Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:17:01 (13444): wrapper (7.7.26015): starting
11:17:01 (13444): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 11:17:01] Arguments: --nthreads 12
[2025-10-12 11:17:01] Threads: 12
[2025-10-12 11:17:01] Checking for CVMFS
[2025-10-12 11:17:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 11:17:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 11:17:01] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 11:17:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 11:17:02] 2.11.2.0 14820 78395 87704 151625 0 56 15040534 20275201 1 130560 0 48933329 99.991 2503080 45549 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 11:17:02] CVMFS is ok
[2025-10-12 11:17:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 11:17:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 11:17:02] Further information can be found at the LHC@home message board.
[2025-10-12 11:17:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 11:17:02] Checking for apptainer binary...
[2025-10-12 11:17:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 11:17:02] Running /usr/bin/apptainer --version
[2025-10-12 11:17:02] apptainer version 1.3.2-1.el7
[2025-10-12 11:17:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 11:17:03] c-205-27.aglt2.org
[2025-10-12 11:17:03] apptainer works
[2025-10-12 11:17:03] Set ATHENA_PROC_NUMBER=12
[2025-10-12 11:17:03] Set ATHENA_CORE_NUMBER=12
[2025-10-12 11:17:03] Starting ATLAS job with PandaID=6839927899
[2025-10-12 11:17:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 12:34:34]  *** The last 200 lines of the pilot log: ***
[2025-10-12 12:34:34]  lfn=log.46676269._077438.job.log.tgz.1
[2025-10-12 12:34:34]  mtime=0
[2025-10-12 12:34:34]  protocol_id=None
[2025-10-12 12:34:34]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 12:34:34]  replicas=None
[2025-10-12 12:34:34]  scope=mc23_13p6TeV
[2025-10-12 12:34:34]  status=None
[2025-10-12 12:34:34]  status_code=0
[2025-10-12 12:34:34]  storage_token=
[2025-10-12 12:34:34]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6839927899/log.46676269._077438.job.log.tgz.1
[2025-10-12 12:34:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/53/ae/log.46676269._077438.job.log.tgz.1
[2025-10-12 12:34:34]  workdir=None
[2025-10-12 12:34:34] ]
[2025-10-12 12:34:34] 2025-10-12 16:33:54,983 | INFO     | transferring file log.46676269._077438.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6839927899/log.46676269._077438.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 12:34:34] 2025-10-12 16:33:54,984 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6839927899/log.46676269._077438.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._077438.job
[2025-10-12 12:34:34] 2025-10-12 16:33:55,006 | INFO     | adding to output.list: log.46676269._077438.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/53/ae/log.46676269._077438.job.log.tg
[2025-10-12 12:34:34] 2025-10-12 16:33:55,007 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 12:34:34] 2025-10-12 16:33:55,007 | INFO     | summary of transferred files:
[2025-10-12 12:34:34] 2025-10-12 16:33:55,007 | INFO     |  -- lfn=log.46676269._077438.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 12:34:34] 2025-10-12 16:33:55,007 | INFO     | stage-out finished correctly
[2025-10-12 12:34:34] 2025-10-12 16:33:56,238 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 12:34:34] 2025-10-12 16:33:56,933 | INFO     | time since job start (4598s) is within the limit (172800.0s)
[2025-10-12 12:34:34] 2025-10-12 16:33:57,636 | INFO     | job 6839927899 has state=finished
[2025-10-12 12:34:34] 2025-10-12 16:33:57,636 | INFO     | preparing for final server update for job 6839927899 in state='finished'
[2025-10-12 12:34:34] 2025-10-12 16:33:57,637 | INFO     | this job has now completed (state=finished)
