Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:40:52 (1323559): wrapper (7.7.26015): starting
13:40:52 (1323559): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 13:40:52] Arguments: --nthreads 9
[2025-10-12 13:40:52] Threads: 9
[2025-10-12 13:40:52] Checking for CVMFS
[2025-10-12 13:40:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 13:40:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 13:40:53] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 13:40:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 13:40:53] 2.13.2.0 4001654 129557 478308 151629 3 250 29498889 32935936 22664 16776704 25 242415276 99.584 259487295 22386 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 13:40:53] CVMFS is ok
[2025-10-12 13:40:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 13:40:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 13:40:53] Further information can be found at the LHC@home message board.
[2025-10-12 13:40:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 13:40:53] Checking for apptainer binary...
[2025-10-12 13:40:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 13:40:53] Running /usr/bin/apptainer --version
[2025-10-12 13:40:53] apptainer version 1.4.3-1.el9
[2025-10-12 13:40:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 13:40:54] c7-11-13.aglt2.org
[2025-10-12 13:40:54] apptainer works
[2025-10-12 13:41:13] Set ATHENA_PROC_NUMBER=9
[2025-10-12 13:41:13] Set ATHENA_CORE_NUMBER=9
[2025-10-12 13:41:13] Starting ATLAS job with PandaID=6839637079
[2025-10-12 13:41:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 15:42:06]  *** The last 200 lines of the pilot log: ***
[2025-10-12 15:42:06] 2025-10-12 19:41:23,900 | INFO     | fitting pss+swap vs Time
[2025-10-12 15:42:06] 2025-10-12 19:41:23,900 | INFO     | sum of square deviations: 496630787.86324817
[2025-10-12 15:42:06] 2025-10-12 19:41:23,901 | INFO     | sum of deviations: 11986368190.854698
[2025-10-12 15:42:06] 2025-10-12 19:41:23,901 | INFO     | mean x: 1760294514.1880343
[2025-10-12 15:42:06] 2025-10-12 19:41:23,901 | INFO     | mean y: 2151836.324786325
[2025-10-12 15:42:06] 2025-10-12 19:41:23,901 | INFO     | -- intersect: -42483208892.4777
[2025-10-12 15:42:06] 2025-10-12 19:41:23,908 | INFO     | intersect: -42483208892.4777
[2025-10-12 15:42:06] 2025-10-12 19:41:23,908 | INFO     | chi2: 2.115846098180219
[2025-10-12 15:42:06] 2025-10-12 19:41:23,908 | INFO     | sum of square deviations: 435636154.42857164
[2025-10-12 15:42:06] 2025-10-12 19:41:23,909 | INFO     | sum of deviations: 17209125075.285713
[2025-10-12 15:42:06] 2025-10-12 19:41:23,909 | INFO     | mean x: 1760294361.6785715
[2025-10-12 15:42:06] 2025-10-12 19:41:23,909 | INFO     | mean y: 2164343.035714286
[2025-10-12 15:42:06] 2025-10-12 19:41:23,909 | INFO     | -- intersect: -69535511838.0943
[2025-10-12 15:42:06] 2025-10-12 19:41:23,909 | INFO     | intersect: -69535511838.0943
[2025-10-12 15:42:06] 2025-10-12 19:41:23,909 | INFO     | chi2: 1.4492768095775066
[2025-10-12 15:42:06] 2025-10-12 19:41:23,909 | INFO     | current chi2=1.4492768095775066 (change=31.503675488307504 %)
[2025-10-12 15:42:06] 2025-10-12 19:41:23,909 | INFO     | sum of square deviations: 379864464.26168144
[2025-10-12 15:42:06] 2025-10-12 19:41:23,910 | INFO     | sum of deviations: 15599781507.813087
