Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:21:56 (861104): wrapper (7.7.26015): starting
11:21:56 (861104): wrapper: running run_atlas (--nthreads 10)
[2025-10-12 11:21:56] Arguments: --nthreads 10
[2025-10-12 11:21:56] Threads: 10
[2025-10-12 11:21:56] Checking for CVMFS
[2025-10-12 11:21:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 11:21:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 11:21:57] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 11:22:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 11:22:17] 2.13.2.0 1387712 18711 239484 151625 0 527 18811442 32935937 18840 16776704 0 46377626 99.623 45442165 29068 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 11:22:17] CVMFS is ok
[2025-10-12 11:22:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 11:22:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 11:22:17] Further information can be found at the LHC@home message board.
[2025-10-12 11:22:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 11:22:17] Checking for apptainer binary...
[2025-10-12 11:22:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 11:22:17] Running /usr/bin/apptainer --version
[2025-10-12 11:22:17] apptainer version 1.4.3-1.el9
[2025-10-12 11:22:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 11:22:18] c6-2-29-3.aglt2.org
[2025-10-12 11:22:18] apptainer works
[2025-10-12 11:22:18] Set ATHENA_PROC_NUMBER=10
[2025-10-12 11:22:18] Set ATHENA_CORE_NUMBER=10
[2025-10-12 11:22:18] Starting ATLAS job with PandaID=6839868709
[2025-10-12 11:22:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 18:57:58]  *** The last 200 lines of the pilot log: ***
[2025-10-12 18:57:59] 2025-10-12 22:56:44,240 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 18:57:59] 2025-10-12 22:56:44,240 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:57:59] 2025-10-12 22:56:44,298 | INFO     | fitting pss+swap vs Time
[2025-10-12 18:57:59] 2025-10-12 22:56:44,299 | INFO     | sum of square deviations: 27139771217.639496
[2025-10-12 18:57:59] 2025-10-12 22:56:44,330 | INFO     | sum of deviations: 692617500.4414368
[2025-10-12 18:57:59] 2025-10-12 22:56:44,330 | INFO     | mean x: 1760296181.2342343
[2025-10-12 18:57:59] 2025-10-12 22:56:44,330 | INFO     | mean y: 2203374.063063063
[2025-10-12 18:57:59] 2025-10-12 22:56:44,330 | INFO     | -- intersect: -42720068.04357617
[2025-10-12 18:57:59] 2025-10-12 22:56:44,330 | INFO     | intersect: -42720068.04357617
[2025-10-12 18:57:59] 2025-10-12 22:56:44,365 | INFO     | chi2: 2.5932377752021782
[2025-10-12 18:57:59] 2025-10-12 22:56:44,366 | INFO     | sum of square deviations: 26233176100.874725
[2025-10-12 18:57:59] 2025-10-12 22:56:44,406 | INFO     | sum of deviations: 25707617849.11393
[2025-10-12 18:57:59] 2025-10-12 22:56:44,406 | INFO     | mean x: 1760296028.738041
[2025-10-12 18:57:59] 2025-10-12 22:56:44,406 | INFO     | mean y: 2207546.783599089
[2025-10-12 18:57:59] 2025-10-12 22:56:44,406 | INFO     | -- intersect: -1722822523.3115542
[2025-10-12 18:57:59] 2025-10-12 22:56:44,406 | INFO     | intersect: -1722822523.3115542
[2025-10-12 18:57:59] 2025-10-12 22:56:44,407 | INFO     | chi2: 1.9159992271322839
[2025-10-12 18:57:59] 2025-10-12 22:56:44,407 | INFO     | current chi2=1.9159992271322839 (change=26.115559265177463 %)
[2025-10-12 18:57:59] 2025-10-12 22:56:44,408 | INFO     | sum of square deviations: 25346973193.07839
