Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
10:26:16 (2025955): wrapper (7.7.26015): starting
10:26:16 (2025955): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 10:26:16] Arguments: --nthreads 4
[2025-10-12 10:26:16] Threads: 4
[2025-10-12 10:26:16] Checking for CVMFS
[2025-10-12 10:26:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 10:26:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 10:26:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 10:26:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 10:26:16] 2.13.2.0 1976341 78 45612 151629 1 57 3359918 4096000 0 130560 0 67115 99.975 5300 973 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 10:26:16] CVMFS is ok
[2025-10-12 10:26:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 10:26:16] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 10:26:16] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 10:26:16] Further information can be found at the LHC@home message board.
[2025-10-12 10:26:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 10:26:16] Checking for apptainer binary...
[2025-10-12 10:26:16] apptainer is not installed, using version from CVMFS
[2025-10-12 10:26:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 10:26:16] WALKTOTHESUNMINT
[2025-10-12 10:26:16] apptainer works
[2025-10-12 10:26:16] Set ATHENA_PROC_NUMBER=4
[2025-10-12 10:26:16] Set ATHENA_CORE_NUMBER=4
[2025-10-12 10:26:16] Starting ATLAS job with PandaID=6839928181
[2025-10-12 10:26:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 11:43:35]  *** The last 200 lines of the pilot log: ***
[2025-10-12 11:43:35]  protocol_id=None
[2025-10-12 11:43:35]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 11:43:35]  replicas=None
[2025-10-12 11:43:35]  scope=mc23_13p6TeV
[2025-10-12 11:43:35]  status=None
[2025-10-12 11:43:35]  status_code=0
[2025-10-12 11:43:35]  storage_token=
[2025-10-12 11:43:35]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6839928181/log.46676269._077620.job.log.tgz.1
[2025-10-12 11:43:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5e/c9/log.46676269._077620.job.log.tgz.1
[2025-10-12 11:43:35]  workdir=None
[2025-10-12 11:43:35] ]
[2025-10-12 11:43:35] 2025-10-12 18:42:28,444 | INFO     | transferring file log.46676269._077620.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6839928181/log.46676269._077620.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-12 11:43:35] 2025-10-12 18:42:28,444 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6839928181/log.46676269._077620.job.log.tgz.1 /var/lib/boinc/slots/1/log.46676269._077620.job
[2025-10-12 11:43:35] 2025-10-12 18:42:28,453 | INFO     | adding to output.list: log.46676269._077620.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5e/c9/log.46676269._077620.job.log.tg
[2025-10-12 11:43:35] 2025-10-12 18:42:28,453 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 11:43:35] 2025-10-12 18:42:28,453 | INFO     | summary of transferred files:
[2025-10-12 11:43:35] 2025-10-12 18:42:28,453 | INFO     |  -- lfn=log.46676269._077620.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 11:43:35] 2025-10-12 18:42:28,454 | INFO     | stage-out finished correctly
[2025-10-12 11:43:35] 2025-10-12 18:42:29,517 | INFO     | time since job start (4566s) is within the limit (172800.0s)
[2025-10-12 11:43:35] 2025-10-12 18:42:30,141 | INFO     | monitor loop #350: job 0:6839928181 is in state 'finished'
[2025-10-12 11:43:35] 2025-10-12 18:42:30,141 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 11:43:35] 2025-10-12 18:42:30,741 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 11:43:35] 2025-10-12 18:42:31,226 | INFO     | job 6839928181 has state=finished
[2025-10-12 11:43:35] 2025-10-12 18:42:31,227 | INFO     | preparing for final server update for job 6839928181 in state='finished'
