Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:03:32 (766918): wrapper (7.7.26015): starting
13:03:32 (766918): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 13:03:32] Arguments: --nthreads 4
[2025-10-13 13:03:32] Threads: 4
[2025-10-13 13:03:32] Checking for CVMFS
[2025-10-13 13:03:32] No cvmfs_config command found, will try listing directly
[2025-10-13 13:03:32] CVMFS is ok
[2025-10-13 13:03:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 13:03:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 13:03:32] Further information can be found at the LHC@home message board.
[2025-10-13 13:03:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 13:03:32] Checking for apptainer binary...
[2025-10-13 13:03:32] which: no apptainer in ((null))
[2025-10-13 13:03:32] apptainer is not installed, using version from CVMFS
[2025-10-13 13:03:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 13:03:32] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2025-10-13 13:03:32] apptainer works
[2025-10-13 13:03:32] Set ATHENA_PROC_NUMBER=4
[2025-10-13 13:03:32] Set ATHENA_CORE_NUMBER=4
[2025-10-13 13:03:32] Starting ATLAS job with PandaID=6839869969
[2025-10-13 13:03:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 16:03:18]  *** The last 200 lines of the pilot log: ***
[2025-10-13 16:03:18] 2025-10-13 13:58:54,229 | INFO     | mean x: 1760358969.5
[2025-10-13 16:03:18] 2025-10-13 13:58:54,229 | INFO     | mean y: 2339480.660493827
[2025-10-13 16:03:18] 2025-10-13 13:58:54,230 | INFO     | -- intersect: -5239491341.264783
[2025-10-13 16:03:18] 2025-10-13 13:58:54,230 | INFO     | intersect: -5239491341.264783
[2025-10-13 16:03:18] 2025-10-13 13:58:54,230 | INFO     | chi2: 0.0006590582472923381
[2025-10-13 16:03:18] 2025-10-13 13:58:54,230 | INFO     | current chi2=0.0006590582472923381 (change=95.26756018922761 %)
[2025-10-13 16:03:18] 2025-10-13 13:58:54,230 | INFO     | sum of square deviations: 1199940638.0
[2025-10-13 16:03:18] 2025-10-13 13:58:54,231 | INFO     | sum of deviations: 3191573436.0
[2025-10-13 16:03:18] 2025-10-13 13:58:54,231 | INFO     | mean x: 1760359122.0
[2025-10-13 16:03:18] 2025-10-13 13:58:54,231 | INFO     | mean y: 2340427.25477707
[2025-10-13 16:03:18] 2025-10-13 13:58:54,231 | INFO     | -- intersect: -4679820701.115544
[2025-10-13 16:03:18] 2025-10-13 13:58:54,231 | INFO     | intersect: -4679820701.115544
[2025-10-13 16:03:18] 2025-10-13 13:58:54,232 | INFO     | chi2: 0.0003431759387627072
[2025-10-13 16:03:18] 2025-10-13 13:58:54,232 | INFO     | current chi2=0.0003431759387627072 (change=47.92934612796297 %)
[2025-10-13 16:03:18] 2025-10-13 13:58:54,232 | INFO     | sum of square deviations: 1088905998.0
[2025-10-13 16:03:18] 2025-10-13 13:58:54,233 | INFO     | sum of deviations: 2634878072.5
[2025-10-13 16:03:18] 2025-10-13 13:58:54,233 | INFO     | mean x: 1760359274.5
[2025-10-13 16:03:18] 2025-10-13 13:58:54,233 | INFO     | mean y: 2341190.835526316
