Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:09:02 (19622): wrapper (7.7.26015): starting
11:09:02 (19622): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 11:09:02] Arguments: --nthreads 8
[2025-10-12 11:09:02] Threads: 8
[2025-10-12 11:09:02] Checking for CVMFS
[2025-10-12 11:09:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 11:09:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 11:09:02] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 11:09:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 11:09:03] 2.11.2.0 5524 53045 126768 151623 2 59 12635242 18432000 1833 130560 0 47239864 99.975 2372507 39764 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 11:09:03] CVMFS is ok
[2025-10-12 11:09:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 11:09:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 11:09:03] Further information can be found at the LHC@home message board.
[2025-10-12 11:09:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 11:09:03] Checking for apptainer binary...
[2025-10-12 11:09:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 11:09:03] Running /usr/bin/apptainer --version
[2025-10-12 11:09:03] apptainer version 1.3.2-1.el7
[2025-10-12 11:09:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 11:09:03] c-206-5.aglt2.org
[2025-10-12 11:09:03] apptainer works
[2025-10-12 11:09:03] Set ATHENA_PROC_NUMBER=8
[2025-10-12 11:09:03] Set ATHENA_CORE_NUMBER=8
[2025-10-12 11:09:03] Starting ATLAS job with PandaID=6840082163
[2025-10-12 11:09:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 14:15:38]  *** The last 200 lines of the pilot log: ***
[2025-10-12 14:15:38] 2025-10-12 18:14:49,989 | INFO     | mean y: 2474067.0274725277
[2025-10-12 14:15:38] 2025-10-12 18:14:49,989 | INFO     | -- intersect: -26158622650.838844
[2025-10-12 14:15:38] 2025-10-12 18:14:49,989 | INFO     | intersect: -26158622650.838844
[2025-10-12 14:15:38] 2025-10-12 18:14:49,990 | INFO     | chi2: 1.2908736366069502
[2025-10-12 14:15:38] 2025-10-12 18:14:49,990 | INFO     | sum of square deviations: 1719429448.0
[2025-10-12 14:15:38] 2025-10-12 18:14:49,992 | INFO     | sum of deviations: 27006803463.0
[2025-10-12 14:15:38] 2025-10-12 18:14:49,992 | INFO     | mean x: 1760287148.0
[2025-10-12 14:15:38] 2025-10-12 18:14:49,992 | INFO     | mean y: 2473278.802259887
[2025-10-12 14:15:38] 2025-10-12 18:14:49,992 | INFO     | -- intersect: -27646075546.37803
[2025-10-12 14:15:38] 2025-10-12 18:14:49,993 | INFO     | intersect: -27646075546.37803
[2025-10-12 14:15:38] 2025-10-12 18:14:49,993 | INFO     | chi2: 1.291323184229066
[2025-10-12 14:15:38] 2025-10-12 18:14:49,993 | INFO     | current chi2=1.291323184229066 (change=-0.03482506802892263 %)
[2025-10-12 14:15:38] 2025-10-12 18:14:49,993 | INFO     | right removable region: 176
[2025-10-12 14:15:38] 2025-10-12 18:14:49,994 | INFO     | sum of square deviations: 1719429448.0
[2025-10-12 14:15:38] 2025-10-12 18:14:49,995 | INFO     | sum of deviations: 2894062039.9999995
[2025-10-12 14:15:38] 2025-10-12 18:14:49,996 | INFO     | mean x: 1760287453.0
[2025-10-12 14:15:38] 2025-10-12 18:14:49,996 | INFO     | mean y: 2499045.926553672
[2025-10-12 14:15:38] 2025-10-12 18:14:49,996 | INFO     | -- intersect: -2960333248.9031343