[2025-10-12 11:43:35] 2025-10-12 18:42:31,227 | INFO     | this job has now completed (state=finished)
[2025-10-12 11:43:35] 2025-10-12 18:42:31,227 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 11:43:35] 2025-10-12 18:42:31,227 | INFO     | log transfer has been attempted: DONE
[2025-10-12 11:43:35] 2025-10-12 18:42:31,227 | INFO     | job 6839928181 has finished - writing final server update
[2025-10-12 11:43:35] 2025-10-12 18:42:31,227 | INFO     | total number of processed events: 400 (read)
[2025-10-12 11:43:35] 2025-10-12 18:42:31,228 | INFO     | executing command: lscpu
[2025-10-12 11:43:35] 2025-10-12 18:42:31,239 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 11:43:35] 2025-10-12 18:42:31,522 | INFO     | time since job start (4568s) is within the limit (172800.0s)
[2025-10-12 11:43:35] 2025-10-12 18:42:32,643 | INFO     | monitor loop #351: job 0:6839928181 is in state 'finished'
[2025-10-12 11:43:35] 2025-10-12 18:42:32,644 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 11:43:35] 2025-10-12 18:42:33,527 | INFO     | time since job start (4570s) is within the limit (172800.0s)
[2025-10-12 11:43:35] 2025-10-12 18:42:34,810 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 11:43:35] 2025-10-12 18:42:34,811 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4600.0494375
[2025-10-12 11:43:35] 2025-10-12 18:42:34,813 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6839928181/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 11:43:35] 2025-10-12 18:42:34,813 | INFO     | extracted standard info from prmon json
[2025-10-12 11:43:35] 2025-10-12 18:42:34,813 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 11:43:35] 2025-10-12 18:42:34,813 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 11:43:35] 2025-10-12 18:42:34,813 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 11:43:35] 2025-10-12 18:42:34,813 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 11:43:35] 2025-10-12 18:42:34,814 | INFO     | fitting pss+swap vs Time
[2025-10-12 11:43:35] 2025-10-12 18:42:34,814 | INFO     | sum of square deviations: 97479037.0
[2025-10-12 11:43:35] 2025-10-12 18:42:34,814 | INFO     | sum of deviations: -11047532063.0
[2025-10-12 11:43:35] 2025-10-12 18:42:34,814 | INFO     | mean x: 1760292348.5
[2025-10-12 11:43:35] 2025-10-12 18:42:34,814 | INFO     | mean y: 2440641.0588235296
[2025-10-12 11:43:35] 2025-10-12 18:42:34,814 | INFO     | -- intersect: 199500576433.14017
[2025-10-12 11:43:35] 2025-10-12 18:42:34,814 | INFO     | intersect: 199500576433.14017
[2025-10-12 11:43:35] 2025-10-12 18:42:34,814 | INFO     | chi2: 0.17647843505438274
[2025-10-12 11:43:35] 2025-10-12 18:42:34,814 | INFO     | -- intersect: 199500576433.14017
[2025-10-12 11:43:35] 2025-10-12 18:42:34,814 | INFO     | current memory leak: -113.33 B/s (using 68 data points, chi2=0.18)
[2025-10-12 11:43:35] 2025-10-12 18:42:34,814 | INFO     | could have reported an average CPU frequency of 4600 MHz (6 samples)
[2025-10-12 11:43:35] 2025-10-12 18:42:34,814 | INFO     | ..............................
[2025-10-12 11:43:35] 2025-10-12 18:42:34,815 | INFO     | . Timing measurements:
[2025-10-12 11:43:35] 2025-10-12 18:42:34,815 | INFO     | . get job = 0 s
[2025-10-12 11:43:35] 2025-10-12 18:42:34,815 | INFO     | . initial setup = 2 s
[2025-10-12 11:43:35] 2025-10-12 18:42:34,815 | INFO     | . payload setup = 2 s
[2025-10-12 11:43:35] 2025-10-12 18:42:34,815 | INFO     | . stage-in = 0 s
[2025-10-12 11:43:35] 2025-10-12 18:42:34,815 | INFO     | . payload execution = 4546 s
[2025-10-12 11:43:35] 2025-10-12 18:42:34,815 | INFO     | . stage-out = 0 s
[2025-10-12 11:43:35] 2025-10-12 18:42:34,815 | INFO     | . log creation = 0 s
[2025-10-12 11:43:35] 2025-10-12 18:42:34,815 | INFO     | ..............................