[2025-10-13 16:03:18] 2025-10-13 13:58:54,233 | INFO     | -- intersect: -4257284580.921916
[2025-10-13 16:03:18] 2025-10-13 13:58:54,233 | INFO     | intersect: -4257284580.921916
[2025-10-13 16:03:18] 2025-10-13 13:58:54,234 | INFO     | chi2: 0.0002119647450433239
[2025-10-13 16:03:18] 2025-10-13 13:58:54,234 | INFO     | current chi2=0.0002119647450433239 (change=38.23438035675069 %)
[2025-10-13 16:03:18] 2025-10-13 13:58:54,234 | INFO     | sum of square deviations: 984941258.0
[2025-10-13 16:03:18] 2025-10-13 13:58:54,235 | INFO     | sum of deviations: 2185565767.0
[2025-10-13 16:03:18] 2025-10-13 13:58:54,235 | INFO     | mean x: 1760359427.0
[2025-10-13 16:03:18] 2025-10-13 13:58:54,235 | INFO     | mean y: 2341849.319727891
[2025-10-13 16:03:18] 2025-10-13 13:58:54,235 | INFO     | -- intersect: -3903861967.422951
[2025-10-13 16:03:18] 2025-10-13 13:58:54,235 | INFO     | intersect: -3903861967.422951
[2025-10-13 16:03:18] 2025-10-13 13:58:54,235 | INFO     | chi2: 0.0001340994922123468
[2025-10-13 16:03:18] 2025-10-13 13:58:54,235 | INFO     | current chi2=0.0001340994922123468 (change=36.735001764119815 %)
[2025-10-13 16:03:18] 2025-10-13 13:58:54,236 | INFO     | sum of square deviations: 887813855.5
[2025-10-13 16:03:18] 2025-10-13 13:58:54,236 | INFO     | sum of deviations: 2000290405.9999995
[2025-10-13 16:03:18] 2025-10-13 13:58:54,236 | INFO     | mean x: 1760359579.5
[2025-10-13 16:03:18] 2025-10-13 13:58:54,237 | INFO     | mean y: 2342137.9859154928
[2025-10-13 16:03:18] 2025-10-13 13:58:54,237 | INFO     | -- intersect: -3963838786.28109
[2025-10-13 16:03:18] 2025-10-13 13:58:54,237 | INFO     | intersect: -3963838786.28109
[2025-10-13 16:03:18] 2025-10-13 13:58:54,237 | INFO     | chi2: 0.00011200916089346646
[2025-10-13 16:03:18] 2025-10-13 13:58:54,237 | INFO     | current chi2=0.00011200916089346646 (change=16.47309095242528 %)
[2025-10-13 16:03:18] 2025-10-13 13:58:54,237 | INFO     | left removable region: 60
[2025-10-13 16:03:18] 2025-10-13 13:58:54,237 | INFO     | sum of square deviations: 369281342.5
[2025-10-13 16:03:18] 2025-10-13 13:58:54,238 | INFO     | sum of deviations: 873596005.9999999
[2025-10-13 16:03:18] 2025-10-13 13:58:54,238 | INFO     | mean x: 1760360311.5
[2025-10-13 16:03:18] 2025-10-13 13:58:54,238 | INFO     | mean y: 2343304.603773585
[2025-10-13 16:03:18] 2025-10-13 13:58:54,238 | INFO     | -- intersect: -4162079752.451473
[2025-10-13 16:03:18] 2025-10-13 13:58:54,238 | INFO     | intersect: -4162079752.451473
[2025-10-13 16:03:18] 2025-10-13 13:58:54,238 | INFO     | chi2: 4.338901342146448e-05
[2025-10-13 16:03:18] 2025-10-13 13:58:54,239 | INFO     | -- intersect: -4162079752.451473
[2025-10-13 16:03:18] 2025-10-13 13:58:54,239 | INFO     | current memory leak: 2.37 B/s (using 106 data points, chi2=0.00)
[2025-10-13 16:03:18] 2025-10-13 13:58:54,239 | INFO     | could have reported an average CPU frequency of 2703 MHz (9 samples)
[2025-10-13 16:03:18] 2025-10-13 13:58:54,239 | INFO     | ..............................