[2025-10-12 14:15:38] 2025-10-12 18:14:49,996 | INFO     | intersect: -2960333248.9031343
[2025-10-12 14:15:38] 2025-10-12 18:14:49,997 | INFO     | chi2: 0.004498544650296864
[2025-10-12 14:15:38] 2025-10-12 18:14:49,997 | INFO     | current chi2=0.004498544650296864 (change=99.65151161796742 %)
[2025-10-12 14:15:38] 2025-10-12 18:14:49,997 | INFO     | sum of square deviations: 1577789583.0
[2025-10-12 14:15:38] 2025-10-12 18:14:49,999 | INFO     | sum of deviations: 1114267419.0000002
[2025-10-12 14:15:38] 2025-10-12 18:14:49,999 | INFO     | mean x: 1760287605.5
[2025-10-12 14:15:38] 2025-10-12 18:14:49,999 | INFO     | mean y: 2500953.2674418604
[2025-10-12 14:15:38] 2025-10-12 18:14:49,999 | INFO     | -- intersect: -1240650318.6206143
[2025-10-12 14:15:38] 2025-10-12 18:14:50,000 | INFO     | intersect: -1240650318.6206143
[2025-10-12 14:15:38] 2025-10-12 18:14:50,000 | INFO     | chi2: 0.00123429963977814
[2025-10-12 14:15:38] 2025-10-12 18:14:50,000 | INFO     | current chi2=0.00123429963977814 (change=72.56224544316377 %)
[2025-10-12 14:15:38] 2025-10-12 18:14:50,001 | INFO     | sum of square deviations: 1444149868.0
[2025-10-12 14:15:38] 2025-10-12 18:14:50,002 | INFO     | sum of deviations: 647606133.9999989
[2025-10-12 14:15:38] 2025-10-12 18:14:50,002 | INFO     | mean x: 1760287758.0
[2025-10-12 14:15:38] 2025-10-12 18:14:50,002 | INFO     | mean y: 2501482.4790419163
[2025-10-12 14:15:38] 2025-10-12 18:14:50,003 | INFO     | -- intersect: -786871680.8926045
[2025-10-12 14:15:38] 2025-10-12 18:14:50,003 | INFO     | intersect: -786871680.8926045
[2025-10-12 14:15:38] 2025-10-12 18:14:50,003 | INFO     | chi2: 0.001012552256507214
[2025-10-12 14:15:38] 2025-10-12 18:14:50,003 | INFO     | current chi2=0.001012552256507214 (change=17.965441787764288 %)
[2025-10-12 14:15:38] 2025-10-12 18:14:50,004 | INFO     | left removable region: 30
[2025-10-12 14:15:38] 2025-10-12 18:14:50,004 | INFO     | sum of square deviations: 964976232.5
[2025-10-12 14:15:38] 2025-10-12 18:14:50,005 | INFO     | sum of deviations: -409232560.5
[2025-10-12 14:15:38] 2025-10-12 18:14:50,005 | INFO     | mean x: 1760288032.5
[2025-10-12 14:15:38] 2025-10-12 18:14:50,006 | INFO     | mean y: 2502917.390410959
[2025-10-12 14:15:38] 2025-10-12 18:14:50,006 | INFO     | -- intersect: 749015789.413383
[2025-10-12 14:15:38] 2025-10-12 18:14:50,006 | INFO     | intersect: 749015789.413383
[2025-10-12 14:15:38] 2025-10-12 18:14:50,006 | INFO     | chi2: 0.00038438201537630115
[2025-10-12 14:15:38] 2025-10-12 18:14:50,007 | INFO     | -- intersect: 749015789.413383
[2025-10-12 14:15:38] 2025-10-12 18:14:50,007 | INFO     | current memory leak: -0.42 B/s (using 146 data points, chi2=0.00)
[2025-10-12 14:15:38] 2025-10-12 18:14:50,008 | INFO     | size of work directory /tmp/boinchome/slots/1/PanDA_Pilot-6840082163: 3722316 B (within 2537553920 B limit)
[2025-10-12 14:15:38] 2025-10-12 18:14:50,008 | INFO     | could have reported an average CPU frequency of 2560 MHz (10 samples)
[2025-10-12 14:15:38] 2025-10-12 18:14:50,008 | INFO     | pfn file=/tmp/boinchome/slots/1/PanDA_Pilot-6840082163/HITS.46676269._079978.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-12 14:15:38] 2025-10-12 18:14:50,008 | INFO     | ..............................