[2025-10-12 11:43:35] 2025-10-12 18:42:34,846 | INFO     | 
[2025-10-12 11:43:35] 2025-10-12 18:42:34,846 | INFO     | job summary report
[2025-10-12 11:43:35] 2025-10-12 18:42:34,846 | INFO     | --------------------------------------------------
[2025-10-12 11:43:35] 2025-10-12 18:42:34,847 | INFO     | PanDA job id: 6839928181
[2025-10-12 11:43:35] 2025-10-12 18:42:34,847 | INFO     | task id: 46676269
[2025-10-12 11:43:35] 2025-10-12 18:42:34,847 | INFO     | errors: (none)
[2025-10-12 11:43:35] 2025-10-12 18:42:34,847 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 11:43:35] 2025-10-12 18:42:34,847 | INFO     | pilot state: finished 
[2025-10-12 11:43:35] 2025-10-12 18:42:34,847 | INFO     | transexitcode: 0
[2025-10-12 11:43:35] 2025-10-12 18:42:34,847 | INFO     | exeerrorcode: 0
[2025-10-12 11:43:35] 2025-10-12 18:42:34,847 | INFO     | exeerrordiag: 
[2025-10-12 11:43:35] 2025-10-12 18:42:34,847 | INFO     | exitcode: 0
[2025-10-12 11:43:35] 2025-10-12 18:42:34,847 | INFO     | exitmsg: OK
[2025-10-12 11:43:35] 2025-10-12 18:42:34,847 | INFO     | cpuconsumptiontime: 17674 s
[2025-10-12 11:43:35] 2025-10-12 18:42:34,847 | INFO     | nevents: 400
[2025-10-12 11:43:35] 2025-10-12 18:42:34,847 | INFO     | neventsw: 0
[2025-10-12 11:43:35] 2025-10-12 18:42:34,847 | INFO     | pid: 2036274
[2025-10-12 11:43:35] 2025-10-12 18:42:34,847 | INFO     | pgrp: 2036274
[2025-10-12 11:43:35] 2025-10-12 18:42:34,847 | INFO     | corecount: 4
[2025-10-12 11:43:35] 2025-10-12 18:42:34,847 | INFO     | event service: False
[2025-10-12 11:43:35] 2025-10-12 18:42:34,847 | INFO     | sizes: {0: 2348857, 2: 2349119, 10: 2349147, 4552: 2375375, 4553: 2384373, 4555: 2384429, 4559: 2384751}
[2025-10-12 11:43:35] 2025-10-12 18:42:34,847 | INFO     | --------------------------------------------------
[2025-10-12 11:43:35] 2025-10-12 18:42:34,847 | INFO     | 
[2025-10-12 11:43:35] 2025-10-12 18:42:34,847 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-10-12 11:43:35] 2025-10-12 18:42:34,857 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 11:43:35] 2025-10-12 18:42:34,858 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 11:43:35] 2025-10-12 18:42:34,858 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 11:43:35] 2025-10-12 18:42:34,858 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 11:43:35] 2025-10-12 18:42:34,858 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 11:43:35] 2025-10-12 18:42:34,858 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 11:43:35] 2025-10-12 18:42:34,858 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 11:43:35] 2025-10-12 18:42:34,858 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 11:43:35] 2025-10-12 18:42:34,858 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 11:43:35] 2025-10-12 18:42:34,858 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 11:43:35] 2025-10-12 18:42:34,858 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 11:43:35] 2025-10-12 18:42:34,858 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 11:43:35] 2025-10-12 18:42:34,858 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 11:43:35] 2025-10-12 18:42:34,858 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 11:43:35] 2025-10-12 18:42:34,858 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 11:43:35] 2025-10-12 18:42:34,858 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 11:43:35] 2025-10-12 18:42:34,858 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 11:43:35] 2025-10-12 18:42:34,858 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 11:43:35] 2025-10-12 18:42:34,858 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 11:43:35] 2025-10-12 18:42:34,858 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 11:43:35] 2025-10-12 18:42:34,858 | INFO     | job 6839928181 has completed (purged errors)
[2025-10-12 11:43:35] 2025-10-12 18:42:34,858 | INFO     | overall cleanup function is called