[2025-10-12 15:42:06] 2025-10-12 19:41:23,910 | INFO     | mean x: 1760294209.1869159
[2025-10-12 15:42:06] 2025-10-12 19:41:23,910 | INFO     | mean y: 2159931.0093457946
[2025-10-12 15:42:06] 2025-10-12 19:41:23,910 | INFO     | -- intersect: -72287321282.1312
[2025-10-12 15:42:06] 2025-10-12 19:41:23,910 | INFO     | intersect: -72287321282.1312
[2025-10-12 15:42:06] 2025-10-12 19:41:23,910 | INFO     | chi2: 1.4514704972377916
[2025-10-12 15:42:06] 2025-10-12 19:41:23,910 | INFO     | current chi2=1.4514704972377916 (change=-0.15136429740599747 %)
[2025-10-12 15:42:06] 2025-10-12 19:41:23,910 | INFO     | right removable region: 106
[2025-10-12 15:42:06] 2025-10-12 19:41:23,911 | INFO     | sum of square deviations: 435651282.42857164
[2025-10-12 15:42:06] 2025-10-12 19:41:23,911 | INFO     | sum of deviations: -3705204531.4285717
[2025-10-12 15:42:06] 2025-10-12 19:41:23,911 | INFO     | mean x: 1760294666.6785715
[2025-10-12 15:42:06] 2025-10-12 19:41:23,911 | INFO     | mean y: 2190390.5714285714
[2025-10-12 15:42:06] 2025-10-12 19:41:23,911 | INFO     | -- intersect: 14973457637.320238
[2025-10-12 15:42:06] 2025-10-12 19:41:23,911 | INFO     | intersect: 14973457637.320238
[2025-10-12 15:42:06] 2025-10-12 19:41:23,911 | INFO     | chi2: 0.7327291904154334
[2025-10-12 15:42:06] 2025-10-12 19:41:23,937 | INFO     | current chi2=0.7327291904154334 (change=65.36944766230239 %)
[2025-10-12 15:42:06] 2025-10-12 19:41:23,937 | INFO     | sum of square deviations: 379867392.26168144
[2025-10-12 15:42:06] 2025-10-12 19:41:23,938 | INFO     | sum of deviations: -4204181651.6822424
[2025-10-12 15:42:06] 2025-10-12 19:41:23,938 | INFO     | mean x: 1760294819.1869159
[2025-10-12 15:42:06] 2025-10-12 19:41:23,938 | INFO     | mean y: 2191680.0841121497
[2025-10-12 15:42:06] 2025-10-12 19:41:23,938 | INFO     | -- intersect: 19484251291.24139
[2025-10-12 15:42:06] 2025-10-12 19:41:23,938 | INFO     | intersect: 19484251291.24139
[2025-10-12 15:42:06] 2025-10-12 19:41:23,938 | INFO     | chi2: 0.7274221197631866
[2025-10-12 15:42:06] 2025-10-12 19:41:23,938 | INFO     | current chi2=0.7274221197631866 (change=0.724288143787181 %)
[2025-10-12 15:42:06] 2025-10-12 19:41:23,939 | INFO     | left removable region: 20
[2025-10-12 15:42:06] 2025-10-12 19:41:23,939 | INFO     | sum of square deviations: 197227625.73255822
[2025-10-12 15:42:06] 2025-10-12 19:41:23,939 | INFO     | sum of deviations: 1472639992.5
[2025-10-12 15:42:06] 2025-10-12 19:41:23,939 | INFO     | mean x: 1760294788.7093024
[2025-10-12 15:42:06] 2025-10-12 19:41:23,939 | INFO     | mean y: 2199731.5
[2025-10-12 15:42:06] 2025-10-12 19:41:23,939 | INFO     | -- intersect: -13141397646.474844
[2025-10-12 15:42:06] 2025-10-12 19:41:23,939 | INFO     | intersect: -13141397646.474844
[2025-10-12 15:42:06] 2025-10-12 19:41:23,939 | INFO     | chi2: 0.023636017356688983
[2025-10-12 15:42:06] 2025-10-12 19:41:23,940 | INFO     | -- intersect: -13141397646.474844
[2025-10-12 15:42:06] 2025-10-12 19:41:23,940 | INFO     | current memory leak: 7.47 B/s (using 86 data points, chi2=0.02)
[2025-10-12 15:42:06] 2025-10-12 19:41:23,940 | INFO     | could have reported an average CPU frequency of 3261 MHz (7 samples)
[2025-10-12 15:42:06] 2025-10-12 19:41:23,941 | INFO     | ..............................