[2025-10-12 12:34:34] 2025-10-12 16:33:57,637 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 12:34:34] 2025-10-12 16:33:57,637 | INFO     | log transfer has been attempted: DONE
[2025-10-12 12:34:34] 2025-10-12 16:33:57,638 | INFO     | job 6839927899 has finished - writing final server update
[2025-10-12 12:34:34] 2025-10-12 16:33:57,638 | INFO     | total number of processed events: 400 (read)
[2025-10-12 12:34:34] 2025-10-12 16:33:57,639 | INFO     | executing command: lscpu
[2025-10-12 12:34:34] 2025-10-12 16:33:57,664 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 12:34:34] 2025-10-12 16:33:58,939 | INFO     | time since job start (4600s) is within the limit (172800.0s)
[2025-10-12 12:34:34] 2025-10-12 16:34:00,092 | WARNING  | process 23552 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 12:34:34] 2025-10-12 16:34:00,092 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839927899/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 12:34:34] 2025-10-12 16:34:00,181 | INFO     | number of running child processes to parent process 23552: 1
[2025-10-12 12:34:34] 2025-10-12 16:34:00,182 | INFO     | maximum number of monitored processes: 6
[2025-10-12 12:34:34] 2025-10-12 16:34:00,944 | INFO     | time since job start (4602s) is within the limit (172800.0s)
[2025-10-12 12:34:34] 2025-10-12 16:34:02,442 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 12:34:34] 2025-10-12 16:34:02,446 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-10-12 12:34:34] 2025-10-12 16:34:02,448 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839927899/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 12:34:34] 2025-10-12 16:34:02,488 | INFO     | extracted standard info from prmon json
[2025-10-12 12:34:34] 2025-10-12 16:34:02,488 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 12:34:34] 2025-10-12 16:34:02,488 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 12:34:34] 2025-10-12 16:34:02,489 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 12:34:34] 2025-10-12 16:34:02,489 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 12:34:34] 2025-10-12 16:34:02,490 | INFO     | fitting pss+swap vs Time
[2025-10-12 12:34:34] 2025-10-12 16:34:02,490 | INFO     | sum of square deviations: 97479037.0
[2025-10-12 12:34:34] 2025-10-12 16:34:02,491 | INFO     | sum of deviations: 781667786.0000002
[2025-10-12 12:34:34] 2025-10-12 16:34:02,491 | INFO     | mean x: 1760284615.5
[2025-10-12 12:34:34] 2025-10-12 16:34:02,491 | INFO     | mean y: 2960832.2352941176
[2025-10-12 12:34:34] 2025-10-12 16:34:02,491 | INFO     | -- intersect: -14112461523.934952
[2025-10-12 12:34:34] 2025-10-12 16:34:02,491 | INFO     | intersect: -14112461523.934952
[2025-10-12 12:34:34] 2025-10-12 16:34:02,491 | INFO     | chi2: 0.02630561981932382
[2025-10-12 12:34:34] 2025-10-12 16:34:02,492 | INFO     | -- intersect: -14112461523.934952
[2025-10-12 12:34:34] 2025-10-12 16:34:02,492 | INFO     | current memory leak: 8.02 B/s (using 68 data points, chi2=0.03)
[2025-10-12 12:34:34] 2025-10-12 16:34:02,492 | INFO     | could have reported an average CPU frequency of 2054 MHz (6 samples)
[2025-10-12 12:34:34] 2025-10-12 16:34:02,492 | INFO     | ..............................
[2025-10-12 12:34:34] 2025-10-12 16:34:02,492 | INFO     | . Timing measurements:
[2025-10-12 12:34:34] 2025-10-12 16:34:02,492 | INFO     | . get job = 0 s
[2025-10-12 12:34:34] 2025-10-12 16:34:02,492 | INFO     | . initial setup = 2 s
[2025-10-12 12:34:34] 2025-10-12 16:34:02,493 | INFO     | . payload setup = 7 s
[2025-10-12 12:34:34] 2025-10-12 16:34:02,493 | INFO     | . stage-in = 0 s
[2025-10-12 12:34:34] 2025-10-12 16:34:02,493 | INFO     | . payload execution = 4568 s
[2025-10-12 12:34:34] 2025-10-12 16:34:02,493 | INFO     | . stage-out = 0 s
[2025-10-12 12:34:34] 2025-10-12 16:34:02,493 | INFO     | . log creation = 0 s
[2025-10-12 12:34:34] 2025-10-12 16:34:02,493 | INFO     | ..............................