[2025-10-12 14:15:38] 2025-10-12 18:14:50,008 | INFO     | total size of present files: 0 B (workdir size: 3722316 B)
[2025-10-12 14:15:38] 2025-10-12 18:14:50,009 | INFO     | . Timing measurements:
[2025-10-12 14:15:38] 2025-10-12 18:14:50,009 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/1/PanDA_Pilot-6840082163/HITS.46676269._079978.pool.root.1 since it does not exist
[2025-10-12 14:15:38] 2025-10-12 18:14:50,009 | INFO     | . get job = 0 s
[2025-10-12 14:15:38] 2025-10-12 18:14:50,009 | INFO     | . initial setup = 2 s
[2025-10-12 14:15:38] 2025-10-12 18:14:50,009 | INFO     | . payload setup = 4 s
[2025-10-12 14:15:38] 2025-10-12 18:14:50,010 | INFO     | . stage-in = 0 s
[2025-10-12 14:15:38] 2025-10-12 18:14:50,010 | INFO     | . payload execution = 11103 s
[2025-10-12 14:15:38] 2025-10-12 18:14:50,010 | INFO     | . stage-out = 2 s
[2025-10-12 14:15:38] 2025-10-12 18:14:50,010 | INFO     | . log creation = 0 s
[2025-10-12 14:15:38] 2025-10-12 18:14:50,011 | INFO     | ..............................
[2025-10-12 14:15:38] 2025-10-12 18:14:50,208 | INFO     | 
[2025-10-12 14:15:38] 2025-10-12 18:14:50,209 | INFO     | job summary report
[2025-10-12 14:15:38] 2025-10-12 18:14:50,209 | INFO     | --------------------------------------------------
[2025-10-12 14:15:38] 2025-10-12 18:14:50,209 | INFO     | PanDA job id: 6840082163
[2025-10-12 14:15:38] 2025-10-12 18:14:50,210 | INFO     | task id: 46676269
[2025-10-12 14:15:38] 2025-10-12 18:14:50,210 | INFO     | errors: (none)
[2025-10-12 14:15:38] 2025-10-12 18:14:50,210 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 14:15:38] 2025-10-12 18:14:50,211 | INFO     | pilot state: finished 
[2025-10-12 14:15:38] 2025-10-12 18:14:50,211 | INFO     | transexitcode: 0
[2025-10-12 14:15:38] 2025-10-12 18:14:50,211 | INFO     | exeerrorcode: 0
[2025-10-12 14:15:38] 2025-10-12 18:14:50,211 | INFO     | exeerrordiag: 
[2025-10-12 14:15:38] 2025-10-12 18:14:50,212 | INFO     | exitcode: 0
[2025-10-12 14:15:38] 2025-10-12 18:14:50,212 | INFO     | exitmsg: OK
[2025-10-12 14:15:38] 2025-10-12 18:14:50,212 | INFO     | cpuconsumptiontime: 82204 s
[2025-10-12 14:15:38] 2025-10-12 18:14:50,212 | INFO     | nevents: 400
[2025-10-12 14:15:38] 2025-10-12 18:14:50,213 | INFO     | neventsw: 0
[2025-10-12 14:15:38] 2025-10-12 18:14:50,213 | INFO     | pid: 29726
[2025-10-12 14:15:38] 2025-10-12 18:14:50,213 | INFO     | pgrp: 29726
[2025-10-12 14:15:38] 2025-10-12 18:14:50,214 | INFO     | corecount: 8
[2025-10-12 14:15:38] 2025-10-12 18:14:50,214 | INFO     | event service: False
[2025-10-12 14:15:38] 2025-10-12 18:14:50,214 | INFO     | sizes: {0: 2348635, 1: 2348834, 2: 2348834, 4: 2349124, 12: 2349152, 11111: 2378426, 11112: 2378553, 11114: 2387607, 11116: 2387663, 11119: 2387885}
[2025-10-12 14:15:38] 2025-10-12 18:14:50,214 | INFO     | --------------------------------------------------
[2025-10-12 14:15:38] 2025-10-12 18:14:50,215 | INFO     | 
[2025-10-12 14:15:38] 2025-10-12 18:14:50,215 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 14:15:38] 2025-10-12 18:14:50,252 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 14:15:38] 2025-10-12 18:14:50,253 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 14:15:38] 2025-10-12 18:14:50,253 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 14:15:38] 2025-10-12 18:14:50,253 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 14:15:38] 2025-10-12 18:14:50,253 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 14:15:38] 2025-10-12 18:14:50,253 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 14:15:38] 2025-10-12 18:14:50,254 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 14:15:38] 2025-10-12 18:14:50,254 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 14:15:38] 2025-10-12 18:14:50,254 