Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
11:01:41 (1851206): wrapper (7.7.26015): starting
11:01:41 (1851206): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 11:01:41] Arguments: --nthreads 8
[2025-10-12 11:01:41] Threads: 8
[2025-10-12 11:01:41] Checking for CVMFS
[2025-10-12 11:01:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 11:01:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 11:01:41] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 11:01:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 11:01:41] 2.12.7.0 3856927 5650 72720 151627 1 57 2458110 4096001 923 130560 0 17479010 99.997 194245 597 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 11:01:41] CVMFS is ok
[2025-10-12 11:01:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 11:01:41] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 11:01:41] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 11:01:41] Further information can be found at the LHC@home message board.
[2025-10-12 11:01:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 11:01:41] Checking for apptainer binary...
[2025-10-12 11:01:41] apptainer is not installed, using version from CVMFS
[2025-10-12 11:01:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 11:01:41] painter
[2025-10-12 11:01:41] apptainer works
[2025-10-12 11:01:41] Set ATHENA_PROC_NUMBER=8
[2025-10-12 11:01:41] Set ATHENA_CORE_NUMBER=8
[2025-10-12 11:01:41] Starting ATLAS job with PandaID=6839927828
[2025-10-12 11:01:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 11:40:02]  *** The last 200 lines of the pilot log: ***
[2025-10-12 11:40:02]  replicas=None
[2025-10-12 11:40:02]  scope=mc23_13p6TeV
[2025-10-12 11:40:02]  status=None
[2025-10-12 11:40:02]  status_code=0
[2025-10-12 11:40:02]  storage_token=
[2025-10-12 11:40:02]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-6839927828/log.46676269._077367.job.log.tgz.1
[2025-10-12 11:40:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8a/d4/log.46676269._077367.job.log.tgz.1
[2025-10-12 11:40:02]  workdir=None
[2025-10-12 11:40:02] ]
[2025-10-12 11:40:02] 2025-10-12 17:39:23,830 | INFO     | transferring file log.46676269._077367.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-6839927828/log.46676269._077367.job.log.tgz.1 to /var/lib/boinc
[2025-10-12 11:40:02] 2025-10-12 17:39:23,830 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-6839927828/log.46676269._077367.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.466762
[2025-10-12 11:40:02] 2025-10-12 17:39:23,855 | INFO     | adding to output.list: log.46676269._077367.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8a/d4/log.46676269._077367.job.log.tg
[2025-10-12 11:40:02] 2025-10-12 17:39:23,856 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 11:40:02] 2025-10-12 17:39:23,856 | INFO     | summary of transferred files:
[2025-10-12 11:40:02] 2025-10-12 17:39:23,856 | INFO     |  -- lfn=log.46676269._077367.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 11:40:02] 2025-10-12 17:39:23,856 | INFO     | stage-out finished correctly
[2025-10-12 11:40:02] 2025-10-12 17:39:23,895 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 11:40:02] 2025-10-12 17:39:23,932 | INFO     | job 6839927828 has state=finished
[2025-10-12 11:40:02] 2025-10-12 17:39:23,932 | INFO     | preparing for final server update for job 6839927828 in state='finished'
[2025-10-12 11:40:02] 2025-10-12 17:39:23,932 | INFO     | this job has now completed (state=finished)
[2025-10-12 11:40:02] 2025-10-12 17:39:23,932 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 11:40:02] 2025-10-12 17:39:23,932 | INFO     | log transfer has been attempted: DONE
[2025-10-12 11:40:02] 2025-10-12 17:39:23,932 | INFO     | job 6839927828 has finished - writing final server update
[2025-10-12 11:40:02] 2025-10-12 17:39:23,932 | INFO     | total number of processed events: 400 (read)