[2025-10-12 15:42:06] 2025-10-12 19:41:23,941 | INFO     | . Timing measurements:
[2025-10-12 15:42:06] 2025-10-12 19:41:23,941 | INFO     | . get job = 0 s
[2025-10-12 15:42:06] 2025-10-12 19:41:23,941 | INFO     | . initial setup = 4 s
[2025-10-12 15:42:06] 2025-10-12 19:41:23,941 | INFO     | . payload setup = 19 s
[2025-10-12 15:42:06] 2025-10-12 19:41:23,941 | INFO     | . stage-in = 0 s
[2025-10-12 15:42:06] 2025-10-12 19:41:23,941 | INFO     | . payload execution = 7103 s
[2025-10-12 15:42:06] 2025-10-12 19:41:23,941 | INFO     | . stage-out = 2 s
[2025-10-12 15:42:06] 2025-10-12 19:41:23,941 | INFO     | . log creation = 0 s
[2025-10-12 15:42:06] 2025-10-12 19:41:23,941 | INFO     | ..............................
[2025-10-12 15:42:06] 2025-10-12 19:41:24,037 | INFO     | 
[2025-10-12 15:42:06] 2025-10-12 19:41:24,038 | INFO     | job summary report
[2025-10-12 15:42:06] 2025-10-12 19:41:24,038 | INFO     | --------------------------------------------------
[2025-10-12 15:42:06] 2025-10-12 19:41:24,038 | INFO     | PanDA job id: 6839637079
[2025-10-12 15:42:06] 2025-10-12 19:41:24,038 | INFO     | task id: 46676269
[2025-10-12 15:42:06] 2025-10-12 19:41:24,038 | INFO     | errors: (none)
[2025-10-12 15:42:06] 2025-10-12 19:41:24,038 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 15:42:06] 2025-10-12 19:41:24,065 | INFO     | pilot state: finished 
[2025-10-12 15:42:06] 2025-10-12 19:41:24,090 | INFO     | transexitcode: 0
[2025-10-12 15:42:06] 2025-10-12 19:41:24,090 | INFO     | exeerrorcode: 0
[2025-10-12 15:42:06] 2025-10-12 19:41:24,113 | INFO     | exeerrordiag: 
[2025-10-12 15:42:06] 2025-10-12 19:41:24,113 | INFO     | exitcode: 0
[2025-10-12 15:42:06] 2025-10-12 19:41:24,113 | INFO     | exitmsg: OK
[2025-10-12 15:42:06] 2025-10-12 19:41:24,113 | INFO     | cpuconsumptiontime: 34426 s
[2025-10-12 15:42:06] 2025-10-12 19:41:24,113 | INFO     | nevents: 400
[2025-10-12 15:42:06] 2025-10-12 19:41:24,113 | INFO     | neventsw: 0
[2025-10-12 15:42:06] 2025-10-12 19:41:24,113 | INFO     | pid: 1349833
[2025-10-12 15:42:06] 2025-10-12 19:41:24,113 | INFO     | pgrp: 1349833
[2025-10-12 15:42:06] 2025-10-12 19:41:24,114 | INFO     | corecount: 9
[2025-10-12 15:42:06] 2025-10-12 19:41:24,114 | INFO     | event service: False
[2025-10-12 15:42:06] 2025-10-12 19:41:24,114 | INFO     | sizes: {0: 2347978, 1: 2348834, 12: 2348834, 13: 2349124, 22: 2349180, 7127: 2376559, 7130: 2385613, 7141: 2385751}
[2025-10-12 15:42:06] 2025-10-12 19:41:24,114 | INFO     | --------------------------------------------------
[2025-10-12 15:42:06] 2025-10-12 19:41:24,114 | INFO     | 
[2025-10-12 15:42:06] 2025-10-12 19:41:24,114 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 15:42:06] 2025-10-12 19:41:24,139 | INFO     | time since job start (7178s) is within the limit (172800.0s)
[2025-10-12 15:42:06] 2025-10-12 19:41:24,154 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 15:42:06] 2025-10-12 19:41:24,154 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 15:42:06] 2025-10-12 19:41:24,154 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 15:42:06] 2025-10-12 19:41:24,154 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 15:42:06] 2025-10-12 19:41:24,154 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 15:42:06] 2025-10-12 19:41:24,154 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 