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 14:15:38] 2025-10-12 18:14:50,254 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 14:15:38] 2025-10-12 18:14:50,255 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 14:15:38] 2025-10-12 18:14:50,255 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 14:15:38] 2025-10-12 18:14:50,255 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 14:15:38] 2025-10-12 18:14:50,255 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 14:15:38] 2025-10-12 18:14:50,255 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 14:15:38] 2025-10-12 18:14:50,256 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 14:15:38] 2025-10-12 18:14:50,256 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 14:15:38] 2025-10-12 18:14:50,256 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 14:15:38] 2025-10-12 18:14:50,256 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 14:15:38] 2025-10-12 18:14:50,257 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 14:15:38] 2025-10-12 18:14:50,257 | INFO     | job 6840082163 has completed (purged errors)
[2025-10-12 14:15:38] 2025-10-12 18:14:50,257 | INFO     | overall cleanup function is called
[2025-10-12 14:15:38] 2025-10-12 18:14:50,323 | INFO     | number of running child processes to parent process 29726: 1
[2025-10-12 14:15:38] 2025-10-12 18:14:50,324 | INFO     | maximum number of monitored processes: 6
[2025-10-12 14:15:38] 2025-10-12 18:14:50,324 | INFO     | aborting job monitoring since job object (job id=6840082163) has expired
[2025-10-12 14:15:38] 2025-10-12 18:14:51,266 | INFO     | --- collectZombieJob: --- 10, [29726]
[2025-10-12 14:15:38] 2025-10-12 18:14:51,266 | INFO     | zombie collector waiting for pid 29726
[2025-10-12 14:15:38] 2025-10-12 18:14:51,266 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 14:15:38] 2025-10-12 18:14:51,267 | INFO     | collected zombie processes
[2025-10-12 14:15:38] 2025-10-12 18:14:51,267 | INFO     | will attempt to kill all subprocesses of pid=29726
[2025-10-12 14:15:38] 2025-10-12 18:14:51,427 | INFO     | process IDs to be killed: [29726] (in reverse order)
[2025-10-12 14:15:38] 2025-10-12 18:14:51,482 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 14:15:38] 2025-10-12 18:14:51,482 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 14:15:38] 2025-10-12 18:14:51,487 | INFO     | did not find any defunct processes belonging to 29726
[2025-10-12 14:15:38] 2025-10-12 18:14:51,492 | INFO     | did not find any defunct processes belonging to 29726
[2025-10-12 14:15:38] 2025-10-12 18:14:51,492 | INFO     | ready for new job
[2025-10-12 14:15:38] 2025-10-12 18:14:51,492 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 14:15:38] 2025-10-12 18:14:51,494 | INFO     | ***************************************
[2025-10-12 14:15:38] 2025-10-12 18:14:51,494 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 14:15:38] 2025-10-12 18:14:51,494 | INFO     | ***************************************
[2025-10-12 14:15:38] 2025-10-12 18:14:51,494 | INFO     | 
[2025-10-12 14:15:38] 2025-10-12 18:14:51,496 | INFO     | architecture information:
[2025-10-12 14:15:38] 2025-10-12 18:14:51,496 | INFO     | executing command: cat /etc/os-release
[2025-10-12 14:15:38] 2025-10-12 18:14:51,511 | INFO     | cat /etc/os-release:
[2025-10-12 14:15:38] NAME="CentOS Linux"
[2025-10-12 14:15:38] VERSION="7 (Core)"
[2025-10-12 14:15:38] ID="centos"
[2025-10-12 14:15:38] ID_LIKE="rhel fedora"
[2025-10-12 14:15:38] VERSION_ID="7"
[2025-10-12 14:15:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 14:15:38] ANSI_COLOR="0;31"
[2025-10-12 14:15:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 14:15:38] HOME_URL="https://www.centos.org/"
[2025-10-12 14:15:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 14:15:38] 