[2025-10-12 11:40:02] 2025-10-12 17:39:23,933 | INFO     | executing command: lscpu
[2025-10-12 11:40:02] 2025-10-12 17:39:23,961 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 11:40:02] 2025-10-12 17:39:24,920 | INFO     | monitor loop #175: job 0:6839927828 is in state 'finished'
[2025-10-12 11:40:02] 2025-10-12 17:39:24,920 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 11:40:02] 2025-10-12 17:39:25,204 | INFO     | time since job start (2255s) is within the limit (172800.0s)
[2025-10-12 11:40:02] 2025-10-12 17:39:27,209 | INFO     | time since job start (2257s) is within the limit (172800.0s)
[2025-10-12 11:40:02] 2025-10-12 17:39:27,423 | INFO     | monitor loop #176: job 0:6839927828 is in state 'finished'
[2025-10-12 11:40:02] 2025-10-12 17:39:27,423 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 11:40:02] 2025-10-12 17:39:28,278 | INFO     | PID=1855052 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 11:40:02] 2025-10-12 17:39:28,279 | INFO     | .. there are 2 such processes running
[2025-10-12 11:40:02] 2025-10-12 17:39:29,279 | INFO     | time since job start (2259s) is within the limit (172800.0s)
[2025-10-12 11:40:02] 2025-10-12 17:39:29,423 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 11:40:02] 2025-10-12 17:39:29,425 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4532.077125
[2025-10-12 11:40:02] 2025-10-12 17:39:29,428 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6839927828/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 11:40:02] 2025-10-12 17:39:29,428 | INFO     | extracted standard info from prmon json
[2025-10-12 11:40:02] 2025-10-12 17:39:29,428 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 11:40:02] 2025-10-12 17:39:29,428 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 11:40:02] 2025-10-12 17:39:29,429 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 11:40:02] 2025-10-12 17:39:29,429 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 11:40:02] 2025-10-12 17:39:29,429 | INFO     | fitting pss+swap vs Time
[2025-10-12 11:40:02] 2025-10-12 17:39:29,429 | INFO     | sum of square deviations: 8362947.5
[2025-10-12 11:40:02] 2025-10-12 17:39:29,429 | INFO     | sum of deviations: -1054831062.5000001
[2025-10-12 11:40:02] 2025-10-12 17:39:29,429 | INFO     | mean x: 1760289718.5
[2025-10-12 11:40:02] 2025-10-12 17:39:29,429 | INFO     | mean y: 2575472.7
[2025-10-12 11:40:02] 2025-10-12 17:39:29,429 | INFO     | -- intersect: 222030547557.08545
[2025-10-12 11:40:02] 2025-10-12 17:39:29,429 | INFO     | intersect: 222030547557.08545
[2025-10-12 11:40:02] 2025-10-12 17:39:29,429 | INFO     | chi2: 0.015873358012238332
[2025-10-12 11:40:02] 2025-10-12 17:39:29,430 | INFO     | -- intersect: 222030547557.08545
[2025-10-12 11:40:02] 2025-10-12 17:39:29,430 | INFO     | current memory leak: -126.13 B/s (using 30 data points, chi2=0.02)
[2025-10-12 11:40:02] 2025-10-12 17:39:29,430 | INFO     | could have reported an average CPU frequency of 4388 MHz (5 samples)
[2025-10-12 11:40:02] 2025-10-12 17:39:29,430 | INFO     | ..............................
[2025-10-12 11:40:02] 2025-10-12 17:39:29,430 | INFO     | . Timing measurements:
[2025-10-12 11:40:02] 2025-10-12 17:39:29,430 | INFO     | . get job = 0 s
[2025-10-12 11:40:02] 2025-10-12 17:39:29,430 | INFO     | . initial setup = 3 s
[2025-10-12 11:40:02] 2025-10-12 17:39:29,430 | INFO     | . payload setup = 3 s
[2025-10-12 11:40:02] 2025-10-12 17:39:29,430 | INFO     | . stage-in = 0 s
[2025-10-12 11:40:02] 2025-10-12 17:39:29,430 | INFO     | . payload execution = 2233 s
[2025-10-12 11:40:02] 2025-10-12 17:39:29,430 | INFO     | . stage-out = 0 s
[2025-10-12 11:40:02] 2025-10-12 17:39:29,430 | INFO     | . log creation = 0 s
[2025-10-12 11:40:02] 2025-10-12 17:39:29,430 | INFO     | ..............................