15:42:06] 2025-10-12 19:41:24,154 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 15:42:06] 2025-10-12 19:41:24,155 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 15:42:06] 2025-10-12 19:41:24,155 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 15:42:06] 2025-10-12 19:41:24,155 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 15:42:06] 2025-10-12 19:41:24,155 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 15:42:06] 2025-10-12 19:41:24,155 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 15:42:06] 2025-10-12 19:41:24,155 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 15:42:06] 2025-10-12 19:41:24,155 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 15:42:06] 2025-10-12 19:41:24,155 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 15:42:06] 2025-10-12 19:41:24,155 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 15:42:06] 2025-10-12 19:41:24,155 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 15:42:06] 2025-10-12 19:41:24,155 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 15:42:06] 2025-10-12 19:41:24,156 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 15:42:06] 2025-10-12 19:41:24,156 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 15:42:06] 2025-10-12 19:41:24,156 | INFO     | job 6839637079 has completed (purged errors)
[2025-10-12 15:42:06] 2025-10-12 19:41:24,156 | INFO     | overall cleanup function is called
[2025-10-12 15:42:06] 2025-10-12 19:41:25,179 | INFO     | --- collectZombieJob: --- 10, [1349833]
[2025-10-12 15:42:06] 2025-10-12 19:41:25,179 | INFO     | zombie collector waiting for pid 1349833
[2025-10-12 15:42:06] 2025-10-12 19:41:25,179 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 15:42:06] 2025-10-12 19:41:25,180 | INFO     | collected zombie processes
[2025-10-12 15:42:06] 2025-10-12 19:41:25,180 | INFO     | will attempt to kill all subprocesses of pid=1349833
[2025-10-12 15:42:06] 2025-10-12 19:41:25,671 | INFO     | process IDs to be killed: [1349833] (in reverse order)
[2025-10-12 15:42:06] 2025-10-12 19:41:25,837 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 15:42:06] 2025-10-12 19:41:25,837 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 15:42:06] 2025-10-12 19:41:25,851 | INFO     | did not find any defunct processes belonging to 1349833
[2025-10-12 15:42:06] 2025-10-12 19:41:25,865 | INFO     | did not find any defunct processes belonging to 1349833
[2025-10-12 15:42:06] 2025-10-12 19:41:25,865 | INFO     | ready for new job
[2025-10-12 15:42:06] 2025-10-12 19:41:25,865 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 15:42:06] 2025-10-12 19:41:25,868 | INFO     | ***************************************
[2025-10-12 15:42:06] 2025-10-12 19:41:25,868 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 15:42:06] 2025-10-12 19:41:25,868 | INFO     | ***************************************
[2025-10-12 15:42:06] 2025-10-12 19:41:25,868 | INFO     | 
[2025-10-12 15:42:06] 2025-10-12 19:41:25,886 | INFO     | architecture information:
[2025-10-12 15:42:06] 2025-10-12 19:41:25,892 | INFO     | executing command: cat /etc/os-release
[2025-10-12 15:42:06] 2025-10-12 19:41:25,947 | INFO     | cat /etc/os-release:
[2025-10-12 15:42:06] NAME="CentOS Linux"
[2025-10-12 15:42:06] VERSION="7 (Core)"
[2025-10-12 15:42:06] ID="centos"
[2025-10-12 15:42:06] ID_LIKE="rhel fedora"