[2025-10-13 16:03:18] 2025-10-13 13:58:54,240 | INFO     | . Timing measurements:
[2025-10-13 16:03:18] 2025-10-13 13:58:54,240 | INFO     | . get job = 0 s
[2025-10-13 16:03:18] 2025-10-13 13:58:54,240 | INFO     | . initial setup = 1 s
[2025-10-13 16:03:18] 2025-10-13 13:58:54,240 | INFO     | . payload setup = 6 s
[2025-10-13 16:03:18] 2025-10-13 13:58:54,240 | INFO     | . stage-in = 0 s
[2025-10-13 16:03:18] 2025-10-13 13:58:54,240 | INFO     | . payload execution = 10480 s
[2025-10-13 16:03:18] 2025-10-13 13:58:54,240 | INFO     | . stage-out = 0 s
[2025-10-13 16:03:18] 2025-10-13 13:58:54,240 | INFO     | . log creation = 0 s
[2025-10-13 16:03:18] 2025-10-13 13:58:54,240 | INFO     | ..............................
[2025-10-13 16:03:18] 2025-10-13 13:58:54,337 | INFO     | 
[2025-10-13 16:03:18] 2025-10-13 13:58:54,338 | INFO     | job summary report
[2025-10-13 16:03:18] 2025-10-13 13:58:54,338 | INFO     | --------------------------------------------------
[2025-10-13 16:03:18] 2025-10-13 13:58:54,338 | INFO     | PanDA job id: 6839869969
[2025-10-13 16:03:18] 2025-10-13 13:58:54,338 | INFO     | task id: 46676269
[2025-10-13 16:03:18] 2025-10-13 13:58:54,338 | INFO     | errors: (none)
[2025-10-13 16:03:18] 2025-10-13 13:58:54,338 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 16:03:18] 2025-10-13 13:58:54,338 | INFO     | pilot state: finished 
[2025-10-13 16:03:18] 2025-10-13 13:58:54,338 | INFO     | transexitcode: 0
[2025-10-13 16:03:18] 2025-10-13 13:58:54,338 | INFO     | exeerrorcode: 0
[2025-10-13 16:03:18] 2025-10-13 13:58:54,338 | INFO     | exeerrordiag: 
[2025-10-13 16:03:18] 2025-10-13 13:58:54,338 | INFO     | exitcode: 0
[2025-10-13 16:03:18] 2025-10-13 13:58:54,339 | INFO     | exitmsg: OK
[2025-10-13 16:03:18] 2025-10-13 13:58:54,339 | INFO     | cpuconsumptiontime: 40074 s
[2025-10-13 16:03:18] 2025-10-13 13:58:54,339 | INFO     | nevents: 400
[2025-10-13 16:03:18] 2025-10-13 13:58:54,339 | INFO     | neventsw: 0
[2025-10-13 16:03:18] 2025-10-13 13:58:54,339 | INFO     | pid: 805684
[2025-10-13 16:03:18] 2025-10-13 13:58:54,339 | INFO     | pgrp: 805684
[2025-10-13 16:03:18] 2025-10-13 13:58:54,339 | INFO     | corecount: 4
[2025-10-13 16:03:18] 2025-10-13 13:58:54,339 | INFO     | event service: False
[2025-10-13 16:03:18] 2025-10-13 13:58:54,339 | INFO     | sizes: {0: 2348868, 5: 2349130, 11: 2349186, 10491: 2378019, 10492: 2387095, 10496: 2387297}
[2025-10-13 16:03:18] 2025-10-13 13:58:54,339 | INFO     | --------------------------------------------------
[2025-10-13 16:03:18] 2025-10-13 13:58:54,339 | INFO     | 
[2025-10-13 16:03:18] 2025-10-13 13:58:54,339 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2025-10-13 16:03:18] 2025-10-13 13:58:54,360 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 16:03:18] 2025-10-13 13:58:54,361 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 16:03:18] 2025-10-13 13:58:54,361 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 16:03:18] 2025-10-13 13:58:54,361 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 16:03:18] 2025-10-13 13:58:54,361 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 16:03:18] 2025-10-13 13:58:54,361 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 16:03:18] 2025-10-13 13:58:54,361 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 16:03:18] 2025-10-13 13:58:54,361 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 