Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:23:00 (1242222): wrapper (7.7.26015): starting
11:23:00 (1242222): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 11:23:00] Arguments: --nthreads 8
[2025-10-12 11:23:00] Threads: 8
[2025-10-12 11:23:00] Checking for CVMFS
[2025-10-12 11:23:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 11:23:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 11:23:01] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 11:23:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 11:23:01] 2.13.2.0 20986 300917 1140136 151625 0 201 29894366 32935937 61368 130560 0 479896663 99.774 283452708 20190 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 11:23:01] CVMFS is ok
[2025-10-12 11:23:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 11:23:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 11:23:01] Further information can be found at the LHC@home message board.
[2025-10-12 11:23:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 11:23:01] Checking for apptainer binary...
[2025-10-12 11:23:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 11:23:01] Running /usr/bin/apptainer --version
[2025-10-12 11:23:02] apptainer version 1.4.3-1.el9
[2025-10-12 11:23:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 11:23:02] lc-10-10.aglt2.org
[2025-10-12 11:23:02] apptainer works
[2025-10-12 11:23:02] Set ATHENA_PROC_NUMBER=8
[2025-10-12 11:23:02] Set ATHENA_CORE_NUMBER=8
[2025-10-12 11:23:02] Starting ATLAS job with PandaID=6839774592
[2025-10-12 11:23:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 16:17:46]  *** The last 200 lines of the pilot log: ***
[2025-10-12 16:17:46] 2025-10-12 20:16:35,548 | INFO     | sum of square deviations: 7253639442.353155
[2025-10-12 16:17:46] 2025-10-12 20:16:35,561 | INFO     | sum of deviations: 41463794463.192406
[2025-10-12 16:17:46] 2025-10-12 20:16:35,561 | INFO     | mean x: 1760291445.604895
[2025-10-12 16:17:46] 2025-10-12 20:16:35,561 | INFO     | mean y: 2096240.576923077
[2025-10-12 16:17:46] 2025-10-12 20:16:35,561 | INFO     | -- intersect: -10060212932.071867
[2025-10-12 16:17:46] 2025-10-12 20:16:35,562 | INFO     | intersect: -10060212932.071867
[2025-10-12 16:17:46] 2025-10-12 20:16:35,562 | INFO     | chi2: 3.9123883293171433
[2025-10-12 16:17:46] 2025-10-12 20:16:35,579 | INFO     | sum of square deviations: 6879809024.797138
[2025-10-12 16:17:46] 2025-10-12 20:16:35,581 | INFO     | sum of deviations: 77312691679.60143
[2025-10-12 16:17:46] 2025-10-12 20:16:35,581 | INFO     | mean x: 1760291293.1067615
[2025-10-12 16:17:46] 2025-10-12 20:16:35,582 | INFO     | mean y: 2110733.9466192173
[2025-10-12 16:17:46] 2025-10-12 20:16:35,582 | INFO     | -- intersect: -19779377025.33938
[2025-10-12 16:17:46] 2025-10-12 20:16:35,582 | INFO     | intersect: -19779377025.33938
[2025-10-12 16:17:46] 2025-10-12 20:16:35,582 | INFO     | chi2: 2.25660089508009
[2025-10-12 16:17:46] 2025-10-12 20:16:35,582 | INFO     | current chi2=2.25660089508009 (change=42.321653549305246 %)
[2025-10-12 16:17:46] 2025-10-12 20:16:35,603 | INFO     | sum of square deviations: 6519048619.739136
[2025-10-12 16:17:46] 2025-10-12 20:16:35,615 | INFO     | sum of deviations: 76979251125.82616