[2025-10-12 11:43:35] 2025-10-12 18:42:35,864 | INFO     | --- collectZombieJob: --- 10, [2036274]
[2025-10-12 11:43:35] 2025-10-12 18:42:35,864 | INFO     | zombie collector waiting for pid 2036274
[2025-10-12 11:43:35] 2025-10-12 18:42:35,864 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 11:43:35] 2025-10-12 18:42:35,864 | INFO     | collected zombie processes
[2025-10-12 11:43:35] 2025-10-12 18:42:35,865 | INFO     | will attempt to kill all subprocesses of pid=2036274
[2025-10-12 11:43:35] 2025-10-12 18:42:35,922 | INFO     | process IDs to be killed: [2036274] (in reverse order)
[2025-10-12 11:43:35] 2025-10-12 18:42:35,950 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 11:43:35] 2025-10-12 18:42:35,950 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 11:43:35] 2025-10-12 18:42:35,952 | INFO     | did not find any defunct processes belonging to 2036274
[2025-10-12 11:43:35] 2025-10-12 18:42:35,953 | INFO     | did not find any defunct processes belonging to 2036274
[2025-10-12 11:43:35] 2025-10-12 18:42:35,953 | INFO     | ready for new job
[2025-10-12 11:43:35] 2025-10-12 18:42:35,953 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 11:43:35] 2025-10-12 18:42:35,954 | INFO     | ***************************************
[2025-10-12 11:43:35] 2025-10-12 18:42:35,954 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 11:43:35] 2025-10-12 18:42:35,954 | INFO     | ***************************************
[2025-10-12 11:43:35] 2025-10-12 18:42:35,954 | INFO     | 
[2025-10-12 11:43:35] 2025-10-12 18:42:35,954 | INFO     | architecture information:
[2025-10-12 11:43:35] 2025-10-12 18:42:35,955 | INFO     | executing command: cat /etc/os-release
[2025-10-12 11:43:35] 2025-10-12 18:42:35,961 | INFO     | cat /etc/os-release:
[2025-10-12 11:43:35] NAME="CentOS Linux"
[2025-10-12 11:43:35] VERSION="7 (Core)"
[2025-10-12 11:43:35] ID="centos"
[2025-10-12 11:43:35] ID_LIKE="rhel fedora"
[2025-10-12 11:43:35] VERSION_ID="7"
[2025-10-12 11:43:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 11:43:35] ANSI_COLOR="0;31"
[2025-10-12 11:43:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 11:43:35] HOME_URL="https://www.centos.org/"
[2025-10-12 11:43:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 11:43:35] 
[2025-10-12 11:43:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 11:43:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 11:43:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 11:43:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 11:43:35] 
[2025-10-12 11:43:35] 2025-10-12 18:42:35,962 | INFO     | ***************************************
[2025-10-12 11:43:35] 2025-10-12 18:42:36,464 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-10-12 11:43:35] 2025-10-12 18:42:36,473 | INFO     | sufficient remaining disk space (707074719744 B)
[2025-10-12 11:43:35] 2025-10-12 18:42:36,473 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 11:43:35] 2025-10-12 18:42:36,474 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 11:43:35] 2025-10-12 18:42:36,474 | INFO     | update_server=False
[2025-10-12 11:43:35] 2025-10-12 18:42:36,474 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 11:43:35] 2025-10-12 18:42:36,474 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:43:35] 2025-10-12 18:42:36,474 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:43:35] 2025-10-12 18:42:36,474 | INFO     | aborting loop
[2025-10-12 11:43:35] 2025-10-12 18:42:36,492 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 11:43:35] 2025-10-12 18:42:36,787 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 11:43:35] 2025-10-12 18:42:37,478 | INFO     | [job] retrieve thread has finished
[2025-10-12 11:43:35] 2025-10-12 18:42:37,478 | INFO     | [job] job monitor thread has finished
[2025-10-12 11:43:35] 2025-10-12 18:42:37,479 | INFO     | [job] queue monitor thread has finished