[2025-10-12 18:57:59] 2025-10-12 22:56:44,449 | INFO     | sum of deviations: 28843297422.70509
[2025-10-12 18:57:59] 2025-10-12 22:56:44,450 | INFO     | mean x: 1760295876.2396314
[2025-10-12 18:57:59] 2025-10-12 22:56:44,450 | INFO     | mean y: 2208082.6566820275
[2025-10-12 18:57:59] 2025-10-12 22:56:44,450 | INFO     | -- intersect: -2000900419.6320922
[2025-10-12 18:57:59] 2025-10-12 22:56:44,450 | INFO     | intersect: -2000900419.6320922
[2025-10-12 18:57:59] 2025-10-12 22:56:44,450 | INFO     | chi2: 1.9083919541624985
[2025-10-12 18:57:59] 2025-10-12 22:56:44,451 | INFO     | current chi2=1.9083919541624985 (change=0.3970394592053842 %)
[2025-10-12 18:57:59] 2025-10-12 22:56:44,451 | INFO     | right removable region: 433
[2025-10-12 18:57:59] 2025-10-12 22:56:44,484 | INFO     | sum of square deviations: 26233031529.91341
[2025-10-12 18:57:59] 2025-10-12 22:56:44,527 | INFO     | sum of deviations: -70246217716.35759
[2025-10-12 18:57:59] 2025-10-12 22:56:44,527 | INFO     | mean x: 1760296333.7425969
[2025-10-12 18:57:59] 2025-10-12 22:56:44,527 | INFO     | mean y: 2215259.1207289295
[2025-10-12 18:57:59] 2025-10-12 22:56:44,527 | INFO     | -- intersect: 4715896915.180427
[2025-10-12 18:57:59] 2025-10-12 22:56:44,527 | INFO     | intersect: 4715896915.180427
[2025-10-12 18:57:59] 2025-10-12 22:56:44,528 | INFO     | chi2: 0.9597768258346812
[2025-10-12 18:57:59] 2025-10-12 22:56:44,528 | INFO     | current chi2=0.9597768258346812 (change=62.98924707126582 %)
[2025-10-12 18:57:59] 2025-10-12 22:56:44,529 | INFO     | sum of square deviations: 25346790924.11063
[2025-10-12 18:57:59] 2025-10-12 22:56:44,566 | INFO     | sum of deviations: -67605319042.34099
[2025-10-12 18:57:59] 2025-10-12 22:56:44,566 | INFO     | mean x: 1760296486.2442396
[2025-10-12 18:57:59] 2025-10-12 22:56:44,566 | INFO     | mean y: 2214806.16359447
[2025-10-12 18:57:59] 2025-10-12 22:56:44,566 | INFO     | -- intersect: 4697302476.944517
[2025-10-12 18:57:59] 2025-10-12 22:56:44,566 | INFO     | intersect: 4697302476.944517
[2025-10-12 18:57:59] 2025-10-12 22:56:44,603 | INFO     | chi2: 0.9574571858035914
[2025-10-12 18:57:59] 2025-10-12 22:56:44,604 | INFO     | current chi2=0.9574571858035914 (change=0.24168535524625231 %)
[2025-10-12 18:57:59] 2025-10-12 22:56:44,604 | INFO     | left removable region: 20
[2025-10-12 18:57:59] 2025-10-12 22:56:44,604 | INFO     | sum of square deviations: 21842485640.304996
[2025-10-12 18:57:59] 2025-10-12 22:56:44,644 | INFO     | sum of deviations: -35895440682.47459
[2025-10-12 18:57:59] 2025-10-12 22:56:44,645 | INFO     | mean x: 1760296455.7457628
[2025-10-12 18:57:59] 2025-10-12 22:56:44,645 | INFO     | mean y: 2219215.871670702
[2025-10-12 18:57:59] 2025-10-12 22:56:44,645 | INFO     | -- intersect: 2895050098.36962
[2025-10-12 18:57:59] 2025-10-12 22:56:44,645 | INFO     | intersect: 2895050098.36962
[2025-10-12 18:57:59] 2025-10-12 22:56:44,645 | INFO     | chi2: 0.2539163591443394
[2025-10-12 18:57:59] 2025-10-12 22:56:44,646 | INFO     | -- intersect: 2895050098.36962
[2025-10-12 18:57:59] 2025-10-12 22:56:44,646 | INFO     | current memory leak: -1.64 B/s (using 413 data points, chi2=0.25)
[2025-10-12 18:57:59] 2025-10-12 22:56:44,646 | INFO     | could have reported an average CPU frequency of 2665 MHz (18 samples)
[2025-10-12 18:57:59] 2025-10-12 22:56:44,647 | INFO     | ..............................