[2025-10-12 16:17:46] 2025-10-12 20:16:35,616 | INFO     | mean x: 1760291140.6086957
[2025-10-12 16:17:46] 2025-10-12 20:16:35,616 | INFO     | mean y: 2110583.6557971016
[2025-10-12 16:17:46] 2025-10-12 20:16:35,616 | INFO     | -- intersect: -20784035013.906277
[2025-10-12 16:17:46] 2025-10-12 20:16:35,616 | INFO     | intersect: -20784035013.906277
[2025-10-12 16:17:46] 2025-10-12 20:16:35,617 | INFO     | chi2: 2.250362831353965
[2025-10-12 16:17:46] 2025-10-12 20:16:35,617 | INFO     | current chi2=2.250362831353965 (change=0.2764362869714988 %)
[2025-10-12 16:17:46] 2025-10-12 20:16:35,617 | INFO     | right removable region: 275
[2025-10-12 16:17:46] 2025-10-12 20:16:35,617 | INFO     | sum of square deviations: 6879790724.797138
[2025-10-12 16:17:46] 2025-10-12 20:16:35,637 | INFO     | sum of deviations: -9993497016.832743
[2025-10-12 16:17:46] 2025-10-12 20:16:35,637 | INFO     | mean x: 1760291598.1067615
[2025-10-12 16:17:46] 2025-10-12 20:16:35,637 | INFO     | mean y: 2117153.227758007
[2025-10-12 16:17:46] 2025-10-12 20:16:35,637 | INFO     | -- intersect: 2559094471.01592
[2025-10-12 16:17:46] 2025-10-12 20:16:35,637 | INFO     | intersect: 2559094471.01592
[2025-10-12 16:17:46] 2025-10-12 20:16:35,638 | INFO     | chi2: 2.0380540521311294
[2025-10-12 16:17:46] 2025-10-12 20:16:35,638 | INFO     | current chi2=2.0380540521311294 (change=47.9076747862898 %)
[2025-10-12 16:17:46] 2025-10-12 20:16:35,638 | INFO     | sum of square deviations: 6519028915.952894
[2025-10-12 16:17:46] 2025-10-12 20:16:35,660 | INFO     | sum of deviations: -24172749336.713768
[2025-10-12 16:17:46] 2025-10-12 20:16:35,660 | INFO     | mean x: 1760291750.6050725
[2025-10-12 16:17:46] 2025-10-12 20:16:35,660 | INFO     | mean y: 2123129.938405797
[2025-10-12 16:17:46] 2025-10-12 20:16:35,660 | INFO     | -- intersect: 6529336277.088826
[2025-10-12 16:17:46] 2025-10-12 20:16:35,660 | INFO     | intersect: 6529336277.088826
[2025-10-12 16:17:46] 2025-10-12 20:16:35,661 | INFO     | chi2: 1.8993890260675803
[2025-10-12 16:17:46] 2025-10-12 20:16:35,661 | INFO     | current chi2=1.8993890260675803 (change=6.803795312423214 %)
[2025-10-12 16:17:46] 2025-10-12 20:16:35,661 | INFO     | left removable region: 20
[2025-10-12 16:17:46] 2025-10-12 20:16:35,661 | INFO     | sum of square deviations: 5141307436.1411495
[2025-10-12 16:17:46] 2025-10-12 20:16:35,680 | INFO     | sum of deviations: 1483141714.9647074
[2025-10-12 16:17:46] 2025-10-12 20:16:35,746 | INFO     | mean x: 1760291720.1058824
[2025-10-12 16:17:46] 2025-10-12 20:16:35,746 | INFO     | mean y: 2143811.556862745
[2025-10-12 16:17:46] 2025-10-12 20:16:35,746 | INFO     | -- intersect: -505657387.46179426
[2025-10-12 16:17:46] 2025-10-12 20:16:35,746 | INFO     | intersect: -505657387.46179426
[2025-10-12 16:17:46] 2025-10-12 20:16:35,747 | INFO     | chi2: 0.12406438574314285
[2025-10-12 16:17:46] 2025-10-12 20:16:35,747 | INFO     | -- intersect: -505657387.46179426
[2025-10-12 16:17:46] 2025-10-12 20:16:35,747 | INFO     | current memory leak: 0.29 B/s (using 255 data points, chi2=0.12)
[2025-10-12 16:17:46] 2025-10-12 20:16:35,748 | INFO     | could have reported an average CPU frequency of 2830 MHz (13 samples)
[2025-10-12 16:17:46] 2025-10-12 20:16:35,748 | INFO     | ..............................
