Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:03:13 (2118985): wrapper (7.7.26015): starting
03:03:13 (2118985): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 03:03:13] Arguments: --nthreads 3
[2025-10-13 03:03:13] Threads: 3
[2025-10-13 03:03:13] Checking for CVMFS
[2025-10-13 03:03:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 03:03:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 03:03:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 03:03:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 03:03:14] 2.9.2.0 570712 5032 84184 151642 0 57 30690006 36864001 0 130560 0 4074696 99.991 173276 836 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 03:03:14] CVMFS is ok
[2025-10-13 03:03:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 03:03:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 03:03:14] Further information can be found at the LHC@home message board.
[2025-10-13 03:03:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 03:03:14] Checking for apptainer binary...
[2025-10-13 03:03:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 03:03:14] Running /usr/bin/apptainer --version
[2025-10-13 03:03:14] apptainer version 1.4.1-1.1
[2025-10-13 03:03:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 03:03:14] magicA161a
[2025-10-13 03:03:14] apptainer works
[2025-10-13 03:03:14] Set ATHENA_PROC_NUMBER=3
[2025-10-13 03:03:14] Set ATHENA_CORE_NUMBER=3
[2025-10-13 03:03:14] Starting ATLAS job with PandaID=6839927860
[2025-10-13 03:03:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 04:21:39]  *** The last 200 lines of the pilot log: ***
[2025-10-13 04:21:39] VERSION="7 (Core)"
[2025-10-13 04:21:39] ID="centos"
[2025-10-13 04:21:39] ID_LIKE="rhel fedora"
[2025-10-13 04:21:39] VERSION_ID="7"
[2025-10-13 04:21:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 04:21:39] ANSI_COLOR="0;31"
[2025-10-13 04:21:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 04:21:39] HOME_URL="https://www.centos.org/"
[2025-10-13 04:21:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 04:21:39] 
[2025-10-13 04:21:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 04:21:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 04:21:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 04:21:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 04:21:39] 
[2025-10-13 04:21:39] 2025-10-13 02:21:09,321 | INFO     | ***************************************
[2025-10-13 04:21:39] 2025-10-13 02:21:09,824 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 04:21:39] 2025-10-13 02:21:09,836 | INFO     | sufficient remaining disk space (373957853184 B)
[2025-10-13 04:21:39] 2025-10-13 02:21:09,836 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 04:21:39] 2025-10-13 02:21:09,837 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 04:21:39] 2025-10-13 02:21:09,837 | INFO     | update_server=False
[2025-10-13 04:21:39] 2025-10-13 02:21:09,837 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 04:21:39] 2025-10-13 02:21:09,837 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:21:39] 2025-10-13 02:21:09,837 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:21:39] 2025-10-13 02:21:09,837 | INFO     | aborting loop
[2025-10-13 04:21:39] 2025-10-13 02:21:09,890 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 04:21:39] 2025-10-13 02:21:10,257 | INFO     | all job control threads have been joined
[2025-10-13 04:21:39] 2025-10-13 02:21:10,431 | INFO     | all data control threads have been joined
[2025-10-13 04:21:39] 2025-10-13 02:21:10,842 | INFO     | [job] retrieve thread has finished
[2025-10-13 04:21:39] 2025-10-13 02:21:10,843 | INFO     | [job] job monitor thread has finished
[2025-10-13 04:21:39] 2025-10-13 02:21:10,843 | INFO     | [job] queue monitor thread has finished