[2025-10-12 18:57:59] 2025-10-12 22:56:44,647 | INFO     | . Timing measurements:
[2025-10-12 18:57:59] 2025-10-12 22:56:44,676 | INFO     | . get job = 0 s
[2025-10-12 18:57:59] 2025-10-12 22:56:44,676 | INFO     | . initial setup = 4 s
[2025-10-12 18:57:59] 2025-10-12 22:56:44,676 | INFO     | . payload setup = 25 s
[2025-10-12 18:57:59] 2025-10-12 22:56:44,677 | INFO     | . stage-in = 0 s
[2025-10-12 18:57:59] 2025-10-12 22:56:44,678 | INFO     | . payload execution = 27092 s
[2025-10-12 18:57:59] 2025-10-12 22:56:44,678 | INFO     | . stage-out = 11 s
[2025-10-12 18:57:59] 2025-10-12 22:56:44,678 | INFO     | . log creation = 2 s
[2025-10-12 18:57:59] 2025-10-12 22:56:44,678 | INFO     | ..............................
[2025-10-12 18:57:59] 2025-10-12 22:56:45,469 | INFO     | time since job start (27227s) is within the limit (172800.0s)
[2025-10-12 18:57:59] 2025-10-12 22:56:45,645 | INFO     | 
[2025-10-12 18:57:59] 2025-10-12 22:56:45,645 | INFO     | job summary report
[2025-10-12 18:57:59] 2025-10-12 22:56:45,646 | INFO     | --------------------------------------------------
[2025-10-12 18:57:59] 2025-10-12 22:56:45,646 | INFO     | PanDA job id: 6839868709
[2025-10-12 18:57:59] 2025-10-12 22:56:45,646 | INFO     | task id: 46676269
[2025-10-12 18:57:59] 2025-10-12 22:56:45,646 | INFO     | errors: (none)
[2025-10-12 18:57:59] 2025-10-12 22:56:45,646 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 18:57:59] 2025-10-12 22:56:45,646 | INFO     | pilot state: finished 
[2025-10-12 18:57:59] 2025-10-12 22:56:45,646 | INFO     | transexitcode: 0
[2025-10-12 18:57:59] 2025-10-12 22:56:45,646 | INFO     | exeerrorcode: 0
[2025-10-12 18:57:59] 2025-10-12 22:56:45,646 | INFO     | exeerrordiag: 
[2025-10-12 18:57:59] 2025-10-12 22:56:45,646 | INFO     | exitcode: 0
[2025-10-12 18:57:59] 2025-10-12 22:56:45,647 | INFO     | exitmsg: OK
[2025-10-12 18:57:59] 2025-10-12 22:56:45,647 | INFO     | cpuconsumptiontime: 46772 s
[2025-10-12 18:57:59] 2025-10-12 22:56:45,647 | INFO     | nevents: 400
[2025-10-12 18:57:59] 2025-10-12 22:56:45,647 | INFO     | neventsw: 0
[2025-10-12 18:57:59] 2025-10-12 22:56:45,647 | INFO     | pid: 884923
[2025-10-12 18:57:59] 2025-10-12 22:56:45,647 | INFO     | pgrp: 884923
[2025-10-12 18:57:59] 2025-10-12 22:56:45,647 | INFO     | corecount: 10
[2025-10-12 18:57:59] 2025-10-12 22:56:45,647 | INFO     | event service: False
[2025-10-12 18:57:59] 2025-10-12 22:56:45,647 | INFO     | sizes: {0: 2348857, 1: 2348857, 11: 2348885, 17: 2349175, 22: 2349203, 27123: 2385532, 27125: 2385659, 27137: 2394713, 27138: 2394769, 27185: 2394963}
[2025-10-12 18:57:59] 2025-10-12 22:56:45,647 | INFO     | --------------------------------------------------
[2025-10-12 18:57:59] 2025-10-12 22:56:45,648 | INFO     | 
[2025-10-12 18:57:59] 2025-10-12 22:56:45,648 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 18:57:59] 2025-10-12 22:56:45,925 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 18:57:59] 2025-10-12 22:56:45,928 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 18:57:59] 2025-10-12 22:56:45,928 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 18:57:59] 2025-10-12 22:56:45,928 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 18:57:59] 2025-10-12 22:56:45,928 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 18:57:59] 