[2025-10-12 16:17:46] 2025-10-12 20:16:35,748 | INFO     | . Timing measurements:
[2025-10-12 16:17:46] 2025-10-12 20:16:35,748 | INFO     | . get job = 0 s
[2025-10-12 16:17:46] 2025-10-12 20:16:35,748 | INFO     | . initial setup = 5 s
[2025-10-12 16:17:46] 2025-10-12 20:16:35,748 | INFO     | . payload setup = 26 s
[2025-10-12 16:17:46] 2025-10-12 20:16:35,748 | INFO     | . stage-in = 0 s
[2025-10-12 16:17:46] 2025-10-12 20:16:35,748 | INFO     | . payload execution = 17416 s
[2025-10-12 16:17:46] 2025-10-12 20:16:35,749 | INFO     | . stage-out = 7 s
[2025-10-12 16:17:46] 2025-10-12 20:16:35,749 | INFO     | . log creation = 0 s
[2025-10-12 16:17:46] 2025-10-12 20:16:35,749 | INFO     | ..............................
[2025-10-12 16:17:46] 2025-10-12 20:16:36,556 | INFO     | 
[2025-10-12 16:17:46] 2025-10-12 20:16:36,556 | INFO     | job summary report
[2025-10-12 16:17:46] 2025-10-12 20:16:36,556 | INFO     | --------------------------------------------------
[2025-10-12 16:17:46] 2025-10-12 20:16:36,556 | INFO     | PanDA job id: 6839774592
[2025-10-12 16:17:46] 2025-10-12 20:16:36,556 | INFO     | task id: 46676269
[2025-10-12 16:17:46] 2025-10-12 20:16:36,556 | INFO     | errors: (none)
[2025-10-12 16:17:46] 2025-10-12 20:16:36,556 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 16:17:46] 2025-10-12 20:16:36,556 | INFO     | pilot state: finished 
[2025-10-12 16:17:46] 2025-10-12 20:16:36,556 | INFO     | transexitcode: 0
[2025-10-12 16:17:46] 2025-10-12 20:16:36,556 | INFO     | exeerrorcode: 0
[2025-10-12 16:17:46] 2025-10-12 20:16:36,557 | INFO     | exeerrordiag: 
[2025-10-12 16:17:46] 2025-10-12 20:16:36,557 | INFO     | exitcode: 0
[2025-10-12 16:17:46] 2025-10-12 20:16:36,557 | INFO     | exitmsg: OK
[2025-10-12 16:17:46] 2025-10-12 20:16:36,557 | INFO     | cpuconsumptiontime: 44324 s
[2025-10-12 16:17:46] 2025-10-12 20:16:36,557 | INFO     | nevents: 400
[2025-10-12 16:17:46] 2025-10-12 20:16:36,557 | INFO     | neventsw: 0
[2025-10-12 16:17:46] 2025-10-12 20:16:36,557 | INFO     | pid: 1289893
[2025-10-12 16:17:46] 2025-10-12 20:16:36,557 | INFO     | pgrp: 1289893
[2025-10-12 16:17:46] 2025-10-12 20:16:36,557 | INFO     | corecount: 8
[2025-10-12 16:17:46] 2025-10-12 20:16:36,557 | INFO     | event service: False
[2025-10-12 16:17:46] 2025-10-12 20:16:36,571 | INFO     | sizes: {0: 2348629, 1: 2348713, 2: 2348912, 13: 2348912, 24: 2348968, 31: 2349258, 35: 2349414, 17447: 2381467, 17448: 2381466, 17455: 2390520, 17459: 2390576, 174
[2025-10-12 16:17:46] 2025-10-12 20:16:36,571 | INFO     | --------------------------------------------------
[2025-10-12 16:17:46] 2025-10-12 20:16:36,571 | INFO     | 
[2025-10-12 16:17:46] 2025-10-12 20:16:36,571 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-12 16:17:46] 2025-10-12 20:16:36,727 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 16:17:46] 2025-10-12 20:16:36,727 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 16:17:46] 2025-10-12 20:16:36,727 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 16:17:46] 2025-10-12 20:16:36,727 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 16:17:46] 2025-10-12 20:16:36,728 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 16:17:46] 2025-10-12 20:16:36,728 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 16:17:46] 2025-10-12 20:16:36,728 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 