[2025-10-12 12:34:34] 2025-10-12 16:34:02,738 | INFO     | 
[2025-10-12 12:34:34] 2025-10-12 16:34:02,739 | INFO     | job summary report
[2025-10-12 12:34:34] 2025-10-12 16:34:02,739 | INFO     | --------------------------------------------------
[2025-10-12 12:34:34] 2025-10-12 16:34:02,739 | INFO     | PanDA job id: 6839927899
[2025-10-12 12:34:34] 2025-10-12 16:34:02,739 | INFO     | task id: 46676269
[2025-10-12 12:34:34] 2025-10-12 16:34:02,739 | INFO     | errors: (none)
[2025-10-12 12:34:34] 2025-10-12 16:34:02,740 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 12:34:34] 2025-10-12 16:34:02,740 | INFO     | pilot state: finished 
[2025-10-12 12:34:34] 2025-10-12 16:34:02,740 | INFO     | transexitcode: 0
[2025-10-12 12:34:34] 2025-10-12 16:34:02,740 | INFO     | exeerrorcode: 0
[2025-10-12 12:34:34] 2025-10-12 16:34:02,740 | INFO     | exeerrordiag: 
[2025-10-12 12:34:34] 2025-10-12 16:34:02,740 | INFO     | exitcode: 0
[2025-10-12 12:34:34] 2025-10-12 16:34:02,741 | INFO     | exitmsg: OK
[2025-10-12 12:34:34] 2025-10-12 16:34:02,741 | INFO     | cpuconsumptiontime: 48356 s
[2025-10-12 12:34:34] 2025-10-12 16:34:02,741 | INFO     | nevents: 400
[2025-10-12 12:34:34] 2025-10-12 16:34:02,741 | INFO     | neventsw: 0
[2025-10-12 12:34:34] 2025-10-12 16:34:02,741 | INFO     | pid: 23552
[2025-10-12 12:34:34] 2025-10-12 16:34:02,741 | INFO     | pgrp: 23552
[2025-10-12 12:34:34] 2025-10-12 16:34:02,742 | INFO     | corecount: 12
[2025-10-12 12:34:34] 2025-10-12 16:34:02,742 | INFO     | event service: False
[2025-10-12 12:34:34] 2025-10-12 16:34:02,742 | INFO     | sizes: {0: 2348857, 5: 2349119, 11: 2349175, 4578: 2375309, 4579: 2375308, 4580: 2384362, 4581: 2384546, 4588: 2384740}
[2025-10-12 12:34:34] 2025-10-12 16:34:02,742 | INFO     | --------------------------------------------------
[2025-10-12 12:34:34] 2025-10-12 16:34:02,742 | INFO     | 
[2025-10-12 12:34:34] 2025-10-12 16:34:02,742 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 12:34:34] 2025-10-12 16:34:02,765 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 12:34:34] 2025-10-12 16:34:02,765 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 12:34:34] 2025-10-12 16:34:02,765 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 12:34:34] 2025-10-12 16:34:02,765 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 12:34:34] 2025-10-12 16:34:02,765 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 12:34:34] 2025-10-12 16:34:02,766 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 12:34:34] 2025-10-12 16:34:02,766 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 12:34:34] 2025-10-12 16:34:02,766 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 12:34:34] 2025-10-12 16:34:02,766 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 12:34:34] 2025-10-12 16:34:02,766 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 12:34:34] 2025-10-12 16:34:02,767 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 12:34:34] 2025-10-12 16:34:02,767 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 12:34:34] 2025-10-12 16:34:02,767 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 12:34:34] 2025-10-12 16:34:02,767 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 12:34:34] 2025-10-12 16:34:02,767 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 12:34:34] 2025-10-12 16:34:02,767 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 12:34:34] 2025-10-12 16:34:02,768 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 12:34:34] 2025-10-12 16:34:02,768 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 12:34:34] 2025-10-12 16:34:02,768 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 12:34:34] 2025-10-12 16:34:02,768 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 12:34:34] 2025-10-12 16:34:02,768 | INFO     | job 6839927899 has completed (purged errors)
[2025-10-12 12:34:34] 2025-10-12 16:34:02,768 | INFO     | overall cleanup function is called