2025-10-12 22:56:45,928 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 18:57:59] 2025-10-12 22:56:45,929 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 18:57:59] 2025-10-12 22:56:45,929 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 18:57:59] 2025-10-12 22:56:45,929 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 18:57:59] 2025-10-12 22:56:45,966 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 18:57:59] 2025-10-12 22:56:45,967 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 18:57:59] 2025-10-12 22:56:45,967 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 18:57:59] 2025-10-12 22:56:45,967 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 18:57:59] 2025-10-12 22:56:45,967 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 18:57:59] 2025-10-12 22:56:45,967 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 18:57:59] 2025-10-12 22:56:45,967 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 18:57:59] 2025-10-12 22:56:45,967 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 18:57:59] 2025-10-12 22:56:45,967 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 18:57:59] 2025-10-12 22:56:45,967 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 18:57:59] 2025-10-12 22:56:45,968 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 18:57:59] 2025-10-12 22:56:45,968 | INFO     | job 6839868709 has completed (purged errors)
[2025-10-12 18:57:59] 2025-10-12 22:56:45,968 | INFO     | overall cleanup function is called
[2025-10-12 18:57:59] 2025-10-12 22:56:47,026 | INFO     | --- collectZombieJob: --- 10, [884923]
[2025-10-12 18:57:59] 2025-10-12 22:56:47,026 | INFO     | zombie collector waiting for pid 884923
[2025-10-12 18:57:59] 2025-10-12 22:56:47,026 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 18:57:59] 2025-10-12 22:56:47,027 | INFO     | collected zombie processes
[2025-10-12 18:57:59] 2025-10-12 22:56:47,027 | INFO     | will attempt to kill all subprocesses of pid=884923
[2025-10-12 18:57:59] 2025-10-12 22:56:50,906 | INFO     | process IDs to be killed: [884923] (in reverse order)
[2025-10-12 18:57:59] 2025-10-12 22:56:51,081 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 18:57:59] 2025-10-12 22:56:51,081 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 18:57:59] 2025-10-12 22:56:51,106 | INFO     | did not find any defunct processes belonging to 884923
[2025-10-12 18:57:59] 2025-10-12 22:56:51,132 | INFO     | did not find any defunct processes belonging to 884923
[2025-10-12 18:57:59] 2025-10-12 22:56:51,132 | INFO     | ready for new job
[2025-10-12 18:57:59] 2025-10-12 22:56:51,132 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 18:57:59] 2025-10-12 22:56:51,139 | INFO     | ***************************************
[2025-10-12 18:57:59] 2025-10-12 22:56:51,139 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 18:57:59] 2025-10-12 22:56:51,139 | INFO     | ***************************************
[2025-10-12 18:57:59] 2025-10-12 22:56:51,140 | INFO     | 
[2025-10-12 18:57:59] 2025-10-12 22:56:51,147 | INFO     | architecture information:
[2025-10-12 18:57:59] 2025-10-12 22:56:51,148 | INFO     | executing command: cat /etc/os-release
[2025-10-12 18:57:59] 2025-10-12 22:56:51,289 | INFO     | cat /etc/os-release:
[2025-10-12 18:57:59] NAME="CentOS Linux"
[2025-10-12 18:57:59] VERSION="7 (Core)"