16:17:46] 2025-10-12 20:16:36,728 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 16:17:46] 2025-10-12 20:16:36,728 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 16:17:46] 2025-10-12 20:16:36,728 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 16:17:46] 2025-10-12 20:16:36,728 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 16:17:46] 2025-10-12 20:16:36,728 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 16:17:46] 2025-10-12 20:16:36,728 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 16:17:46] 2025-10-12 20:16:36,728 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 16:17:46] 2025-10-12 20:16:36,728 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 16:17:46] 2025-10-12 20:16:36,728 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 16:17:46] 2025-10-12 20:16:36,728 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 16:17:46] 2025-10-12 20:16:36,729 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 16:17:46] 2025-10-12 20:16:36,729 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 16:17:46] 2025-10-12 20:16:36,729 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 16:17:46] 2025-10-12 20:16:36,729 | INFO     | job 6839774592 has completed (purged errors)
[2025-10-12 16:17:46] 2025-10-12 20:16:36,729 | INFO     | overall cleanup function is called
[2025-10-12 16:17:46] 2025-10-12 20:16:37,742 | INFO     | --- collectZombieJob: --- 10, [1289893]
[2025-10-12 16:17:46] 2025-10-12 20:16:37,742 | INFO     | zombie collector waiting for pid 1289893
[2025-10-12 16:17:46] 2025-10-12 20:16:37,742 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 16:17:46] 2025-10-12 20:16:37,742 | INFO     | collected zombie processes
[2025-10-12 16:17:46] 2025-10-12 20:16:37,742 | INFO     | will attempt to kill all subprocesses of pid=1289893
[2025-10-12 16:17:46] 2025-10-12 20:16:38,683 | INFO     | PID=1258101 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 16:17:46] 2025-10-12 20:16:38,683 | INFO     | .. there are 75 such processes running
[2025-10-12 16:17:46] 2025-10-12 20:16:42,436 | INFO     | process IDs to be killed: [1289893] (in reverse order)
[2025-10-12 16:17:46] 2025-10-12 20:16:42,963 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 16:17:46] 2025-10-12 20:16:42,963 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 16:17:46] 2025-10-12 20:16:43,049 | INFO     | did not find any defunct processes belonging to 1289893
[2025-10-12 16:17:46] 2025-10-12 20:16:43,082 | INFO     | did not find any defunct processes belonging to 1289893
[2025-10-12 16:17:46] 2025-10-12 20:16:43,082 | INFO     | ready for new job
[2025-10-12 16:17:46] 2025-10-12 20:16:43,083 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 16:17:46] 2025-10-12 20:16:43,085 | INFO     | ***************************************
[2025-10-12 16:17:46] 2025-10-12 20:16:43,085 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 16:17:46] 2025-10-12 20:16:43,085 | INFO     | ***************************************
[2025-10-12 16:17:46] 2025-10-12 20:16:43,085 | INFO     | 
[2025-10-12 16:17:46] 2025-10-12 20:16:43,129 | INFO     | architecture information:
[2025-10-12 16:17:46] 2025-10-12 20:16:43,141 | INFO     | executing command: cat /etc/os-release
[2025-10-12 16:17:46] 2025-10-12 20:16:43,238 | INFO     | cat /etc/os-release:
[2025-10-12 16:17:46] NAME="CentOS Linux"
[2025-10-12 16:17:46] VERSION="7 (Core)"
