-13 03:59:11,811 | INFO     | cat /etc/os-release:
[2025-10-12 23:59:51] NAME="CentOS Linux"
[2025-10-12 23:59:51] VERSION="7 (Core)"
[2025-10-12 23:59:51] ID="centos"
[2025-10-12 23:59:51] ID_LIKE="rhel fedora"
[2025-10-12 23:59:51] VERSION_ID="7"
[2025-10-12 23:59:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:59:51] ANSI_COLOR="0;31"
[2025-10-12 23:59:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:59:51] HOME_URL="https://www.centos.org/"
[2025-10-12 23:59:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:59:51] 
[2025-10-12 23:59:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:59:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:59:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:59:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:59:51] 
[2025-10-12 23:59:51] 2025-10-13 03:59:11,811 | INFO     | ***************************************
[2025-10-12 23:59:51] 2025-10-13 03:59:12,314 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 23:59:51] 2025-10-13 03:59:12,381 | INFO     | sufficient remaining disk space (75191287808 B)
[2025-10-12 23:59:51] 2025-10-13 03:59:12,382 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:59:51] 2025-10-13 03:59:12,382 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:59:51] 2025-10-13 03:59:12,382 | INFO     | update_server=False
[2025-10-12 23:59:51] 2025-10-13 03:59:12,382 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:59:51] 2025-10-13 03:59:12,383 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:59:51] 2025-10-13 03:59:12,775 | INFO     | all data control threads have been joined
[2025-10-12 23:59:51] 2025-10-13 03:59:12,962 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:59:51] 2025-10-13 03:59:12,962 | INFO     | aborting loop
[2025-10-12 23:59:51] 2025-10-13 03:59:13,361 | INFO     | all job control threads have been joined
[2025-10-12 23:59:51] 2025-10-13 03:59:13,388 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:59:51] 2025-10-13 03:59:13,389 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:59:51] 2025-10-13 03:59:13,415 | INFO     | [job] validate thread has finished
[2025-10-12 23:59:51] 2025-10-13 03:59:13,416 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:59:51] 2025-10-13 03:59:13,426 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:59:51] 2025-10-13 03:59:13,432 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:59:51] 2025-10-13 03:59:13,448 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:59:51] 2025-10-13 03:59:13,500 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:59:51] 2025-10-13 03:59:13,557 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:59:51] 2025-10-13 03:59:13,677 | INFO     | all payload control threads have been joined
[2025-10-12 23:59:51] 2025-10-13 03:59:13,781 | INFO     | [data] control thread has finished
[2025-10-12 23:59:51] 2025-10-13 03:59:13,968 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:59:51] 2025-10-13 03:59:14,367 | INFO     | [job] control thread has finished
[2025-10-12 23:59:51] 2025-10-13 03:59:14,453 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:59:51] 2025-10-13 03:59:14,506 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:59:51] 2025-10-13 03:59:14,513 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:59:51] 2025-10-13 03:59:14,683 | INFO     | [payload] control thread has finished
[2025-10-12 23:59:51] 2025-10-13 03:59:15,507 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:59:51] 2025-10-13 03:59:18,462 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:59:51] 2025-10-13 03:59:42,532 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:59:51] 2025-10-13 03:59:43,304 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140576217913152)>', '<ExcThread(monitor, started 140575210727168)>']
[2025-10-12 23:59:51] 2025-10-13 03:59:43,764 | INFO     | PID=547593 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 23:59:51] 2025-10-13 03:59:43,764 | INFO     | .. there are 17 such processes running
[2025-10-12 23:59:51] 2025-10-13 03:59:43,765 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:59:51] 2025-10-13 03:59:43,765 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:59:51] 2025-10-13 03:59:43,765 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:59:51] 2025-10-13 03:59:43,765 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:59:51] 2025-10-13 03:59:43,765 | INFO     | [monitor] control thread has ended
[2025-10-12 23:59:51] 2025-10-13 03:59:48,330 | INFO     | all workflow threads have been joined
[2025-10-12 23:59:51] 2025-10-13 03:59:48,330 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:59:51] 2025-10-13 03:59:48,331 | INFO     | traces error code: 0
[2025-10-12 23:59:51] 2025-10-13 03:59:48,332 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:59:51] 2025-10-13 03:59:49,821 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:59:51] 2025-10-13 03:59:49,836 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:59:51] 2025-10-13 03:59:49,860 [wrapper] pilotpid: 547593