[2025-10-12 18:57:59] ID="centos"
[2025-10-12 18:57:59] ID_LIKE="rhel fedora"
[2025-10-12 18:57:59] VERSION_ID="7"
[2025-10-12 18:57:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 18:57:59] ANSI_COLOR="0;31"
[2025-10-12 18:57:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 18:57:59] HOME_URL="https://www.centos.org/"
[2025-10-12 18:57:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 18:57:59] 
[2025-10-12 18:57:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 18:57:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 18:57:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 18:57:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 18:57:59] 
[2025-10-12 18:57:59] 2025-10-12 22:56:51,290 | INFO     | ***************************************
[2025-10-12 18:57:59] 2025-10-12 22:56:51,795 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 18:57:59] 2025-10-12 22:56:51,953 | INFO     | sufficient remaining disk space (75290902528 B)
[2025-10-12 18:57:59] 2025-10-12 22:56:51,954 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 18:57:59] 2025-10-12 22:56:51,954 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 18:57:59] 2025-10-12 22:56:51,954 | INFO     | update_server=False
[2025-10-12 18:57:59] 2025-10-12 22:56:51,954 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 18:57:59] 2025-10-12 22:56:51,955 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 18:57:59] 2025-10-12 22:56:51,976 | INFO     | all job control threads have been joined
[2025-10-12 18:57:59] 2025-10-12 22:56:51,982 | INFO     | all payload control threads have been joined
[2025-10-12 18:57:59] 2025-10-12 22:56:52,782 | INFO     | all data control threads have been joined
[2025-10-12 18:57:59] 2025-10-12 22:56:52,872 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:57:59] 2025-10-12 22:56:52,872 | INFO     | aborting loop
[2025-10-12 18:57:59] 2025-10-12 22:56:52,960 | INFO     | [job] retrieve thread has finished
[2025-10-12 18:57:59] 2025-10-12 22:56:52,982 | INFO     | [job] control thread has finished
[2025-10-12 18:57:59] 2025-10-12 22:56:52,988 | INFO     | [payload] control thread has finished
[2025-10-12 18:57:59] 2025-10-12 22:56:53,404 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 18:57:59] 2025-10-12 22:56:53,521 | INFO     | [payload] failed_post thread has finished
[2025-10-12 18:57:59] 2025-10-12 22:56:53,565 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 18:57:59] 2025-10-12 22:56:53,788 | INFO     | [data] control thread has finished
[2025-10-12 18:57:59] 2025-10-12 22:56:53,881 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 18:57:59] 2025-10-12 22:56:53,902 | INFO     | [job] job monitor thread has finished
[2025-10-12 18:57:59] 2025-10-12 22:56:53,908 | INFO     | [job] validate thread has finished
[2025-10-12 18:57:59] 2025-10-12 22:56:53,948 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 18:57:59] 2025-10-12 22:56:53,991 | INFO     | [data] copytool_out thread has finished
[2025-10-12 18:57:59] 2025-10-12 22:56:54,012 | INFO     | [data] copytool_in thread has finished
[2025-10-12 18:57:59] 2025-10-12 22:56:54,251 | INFO     | [payload] validate_post thread has finished
