Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:24:18 (15121): wrapper (7.7.26015): starting
11:24:18 (15121): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 11:24:18] Arguments: --nthreads 12
[2025-10-12 11:24:18] Threads: 12
[2025-10-12 11:24:18] Checking for CVMFS
[2025-10-12 11:24:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 11:24:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 11:24:18] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 11:24:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 11:24:18] 2.11.2.0 2913 223058 100136 151625 1 56 15242195 20275201 1 130560 1 109103615 99.984 13337571 12543 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 11:24:18] CVMFS is ok
[2025-10-12 11:24:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 11:24:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 11:24:18] Further information can be found at the LHC@home message board.
[2025-10-12 11:24:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 11:24:18] Checking for apptainer binary...
[2025-10-12 11:24:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 11:24:18] Running /usr/bin/apptainer --version
[2025-10-12 11:24:18] apptainer version 1.3.2-1.el7
[2025-10-12 11:24:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 11:24:20] c-205-6.aglt2.org
[2025-10-12 11:24:20] apptainer works
[2025-10-12 11:24:20] Set ATHENA_PROC_NUMBER=12
[2025-10-12 11:24:20] Set ATHENA_CORE_NUMBER=12
[2025-10-12 11:24:20] Starting ATLAS job with PandaID=6839821309
[2025-10-12 11:24:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 12:38:06]  *** The last 200 lines of the pilot log: ***
[2025-10-12 12:38:06] 2025-10-12 16:37:24,035 | INFO     | transferring file log.46676269._074997.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6839821309/log.46676269._074997.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 12:38:06] 2025-10-12 16:37:24,035 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6839821309/log.46676269._074997.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._074997.job
[2025-10-12 12:38:06] 2025-10-12 16:37:24,040 | INFO     | number of running child processes to parent process 25148: 1
[2025-10-12 12:38:06] 2025-10-12 16:37:24,041 | INFO     | maximum number of monitored processes: 6
[2025-10-12 12:38:06] 2025-10-12 16:37:24,059 | INFO     | adding to output.list: log.46676269._074997.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/96/08/log.46676269._074997.job.log.tg
[2025-10-12 12:38:06] 2025-10-12 16:37:24,060 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 12:38:06] 2025-10-12 16:37:24,060 | INFO     | summary of transferred files:
[2025-10-12 12:38:06] 2025-10-12 16:37:24,060 | INFO     |  -- lfn=log.46676269._074997.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 12:38:06] 2025-10-12 16:37:24,061 | INFO     | stage-out finished correctly
[2025-10-12 12:38:06] 2025-10-12 16:37:24,581 | INFO     | time since job start (4369s) is within the limit (172800.0s)
[2025-10-12 12:38:06] 2025-10-12 16:37:25,701 | INFO     | PID=18793 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 12:38:06] 2025-10-12 16:37:26,544 | INFO     | monitor loop #325: job 0:6839821309 is in state 'finished'
[2025-10-12 12:38:06] 2025-10-12 16:37:26,544 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 12:38:06] 2025-10-12 16:37:26,702 | INFO     | time since job start (4371s) is within the limit (172800.0s)
[2025-10-12 12:38:06] 2025-10-12 16:37:27,277 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 12:38:06] 2025-10-12 16:37:28,707 | INFO     | time since job start (4373s) is within the limit (172800.0s)
[2025-10-12 12:38:06] 2025-10-12 16:37:29,047 | INFO     | monitor loop #326: job 0:6839821309 is in state 'finished'
[2025-10-12 12:38:06] 2025-10-12 16:37:29,048 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 12:38:06] 2025-10-12 16:37:29,565 | INFO     | job 6839821309 has state=finished
[2025-10-12 12:38:06] 2025-10-12 16:37:29,565 | INFO     | preparing for final server update for job 6839821309 in state='finished'