[2025-10-13 04:21:39] 2025-10-13 02:21:10,871 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 04:21:39] 2025-10-13 02:21:10,924 | INFO     | all payload control threads have been joined
[2025-10-13 04:21:39] 2025-10-13 02:21:11,263 | INFO     | [job] control thread has finished
[2025-10-13 04:21:39] 2025-10-13 02:21:11,437 | INFO     | [data] control thread has finished
[2025-10-13 04:21:39] 2025-10-13 02:21:11,494 | INFO     | [payload] failed_post thread has finished
[2025-10-13 04:21:39] 2025-10-13 02:21:11,581 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 04:21:39] 2025-10-13 02:21:11,666 | INFO     | [data] copytool_in thread has finished
[2025-10-13 04:21:39] 2025-10-13 02:21:11,896 | INFO     | [data] copytool_out thread has finished
[2025-10-13 04:21:39] 2025-10-13 02:21:11,929 | INFO     | [payload] control thread has finished
[2025-10-13 04:21:39] 2025-10-13 02:21:12,222 | INFO     | [payload] validate_post thread has finished
[2025-10-13 04:21:39] 2025-10-13 02:21:12,232 | INFO     | [job] validate thread has finished
[2025-10-13 04:21:39] 2025-10-13 02:21:12,294 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 04:21:39] 2025-10-13 02:21:12,614 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 04:21:39] 2025-10-13 02:21:16,617 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 04:21:39] 2025-10-13 02:21:20,111 | INFO     | job.realtimelogging is not enabled
[2025-10-13 04:21:39] 2025-10-13 02:21:21,117 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 04:21:39] 2025-10-13 02:21:24,454 | INFO     | [monitor] cgroup control has ended
[2025-10-13 04:21:39] 2025-10-13 02:21:25,460 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140064800732992)>', '<ExcThread(monitor, started 140064176727808)>']
[2025-10-13 04:21:39] 2025-10-13 02:21:30,468 | INFO     | all workflow threads have been joined
[2025-10-13 04:21:39] 2025-10-13 02:21:30,468 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 04:21:39] 2025-10-13 02:21:30,468 | INFO     | traces error code: 0
[2025-10-13 04:21:39] 2025-10-13 02:21:30,468 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 04:21:39] 2025-10-13 02:21:39,722 | INFO     | PID=2122702 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 04:21:39] 2025-10-13 02:21:39,723 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 04:21:39] 2025-10-13 02:21:39,723 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 04:21:39] 2025-10-13 02:21:39,723 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 04:21:39] 2025-10-13 02:21:39,723 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 04:21:39] 2025-10-13 02:21:39,723 | CRITICAL | thread 'MainThread' is not alive
[2025-10-13 04:21:39] 2025-10-13 02:21:39,723 | INFO     | [monitor] control thread has ended
[2025-10-13 04:21:39] 2025-10-13 02:21:39,768 [wrapper] ==== pilot stdout END ====
[2025-10-13 04:21:39] 2025-10-13 02:21:39,770 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 04:21:39] 2025-10-13 02:21:39,773 [wrapper] pilotpid: 2122702
[2025-10-13 04:21:39] 2025-10-13 02:21:39,775 [wrapper] Pilot exit status: 0
[2025-10-13 04:21:39] 2025-10-13 02:21:39,782 [wrapper] pandaids: 6839927860
[2025-10-13 04:21:39] 2025-10-13 02:21:39,797 [wrapper] cleanup supervisor_pilot 2141278 2122703
[2025-10-13 04:21:39] 2025-10-13 02:21:39,800 [wrapper] Test setup, not cleaning
[2025-10-13 04:21:39] 2025-10-13 02:21:39,802 [wrapper] apfmon messages muted
[2025-10-13 04:21:39] 2025-10-13 02:21:39,804 [wrapper] ==== wrapper stdout END ====
[2025-10-13 04:21:39] 2025-10-13 02:21:39,807 [wrapper] ==== wrapper stderr END ====
[2025-10-13 04:21:39]  *** Error codes and diagnostics ***
[2025-10-13 04:21:39]     "exeErrorCode": 0,
[2025-10-13 04:21:39]     "exeErrorDiag": "",
[2025-10-13 04:21:39]     "pilotErrorCode": 0,
[2025-10-13 04:21:39]     "pilotErrorDiag": "",
[2025-10-13 04:21:39]  *** Listing of results directory ***
[2025-10-13 04:21:39] total 413928