16:03:18] 2025-10-13 13:58:54,361 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 16:03:18] 2025-10-13 13:58:54,361 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 16:03:18] 2025-10-13 13:58:54,362 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 16:03:18] 2025-10-13 13:58:54,362 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 16:03:18] 2025-10-13 13:58:54,362 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 16:03:18] 2025-10-13 13:58:54,362 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 16:03:18] 2025-10-13 13:58:54,362 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 16:03:18] 2025-10-13 13:58:54,362 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 16:03:18] 2025-10-13 13:58:54,362 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 16:03:18] 2025-10-13 13:58:54,362 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 16:03:18] 2025-10-13 13:58:54,362 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 16:03:18] 2025-10-13 13:58:54,362 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 16:03:18] 2025-10-13 13:58:54,363 | INFO     | job 6839869969 has completed (purged errors)
[2025-10-13 16:03:18] 2025-10-13 13:58:54,363 | INFO     | overall cleanup function is called
[2025-10-13 16:03:18] 2025-10-13 13:58:55,320 | WARNING  | process 805684 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 16:03:18] 2025-10-13 13:58:55,371 | INFO     | --- collectZombieJob: --- 10, [805684]
[2025-10-13 16:03:18] 2025-10-13 13:58:55,371 | INFO     | zombie collector waiting for pid 805684
[2025-10-13 16:03:18] 2025-10-13 13:58:55,372 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 16:03:18] 2025-10-13 13:58:55,372 | INFO     | collected zombie processes
[2025-10-13 16:03:18] 2025-10-13 13:58:55,372 | INFO     | will attempt to kill all subprocesses of pid=805684
[2025-10-13 16:03:18] 2025-10-13 13:58:56,018 | INFO     | using path: /scratch/boinc/var/slot52/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 16:03:18] 2025-10-13 13:58:56,351 | INFO     | process IDs to be killed: [805684] (in reverse order)
[2025-10-13 16:03:18] 2025-10-13 13:58:56,456 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 16:03:18] 2025-10-13 13:58:56,456 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 16:03:18] 2025-10-13 13:58:56,485 | INFO     | did not find any defunct processes belonging to 805684
[2025-10-13 16:03:18] 2025-10-13 13:58:56,511 | INFO     | did not find any defunct processes belonging to 805684
[2025-10-13 16:03:18] 2025-10-13 13:58:56,511 | INFO     | ready for new job
[2025-10-13 16:03:18] 2025-10-13 13:58:56,511 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 16:03:18] 2025-10-13 13:58:56,513 | INFO     | ***************************************
[2025-10-13 16:03:18] 2025-10-13 13:58:56,514 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 16:03:18] 2025-10-13 13:58:56,514 | INFO     | ***************************************
[2025-10-13 16:03:18] 2025-10-13 13:58:56,514 | INFO     | 
[2025-10-13 16:03:18] 2025-10-13 13:58:56,518 | INFO     | architecture information:
[2025-10-13 16:03:18] 2025-10-13 13:58:56,519 | INFO     | executing command: cat /etc/os-release
[2025-10-13 16:03:18] 2025-10-13 13:58:56,535 | INFO     | cat /etc/os-release:
[2025-10-13 16:03:18] NAME="CentOS Linux"
[2025-10-13 16:03:18] VERSION="7 (Core)"
[2025-10-13 16:03:18] ID="centos"