[2025-10-12 12:38:06] 2025-10-12 16:37:29,565 | INFO     | this job has now completed (state=finished)
[2025-10-12 12:38:06] 2025-10-12 16:37:29,566 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 12:38:06] 2025-10-12 16:37:29,566 | INFO     | log transfer has been attempted: DONE
[2025-10-12 12:38:06] 2025-10-12 16:37:29,566 | INFO     | job 6839821309 has finished - writing final server update
[2025-10-12 12:38:06] 2025-10-12 16:37:29,566 | INFO     | total number of processed events: 400 (read)
[2025-10-12 12:38:06] 2025-10-12 16:37:29,567 | INFO     | executing command: lscpu
[2025-10-12 12:38:06] 2025-10-12 16:37:29,593 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 12:38:06] 2025-10-12 16:37:30,712 | INFO     | time since job start (4375s) is within the limit (172800.0s)
[2025-10-12 12:38:06] 2025-10-12 16:37:31,558 | INFO     | monitor loop #327: job 0:6839821309 is in state 'finished'
[2025-10-12 12:38:06] 2025-10-12 16:37:31,558 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 12:38:06] 2025-10-12 16:37:32,718 | INFO     | time since job start (4377s) is within the limit (172800.0s)
[2025-10-12 12:38:06] 2025-10-12 16:37:34,061 | INFO     | monitor loop #328: job 0:6839821309 is in state 'finished'
[2025-10-12 12:38:06] 2025-10-12 16:37:34,061 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 12:38:06] 2025-10-12 16:37:34,287 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 12:38:06] 2025-10-12 16:37:34,290 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.75
[2025-10-12 12:38:06] 2025-10-12 16:37:34,292 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839821309/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 12:38:06] 2025-10-12 16:37:34,292 | INFO     | extracted standard info from prmon json
[2025-10-12 12:38:06] 2025-10-12 16:37:34,293 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 12:38:06] 2025-10-12 16:37:34,293 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 12:38:06] 2025-10-12 16:37:34,293 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 12:38:06] 2025-10-12 16:37:34,293 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 12:38:06] 2025-10-12 16:37:34,295 | INFO     | fitting pss+swap vs Time
[2025-10-12 12:38:06] 2025-10-12 16:37:34,295 | INFO     | sum of square deviations: 85136480.0
[2025-10-12 12:38:06] 2025-10-12 16:37:34,295 | INFO     | sum of deviations: -1554342769.0
[2025-10-12 12:38:06] 2025-10-12 16:37:34,295 | INFO     | mean x: 1760284961.0
[2025-10-12 12:38:06] 2025-10-12 16:37:34,295 | INFO     | mean y: 2934871.323076923
[2025-10-12 12:38:06] 2025-10-12 16:37:34,296 | INFO     | -- intersect: 32140582569.581184
[2025-10-12 12:38:06] 2025-10-12 16:37:34,296 | INFO     | intersect: 32140582569.581184
[2025-10-12 12:38:06] 2025-10-12 16:37:34,296 | INFO     | chi2: 0.05439488251412347
[2025-10-12 12:38:06] 2025-10-12 16:37:34,296 | INFO     | -- intersect: 32140582569.581184
[2025-10-12 12:38:06] 2025-10-12 16:37:34,296 | INFO     | current memory leak: -18.26 B/s (using 65 data points, chi2=0.05)
[2025-10-12 12:38:06] 2025-10-12 16:37:34,296 | INFO     | could have reported an average CPU frequency of 2032 MHz (6 samples)
[2025-10-12 12:38:06] 2025-10-12 16:37:34,297 | INFO     | ..............................
[2025-10-12 12:38:06] 2025-10-12 16:37:34,297 | INFO     | . Timing measurements:
[2025-10-12 12:38:06] 2025-10-12 16:37:34,297 | INFO     | . get job = 0 s
[2025-10-12 12:38:06] 2025-10-12 16:37:34,297 | INFO     | . initial setup = 2 s
[2025-10-12 12:38:06] 2025-10-12 16:37:34,297 | INFO     | . payload setup = 7 s
[2025-10-12 12:38:06] 2025-10-12 16:37:34,297 | INFO     | . stage-in = 0 s
[2025-10-12 12:38:06] 2025-10-12 16:37:34,297 | INFO     | . payload execution = 4341 s
[2025-10-12 12:38:06] 2025-10-12 16:37:34,297 | INFO     | . stage-out = 0 s
[2025-10-12 12:38:06] 2025-10-12 16:37:34,298 | INFO     | . log creation = 0 s
[2025-10-12 12:38:06] 2025-10-12 16:37:34,298 | INFO     | ..............................