[2025-10-12 11:40:02] 2025-10-12 17:39:29,713 | INFO     | 
[2025-10-12 11:40:02] 2025-10-12 17:39:29,713 | INFO     | job summary report
[2025-10-12 11:40:02] 2025-10-12 17:39:29,713 | INFO     | --------------------------------------------------
[2025-10-12 11:40:02] 2025-10-12 17:39:29,713 | INFO     | PanDA job id: 6839927828
[2025-10-12 11:40:02] 2025-10-12 17:39:29,713 | INFO     | task id: 46676269
[2025-10-12 11:40:02] 2025-10-12 17:39:29,713 | INFO     | errors: (none)
[2025-10-12 11:40:02] 2025-10-12 17:39:29,713 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 11:40:02] 2025-10-12 17:39:29,713 | INFO     | pilot state: finished 
[2025-10-12 11:40:02] 2025-10-12 17:39:29,713 | INFO     | transexitcode: 0
[2025-10-12 11:40:02] 2025-10-12 17:39:29,713 | INFO     | exeerrorcode: 0
[2025-10-12 11:40:02] 2025-10-12 17:39:29,713 | INFO     | exeerrordiag: 
[2025-10-12 11:40:02] 2025-10-12 17:39:29,713 | INFO     | exitcode: 0
[2025-10-12 11:40:02] 2025-10-12 17:39:29,713 | INFO     | exitmsg: OK
[2025-10-12 11:40:02] 2025-10-12 17:39:29,713 | INFO     | cpuconsumptiontime: 16573 s
[2025-10-12 11:40:02] 2025-10-12 17:39:29,713 | INFO     | nevents: 400
[2025-10-12 11:40:02] 2025-10-12 17:39:29,713 | INFO     | neventsw: 0
[2025-10-12 11:40:02] 2025-10-12 17:39:29,713 | INFO     | pid: 1861733
[2025-10-12 11:40:02] 2025-10-12 17:39:29,713 | INFO     | pgrp: 1861733
[2025-10-12 11:40:02] 2025-10-12 17:39:29,713 | INFO     | corecount: 8
[2025-10-12 11:40:02] 2025-10-12 17:39:29,713 | INFO     | event service: False
[2025-10-12 11:40:02] 2025-10-12 17:39:29,713 | INFO     | sizes: {0: 2348814, 2: 2349076, 11: 2349104, 2239: 2374243, 2241: 2383311, 2246: 2383481}
[2025-10-12 11:40:02] 2025-10-12 17:39:29,713 | INFO     | --------------------------------------------------
[2025-10-12 11:40:02] 2025-10-12 17:39:29,713 | INFO     | 
[2025-10-12 11:40:02] 2025-10-12 17:39:29,713 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-10-12 11:40:02] 2025-10-12 17:39:29,733 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 11:40:02] 2025-10-12 17:39:29,733 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 11:40:02] 2025-10-12 17:39:29,733 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 11:40:02] 2025-10-12 17:39:29,733 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 11:40:02] 2025-10-12 17:39:29,733 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 11:40:02] 2025-10-12 17:39:29,733 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 11:40:02] 2025-10-12 17:39:29,733 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 11:40:02] 2025-10-12 17:39:29,733 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 11:40:02] 2025-10-12 17:39:29,733 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 11:40:02] 2025-10-12 17:39:29,733 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 11:40:02] 2025-10-12 17:39:29,733 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 11:40:02] 2025-10-12 17:39:29,733 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 11:40:02] 2025-10-12 17:39:29,733 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 11:40:02] 2025-10-12 17:39:29,733 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 11:40:02] 2025-10-12 17:39:29,733 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 11:40:02] 2025-10-12 17:39:29,733 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 11:40:02] 2025-10-12 17:39:29,733 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 11:40:02] 2025-10-12 17:39:29,733 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 11:40:02] 2025-10-12 17:39:29,733 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 11:40:02] 2025-10-12 17:39:29,733 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 11:40:02] 2025-10-12 17:39:29,733 | INFO     | job 6839927828 has completed (purged errors)
[2025-10-12 11:40:02] 2025-10-12 17:39:29,733 | INFO     | overall cleanup function is called