[2025-10-12 11:43:35] 2025-10-12 18:42:37,564 | INFO     | all data control threads have been joined
[2025-10-12 11:43:35] 2025-10-12 18:42:37,612 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 11:43:35] 2025-10-12 18:42:37,895 | INFO     | all payload control threads have been joined
[2025-10-12 11:43:35] 2025-10-12 18:42:38,056 | INFO     | all job control threads have been joined
[2025-10-12 11:43:35] 2025-10-12 18:42:38,230 | INFO     | [job] validate thread has finished
[2025-10-12 11:43:35] 2025-10-12 18:42:38,245 | INFO     | [payload] validate_post thread has finished
[2025-10-12 11:43:35] 2025-10-12 18:42:38,331 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 11:43:35] 2025-10-12 18:42:38,415 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 11:43:35] 2025-10-12 18:42:38,497 | INFO     | [data] copytool_out thread has finished
[2025-10-12 11:43:35] 2025-10-12 18:42:38,569 | INFO     | [data] control thread has finished
[2025-10-12 11:43:35] 2025-10-12 18:42:38,639 | INFO     | [payload] failed_post thread has finished
[2025-10-12 11:43:35] 2025-10-12 18:42:38,702 | INFO     | [data] copytool_in thread has finished
[2025-10-12 11:43:35] 2025-10-12 18:42:38,900 | INFO     | [payload] control thread has finished
[2025-10-12 11:43:35] 2025-10-12 18:42:39,061 | INFO     | [job] control thread has finished
[2025-10-12 11:43:35] 2025-10-12 18:42:40,792 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 11:43:35] 2025-10-12 18:42:47,062 | INFO     | job.realtimelogging is not enabled
[2025-10-12 11:43:35] 2025-10-12 18:42:48,067 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 11:43:35] 2025-10-12 18:43:06,651 | INFO     | PID=2029728 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 11:43:35] 2025-10-12 18:43:06,651 | INFO     | .. there are 2 such processes running
[2025-10-12 11:43:35] 2025-10-12 18:43:06,652 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 11:43:35] 2025-10-12 18:43:06,652 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 11:43:35] 2025-10-12 18:43:06,652 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 11:43:35] 2025-10-12 18:43:30,431 | INFO     | [monitor] cgroup control has ended
[2025-10-12 11:43:35] 2025-10-12 18:43:30,808 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 131106607953728)>', '<ExcThread(monitor, started 131106074515200)>']
[2025-10-12 11:43:35] 2025-10-12 18:43:31,772 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 11:43:35] 2025-10-12 18:43:31,772 | INFO     | [monitor] control thread has ended
[2025-10-12 11:43:35] 2025-10-12 18:43:35,832 | INFO     | all workflow threads have been joined
[2025-10-12 11:43:35] 2025-10-12 18:43:35,832 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 11:43:35] 2025-10-12 18:43:35,833 | INFO     | traces error code: 0
[2025-10-12 11:43:35] 2025-10-12 18:43:35,833 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 11:43:35] 2025-10-12 18:43:35,892 [wrapper] ==== pilot stdout END ====
[2025-10-12 11:43:35] 2025-10-12 18:43:35,893 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 11:43:35] 2025-10-12 18:43:35,894 [wrapper] pilotpid: 2029728
[2025-10-12 11:43:35] 2025-10-12 18:43:35,895 [wrapper] Pilot exit status: 0
[2025-10-12 11:43:35] 2025-10-12 18:43:35,899 [wrapper] pandaids: 6839928181
[2025-10-12 11:43:35] 2025-10-12 18:43:35,920 [wrapper] cleanup supervisor_pilot 2089866 2029729
[2025-10-12 11:43:35] 2025-10-12 18:43:35,921 [wrapper] Test setup, not cleaning
[2025-10-12 11:43:35] 2025-10-12 18:43:35,922 [wrapper] apfmon messages muted
[2025-10-12 11:43:35] 2025-10-12 18:43:35,923 [wrapper] ==== wrapper stdout END ====
[2025-10-12 11:43:35] 2025-10-12 18:43:35,924 [wrapper] ==== wrapper stderr END ====
[2025-10-12 11:43:35]  *** Error codes and diagnostics ***
[2025-10-12 11:43:35]     "exeErrorCode": 0,
[2025-10-12 11:43:35]     "exeErrorDiag": "",
[2025-10-12 11:43:35]     "pilotErrorCode": 0,
[2025-10-12 11:43:35]     "pilotErrorDiag": "",