[2025-10-12 12:38:06] 2025-10-12 16:37:34,379 | INFO     | 
[2025-10-12 12:38:06] 2025-10-12 16:37:34,379 | INFO     | job summary report
[2025-10-12 12:38:06] 2025-10-12 16:37:34,380 | INFO     | --------------------------------------------------
[2025-10-12 12:38:06] 2025-10-12 16:37:34,380 | INFO     | PanDA job id: 6839821309
[2025-10-12 12:38:06] 2025-10-12 16:37:34,380 | INFO     | task id: 46676269
[2025-10-12 12:38:06] 2025-10-12 16:37:34,380 | INFO     | errors: (none)
[2025-10-12 12:38:06] 2025-10-12 16:37:34,380 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 12:38:06] 2025-10-12 16:37:34,380 | INFO     | pilot state: finished 
[2025-10-12 12:38:06] 2025-10-12 16:37:34,381 | INFO     | transexitcode: 0
[2025-10-12 12:38:06] 2025-10-12 16:37:34,381 | INFO     | exeerrorcode: 0
[2025-10-12 12:38:06] 2025-10-12 16:37:34,381 | INFO     | exeerrordiag: 
[2025-10-12 12:38:06] 2025-10-12 16:37:34,381 | INFO     | exitcode: 0
[2025-10-12 12:38:06] 2025-10-12 16:37:34,381 | INFO     | exitmsg: OK
[2025-10-12 12:38:06] 2025-10-12 16:37:34,381 | INFO     | cpuconsumptiontime: 46787 s
[2025-10-12 12:38:06] 2025-10-12 16:37:34,381 | INFO     | nevents: 400
[2025-10-12 12:38:06] 2025-10-12 16:37:34,382 | INFO     | neventsw: 0
[2025-10-12 12:38:06] 2025-10-12 16:37:34,382 | INFO     | pid: 25148
[2025-10-12 12:38:06] 2025-10-12 16:37:34,382 | INFO     | pgrp: 25148
[2025-10-12 12:38:06] 2025-10-12 16:37:34,382 | INFO     | corecount: 12
[2025-10-12 12:38:06] 2025-10-12 16:37:34,382 | INFO     | event service: False
[2025-10-12 12:38:06] 2025-10-12 16:37:34,382 | INFO     | sizes: {0: 2348029, 1: 2348885, 6: 2349147, 12: 2349175, 4352: 2375251, 4353: 2384249, 4356: 2384433, 4363: 2384627}
[2025-10-12 12:38:06] 2025-10-12 16:37:34,383 | INFO     | --------------------------------------------------
[2025-10-12 12:38:06] 2025-10-12 16:37:34,383 | INFO     | 
[2025-10-12 12:38:06] 2025-10-12 16:37:34,383 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 12:38:06] 2025-10-12 16:37:34,407 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 12:38:06] 2025-10-12 16:37:34,407 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 12:38:06] 2025-10-12 16:37:34,407 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 12:38:06] 2025-10-12 16:37:34,407 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 12:38:06] 2025-10-12 16:37:34,407 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 12:38:06] 2025-10-12 16:37:34,408 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 12:38:06] 2025-10-12 16:37:34,408 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 12:38:06] 2025-10-12 16:37:34,408 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 12:38:06] 2025-10-12 16:37:34,408 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 12:38:06] 2025-10-12 16:37:34,408 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 12:38:06] 2025-10-12 16:37:34,409 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 12:38:06] 2025-10-12 16:37:34,409 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 12:38:06] 2025-10-12 16:37:34,409 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 12:38:06] 2025-10-12 16:37:34,409 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 12:38:06] 2025-10-12 16:37:34,409 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 12:38:06] 2025-10-12 16:37:34,409 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 12:38:06] 2025-10-12 16:37:34,409 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 12:38:06] 2025-10-12 16:37:34,410 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 12:38:06] 2025-10-12 16:37:34,410 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 12:38:06] 2025-10-12 16:37:34,410 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 12:38:06] 2025-10-12 16:37:34,410 | INFO     | job 6839821309 has completed (purged errors)
[2025-10-12 12:38:06] 2025-10-12 16:37:34,410 | INFO     | overall cleanup function is called
[2025-10-12 12:38:06] 2025-10-12 16:37:35,418 | INFO     | --- collectZombieJob: --- 10, [25148]