[2025-10-12 11:40:02] 2025-10-12 17:39:30,740 | INFO     | --- collectZombieJob: --- 10, [1861733]
[2025-10-12 11:40:02] 2025-10-12 17:39:30,740 | INFO     | zombie collector waiting for pid 1861733
[2025-10-12 11:40:02] 2025-10-12 17:39:30,740 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 11:40:02] 2025-10-12 17:39:30,740 | INFO     | collected zombie processes
[2025-10-12 11:40:02] 2025-10-12 17:39:30,740 | INFO     | will attempt to kill all subprocesses of pid=1861733
[2025-10-12 11:40:02] 2025-10-12 17:39:30,798 | INFO     | process IDs to be killed: [1861733] (in reverse order)
[2025-10-12 11:40:02] 2025-10-12 17:39:30,874 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 11:40:02] 2025-10-12 17:39:30,875 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 11:40:02] 2025-10-12 17:39:30,879 | INFO     | did not find any defunct processes belonging to 1861733
[2025-10-12 11:40:02] 2025-10-12 17:39:30,881 | INFO     | did not find any defunct processes belonging to 1861733
[2025-10-12 11:40:02] 2025-10-12 17:39:30,881 | INFO     | ready for new job
[2025-10-12 11:40:02] 2025-10-12 17:39:30,882 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 11:40:02] 2025-10-12 17:39:30,882 | INFO     | ***************************************
[2025-10-12 11:40:02] 2025-10-12 17:39:30,882 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 11:40:02] 2025-10-12 17:39:30,882 | INFO     | ***************************************
[2025-10-12 11:40:02] 2025-10-12 17:39:30,882 | INFO     | 
[2025-10-12 11:40:02] 2025-10-12 17:39:30,883 | INFO     | architecture information:
[2025-10-12 11:40:02] 2025-10-12 17:39:30,885 | INFO     | executing command: cat /etc/os-release
[2025-10-12 11:40:02] 2025-10-12 17:39:30,900 | INFO     | cat /etc/os-release:
[2025-10-12 11:40:02] NAME="CentOS Linux"
[2025-10-12 11:40:02] VERSION="7 (Core)"
[2025-10-12 11:40:02] ID="centos"
[2025-10-12 11:40:02] ID_LIKE="rhel fedora"
[2025-10-12 11:40:02] VERSION_ID="7"
[2025-10-12 11:40:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 11:40:02] ANSI_COLOR="0;31"
[2025-10-12 11:40:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 11:40:02] HOME_URL="https://www.centos.org/"
[2025-10-12 11:40:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 11:40:02] 
[2025-10-12 11:40:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 11:40:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 11:40:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 11:40:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 11:40:02] 
[2025-10-12 11:40:02] 2025-10-12 17:39:30,901 | INFO     | ***************************************
[2025-10-12 11:40:02] 2025-10-12 17:39:31,403 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-10-12 11:40:02] 2025-10-12 17:39:31,421 | INFO     | sufficient remaining disk space (190781063168 B)
[2025-10-12 11:40:02] 2025-10-12 17:39:31,421 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 11:40:02] 2025-10-12 17:39:31,422 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 11:40:02] 2025-10-12 17:39:31,422 | INFO     | update_server=False
[2025-10-12 11:40:02] 2025-10-12 17:39:31,422 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 11:40:02] 2025-10-12 17:39:31,422 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:40:02] 2025-10-12 17:39:31,422 | INFO     | aborting loop
[2025-10-12 11:40:02] 2025-10-12 17:39:31,422 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:40:02] 2025-10-12 17:39:31,454 | INFO     | all job control threads have been joined
[2025-10-12 11:40:02] 2025-10-12 17:39:31,481 | INFO     | all payload control threads have been joined
[2025-10-12 11:40:02] 2025-10-12 17:39:31,778 | INFO     | all data control threads have been joined
[2025-10-12 11:40:02] 2025-10-12 17:39:31,905 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 11:40:02] 2025-10-12 17:39:32,427 | INFO     | [job] retrieve thread has finished