[2025-10-12 11:43:35]  *** Listing of results directory ***
[2025-10-12 11:43:35] total 414480
[2025-10-12 11:43:35] -rw-r--r-- 1 boinc boinc    557409 Oct 12 04:54 pilot3.tar.gz
[2025-10-12 11:43:35] -rw-r--r-- 1 boinc boinc      5112 Oct 12 05:05 queuedata.json
[2025-10-12 11:43:35] -rwx------ 1 boinc boinc     36292 Oct 12 05:06 runpilot2-wrapper.sh
[2025-10-12 11:43:35] -rw-r--r-- 1 boinc boinc       100 Oct 12 10:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 11:43:35] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 10:26 run_atlas
[2025-10-12 11:43:35] -rw-r--r-- 1 boinc boinc       105 Oct 12 10:26 job.xml
[2025-10-12 11:43:35] -rw-r--r-- 2 boinc boinc 222449892 Oct 12 10:26 EVNT.46676267._003719.pool.root.1
[2025-10-12 11:43:35] -rw-r--r-- 2 boinc boinc    569680 Oct 12 10:26 input.tar.gz
[2025-10-12 11:43:35] -rw-r--r-- 2 boinc boinc     15120 Oct 12 10:26 start_atlas.sh
[2025-10-12 11:43:35] drwxrwx--x 2 boinc boinc      4096 Oct 12 10:26 shared
[2025-10-12 11:43:35] -rw-r--r-- 1 boinc boinc         0 Oct 12 10:26 boinc_setup_complete
[2025-10-12 11:43:35] -rw-r--r-- 1 boinc boinc      9041 Oct 12 10:26 init_data.xml
[2025-10-12 11:43:35] -rw-r--r-- 1 boinc boinc         0 Oct 12 10:26 boinc_lockfile
[2025-10-12 11:43:35] -rw-r--r-- 1 boinc boinc      2550 Oct 12 10:26 pandaJob.out
[2025-10-12 11:43:35] -rw------- 1 boinc boinc    975528 Oct 12 10:26 agis_schedconf.cvmfs.json
[2025-10-12 11:43:35] -rw------- 1 boinc boinc   1560580 Oct 12 10:26 agis_ddmendpoints.agis.ALL.json
[2025-10-12 11:43:35] drwx------ 5 boinc boinc      4096 Oct 12 10:26 pilot3
[2025-10-12 11:43:35] -rw------- 1 boinc boinc 196156050 Oct 12 11:42 HITS.46676269._077620.pool.root.1
[2025-10-12 11:43:35] -rw------- 1 boinc boinc      1026 Oct 12 11:42 memory_monitor_summary.json
[2025-10-12 11:43:35] -rw------- 1 boinc boinc    270849 Oct 12 11:42 log.46676269._077620.job.log.tgz.1
[2025-10-12 11:43:35] -rw-r--r-- 1 boinc boinc       529 Oct 12 11:42 boinc_task_state.xml
[2025-10-12 11:43:35] -rw------- 1 boinc boinc      7801 Oct 12 11:42 heartbeat.json
[2025-10-12 11:43:35] -rw------- 1 boinc boinc        95 Oct 12 11:43 pilot_heartbeat.json
[2025-10-12 11:43:35] -rw-r--r-- 1 boinc boinc      8192 Oct 12 11:43 boinc_mmap_file
[2025-10-12 11:43:35] -rw-r--r-- 1 boinc boinc        27 Oct 12 11:43 wrapper_checkpoint.txt
[2025-10-12 11:43:35] -rw------- 1 boinc boinc      4896 Oct 12 11:43 pilotlog.txt
[2025-10-12 11:43:35] -rw------- 1 boinc boinc    680213 Oct 12 11:43 log.46676269._077620.job.log.1
[2025-10-12 11:43:35] -rw------- 1 boinc boinc       357 Oct 12 11:43 output.list
[2025-10-12 11:43:35] -rw-r--r-- 1 boinc boinc       620 Oct 12 11:43 runtime_log
[2025-10-12 11:43:35] -rw------- 1 boinc boinc    972800 Oct 12 11:43 result.tar.gz
[2025-10-12 11:43:35] -rw-r--r-- 1 boinc boinc      8693 Oct 12 11:43 runtime_log.err
[2025-10-12 11:43:35] -rw------- 1 boinc boinc       647 Oct 12 11:43 aqgMDm109R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmgpTMDmm1r4On.diag
[2025-10-12 11:43:35] -rw-r--r-- 1 boinc boinc     21822 Oct 12 11:43 stderr.txt
[2025-10-12 11:43:35] HITS file was successfully produced:
[2025-10-12 11:43:35] -rw------- 1 boinc boinc 196156050 Oct 12 11:42 shared/HITS.pool.root.1
[2025-10-12 11:43:35]  *** Contents of shared directory: ***
[2025-10-12 11:43:35] total 410336
[2025-10-12 11:43:35] -rw-r--r-- 2 boinc boinc 222449892 Oct 12 10:26 ATLAS.root_0
[2025-10-12 11:43:35] -rw-r--r-- 2 boinc boinc    569680 Oct 12 10:26 input.tar.gz
[2025-10-12 11:43:35] -rw-r--r-- 2 boinc boinc     15120 Oct 12 10:26 start_atlas.sh
[2025-10-12 11:43:35] -rw------- 1 boinc boinc 196156050 Oct 12 11:42 HITS.pool.root.1
[2025-10-12 11:43:35] -rw------- 1 boinc boinc    972800 Oct 12 11:43 result.tar.gz
11:43:37 (2025955): run_atlas exited; CPU time 17714.171944
11:43:37 (2025955): called boinc_finish(0)

</stderr_txt>
]]>

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