[2025-10-13 16:03:18] ID_LIKE="rhel fedora"
[2025-10-13 16:03:18] VERSION_ID="7"
[2025-10-13 16:03:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 16:03:18] ANSI_COLOR="0;31"
[2025-10-13 16:03:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 16:03:18] HOME_URL="https://www.centos.org/"
[2025-10-13 16:03:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 16:03:18] 
[2025-10-13 16:03:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 16:03:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 16:03:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 16:03:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 16:03:18] 
[2025-10-13 16:03:18] 2025-10-13 13:58:56,535 | INFO     | ***************************************
[2025-10-13 16:03:18] 2025-10-13 13:58:56,603 | INFO     | number of running child processes to parent process 805684: 1
[2025-10-13 16:03:18] 2025-10-13 13:58:56,605 | INFO     | maximum number of monitored processes: 6
[2025-10-13 16:03:18] 2025-10-13 13:58:56,605 | INFO     | aborting job monitoring since job object (job id=6839869969) has expired
[2025-10-13 16:03:18] 2025-10-13 13:58:57,038 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2025-10-13 16:03:18] 2025-10-13 13:58:57,056 | INFO     | sufficient remaining disk space (694493904896 B)
[2025-10-13 16:03:18] 2025-10-13 13:58:57,056 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 16:03:18] 2025-10-13 13:58:57,056 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 16:03:18] 2025-10-13 13:58:57,056 | INFO     | update_server=False
[2025-10-13 16:03:18] 2025-10-13 13:58:57,056 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 16:03:18] 2025-10-13 13:58:57,057 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 16:03:18] 2025-10-13 13:58:57,057 | INFO     | will abort loop
[2025-10-13 16:03:18] 2025-10-13 13:58:57,562 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 16:03:18] 2025-10-13 13:58:58,003 | INFO     | all job control threads have been joined
[2025-10-13 16:03:18] 2025-10-13 13:58:58,059 | INFO     | [job] retrieve thread has finished
[2025-10-13 16:03:18] 2025-10-13 13:58:58,063 | INFO     | [job] job monitor thread has finished
[2025-10-13 16:03:18] 2025-10-13 13:58:58,085 | INFO     | all data control threads have been joined
[2025-10-13 16:03:18] 2025-10-13 13:58:58,348 | INFO     | [data] copytool_in thread has finished
[2025-10-13 16:03:18] 2025-10-13 13:58:58,482 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 16:03:18] 2025-10-13 13:58:58,483 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 16:03:18] 2025-10-13 13:58:58,490 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 16:03:18] 2025-10-13 13:58:58,520 | INFO     | all payload control threads have been joined
[2025-10-13 16:03:18] 2025-10-13 13:58:58,570 | INFO     | [payload] failed_post thread has finished
[2025-10-13 16:03:18] 2025-10-13 13:58:58,797 | INFO     | [monitor] cgroup control has ended
[2025-10-13 16:03:18] 2025-10-13 13:58:59,008 | INFO     | [job] control thread has finished
[2025-10-13 16:03:18] 2025-10-13 13:58:59,087 | INFO     | [data] control thread has finished
[2025-10-13 16:03:18] 2025-10-13 13:58:59,285 | INFO     | [payload] validate_post thread has finished
[2025-10-13 16:03:18] 2025-10-13 13:58:59,348 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 16:03:18] 2025-10-13 13:58:59,392 | INFO     | [job] validate thread has finished