[2025-10-12 15:42:06] VERSION_ID="7"
[2025-10-12 15:42:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 15:42:06] ANSI_COLOR="0;31"
[2025-10-12 15:42:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 15:42:06] HOME_URL="https://www.centos.org/"
[2025-10-12 15:42:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 15:42:06] 
[2025-10-12 15:42:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 15:42:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 15:42:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 15:42:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 15:42:06] 
[2025-10-12 15:42:06] 2025-10-12 19:41:25,947 | INFO     | ***************************************
[2025-10-12 15:42:06] 2025-10-12 19:41:26,450 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 15:42:06] 2025-10-12 19:41:26,586 | INFO     | sufficient remaining disk space (95408881664 B)
[2025-10-12 15:42:06] 2025-10-12 19:41:26,586 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 15:42:06] 2025-10-12 19:41:26,586 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 15:42:06] 2025-10-12 19:41:26,586 | INFO     | update_server=False
[2025-10-12 15:42:06] 2025-10-12 19:41:26,586 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 15:42:06] 2025-10-12 19:41:26,588 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 15:42:06] 2025-10-12 19:41:26,591 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:42:06] 2025-10-12 19:41:26,592 | INFO     | aborting loop
[2025-10-12 15:42:06] 2025-10-12 19:41:26,746 | INFO     | all data control threads have been joined
[2025-10-12 15:42:06] 2025-10-12 19:41:27,552 | INFO     | all job control threads have been joined
[2025-10-12 15:42:06] 2025-10-12 19:41:27,593 | INFO     | [job] retrieve thread has finished
[2025-10-12 15:42:06] 2025-10-12 19:41:27,599 | INFO     | [job] job monitor thread has finished
[2025-10-12 15:42:06] 2025-10-12 19:41:27,664 | INFO     | [data] copytool_in thread has finished
[2025-10-12 15:42:06] 2025-10-12 19:41:27,713 | INFO     | [payload] validate_post thread has finished
[2025-10-12 15:42:06] 2025-10-12 19:41:27,752 | INFO     | [data] control thread has finished
[2025-10-12 15:42:06] 2025-10-12 19:41:27,935 | INFO     | all payload control threads have been joined
[2025-10-12 15:42:06] 2025-10-12 19:41:27,960 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 15:42:06] 2025-10-12 19:41:27,994 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 15:42:06] 2025-10-12 19:41:28,287 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 15:42:06] 2025-10-12 19:41:28,352 | INFO     | [job] validate thread has finished
[2025-10-12 15:42:06] 2025-10-12 19:41:28,558 | INFO     | [job] control thread has finished
[2025-10-12 15:42:06] 2025-10-12 19:41:28,595 | INFO     | [data] copytool_out thread has finished
[2025-10-12 15:42:06] 2025-10-12 19:41:28,882 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 15:42:06] 2025-10-12 19:41:28,942 | INFO     | [payload] control thread has finished
[2025-10-12 15:42:06] 2025-10-12 19:41:29,017 | INFO     | [payload] failed_post thread has finished
[2025-10-12 15:42:06] 2025-10-12 19:41:29,052 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:42:06] 2025-10-12 19:41:30,059 | INFO     | [job] queue monitor thread has finished