[2025-10-12 12:34:34] 2025-10-12 16:34:03,776 | INFO     | --- collectZombieJob: --- 10, [23552]
[2025-10-12 12:34:34] 2025-10-12 16:34:03,776 | INFO     | zombie collector waiting for pid 23552
[2025-10-12 12:34:34] 2025-10-12 16:34:03,777 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 12:34:34] 2025-10-12 16:34:03,777 | INFO     | collected zombie processes
[2025-10-12 12:34:34] 2025-10-12 16:34:03,777 | INFO     | will attempt to kill all subprocesses of pid=23552
[2025-10-12 12:34:34] 2025-10-12 16:34:03,870 | INFO     | process IDs to be killed: [23552] (in reverse order)
[2025-10-12 12:34:34] 2025-10-12 16:34:03,920 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 12:34:34] 2025-10-12 16:34:03,920 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 12:34:34] 2025-10-12 16:34:03,924 | INFO     | did not find any defunct processes belonging to 23552
[2025-10-12 12:34:34] 2025-10-12 16:34:03,928 | INFO     | did not find any defunct processes belonging to 23552
[2025-10-12 12:34:34] 2025-10-12 16:34:03,928 | INFO     | ready for new job
[2025-10-12 12:34:34] 2025-10-12 16:34:03,928 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 12:34:34] 2025-10-12 16:34:03,929 | INFO     | ***************************************
[2025-10-12 12:34:34] 2025-10-12 16:34:03,929 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 12:34:34] 2025-10-12 16:34:03,929 | INFO     | ***************************************
[2025-10-12 12:34:34] 2025-10-12 16:34:03,929 | INFO     | 
[2025-10-12 12:34:34] 2025-10-12 16:34:03,930 | INFO     | architecture information:
[2025-10-12 12:34:34] 2025-10-12 16:34:03,930 | INFO     | executing command: cat /etc/os-release
[2025-10-12 12:34:34] 2025-10-12 16:34:03,945 | INFO     | cat /etc/os-release:
[2025-10-12 12:34:34] NAME="CentOS Linux"
[2025-10-12 12:34:34] VERSION="7 (Core)"
[2025-10-12 12:34:34] ID="centos"
[2025-10-12 12:34:34] ID_LIKE="rhel fedora"
[2025-10-12 12:34:34] VERSION_ID="7"
[2025-10-12 12:34:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 12:34:34] ANSI_COLOR="0;31"
[2025-10-12 12:34:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 12:34:34] HOME_URL="https://www.centos.org/"
[2025-10-12 12:34:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 12:34:34] 
[2025-10-12 12:34:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 12:34:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 12:34:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 12:34:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 12:34:34] 
[2025-10-12 12:34:34] 2025-10-12 16:34:03,945 | INFO     | ***************************************
[2025-10-12 12:34:34] 2025-10-12 16:34:04,448 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 12:34:34] 2025-10-12 16:34:04,465 | INFO     | sufficient remaining disk space (29368516608 B)
[2025-10-12 12:34:34] 2025-10-12 16:34:04,466 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 12:34:34] 2025-10-12 16:34:04,466 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 12:34:34] 2025-10-12 16:34:04,466 | INFO     | update_server=False
[2025-10-12 12:34:34] 2025-10-12 16:34:04,466 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 12:34:34] 2025-10-12 16:34:04,467 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:34:34] 2025-10-12 16:34:04,467 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:34:34] 2025-10-12 16:34:04,467 | INFO     | aborting loop
[2025-10-12 12:34:34] 2025-10-12 16:34:04,763 | INFO     | all data control threads have been joined
[2025-10-12 12:34:34] 2025-10-12 16:34:04,924 | INFO     | all job control threads have been joined
[2025-10-12 12:34:34] 2025-10-12 16:34:05,472 | INFO     | [job] retrieve thread has finished
[2025-10-12 12:34:34] 2025-10-12 16:34:05,472 | INFO     | [job] queue monitor thread has finished
[2025-10-12 12:34:34] 2025-10-12 16:34:05,473 | INFO     | [job] job monitor thread has finished