[2025-10-13 16:03:18] 2025-10-13 13:58:59,525 | INFO     | [payload] control thread has finished
[2025-10-13 16:03:18] 2025-10-13 13:58:59,563 | INFO     | [data] copytool_out thread has finished
[2025-10-13 16:03:18] 2025-10-13 13:59:00,149 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 16:03:18] 2025-10-13 13:59:00,354 | INFO     | [job] queue monitor thread has finished
[2025-10-13 16:03:18] 2025-10-13 13:59:04,155 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 16:03:18] 2025-10-13 13:59:07,415 | INFO     | job.realtimelogging is not enabled
[2025-10-13 16:03:18] 2025-10-13 13:59:08,421 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 16:03:18] 2025-10-13 13:59:10,038 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23328316360512)>', '<ExcThread(monitor, started 23328074983168)>']
[2025-10-13 16:03:18] 2025-10-13 13:59:15,057 | INFO     | all workflow threads have been joined
[2025-10-13 16:03:18] 2025-10-13 13:59:15,057 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 16:03:18] 2025-10-13 13:59:15,058 | INFO     | traces error code: 0
[2025-10-13 16:03:18] 2025-10-13 13:59:15,058 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 16:03:18] 2025-10-13 13:59:26,163 | INFO     | PID=776568 has CPU usage=9.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 16:03:18] 2025-10-13 13:59:26,164 | INFO     | .. there are 5 such processes running
[2025-10-13 16:03:18] 2025-10-13 13:59:26,164 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 16:03:18] 2025-10-13 13:59:26,164 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 16:03:18] 2025-10-13 13:59:26,164 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 16:03:18] 2025-10-13 13:59:26,164 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 16:03:18] 2025-10-13 13:59:26,164 | INFO     | [monitor] control thread has ended
[2025-10-13 16:03:18] 2025-10-13 13:59:26,295 [wrapper] ==== pilot stdout END ====
[2025-10-13 16:03:18] 2025-10-13 13:59:26,297 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 16:03:18] 2025-10-13 13:59:26,300 [wrapper] pilotpid: 776568
[2025-10-13 16:03:18] 2025-10-13 13:59:26,302 [wrapper] Pilot exit status: 0
[2025-10-13 16:03:18] 2025-10-13 13:59:26,311 [wrapper] pandaids: 6839869969
[2025-10-13 16:03:18] 2025-10-13 13:59:26,383 [wrapper] cleanup supervisor_pilot 1015371 776570
[2025-10-13 16:03:18] 2025-10-13 13:59:26,385 [wrapper] Test setup, not cleaning
[2025-10-13 16:03:18] 2025-10-13 13:59:26,388 [wrapper] apfmon messages muted
[2025-10-13 16:03:18] 2025-10-13 13:59:26,390 [wrapper] ==== wrapper stdout END ====
[2025-10-13 16:03:18] 2025-10-13 13:59:26,393 [wrapper] ==== wrapper stderr END ====
[2025-10-13 16:03:18]  *** Error codes and diagnostics ***
[2025-10-13 16:03:18]     "exeErrorCode": 0,
[2025-10-13 16:03:18]     "exeErrorDiag": "",
[2025-10-13 16:03:18]     "pilotErrorCode": 0,
[2025-10-13 16:03:18]     "pilotErrorDiag": "",
[2025-10-13 16:03:18]  *** Listing of results directory ***
[2025-10-13 16:03:18] total 413588
[2025-10-13 16:03:18] -rw-r--r-- 1 boinc boinc    557409 Oct 12 12:57 pilot3.tar.gz
[2025-10-13 16:03:18] -rwx------ 1 boinc boinc     36292 Oct 12 13:18 runpilot2-wrapper.sh
[2025-10-13 16:03:18] -rw-r--r-- 1 boinc boinc      5112 Oct 12 13:18 queuedata.json
[2025-10-13 16:03:18] -rw-r--r-- 1 boinc boinc       100 Oct 13 13:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 16:03:18] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 13:03 run_atlas