[2025-10-12 15:42:06] 2025-10-12 19:41:32,296 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 15:42:06] 2025-10-12 19:41:36,752 | INFO     | job.realtimelogging is not enabled
[2025-10-12 15:42:06] 2025-10-12 19:41:37,760 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 15:42:06] 2025-10-12 19:41:40,585 [wrapper] supervise_pilot (15 min periods counter: 9)
[2025-10-12 15:42:06] 2025-10-12 19:41:58,330 | INFO     | [monitor] cgroup control has ended
[2025-10-12 15:42:06] 2025-10-12 19:41:58,935 | INFO     | PID=1332287 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 15:42:06] 2025-10-12 19:41:58,935 | INFO     | .. there are 21 such processes running
[2025-10-12 15:42:06] 2025-10-12 19:41:58,936 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 15:42:06] 2025-10-12 19:41:58,936 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 15:42:06] 2025-10-12 19:41:58,936 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 15:42:06] 2025-10-12 19:42:00,433 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140485441230656)>', '<ExcThread(monitor, started 140484940912384)>']
[2025-10-12 15:42:06] 2025-10-12 19:42:00,951 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 15:42:06] 2025-10-12 19:42:00,951 | INFO     | [monitor] control thread has ended
[2025-10-12 15:42:06] 2025-10-12 19:42:05,459 | INFO     | all workflow threads have been joined
[2025-10-12 15:42:06] 2025-10-12 19:42:05,459 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 15:42:06] 2025-10-12 19:42:05,459 | INFO     | traces error code: 0
[2025-10-12 15:42:06] 2025-10-12 19:42:05,459 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 15:42:06] 2025-10-12 19:42:06,055 [wrapper] ==== pilot stdout END ====
[2025-10-12 15:42:06] 2025-10-12 19:42:06,061 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 15:42:06] 2025-10-12 19:42:06,082 [wrapper] pilotpid: 1332287
[2025-10-12 15:42:06] 2025-10-12 19:42:06,086 [wrapper] Pilot exit status: 0
[2025-10-12 15:42:06] 2025-10-12 19:42:06,136 [wrapper] pandaids: 6839637079
[2025-10-12 15:42:06] 2025-10-12 19:42:06,340 [wrapper] cleanup supervisor_pilot 1754581 1332288
[2025-10-12 15:42:06] 2025-10-12 19:42:06,377 [wrapper] Test setup, not cleaning
[2025-10-12 15:42:06] 2025-10-12 19:42:06,381 [wrapper] apfmon messages muted
[2025-10-12 15:42:06] 2025-10-12 19:42:06,392 [wrapper] ==== wrapper stdout END ====
[2025-10-12 15:42:06] 2025-10-12 19:42:06,394 [wrapper] ==== wrapper stderr END ====
[2025-10-12 15:42:06]  *** Error codes and diagnostics ***
[2025-10-12 15:42:06]     "exeErrorCode": 0,
[2025-10-12 15:42:06]     "exeErrorDiag": "",
[2025-10-12 15:42:06]     "pilotErrorCode": 0,
[2025-10-12 15:42:06]     "pilotErrorDiag": "",
[2025-10-12 15:42:06]  *** Listing of results directory ***
[2025-10-12 15:42:06] total 411724
[2025-10-12 15:42:06] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 02:54 pilot3.tar.gz
[2025-10-12 15:42:06] -rwx------. 1 boincer umatlas     36292 Oct 12 03:08 runpilot2-wrapper.sh
[2025-10-12 15:42:06] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 03:08 queuedata.json
[2025-10-12 15:42:06] -rw-r--r--. 1 boincer umatlas       100 Oct 12 13:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 15:42:06] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 13:40 run_atlas
[2025-10-12 15:42:06] -rw-r--r--. 1 boincer umatlas       105 Oct 12 13:40 job.xml