[2025-10-12 23:59:51] 2025-10-13 03:59:49,878 [wrapper] Pilot exit status: 0
[2025-10-12 23:59:51] 2025-10-13 03:59:50,048 [wrapper] pandaids: 6839928315
[2025-10-12 23:59:51] 2025-10-13 03:59:50,885 [wrapper] cleanup supervisor_pilot 1378053 547594
[2025-10-12 23:59:51] 2025-10-13 03:59:50,898 [wrapper] Test setup, not cleaning
[2025-10-12 23:59:51] 2025-10-13 03:59:50,913 [wrapper] apfmon messages muted
[2025-10-12 23:59:51] 2025-10-13 03:59:50,944 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:59:51] 2025-10-13 03:59:50,960 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:59:51]  *** Error codes and diagnostics ***
[2025-10-12 23:59:51]     "exeErrorCode": 0,
[2025-10-12 23:59:51]     "exeErrorDiag": "",
[2025-10-12 23:59:51]     "pilotErrorCode": 0,
[2025-10-12 23:59:51]     "pilotErrorDiag": "",
[2025-10-12 23:59:51]  *** Listing of results directory ***
[2025-10-12 23:59:51] total 416604
[2025-10-12 23:59:51] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 07:54 pilot3.tar.gz
[2025-10-12 23:59:51] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 08:07 queuedata.json
[2025-10-12 23:59:51] -rwx------. 1 boincer umatlas     36292 Oct 12 08:08 runpilot2-wrapper.sh
[2025-10-12 23:59:51] -rw-r--r--. 1 boincer umatlas       100 Oct 12 18:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:59:51] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 18:20 run_atlas
[2025-10-12 23:59:51] -rw-r--r--. 1 boincer umatlas       105 Oct 12 18:20 job.xml
[2025-10-12 23:59:51] -rw-r--r--. 2 boincer umatlas 219540933 Oct 12 18:20 EVNT.46676267._003729.pool.root.1
[2025-10-12 23:59:51] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 18:20 shared
[2025-10-12 23:59:51] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 18:20 input.tar.gz
[2025-10-12 23:59:51] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 18:20 start_atlas.sh
[2025-10-12 23:59:51] -rw-r--r--. 1 boincer umatlas         0 Oct 12 18:20 boinc_lockfile
[2025-10-12 23:59:51] -rw-r--r--. 1 boincer umatlas      2547 Oct 12 18:20 pandaJob.out
[2025-10-12 23:59:51] -rw-------. 1 boincer umatlas    975603 Oct 12 18:21 agis_schedconf.cvmfs.json
[2025-10-12 23:59:51] drwx------. 5 boincer umatlas      4096 Oct 12 18:22 pilot3
[2025-10-12 23:59:51] -rw-r--r--. 1 boincer umatlas      6844 Oct 12 23:56 init_data.xml
[2025-10-12 23:59:51] -rw-------. 1 boincer umatlas 197256666 Oct 12 23:57 HITS.46676269._077754.pool.root.1
[2025-10-12 23:59:51] -rw-r--r--. 1 boincer umatlas       530 Oct 12 23:57 boinc_task_state.xml
[2025-10-12 23:59:51] -rw-------. 1 boincer umatlas      1043 Oct 12 23:58 memory_monitor_summary.json
[2025-10-12 23:59:51] -rw-------. 1 boincer umatlas   1560580 Oct 12 23:58 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:59:51] -rw-------. 1 boincer umatlas    513607 Oct 12 23:58 log.46676269._077754.job.log.tgz.1
[2025-10-12 23:59:51] -rw-------. 1 boincer umatlas        95 Oct 12 23:58 pilot_heartbeat.json
[2025-10-12 23:59:51] -rw-------. 1 boincer umatlas      7826 Oct 12 23:59 heartbeat.json
[2025-10-12 23:59:51] -rw-------. 1 boincer umatlas      4823 Oct 12 23:59 pilotlog.txt
[2025-10-12 23:59:51] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 23:59 boinc_mmap_file
[2025-10-12 23:59:51] -rw-r--r--. 1 boincer umatlas        28 Oct 12 23:59 wrapper_checkpoint.txt
[2025-10-12 23:59:51] -rw-------. 1 boincer umatlas   2438703 Oct 12 23:59 log.46676269._077754.job.log.1
[2025-10-12 23:59:51] -rw-------. 1 boincer umatlas       357 Oct 12 23:59 output.list
[2025-10-12 23:59:51] -rw-r--r--. 1 boincer umatlas       620 Oct 12 23:59 runtime_log
[2025-10-12 23:59:51] -rw-------. 1 boincer umatlas   2969600 Oct 12 23:59 result.tar.gz
[2025-10-12 23:59:51] -rw-r--r--. 1 boincer umatlas      8709 Oct 12 23:59 runtime_log.err
[2025-10-12 23:59:51] -rw-------. 1 boincer umatlas       657 Oct 12 23:59 BHwLDmz29R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmrqTMDmQsAfzn.diag
[2025-10-12 23:59:51] -rw-r--r--. 1 boincer umatlas     21139 Oct 12 23:59 stderr.txt
[2025-10-12 23:59:51] HITS file was successfully produced:
[2025-10-12 23:59:51] -rw-------. 1 boincer umatlas 197256666 Oct 12 23:57 shared/HITS.pool.root.1
[2025-10-12 23:59:51]  *** Contents of shared directory: ***
[2025-10-12 23:59:51] total 410512
[2025-10-12 23:59:51] -rw-r--r--. 2 boincer umatlas 219540933 Oct 12 18:20 ATLAS.root_0
[2025-10-12 23:59:51] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 18:20 input.tar.gz
[2025-10-12 23:59:51] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 18:20 start_atlas.sh
[2025-10-12 23:59:51] -rw-------. 1 boincer umatlas 197256666 Oct 12 23:57 HITS.pool.root.1
[2025-10-12 23:59:51] -rw-------. 1 boincer umatlas   2969600 Oct 12 23:59 result.tar.gz
23:59:52 (539180): run_atlas exited; CPU time 48176.630627
23:59:52 (539180): called boinc_finish(0)

</stderr_txt>
]]>

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