[2025-10-12 12:38:06] 2025-10-12 16:37:35,419 | INFO     | zombie collector waiting for pid 25148
[2025-10-12 12:38:06] 2025-10-12 16:37:35,419 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 12:38:06] 2025-10-12 16:37:35,419 | INFO     | collected zombie processes
[2025-10-12 12:38:06] 2025-10-12 16:37:35,419 | INFO     | will attempt to kill all subprocesses of pid=25148
[2025-10-12 12:38:06] 2025-10-12 16:37:35,512 | INFO     | process IDs to be killed: [25148] (in reverse order)
[2025-10-12 12:38:06] 2025-10-12 16:37:35,563 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 12:38:06] 2025-10-12 16:37:35,563 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 12:38:06] 2025-10-12 16:37:35,567 | INFO     | did not find any defunct processes belonging to 25148
[2025-10-12 12:38:06] 2025-10-12 16:37:35,570 | INFO     | did not find any defunct processes belonging to 25148
[2025-10-12 12:38:06] 2025-10-12 16:37:35,570 | INFO     | ready for new job
[2025-10-12 12:38:06] 2025-10-12 16:37:35,570 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 12:38:06] 2025-10-12 16:37:35,571 | INFO     | ***************************************
[2025-10-12 12:38:06] 2025-10-12 16:37:35,571 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 12:38:06] 2025-10-12 16:37:35,571 | INFO     | ***************************************
[2025-10-12 12:38:06] 2025-10-12 16:37:35,572 | INFO     | 
[2025-10-12 12:38:06] 2025-10-12 16:37:35,572 | INFO     | architecture information:
[2025-10-12 12:38:06] 2025-10-12 16:37:35,573 | INFO     | executing command: cat /etc/os-release
[2025-10-12 12:38:06] 2025-10-12 16:37:35,588 | INFO     | cat /etc/os-release:
[2025-10-12 12:38:06] NAME="CentOS Linux"
[2025-10-12 12:38:06] VERSION="7 (Core)"
[2025-10-12 12:38:06] ID="centos"
[2025-10-12 12:38:06] ID_LIKE="rhel fedora"
[2025-10-12 12:38:06] VERSION_ID="7"
[2025-10-12 12:38:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 12:38:06] ANSI_COLOR="0;31"
[2025-10-12 12:38:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 12:38:06] HOME_URL="https://www.centos.org/"
[2025-10-12 12:38:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 12:38:06] 
[2025-10-12 12:38:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 12:38:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 12:38:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 12:38:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 12:38:06] 
[2025-10-12 12:38:06] 2025-10-12 16:37:35,589 | INFO     | ***************************************
[2025-10-12 12:38:06] 2025-10-12 16:37:36,092 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 12:38:06] 2025-10-12 16:37:36,108 | INFO     | sufficient remaining disk space (29372710912 B)
[2025-10-12 12:38:06] 2025-10-12 16:37:36,109 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 12:38:06] 2025-10-12 16:37:36,109 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 12:38:06] 2025-10-12 16:37:36,109 | INFO     | update_server=False
[2025-10-12 12:38:06] 2025-10-12 16:37:36,109 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 12:38:06] 2025-10-12 16:37:36,110 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:38:06] 2025-10-12 16:37:36,146 | INFO     | all data control threads have been joined
[2025-10-12 12:38:06] 2025-10-12 16:37:36,249 | INFO     | all payload control threads have been joined
[2025-10-12 12:38:06] 2025-10-12 16:37:36,528 | INFO     | all job control threads have been joined
[2025-10-12 12:38:06] 2025-10-12 16:37:36,564 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 12:38:06] 2025-10-12 16:37:36,564 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 12:38:06] 2025-10-12 16:37:36,565 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:38:06] 2025-10-12 16:37:36,565 | INFO     | will abort loop
[2025-10-12 12:38:06] 2025-10-12 16:37:37,115 | INFO     | [job] retrieve thread has finished
[2025-10-12 12:38:06] 2025-10-12 16:37:37,115 | INFO     | [job] queue monitor thread has finished