[2025-10-12 15:42:06] -rw-r--r--. 2 boincer umatlas 218114951 Oct 12 13:40 EVNT.46676267._003493.pool.root.1
[2025-10-12 15:42:06] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 13:40 shared
[2025-10-12 15:42:06] -rw-r--r--. 2 boincer umatlas    569673 Oct 12 13:40 input.tar.gz
[2025-10-12 15:42:06] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 13:40 start_atlas.sh
[2025-10-12 15:42:06] -rw-r--r--. 1 boincer umatlas         0 Oct 12 13:40 boinc_lockfile
[2025-10-12 15:42:06] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 13:40 pandaJob.out
[2025-10-12 15:42:06] -rw-------. 1 boincer umatlas    975528 Oct 12 13:41 agis_schedconf.cvmfs.json
[2025-10-12 15:42:06] -rw-------. 1 boincer umatlas   1560580 Oct 12 13:41 agis_ddmendpoints.agis.ALL.json
[2025-10-12 15:42:06] drwx------. 5 boincer umatlas      4096 Oct 12 13:41 pilot3
[2025-10-12 15:42:06] -rw-r--r--. 1 boincer umatlas      6899 Oct 12 15:39 init_data.xml
[2025-10-12 15:42:06] -rw-r--r--. 1 boincer umatlas       529 Oct 12 15:40 boinc_task_state.xml
[2025-10-12 15:42:06] -rw-------. 1 boincer umatlas 196947111 Oct 12 15:40 HITS.46676269._073337.pool.root.1
[2025-10-12 15:42:06] -rw-------. 1 boincer umatlas      1033 Oct 12 15:41 memory_monitor_summary.json
[2025-10-12 15:42:06] -rw-------. 1 boincer umatlas    379842 Oct 12 15:41 log.46676269._073337.job.log.tgz.1
[2025-10-12 15:42:06] -rw-------. 1 boincer umatlas      7777 Oct 12 15:41 heartbeat.json
[2025-10-12 15:42:06] -rw-------. 1 boincer umatlas        95 Oct 12 15:41 pilot_heartbeat.json
[2025-10-12 15:42:06] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 15:42 boinc_mmap_file
[2025-10-12 15:42:06] -rw-r--r--. 1 boincer umatlas        27 Oct 12 15:42 wrapper_checkpoint.txt
[2025-10-12 15:42:06] -rw-------. 1 boincer umatlas      4896 Oct 12 15:42 pilotlog.txt
[2025-10-12 15:42:06] -rw-------. 1 boincer umatlas    939517 Oct 12 15:42 log.46676269._073337.job.log.1
[2025-10-12 15:42:06] -rw-------. 1 boincer umatlas       357 Oct 12 15:42 output.list
[2025-10-12 15:42:06] -rw-r--r--. 1 boincer umatlas       620 Oct 12 15:42 runtime_log
[2025-10-12 15:42:06] -rw-------. 1 boincer umatlas   1341440 Oct 12 15:42 result.tar.gz
[2025-10-12 15:42:06] -rw-------. 1 boincer umatlas       653 Oct 12 15:42 uzfLDmyM5R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsyiNDmf2t9kn.diag
[2025-10-12 15:42:06] -rw-r--r--. 1 boincer umatlas      8703 Oct 12 15:42 runtime_log.err
[2025-10-12 15:42:06] -rw-r--r--. 1 boincer umatlas     20989 Oct 12 15:42 stderr.txt
[2025-10-12 15:42:06] HITS file was successfully produced:
[2025-10-12 15:42:06] -rw-------. 1 boincer umatlas 196947111 Oct 12 15:40 shared/HITS.pool.root.1
[2025-10-12 15:42:06]  *** Contents of shared directory: ***
[2025-10-12 15:42:06] total 407228
[2025-10-12 15:42:06] -rw-r--r--. 2 boincer umatlas 218114951 Oct 12 13:40 ATLAS.root_0
[2025-10-12 15:42:06] -rw-r--r--. 2 boincer umatlas    569673 Oct 12 13:40 input.tar.gz
[2025-10-12 15:42:06] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 13:40 start_atlas.sh
[2025-10-12 15:42:06] -rw-------. 1 boincer umatlas 196947111 Oct 12 15:40 HITS.pool.root.1
[2025-10-12 15:42:06] -rw-------. 1 boincer umatlas   1341440 Oct 12 15:42 result.tar.gz
15:42:08 (1323559): run_atlas exited; CPU time 34415.118226
15:42:08 (1323559): called boinc_finish(0)

</stderr_txt>
]]>

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