[2025-10-12 11:40:02] 2025-10-12 17:39:32,427 | INFO     | [job] job monitor thread has finished
[2025-10-12 11:40:02] 2025-10-12 17:39:32,427 | INFO     | [job] queue monitor thread has finished
[2025-10-12 11:40:02] 2025-10-12 17:39:32,459 | INFO     | [job] control thread has finished
[2025-10-12 11:40:02] 2025-10-12 17:39:32,486 | INFO     | [payload] control thread has finished
[2025-10-12 11:40:02] 2025-10-12 17:39:32,528 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 11:40:02] 2025-10-12 17:39:32,776 | INFO     | [payload] failed_post thread has finished
[2025-10-12 11:40:02] 2025-10-12 17:39:32,783 | INFO     | [data] control thread has finished
[2025-10-12 11:40:02] 2025-10-12 17:39:33,171 | INFO     | [data] copytool_in thread has finished
[2025-10-12 11:40:02] 2025-10-12 17:39:33,281 | INFO     | [payload] validate_post thread has finished
[2025-10-12 11:40:02] 2025-10-12 17:39:33,717 | INFO     | [job] validate thread has finished
[2025-10-12 11:40:02] 2025-10-12 17:39:33,793 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 11:40:02] 2025-10-12 17:39:33,889 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 11:40:02] 2025-10-12 17:39:33,910 | INFO     | [data] copytool_out thread has finished
[2025-10-12 11:40:02] 2025-10-12 17:39:34,444 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 11:40:02] 2025-10-12 17:39:38,449 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 11:40:02] 2025-10-12 17:39:42,439 | INFO     | job.realtimelogging is not enabled
[2025-10-12 11:40:02] 2025-10-12 17:39:43,444 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 11:40:02] 2025-10-12 17:39:53,337 | INFO     | [monitor] cgroup control has ended
[2025-10-12 11:40:02] 2025-10-12 17:39:55,395 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137005305112384)>', '<ExcThread(monitor, started 137004970936064)>']
[2025-10-12 11:40:02] 2025-10-12 17:40:00,411 | INFO     | all workflow threads have been joined
[2025-10-12 11:40:02] 2025-10-12 17:40:00,411 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 11:40:02] 2025-10-12 17:40:00,411 | INFO     | traces error code: 0
[2025-10-12 11:40:02] 2025-10-12 17:40:00,411 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 11:40:02] 2025-10-12 17:40:02,417 | INFO     | PID=1855052 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 11:40:02] 2025-10-12 17:40:02,417 | INFO     | .. there are 2 such processes running
[2025-10-12 11:40:02] 2025-10-12 17:40:02,418 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 11:40:02] 2025-10-12 17:40:02,418 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 11:40:02] 2025-10-12 17:40:02,418 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 11:40:02] 2025-10-12 17:40:02,418 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 11:40:02] 2025-10-12 17:40:02,418 | INFO     | [monitor] control thread has ended
[2025-10-12 11:40:02] 2025-10-12 17:40:02,500 [wrapper] ==== pilot stdout END ====
[2025-10-12 11:40:02] 2025-10-12 17:40:02,502 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 11:40:02] 2025-10-12 17:40:02,508 [wrapper] pilotpid: 1855052
[2025-10-12 11:40:02] 2025-10-12 17:40:02,512 [wrapper] Pilot exit status: 0
[2025-10-12 11:40:02] 2025-10-12 17:40:02,533 [wrapper] pandaids: 6839927828
[2025-10-12 11:40:02] 2025-10-12 17:40:02,571 [wrapper] cleanup supervisor_pilot 1888283 1855053
[2025-10-12 11:40:02] 2025-10-12 17:40:02,573 [wrapper] Test setup, not cleaning
[2025-10-12 11:40:02] 2025-10-12 17:40:02,574 [wrapper] apfmon messages muted
[2025-10-12 11:40:02] 2025-10-12 17:40:02,575 [wrapper] ==== wrapper stdout END ====
[2025-10-12 11:40:02] 2025-10-12 17:40:02,576 [wrapper] ==== wrapper stderr END ====
[2025-10-12 11:40:02]  *** Error codes and diagnostics ***
[2025-10-12 11:40:02]     "exeErrorCode": 0,
[2025-10-12 11:40:02]     "exeErrorDiag": "",
[2025-10-12 11:40:02]     "pilotErrorCode": 0,