[2025-10-12 16:17:46] ID="centos"
[2025-10-12 16:17:46] ID_LIKE="rhel fedora"
[2025-10-12 16:17:46] VERSION_ID="7"
[2025-10-12 16:17:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 16:17:46] ANSI_COLOR="0;31"
[2025-10-12 16:17:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 16:17:46] HOME_URL="https://www.centos.org/"
[2025-10-12 16:17:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 16:17:46] 
[2025-10-12 16:17:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 16:17:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 16:17:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 16:17:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 16:17:46] 
[2025-10-12 16:17:46] 2025-10-12 20:16:43,238 | INFO     | ***************************************
[2025-10-12 16:17:46] 2025-10-12 20:16:43,742 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-12 16:17:46] 2025-10-12 20:16:43,829 | INFO     | sufficient remaining disk space (94370791424 B)
[2025-10-12 16:17:46] 2025-10-12 20:16:43,829 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 16:17:46] 2025-10-12 20:16:43,829 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 16:17:46] 2025-10-12 20:16:43,830 | INFO     | update_server=False
[2025-10-12 16:17:46] 2025-10-12 20:16:43,830 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 16:17:46] 2025-10-12 20:16:43,830 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 16:17:46] 2025-10-12 20:16:44,193 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 16:17:46] 2025-10-12 20:16:44,193 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 16:17:46] 2025-10-12 20:16:44,193 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:17:46] 2025-10-12 20:16:44,193 | INFO     | will abort loop
[2025-10-12 16:17:46] 2025-10-12 20:16:44,520 | INFO     | all data control threads have been joined
[2025-10-12 16:17:46] 2025-10-12 20:16:44,830 | INFO     | all job control threads have been joined
[2025-10-12 16:17:46] 2025-10-12 20:16:44,836 | INFO     | [job] retrieve thread has finished
[2025-10-12 16:17:46] 2025-10-12 20:16:45,093 | INFO     | all payload control threads have been joined
[2025-10-12 16:17:46] 2025-10-12 20:16:45,199 | INFO     | [job] job monitor thread has finished
[2025-10-12 16:17:46] 2025-10-12 20:16:45,401 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:17:46] 2025-10-12 20:16:45,404 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 16:17:46] 2025-10-12 20:16:45,526 | INFO     | [data] control thread has finished
[2025-10-12 16:17:46] 2025-10-12 20:16:45,734 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 16:17:46] 2025-10-12 20:16:45,836 | INFO     | [job] control thread has finished
[2025-10-12 16:17:46] 2025-10-12 20:16:45,837 | INFO     | [data] copytool_out thread has finished
[2025-10-12 16:17:46] 2025-10-12 20:16:45,946 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 16:17:46] 2025-10-12 20:16:46,066 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 16:17:46] 2025-10-12 20:16:46,078 | INFO     | [payload] failed_post thread has finished
[2025-10-12 16:17:46] 2025-10-12 20:16:46,099 | INFO     | [payload] control thread has finished
[2025-10-12 16:17:46] 2025-10-12 20:16:46,153 | INFO     | [data] copytool_in thread has finished
[2025-10-12 16:17:46] 2025-10-12 20:16:46,153 | INFO     | [job] validate thread has finished