[2025-10-13 16:03:18] -rw-r--r-- 1 boinc boinc       105 Oct 13 13:03 job.xml
[2025-10-13 16:03:18] -rw-r--r-- 2 boinc boinc 218844203 Oct 13 13:03 EVNT.46676267._003671.pool.root.1
[2025-10-13 16:03:18] -rw-r--r-- 1 boinc boinc      6635 Oct 13 13:03 init_data.xml
[2025-10-13 16:03:18] -rw-r--r-- 2 boinc boinc     15120 Oct 13 13:03 start_atlas.sh
[2025-10-13 16:03:18] drwxrwx--x 2 boinc boinc      4096 Oct 13 13:03 shared
[2025-10-13 16:03:18] -rw-r--r-- 2 boinc boinc    569677 Oct 13 13:03 input.tar.gz
[2025-10-13 16:03:18] -rw-r--r-- 1 boinc boinc         0 Oct 13 13:03 boinc_lockfile
[2025-10-13 16:03:18] -rw-r--r-- 1 boinc boinc      2550 Oct 13 13:03 pandaJob.out
[2025-10-13 16:03:18] -rw------- 1 boinc boinc    972497 Oct 13 13:03 agis_schedconf.cvmfs.json
[2025-10-13 16:03:18] -rw------- 1 boinc boinc   1560580 Oct 13 13:03 agis_ddmendpoints.agis.ALL.json
[2025-10-13 16:03:18] drwx------ 5 boinc boinc      4096 Oct 13 13:03 pilot3
[2025-10-13 16:03:18] -rw------- 1 boinc boinc 197085753 Oct 13 15:58 HITS.46676269._076943.pool.root.1
[2025-10-13 16:03:18] -rw-r--r-- 1 boinc boinc       528 Oct 13 15:58 boinc_task_state.xml
[2025-10-13 16:03:18] -rw------- 1 boinc boinc        95 Oct 13 15:58 pilot_heartbeat.json
[2025-10-13 16:03:18] -rw------- 1 boinc boinc      1034 Oct 13 15:58 memory_monitor_summary.json
[2025-10-13 16:03:18] -rw------- 1 boinc boinc    342255 Oct 13 15:58 log.46676269._076943.job.log.tgz.1
[2025-10-13 16:03:18] -rw------- 1 boinc boinc      7826 Oct 13 15:58 heartbeat.json
[2025-10-13 16:03:18] -rw------- 1 boinc boinc       821 Oct 13 15:59 pilotlog.txt
[2025-10-13 16:03:18] -rw------- 1 boinc boinc   1502476 Oct 13 15:59 log.46676269._076943.job.log.1
[2025-10-13 16:03:18] -rw------- 1 boinc boinc       357 Oct 13 15:59 output.list
[2025-10-13 16:03:18] -rw-r--r-- 1 boinc boinc       620 Oct 13 15:59 runtime_log
[2025-10-13 16:03:18] -rw------- 1 boinc boinc   1863680 Oct 13 15:59 result.tar.gz
[2025-10-13 16:03:18] -rw-r--r-- 1 boinc boinc      9070 Oct 13 15:59 runtime_log.err
[2025-10-13 16:03:18] -rw------- 1 boinc boinc       664 Oct 13 15:59 WmRLDmsG9R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmYjTMDmke5eqm.diag
[2025-10-13 16:03:18] -rw-r--r-- 1 boinc boinc      8192 Oct 13 16:03 boinc_mmap_file
[2025-10-13 16:03:18] -rw-r--r-- 1 boinc boinc        26 Oct 13 16:03 wrapper_checkpoint.txt
[2025-10-13 16:03:18] -rw-r--r-- 1 boinc boinc     20843 Oct 13 16:03 stderr.txt
[2025-10-13 16:03:18] HITS file was successfully produced:
[2025-10-13 16:03:18] -rw------- 1 boinc boinc 197085753 Oct 13 15:58 shared/HITS.pool.root.1
[2025-10-13 16:03:18]  *** Contents of shared directory: ***
[2025-10-13 16:03:18] total 408588
[2025-10-13 16:03:18] -rw-r--r-- 2 boinc boinc 218844203 Oct 13 13:03 ATLAS.root_0
[2025-10-13 16:03:18] -rw-r--r-- 2 boinc boinc     15120 Oct 13 13:03 start_atlas.sh
[2025-10-13 16:03:18] -rw-r--r-- 2 boinc boinc    569677 Oct 13 13:03 input.tar.gz
[2025-10-13 16:03:18] -rw------- 1 boinc boinc 197085753 Oct 13 15:58 HITS.pool.root.1
[2025-10-13 16:03:18] -rw------- 1 boinc boinc   1863680 Oct 13 15:59 result.tar.gz
16:03:20 (766918): run_atlas exited; CPU time 40503.346906
16:03:20 (766918): called boinc_finish(0)

</stderr_txt>
]]>

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