[2025-10-12 12:34:34] 2025-10-12 16:34:05,569 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 12:34:34] 2025-10-12 16:34:05,573 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 12:34:34] 2025-10-12 16:34:05,605 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 12:34:34] 2025-10-12 16:34:05,718 | INFO     | [payload] validate_post thread has finished
[2025-10-12 12:34:34] 2025-10-12 16:34:05,737 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 12:34:34] 2025-10-12 16:34:05,769 | INFO     | [data] control thread has finished
[2025-10-12 12:34:34] 2025-10-12 16:34:05,797 | INFO     | all payload control threads have been joined
[2025-10-12 12:34:34] 2025-10-12 16:34:05,929 | INFO     | [job] control thread has finished
[2025-10-12 12:34:34] 2025-10-12 16:34:06,201 | INFO     | [data] copytool_in thread has finished
[2025-10-12 12:34:34] 2025-10-12 16:34:06,359 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 12:34:34] 2025-10-12 16:34:06,765 | INFO     | [job] validate thread has finished
[2025-10-12 12:34:34] 2025-10-12 16:34:06,802 | INFO     | [payload] control thread has finished
[2025-10-12 12:34:34] 2025-10-12 16:34:06,826 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 12:34:34] 2025-10-12 16:34:06,951 | INFO     | [payload] failed_post thread has finished
[2025-10-12 12:34:34] 2025-10-12 16:34:07,610 | INFO     | [data] copytool_out thread has finished
[2025-10-12 12:34:34] 2025-10-12 16:34:10,832 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 12:34:34] 2025-10-12 16:34:25,373 | INFO     | [monitor] cgroup control has ended
[2025-10-12 12:34:34] 2025-10-12 16:34:25,687 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140151997933376)>', '<ExcThread(monitor, started 140151258855168)>']
[2025-10-12 12:34:34] 2025-10-12 16:34:30,699 | INFO     | all workflow threads have been joined
[2025-10-12 12:34:34] 2025-10-12 16:34:30,699 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 12:34:34] 2025-10-12 16:34:30,700 | INFO     | traces error code: 0
[2025-10-12 12:34:34] 2025-10-12 16:34:30,700 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 12:34:34] 2025-10-12 16:34:34,146 | INFO     | PID=17187 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 12:34:34] 2025-10-12 16:34:34,147 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 12:34:34] 2025-10-12 16:34:34,147 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 12:34:34] 2025-10-12 16:34:34,148 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 12:34:34] 2025-10-12 16:34:34,148 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 12:34:34] 2025-10-12 16:34:34,148 | INFO     | [monitor] control thread has ended
[2025-10-12 12:34:34] 2025-10-12 16:34:34,244 [wrapper] ==== pilot stdout END ====
[2025-10-12 12:34:34] 2025-10-12 16:34:34,248 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 12:34:34] 2025-10-12 16:34:34,252 [wrapper] pilotpid: 17187
[2025-10-12 12:34:34] 2025-10-12 16:34:34,255 [wrapper] Pilot exit status: 0
[2025-10-12 12:34:34] 2025-10-12 16:34:34,270 [wrapper] pandaids: 6839927899
[2025-10-12 12:34:34] 2025-10-12 16:34:34,312 [wrapper] cleanup supervisor_pilot  2772 17188
[2025-10-12 12:34:34] 2025-10-12 16:34:34,316 [wrapper] Test setup, not cleaning
[2025-10-12 12:34:34] 2025-10-12 16:34:34,320 [wrapper] apfmon messages muted
[2025-10-12 12:34:34] 2025-10-12 16:34:34,324 [wrapper] ==== wrapper stdout END ====
[2025-10-12 12:34:34] 2025-10-12 16:34:34,328 [wrapper] ==== wrapper stderr END ====
[2025-10-12 12:34:34]  *** Error codes and diagnostics ***
[2025-10-12 12:34:34]     "exeErrorCode": 0,
[2025-10-12 12:34:34]     "exeErrorDiag": "",
[2025-10-12 12:34:34]     "pilotErrorCode": 0,
[2025-10-12 12:34:34]     "pilotErrorDiag": "",
[2025-10-12 12:34:34]  *** Listing of results directory ***
[2025-10-12 12:34:34] total 409784