[2025-10-12 18:57:59] 2025-10-12 22:56:54,809 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:57:59] 2025-10-12 22:56:55,069 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 18:57:59] 2025-10-12 22:56:55,815 | INFO     | [job] queue monitor thread has finished
[2025-10-12 18:57:59] 2025-10-12 22:56:59,078 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 18:57:59] 2025-10-12 22:57:21,423 | INFO     | PID=875724 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 18:57:59] 2025-10-12 22:57:21,424 | INFO     | .. there are 23 such processes running
[2025-10-12 18:57:59] 2025-10-12 22:57:21,425 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 18:57:59] 2025-10-12 22:57:21,426 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 18:57:59] 2025-10-12 22:57:21,426 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 18:57:59] 2025-10-12 22:57:50,153 | INFO     | [monitor] cgroup control has ended
[2025-10-12 18:57:59] 2025-10-12 22:57:51,177 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140606180194112)>', '<ExcThread(monitor, started 140605518755584)>']
[2025-10-12 18:57:59] 2025-10-12 22:57:51,685 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 18:57:59] 2025-10-12 22:57:51,685 | INFO     | [monitor] control thread has ended
[2025-10-12 18:57:59] 2025-10-12 22:57:56,203 | INFO     | all workflow threads have been joined
[2025-10-12 18:57:59] 2025-10-12 22:57:56,203 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 18:57:59] 2025-10-12 22:57:56,204 | INFO     | traces error code: 0
[2025-10-12 18:57:59] 2025-10-12 22:57:56,204 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 18:57:59] 2025-10-12 22:57:57,502 [wrapper] ==== pilot stdout END ====
[2025-10-12 18:57:59] 2025-10-12 22:57:57,546 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 18:57:59] 2025-10-12 22:57:57,565 [wrapper] pilotpid: 875724
[2025-10-12 18:57:59] 2025-10-12 22:57:57,580 [wrapper] Pilot exit status: 0
[2025-10-12 18:57:59] 2025-10-12 22:57:57,675 [wrapper] pandaids: 6839868709
[2025-10-12 18:57:59] 2025-10-12 22:57:58,254 [wrapper] cleanup supervisor_pilot 2041813 875725
[2025-10-12 18:57:59] 2025-10-12 22:57:58,284 [wrapper] Test setup, not cleaning
[2025-10-12 18:57:59] 2025-10-12 22:57:58,380 [wrapper] apfmon messages muted
[2025-10-12 18:57:59] 2025-10-12 22:57:58,430 [wrapper] ==== wrapper stdout END ====
[2025-10-12 18:57:59] 2025-10-12 22:57:58,466 [wrapper] ==== wrapper stderr END ====
[2025-10-12 18:57:59]  *** Error codes and diagnostics ***
[2025-10-12 18:57:59]     "exeErrorCode": 0,
[2025-10-12 18:57:59]     "exeErrorDiag": "",
[2025-10-12 18:57:59]     "pilotErrorCode": 0,
[2025-10-12 18:57:59]     "pilotErrorDiag": "",
[2025-10-12 18:57:59]  *** Listing of results directory ***
[2025-10-12 18:57:59] total 415516
[2025-10-12 18:57:59] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 06:57 pilot3.tar.gz
[2025-10-12 18:57:59] -rwx------. 1 boincer umatlas     36292 Oct 12 07:06 runpilot2-wrapper.sh
[2025-10-12 18:57:59] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 07:06 queuedata.json
[2025-10-12 18:57:59] -rw-r--r--. 1 boincer umatlas       100 Oct 12 11:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 18:57:59] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 11:21 run_atlas
[2025-10-12 18:57:59] -rw-r--r--. 1 boincer umatlas       105 Oct 12 11:21 job.xml
[2025-10-12 18:57:59] -rw-r--r--. 2 boincer umatlas 222792071 Oct 12 11:21 EVNT.46676267._003656.pool.root.1