[2025-10-12 16:17:46] 2025-10-12 20:16:46,250 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 16:17:46] 2025-10-12 20:16:46,282 | INFO     | [payload] validate_post thread has finished
[2025-10-12 16:17:46] 2025-10-12 20:16:46,409 | INFO     | [job] queue monitor thread has finished
[2025-10-12 16:17:46] 2025-10-12 20:16:49,770 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 16:17:46] 2025-10-12 20:17:13,287 | INFO     | PID=1258101 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 16:17:46] 2025-10-12 20:17:13,287 | INFO     | .. there are 75 such processes running
[2025-10-12 16:17:46] 2025-10-12 20:17:13,303 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 16:17:46] 2025-10-12 20:17:13,303 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 16:17:46] 2025-10-12 20:17:13,303 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 16:17:46] 2025-10-12 20:17:39,558 | INFO     | [monitor] cgroup control has ended
[2025-10-12 16:17:46] 2025-10-12 20:17:39,813 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139649652389696)>', '<ExcThread(monitor, started 139649167120128)>']
[2025-10-12 16:17:46] 2025-10-12 20:17:40,541 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 16:17:46] 2025-10-12 20:17:40,542 | INFO     | [monitor] control thread has ended
[2025-10-12 16:17:46] 2025-10-12 20:17:44,839 | INFO     | all workflow threads have been joined
[2025-10-12 16:17:46] 2025-10-12 20:17:44,839 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 16:17:46] 2025-10-12 20:17:44,839 | INFO     | traces error code: 0
[2025-10-12 16:17:46] 2025-10-12 20:17:44,839 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 16:17:46] 2025-10-12 20:17:45,549 [wrapper] ==== pilot stdout END ====
[2025-10-12 16:17:46] 2025-10-12 20:17:45,568 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 16:17:46] 2025-10-12 20:17:45,585 [wrapper] pilotpid: 1258101
[2025-10-12 16:17:46] 2025-10-12 20:17:45,605 [wrapper] Pilot exit status: 0
[2025-10-12 16:17:46] 2025-10-12 20:17:45,678 [wrapper] pandaids: 6839774592
[2025-10-12 16:17:46] 2025-10-12 20:17:45,845 [wrapper] cleanup supervisor_pilot 2722278 1258102
[2025-10-12 16:17:46] 2025-10-12 20:17:45,855 [wrapper] Test setup, not cleaning
[2025-10-12 16:17:46] 2025-10-12 20:17:45,876 [wrapper] apfmon messages muted
[2025-10-12 16:17:46] 2025-10-12 20:17:45,891 [wrapper] ==== wrapper stdout END ====
[2025-10-12 16:17:46] 2025-10-12 20:17:45,905 [wrapper] ==== wrapper stderr END ====
[2025-10-12 16:17:46]  *** Error codes and diagnostics ***
[2025-10-12 16:17:46]     "exeErrorCode": 0,
[2025-10-12 16:17:46]     "exeErrorDiag": "",
[2025-10-12 16:17:46]     "pilotErrorCode": 0,
[2025-10-12 16:17:46]     "pilotErrorDiag": "",
[2025-10-12 16:17:46]  *** Listing of results directory ***
[2025-10-12 16:17:46] total 417316
[2025-10-12 16:17:46] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 04:37 pilot3.tar.gz
[2025-10-12 16:17:46] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 04:37 queuedata.json
[2025-10-12 16:17:46] -rwx------. 1 boincer umatlas     36292 Oct 12 04:38 runpilot2-wrapper.sh
[2025-10-12 16:17:46] -rw-r--r--. 1 boincer umatlas       100 Oct 12 11:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 16:17:46] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 11:22 run_atlas
[2025-10-12 16:17:46] -rw-r--r--. 1 boincer umatlas       105 Oct 12 11:22 job.xml