[2025-10-13 04:21:39] -rw-r--r-- 1 boinc boinc    557409 Oct 12 13:23 pilot3.tar.gz
[2025-10-13 04:21:39] -rw-r--r-- 1 boinc boinc      5112 Oct 12 13:50 queuedata.json
[2025-10-13 04:21:39] -rwx------ 1 boinc boinc     36292 Oct 12 13:51 runpilot2-wrapper.sh
[2025-10-13 04:21:39] -rw-r--r-- 1 boinc boinc       100 Oct 13 03:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 04:21:39] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 03:03 run_atlas
[2025-10-13 04:21:39] -rw-r--r-- 1 boinc boinc       105 Oct 13 03:03 job.xml
[2025-10-13 04:21:39] -rw-r--r-- 2 boinc boinc 222982699 Oct 13 03:03 EVNT.46676267._001712.pool.root.1
[2025-10-13 04:21:39] -rw-r--r-- 2 boinc boinc    569688 Oct 13 03:03 input.tar.gz
[2025-10-13 04:21:39] -rw-r--r-- 2 boinc boinc     15120 Oct 13 03:03 start_atlas.sh
[2025-10-13 04:21:39] drwxrwx--x 2 boinc boinc      4096 Oct 13 03:03 shared
[2025-10-13 04:21:39] -rw-r--r-- 1 boinc boinc         0 Oct 13 03:03 boinc_setup_complete
[2025-10-13 04:21:39] -rw-r--r-- 1 boinc boinc      6448 Oct 13 03:03 init_data.xml
[2025-10-13 04:21:39] -rw-r--r-- 1 boinc boinc         0 Oct 13 03:03 boinc_lockfile
[2025-10-13 04:21:39] -rw-r--r-- 1 boinc boinc      2550 Oct 13 03:03 pandaJob.out
[2025-10-13 04:21:39] -rw------- 1 boinc boinc    975603 Oct 13 03:03 agis_schedconf.cvmfs.json
[2025-10-13 04:21:39] -rw------- 1 boinc boinc   1560580 Oct 13 03:03 agis_ddmendpoints.agis.ALL.json
[2025-10-13 04:21:39] drwx------ 5 boinc boinc      4096 Oct 13 03:03 pilot3
[2025-10-13 04:21:39] -rw------- 1 boinc boinc        95 Oct 13 04:20 pilot_heartbeat.json
[2025-10-13 04:21:39] -rw------- 1 boinc boinc 195078768 Oct 13 04:20 HITS.46676269._077399.pool.root.1
[2025-10-13 04:21:39] -rw-r--r-- 1 boinc boinc       529 Oct 13 04:20 boinc_task_state.xml
[2025-10-13 04:21:39] -rw------- 1 boinc boinc      1017 Oct 13 04:20 memory_monitor_summary.json
[2025-10-13 04:21:39] -rw------- 1 boinc boinc    265728 Oct 13 04:21 log.46676269._077399.job.log.tgz.1
[2025-10-13 04:21:39] -rw------- 1 boinc boinc      7758 Oct 13 04:21 heartbeat.json
[2025-10-13 04:21:39] -rw-r--r-- 1 boinc boinc      8192 Oct 13 04:21 boinc_mmap_file
[2025-10-13 04:21:39] -rw-r--r-- 1 boinc boinc        27 Oct 13 04:21 wrapper_checkpoint.txt
[2025-10-13 04:21:39] -rw------- 1 boinc boinc       817 Oct 13 04:21 pilotlog.txt
[2025-10-13 04:21:39] -rw------- 1 boinc boinc    689686 Oct 13 04:21 log.46676269._077399.job.log.1
[2025-10-13 04:21:39] -rw------- 1 boinc boinc       357 Oct 13 04:21 output.list
[2025-10-13 04:21:39] -rw-r--r-- 1 boinc boinc       620 Oct 13 04:21 runtime_log
[2025-10-13 04:21:39] -rw------- 1 boinc boinc    972800 Oct 13 04:21 result.tar.gz
[2025-10-13 04:21:39] -rw-r--r-- 1 boinc boinc      8797 Oct 13 04:21 runtime_log.err
[2025-10-13 04:21:39] -rw------- 1 boinc boinc       662 Oct 13 04:21 NsKLDm0m9R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCgjNDmMYrHBo.diag
[2025-10-13 04:21:39] -rw-r--r-- 1 boinc boinc      8853 Oct 13 04:21 stderr.txt
[2025-10-13 04:21:39] HITS file was successfully produced:
[2025-10-13 04:21:39] -rw------- 1 boinc boinc 195078768 Oct 13 04:20 shared/HITS.pool.root.1
[2025-10-13 04:21:39]  *** Contents of shared directory: ***
[2025-10-13 04:21:39] total 409804
[2025-10-13 04:21:39] -rw-r--r-- 2 boinc boinc 222982699 Oct 13 03:03 ATLAS.root_0
[2025-10-13 04:21:39] -rw-r--r-- 2 boinc boinc    569688 Oct 13 03:03 input.tar.gz
[2025-10-13 04:21:39] -rw-r--r-- 2 boinc boinc     15120 Oct 13 03:03 start_atlas.sh
[2025-10-13 04:21:39] -rw------- 1 boinc boinc 195078768 Oct 13 04:20 HITS.pool.root.1
[2025-10-13 04:21:39] -rw------- 1 boinc boinc    972800 Oct 13 04:21 result.tar.gz
04:21:41 (2118985): run_atlas exited; CPU time 13349.315498
04:21:41 (2118985): called boinc_finish(0)

</stderr_txt>
]]>

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