[2025-10-12 18:57:59] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 11:21 start_atlas.sh
[2025-10-12 18:57:59] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 11:21 shared
[2025-10-12 18:57:59] -rw-r--r--. 2 boincer umatlas    569675 Oct 12 11:21 input.tar.gz
[2025-10-12 18:57:59] -rw-r--r--. 1 boincer umatlas         0 Oct 12 11:21 boinc_lockfile
[2025-10-12 18:57:59] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 11:22 pandaJob.out
[2025-10-12 18:57:59] -rw-------. 1 boincer umatlas    975528 Oct 12 11:22 agis_schedconf.cvmfs.json
[2025-10-12 18:57:59] drwx------. 5 boincer umatlas      4096 Oct 12 11:22 pilot3
[2025-10-12 18:57:59] -rw-------. 1 boincer umatlas 191251589 Oct 12 18:53 HITS.46676269._076658.pool.root.1
[2025-10-12 18:57:59] -rw-r--r--. 1 boincer umatlas       531 Oct 12 18:54 boinc_task_state.xml
[2025-10-12 18:57:59] -rw-r--r--. 1 boincer umatlas      6843 Oct 12 18:55 init_data.xml
[2025-10-12 18:57:59] -rw-------. 1 boincer umatlas      1041 Oct 12 18:55 memory_monitor_summary.json
[2025-10-12 18:57:59] -rw-------. 1 boincer umatlas   1560580 Oct 12 18:55 agis_ddmendpoints.agis.ALL.json
[2025-10-12 18:57:59] -rw-------. 1 boincer umatlas    643157 Oct 12 18:55 log.46676269._076658.job.log.tgz.1
[2025-10-12 18:57:59] -rw-------. 1 boincer umatlas      7827 Oct 12 18:56 heartbeat.json
[2025-10-12 18:57:59] -rw-------. 1 boincer umatlas        95 Oct 12 18:57 pilot_heartbeat.json
[2025-10-12 18:57:59] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 18:57 boinc_mmap_file
[2025-10-12 18:57:59] -rw-r--r--. 1 boincer umatlas        28 Oct 12 18:57 wrapper_checkpoint.txt
[2025-10-12 18:57:59] -rw-------. 1 boincer umatlas      4823 Oct 12 18:57 pilotlog.txt
[2025-10-12 18:57:59] -rw-------. 1 boincer umatlas   3129204 Oct 12 18:57 log.46676269._076658.job.log.1
[2025-10-12 18:57:59] -rw-------. 1 boincer umatlas       357 Oct 12 18:57 output.list
[2025-10-12 18:57:59] -rw-r--r--. 1 boincer umatlas       620 Oct 12 18:57 runtime_log
[2025-10-12 18:57:59] -rw-------. 1 boincer umatlas   3788800 Oct 12 18:57 result.tar.gz
[2025-10-12 18:57:59] -rw-------. 1 boincer umatlas       657 Oct 12 18:57 XodNDmm58R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmbZjNDmTR3Ern.diag
[2025-10-12 18:57:59] -rw-r--r--. 1 boincer umatlas      8711 Oct 12 18:57 runtime_log.err
[2025-10-12 18:57:59] -rw-r--r--. 1 boincer umatlas     20784 Oct 12 18:57 stderr.txt
[2025-10-12 18:57:59] HITS file was successfully produced:
[2025-10-12 18:57:59] -rw-------. 1 boincer umatlas 191251589 Oct 12 18:53 shared/HITS.pool.root.1
[2025-10-12 18:57:59]  *** Contents of shared directory: ***
[2025-10-12 18:57:59] total 408624
[2025-10-12 18:57:59] -rw-r--r--. 2 boincer umatlas 222792071 Oct 12 11:21 ATLAS.root_0
[2025-10-12 18:57:59] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 11:21 start_atlas.sh
[2025-10-12 18:57:59] -rw-r--r--. 2 boincer umatlas    569675 Oct 12 11:21 input.tar.gz
[2025-10-12 18:57:59] -rw-------. 1 boincer umatlas 191251589 Oct 12 18:53 HITS.pool.root.1
[2025-10-12 18:57:59] -rw-------. 1 boincer umatlas   3788800 Oct 12 18:57 result.tar.gz
18:58:01 (861104): run_atlas exited; CPU time 47626.562509
18:58:01 (861104): called boinc_finish(0)

</stderr_txt>
]]>

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