[2025-10-12 11:40:02]     "pilotErrorDiag": "",
[2025-10-12 11:40:02]  *** Listing of results directory ***
[2025-10-12 11:40:02] total 407552
[2025-10-12 11:40:02] -rw-r--r-- 1 boinc boinc    557409 Oct 12 05:23 pilot3.tar.gz
[2025-10-12 11:40:02] -rwx------ 1 boinc boinc     36292 Oct 12 05:46 runpilot2-wrapper.sh
[2025-10-12 11:40:02] -rw-r--r-- 1 boinc boinc      5112 Oct 12 05:46 queuedata.json
[2025-10-12 11:40:02] -rw-r--r-- 1 boinc boinc       100 Oct 12 11:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 11:40:02] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 11:01 run_atlas
[2025-10-12 11:40:02] -rw-r--r-- 1 boinc boinc       105 Oct 12 11:01 job.xml
[2025-10-12 11:40:02] -rw-r--r-- 2 boinc boinc     15120 Oct 12 11:01 start_atlas.sh
[2025-10-12 11:40:02] drwxrwx--x 2 boinc boinc      4096 Oct 12 11:01 shared
[2025-10-12 11:40:02] -rw-r--r-- 2 boinc boinc    569682 Oct 12 11:01 input.tar.gz
[2025-10-12 11:40:02] -rw-r--r-- 1 boinc boinc      9979 Oct 12 11:01 init_data.xml
[2025-10-12 11:40:02] -rw-r--r-- 2 boinc boinc 218786628 Oct 12 11:01 EVNT.46676267._001368.pool.root.1
[2025-10-12 11:40:02] -rw-r--r-- 1 boinc boinc         0 Oct 12 11:01 boinc_lockfile
[2025-10-12 11:40:02] -rw-r--r-- 1 boinc boinc      2550 Oct 12 11:01 pandaJob.out
[2025-10-12 11:40:02] -rw------- 1 boinc boinc    975528 Oct 12 11:01 agis_schedconf.cvmfs.json
[2025-10-12 11:40:02] -rw------- 1 boinc boinc   1560580 Oct 12 11:01 agis_ddmendpoints.agis.ALL.json
[2025-10-12 11:40:02] drwx------ 5 boinc boinc      4096 Oct 12 11:01 pilot3
[2025-10-12 11:40:02] -rw-r--r-- 1 boinc boinc       529 Oct 12 11:39 boinc_task_state.xml
[2025-10-12 11:40:02] -rw------- 1 boinc boinc 193291166 Oct 12 11:39 HITS.46676269._077367.pool.root.1
[2025-10-12 11:40:02] -rw------- 1 boinc boinc      1023 Oct 12 11:39 memory_monitor_summary.json
[2025-10-12 11:40:02] -rw------- 1 boinc boinc    301813 Oct 12 11:39 log.46676269._077367.job.log.tgz.1
[2025-10-12 11:40:02] -rw------- 1 boinc boinc      7735 Oct 12 11:39 heartbeat.json
[2025-10-12 11:40:02] -rw-r--r-- 1 boinc boinc        27 Oct 12 11:39 wrapper_checkpoint.txt
[2025-10-12 11:40:02] -rw-r--r-- 1 boinc boinc      8192 Oct 12 11:39 boinc_mmap_file
[2025-10-12 11:40:02] -rw------- 1 boinc boinc        95 Oct 12 11:40 pilot_heartbeat.json
[2025-10-12 11:40:02] -rw------- 1 boinc boinc       822 Oct 12 11:40 pilotlog.txt
[2025-10-12 11:40:02] -rw------- 1 boinc boinc    370177 Oct 12 11:40 log.46676269._077367.job.log.1
[2025-10-12 11:40:02] -rw------- 1 boinc boinc       357 Oct 12 11:40 output.list
[2025-10-12 11:40:02] -rw-r--r-- 1 boinc boinc       620 Oct 12 11:40 runtime_log
[2025-10-12 11:40:02] -rw------- 1 boinc boinc    696320 Oct 12 11:40 result.tar.gz
[2025-10-12 11:40:02] -rw-r--r-- 1 boinc boinc      8794 Oct 12 11:40 runtime_log.err
[2025-10-12 11:40:02] -rw------- 1 boinc boinc       654 Oct 12 11:40 3JVNDmwh9R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmemTMDmjisqqn.diag
[2025-10-12 11:40:02] -rw-r--r-- 1 boinc boinc     21968 Oct 12 11:40 stderr.txt
[2025-10-12 11:40:02] HITS file was successfully produced:
[2025-10-12 11:40:02] -rw------- 1 boinc boinc 193291166 Oct 12 11:39 shared/HITS.pool.root.1
[2025-10-12 11:40:02]  *** Contents of shared directory: ***
[2025-10-12 11:40:02] total 403688
[2025-10-12 11:40:02] -rw-r--r-- 2 boinc boinc     15120 Oct 12 11:01 start_atlas.sh
[2025-10-12 11:40:02] -rw-r--r-- 2 boinc boinc    569682 Oct 12 11:01 input.tar.gz
[2025-10-12 11:40:02] -rw-r--r-- 2 boinc boinc 218786628 Oct 12 11:01 ATLAS.root_0
[2025-10-12 11:40:02] -rw------- 1 boinc boinc 193291166 Oct 12 11:39 HITS.pool.root.1
[2025-10-12 11:40:02] -rw------- 1 boinc boinc    696320 Oct 12 11:40 result.tar.gz
11:40:04 (1851206): run_atlas exited; CPU time 16574.644044
11:40:04 (1851206): called boinc_finish(0)

</stderr_txt>
]]>

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