[2025-10-12 16:17:46] -rw-r--r--. 2 boincer umatlas 219851249 Oct 12 11:23 EVNT.46676267._003541.pool.root.1
[2025-10-12 16:17:46] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 11:23 start_atlas.sh
[2025-10-12 16:17:46] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 11:23 shared
[2025-10-12 16:17:46] -rw-r--r--. 2 boincer umatlas    569678 Oct 12 11:23 input.tar.gz
[2025-10-12 16:17:46] -rw-r--r--. 1 boincer umatlas         0 Oct 12 11:23 boinc_lockfile
[2025-10-12 16:17:46] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 11:23 pandaJob.out
[2025-10-12 16:17:46] -rw-------. 1 boincer umatlas    975528 Oct 12 11:24 agis_schedconf.cvmfs.json
[2025-10-12 16:17:46] drwx------. 5 boincer umatlas      4096 Oct 12 11:24 pilot3
[2025-10-12 16:17:46] -rw-r--r--. 1 boincer umatlas      6865 Oct 12 16:10 init_data.xml
[2025-10-12 16:17:46] -rw-------. 1 boincer umatlas 198555743 Oct 12 16:14 HITS.46676269._074484.pool.root.1
[2025-10-12 16:17:46] -rw-r--r--. 1 boincer umatlas       530 Oct 12 16:14 boinc_task_state.xml
[2025-10-12 16:17:46] -rw-------. 1 boincer umatlas      1046 Oct 12 16:15 memory_monitor_summary.json
[2025-10-12 16:17:46] -rw-------. 1 boincer umatlas   1560580 Oct 12 16:15 agis_ddmendpoints.agis.ALL.json
[2025-10-12 16:17:46] -rw-------. 1 boincer umatlas    487680 Oct 12 16:15 log.46676269._074484.job.log.tgz.1
[2025-10-12 16:17:46] -rw-------. 1 boincer umatlas      7829 Oct 12 16:16 heartbeat.json
[2025-10-12 16:17:46] -rw-------. 1 boincer umatlas        95 Oct 12 16:17 pilot_heartbeat.json
[2025-10-12 16:17:46] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 16:17 boinc_mmap_file
[2025-10-12 16:17:46] -rw-r--r--. 1 boincer umatlas        28 Oct 12 16:17 wrapper_checkpoint.txt
[2025-10-12 16:17:46] -rw-------. 1 boincer umatlas      5010 Oct 12 16:17 pilotlog.txt
[2025-10-12 16:17:46] -rw-------. 1 boincer umatlas   2021652 Oct 12 16:17 log.46676269._074484.job.log.1
[2025-10-12 16:17:46] -rw-------. 1 boincer umatlas       357 Oct 12 16:17 output.list
[2025-10-12 16:17:46] -rw-r--r--. 1 boincer umatlas       620 Oct 12 16:17 runtime_log
[2025-10-12 16:17:46] -rw-------. 1 boincer umatlas   2529280 Oct 12 16:17 result.tar.gz
[2025-10-12 16:17:46] -rw-------. 1 boincer umatlas       655 Oct 12 16:17 VR2MDmsl6R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzAjNDmC9sIem.diag
[2025-10-12 16:17:46] -rw-r--r--. 1 boincer umatlas      8704 Oct 12 16:17 runtime_log.err
[2025-10-12 16:17:46] -rw-r--r--. 1 boincer umatlas     21190 Oct 12 16:17 stderr.txt
[2025-10-12 16:17:46] HITS file was successfully produced:
[2025-10-12 16:17:46] -rw-------. 1 boincer umatlas 198555743 Oct 12 16:14 shared/HITS.pool.root.1
[2025-10-12 16:17:46]  *** Contents of shared directory: ***
[2025-10-12 16:17:46] total 411656
[2025-10-12 16:17:46] -rw-r--r--. 2 boincer umatlas 219851249 Oct 12 11:23 ATLAS.root_0
[2025-10-12 16:17:46] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 11:23 start_atlas.sh
[2025-10-12 16:17:46] -rw-r--r--. 2 boincer umatlas    569678 Oct 12 11:23 input.tar.gz
[2025-10-12 16:17:46] -rw-------. 1 boincer umatlas 198555743 Oct 12 16:14 HITS.pool.root.1
[2025-10-12 16:17:46] -rw-------. 1 boincer umatlas   2529280 Oct 12 16:17 result.tar.gz
16:17:48 (1242222): run_atlas exited; CPU time 45381.470930
16:17:48 (1242222): called boinc_finish(0)

</stderr_txt>
]]>

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