[2025-10-12 12:38:06] 2025-10-12 16:37:37,149 | INFO     | [data] control thread has finished
[2025-10-12 12:38:06] 2025-10-12 16:37:37,161 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 12:38:06] 2025-10-12 16:37:37,255 | INFO     | [payload] control thread has finished
[2025-10-12 12:38:06] 2025-10-12 16:37:37,497 | INFO     | [payload] failed_post thread has finished
[2025-10-12 12:38:06] 2025-10-12 16:37:37,531 | INFO     | [job] control thread has finished
[2025-10-12 12:38:06] 2025-10-12 16:37:37,570 | INFO     | [job] job monitor thread has finished
[2025-10-12 12:38:06] 2025-10-12 16:37:37,623 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 12:38:06] 2025-10-12 16:37:37,627 | INFO     | [job] validate thread has finished
[2025-10-12 12:38:06] 2025-10-12 16:37:37,875 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 12:38:06] 2025-10-12 16:37:37,943 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 12:38:06] 2025-10-12 16:37:38,247 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 12:38:06] 2025-10-12 16:37:38,251 | INFO     | [data] copytool_in thread has finished
[2025-10-12 12:38:06] 2025-10-12 16:37:38,608 | INFO     | [payload] validate_post thread has finished
[2025-10-12 12:38:06] 2025-10-12 16:37:39,167 | INFO     | [data] copytool_out thread has finished
[2025-10-12 12:38:06] 2025-10-12 16:37:41,678 | INFO     | [monitor] cgroup control has ended
[2025-10-12 12:38:06] 2025-10-12 16:37:41,881 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 12:38:06] 2025-10-12 16:37:46,788 | INFO     | job.realtimelogging is not enabled
[2025-10-12 12:38:06] 2025-10-12 16:37:47,793 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 12:38:06] 2025-10-12 16:37:49,010 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140518084228928)>', '<ExcThread(monitor, started 140516758906624)>']
[2025-10-12 12:38:06] 2025-10-12 16:37:54,036 | INFO     | all workflow threads have been joined
[2025-10-12 12:38:06] 2025-10-12 16:37:54,036 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 12:38:06] 2025-10-12 16:37:54,036 | INFO     | traces error code: 0
[2025-10-12 12:38:06] 2025-10-12 16:37:54,037 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 12:38:06] 2025-10-12 16:38:04,803 | INFO     | 4382s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-12 12:38:06] 2025-10-12 16:38:05,921 | INFO     | PID=18793 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 12:38:06] 2025-10-12 16:38:05,922 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 12:38:06] 2025-10-12 16:38:05,922 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 12:38:06] 2025-10-12 16:38:05,922 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 12:38:06] 2025-10-12 16:38:05,922 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 12:38:06] 2025-10-12 16:38:05,922 | INFO     | [monitor] control thread has ended
[2025-10-12 12:38:06] 2025-10-12 16:38:06,010 [wrapper] ==== pilot stdout END ====
[2025-10-12 12:38:06] 2025-10-12 16:38:06,014 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 12:38:06] 2025-10-12 16:38:06,018 [wrapper] pilotpid: 18793
[2025-10-12 12:38:06] 2025-10-12 16:38:06,021 [wrapper] Pilot exit status: 0
[2025-10-12 12:38:06] 2025-10-12 16:38:06,037 [wrapper] pandaids: 6839821309
[2025-10-12 12:38:06] 2025-10-12 16:38:06,076 [wrapper] cleanup supervisor_pilot 30696 18794
[2025-10-12 12:38:06] 2025-10-12 16:38:06,079 [wrapper] Test setup, not cleaning
[2025-10-12 12:38:06] 2025-10-12 16:38:06,083 [wrapper] apfmon messages muted
[2025-10-12 12:38:06] 2025-10-12 16:38:06,087 [wrapper] ==== wrapper stdout END ====
[2025-10-12 12:38:06] 2025-10-12 16:38:06,090 [wrapper] ==== wrapper stderr END ====
[2025-10-12 12:38:06]  *** Error codes and diagnostics ***
[2025-10-12 12:38:06]     "exeErrorCode": 0,
[2025-10-12 12:38:06]     "exeErrorDiag": "",
[2025-10-12 12:38:06]     "pilotErrorCode": 0,
[2025-10-12 12:38:06]     "pilotErrorDiag": "",
[2025-10-12 12:38:06]  *** Listing of results directory ***