[2025-10-12 12:34:34] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 07:54 queuedata.json
[2025-10-12 12:34:34] -rwx------ 1 boincer umatlas     36292 Oct 12 07:54 runpilot2-wrapper.sh
[2025-10-12 12:34:34] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 07:54 pilot3.tar.gz
[2025-10-12 12:34:34] -rw-r--r-- 1 boincer umatlas       100 Oct 12 11:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 12:34:34] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 11:17 run_atlas
[2025-10-12 12:34:34] -rw-r--r-- 1 boincer umatlas       105 Oct 12 11:17 job.xml
[2025-10-12 12:34:34] -rw-r--r-- 2 boincer umatlas 220300056 Oct 12 11:17 EVNT.46676267._003707.pool.root.1
[2025-10-12 12:34:34] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 11:17 start_atlas.sh
[2025-10-12 12:34:34] drwxrwx--x 2 boincer umatlas      4096 Oct 12 11:17 shared
[2025-10-12 12:34:34] -rw-r--r-- 2 boincer umatlas    569677 Oct 12 11:17 input.tar.gz
[2025-10-12 12:34:34] -rw-r--r-- 1 boincer umatlas         0 Oct 12 11:17 boinc_lockfile
[2025-10-12 12:34:34] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 11:17 pandaJob.out
[2025-10-12 12:34:34] -rw------- 1 boincer umatlas    975528 Oct 12 11:17 agis_schedconf.cvmfs.json
[2025-10-12 12:34:34] -rw------- 1 boincer umatlas   1560580 Oct 12 11:17 agis_ddmendpoints.agis.ALL.json
[2025-10-12 12:34:34] drwx------ 5 boincer umatlas      4096 Oct 12 11:17 pilot3
[2025-10-12 12:34:34] -rw-r--r-- 1 boincer umatlas      5952 Oct 12 12:27 init_data.xml
[2025-10-12 12:34:34] -rw-r--r-- 1 boincer umatlas       529 Oct 12 12:33 boinc_task_state.xml
[2025-10-12 12:34:34] -rw------- 1 boincer umatlas 193328566 Oct 12 12:33 HITS.46676269._077438.pool.root.1
[2025-10-12 12:34:34] -rw------- 1 boincer umatlas      1048 Oct 12 12:33 memory_monitor_summary.json
[2025-10-12 12:34:34] -rw------- 1 boincer umatlas    380877 Oct 12 12:33 log.46676269._077438.job.log.tgz.1
[2025-10-12 12:34:34] -rw------- 1 boincer umatlas      7866 Oct 12 12:34 heartbeat.json
[2025-10-12 12:34:34] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 12:34 boinc_mmap_file
[2025-10-12 12:34:34] -rw-r--r-- 1 boincer umatlas        27 Oct 12 12:34 wrapper_checkpoint.txt
[2025-10-12 12:34:34] -rw------- 1 boincer umatlas        95 Oct 12 12:34 pilot_heartbeat.json
[2025-10-12 12:34:34] -rw------- 1 boincer umatlas       745 Oct 12 12:34 pilotlog.txt
[2025-10-12 12:34:34] -rw------- 1 boincer umatlas    666977 Oct 12 12:34 log.46676269._077438.job.log.1
[2025-10-12 12:34:34] -rw------- 1 boincer umatlas       357 Oct 12 12:34 output.list
[2025-10-12 12:34:34] -rw-r--r-- 1 boincer umatlas       620 Oct 12 12:34 runtime_log
[2025-10-12 12:34:34] -rw------- 1 boincer umatlas   1064960 Oct 12 12:34 result.tar.gz
[2025-10-12 12:34:34] -rw------- 1 boincer umatlas       659 Oct 12 12:34 v33KDm6p9R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmCnTMDm7Zevqn.diag
[2025-10-12 12:34:34] -rw-r--r-- 1 boincer umatlas      8705 Oct 12 12:34 runtime_log.err
[2025-10-12 12:34:34] -rw-r--r-- 1 boincer umatlas     21639 Oct 12 12:34 stderr.txt
[2025-10-12 12:34:34] HITS file was successfully produced:
[2025-10-12 12:34:34] -rw------- 1 boincer umatlas 193328566 Oct 12 12:33 shared/HITS.pool.root.1
[2025-10-12 12:34:34]  *** Contents of shared directory: ***
[2025-10-12 12:34:34] total 405560
[2025-10-12 12:34:34] -rw-r--r-- 2 boincer umatlas 220300056 Oct 12 11:17 ATLAS.root_0
[2025-10-12 12:34:34] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 11:17 start_atlas.sh
[2025-10-12 12:34:34] -rw-r--r-- 2 boincer umatlas    569677 Oct 12 11:17 input.tar.gz
[2025-10-12 12:34:34] -rw------- 1 boincer umatlas 193328566 Oct 12 12:33 HITS.pool.root.1
[2025-10-12 12:34:34] -rw------- 1 boincer umatlas   1064960 Oct 12 12:34 result.tar.gz
12:34:35 (13444): run_atlas exited; CPU time 48336.512341
12:34:35 (13444): called boinc_finish(0)

</stderr_txt>
]]>

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