[2025-10-12 12:38:06] total 406564
[2025-10-12 12:38:06] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 05:04 pilot3.tar.gz
[2025-10-12 12:38:06] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 05:05 queuedata.json
[2025-10-12 12:38:06] -rwx------ 1 boincer umatlas     36292 Oct 12 05:06 runpilot2-wrapper.sh
[2025-10-12 12:38:06] -rw-r--r-- 1 boincer umatlas       100 Oct 12 11:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 12:38:06] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 11:24 run_atlas
[2025-10-12 12:38:06] -rw-r--r-- 1 boincer umatlas       105 Oct 12 11:24 job.xml
[2025-10-12 12:38:06] -rw-r--r-- 2 boincer umatlas 218307512 Oct 12 11:24 EVNT.46676267._003560.pool.root.1
[2025-10-12 12:38:06] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 11:24 start_atlas.sh
[2025-10-12 12:38:06] drwxrwx--x 2 boincer umatlas      4096 Oct 12 11:24 shared
[2025-10-12 12:38:06] -rw-r--r-- 2 boincer umatlas    569680 Oct 12 11:24 input.tar.gz
[2025-10-12 12:38:06] -rw-r--r-- 1 boincer umatlas         0 Oct 12 11:24 boinc_lockfile
[2025-10-12 12:38:06] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 11:24 pandaJob.out
[2025-10-12 12:38:06] -rw------- 1 boincer umatlas    975528 Oct 12 11:24 agis_schedconf.cvmfs.json
[2025-10-12 12:38:06] -rw------- 1 boincer umatlas   1560580 Oct 12 11:24 agis_ddmendpoints.agis.ALL.json
[2025-10-12 12:38:06] drwx------ 5 boincer umatlas      4096 Oct 12 11:24 pilot3
[2025-10-12 12:38:06] -rw-r--r-- 1 boincer umatlas      5951 Oct 12 12:28 init_data.xml
[2025-10-12 12:38:06] -rw------- 1 boincer umatlas 192068086 Oct 12 12:36 HITS.46676269._074997.pool.root.1
[2025-10-12 12:38:06] -rw-r--r-- 1 boincer umatlas       529 Oct 12 12:37 boinc_task_state.xml
[2025-10-12 12:38:06] -rw------- 1 boincer umatlas      1050 Oct 12 12:37 memory_monitor_summary.json
[2025-10-12 12:38:06] -rw------- 1 boincer umatlas    383324 Oct 12 12:37 log.46676269._074997.job.log.tgz.1
[2025-10-12 12:38:06] -rw------- 1 boincer umatlas        95 Oct 12 12:37 pilot_heartbeat.json
[2025-10-12 12:38:06] -rw------- 1 boincer umatlas      7851 Oct 12 12:37 heartbeat.json
[2025-10-12 12:38:06] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 12:37 boinc_mmap_file
[2025-10-12 12:38:06] -rw-r--r-- 1 boincer umatlas        27 Oct 12 12:37 wrapper_checkpoint.txt
[2025-10-12 12:38:06] -rw------- 1 boincer umatlas       860 Oct 12 12:38 pilotlog.txt
[2025-10-12 12:38:06] -rw------- 1 boincer umatlas    637405 Oct 12 12:38 log.46676269._074997.job.log.1
[2025-10-12 12:38:06] -rw------- 1 boincer umatlas       357 Oct 12 12:38 output.list
[2025-10-12 12:38:06] -rw-r--r-- 1 boincer umatlas       620 Oct 12 12:38 runtime_log
[2025-10-12 12:38:06] -rw------- 1 boincer umatlas   1044480 Oct 12 12:38 result.tar.gz
[2025-10-12 12:38:06] -rw-r--r-- 1 boincer umatlas      8700 Oct 12 12:38 runtime_log.err
[2025-10-12 12:38:06] -rw------- 1 boincer umatlas       658 Oct 12 12:38 BleMDmPD7R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8HjNDmqigC6m.diag
[2025-10-12 12:38:06] -rw-r--r-- 1 boincer umatlas     22509 Oct 12 12:38 stderr.txt
[2025-10-12 12:38:06] HITS file was successfully produced:
[2025-10-12 12:38:06] -rw------- 1 boincer umatlas 192068086 Oct 12 12:36 shared/HITS.pool.root.1
[2025-10-12 12:38:06]  *** Contents of shared directory: ***
[2025-10-12 12:38:06] total 402364
[2025-10-12 12:38:06] -rw-r--r-- 2 boincer umatlas 218307512 Oct 12 11:24 ATLAS.root_0
[2025-10-12 12:38:06] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 11:24 start_atlas.sh
[2025-10-12 12:38:06] -rw-r--r-- 2 boincer umatlas    569680 Oct 12 11:24 input.tar.gz
[2025-10-12 12:38:06] -rw------- 1 boincer umatlas 192068086 Oct 12 12:36 HITS.pool.root.1
[2025-10-12 12:38:06] -rw------- 1 boincer umatlas   1044480 Oct 12 12:38 result.tar.gz
12:38:07 (15121): run_atlas exited; CPU time 46763.926235
12:38:07 (15121): called boinc_finish(0)

</stderr_txt>
]]>

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