[2025-10-12 14:15:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 14:15:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 14:15:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 14:15:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 14:15:38] 
[2025-10-12 14:15:38] 2025-10-12 18:14:51,511 | INFO     | ***************************************
[2025-10-12 14:15:38] 2025-10-12 18:14:52,015 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 14:15:38] 2025-10-12 18:14:52,036 | INFO     | sufficient remaining disk space (27961327616 B)
[2025-10-12 14:15:38] 2025-10-12 18:14:52,037 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 14:15:38] 2025-10-12 18:14:52,037 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 14:15:38] 2025-10-12 18:14:52,037 | INFO     | update_server=False
[2025-10-12 14:15:38] 2025-10-12 18:14:52,037 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 14:15:38] 2025-10-12 18:14:52,037 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:15:38] 2025-10-12 18:14:52,038 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:15:38] 2025-10-12 18:14:52,038 | INFO     | aborting loop
[2025-10-12 14:15:38] 2025-10-12 18:14:52,240 | INFO     | all data control threads have been joined
[2025-10-12 14:15:38] 2025-10-12 18:14:52,698 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 14:15:38] 2025-10-12 18:14:52,743 | INFO     | all payload control threads have been joined
[2025-10-12 14:15:38] 2025-10-12 18:14:52,959 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 14:15:38] 2025-10-12 18:14:53,042 | INFO     | [job] retrieve thread has finished
[2025-10-12 14:15:38] 2025-10-12 18:14:53,043 | INFO     | [job] job monitor thread has finished
[2025-10-12 14:15:38] 2025-10-12 18:14:53,043 | INFO     | [job] queue monitor thread has finished
[2025-10-12 14:15:38] 2025-10-12 18:14:53,131 | INFO     | [payload] validate_post thread has finished
[2025-10-12 14:15:38] 2025-10-12 18:14:53,245 | INFO     | [data] control thread has finished
[2025-10-12 14:15:38] 2025-10-12 18:14:53,319 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 14:15:38] 2025-10-12 18:14:53,473 | INFO     | all job control threads have been joined
[2025-10-12 14:15:38] 2025-10-12 18:14:53,690 | INFO     | [data] copytool_in thread has finished
[2025-10-12 14:15:38] 2025-10-12 18:14:53,705 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 14:15:38] 2025-10-12 18:14:53,748 | INFO     | [payload] control thread has finished
[2025-10-12 14:15:38] 2025-10-12 18:14:53,801 | INFO     | [job] validate thread has finished
[2025-10-12 14:15:38] 2025-10-12 18:14:53,802 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 14:15:38] 2025-10-12 18:14:54,005 | INFO     | [payload] failed_post thread has finished
[2025-10-12 14:15:38] 2025-10-12 18:14:54,301 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 14:15:38] 2025-10-12 18:14:54,475 | INFO     | [job] control thread has finished
[2025-10-12 14:15:38] 2025-10-12 18:14:54,964 | INFO     | [data] copytool_out thread has finished
[2025-10-12 14:15:38] 2025-10-12 18:14:56,704 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 14:15:38] 2025-10-12 18:15:23,076 | INFO     | PID=23313 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 14:15:38] 2025-10-12 18:15:23,076 | INFO     | .. there are 3 such processes running
[2025-10-12 14:15:38] 2025-10-12 18:15:23,077 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 14:15:38] 2025-10-12 18:15:23,077 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 14:15:38] 2025-10-12 18:15:23,077 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 14:15:38] 2025-10-12 18:15:32,619 | INFO     | [monitor] cgroup control has ended
[2025-10-12 14:15:38] 2025-10-12 18:15:33,030 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139679555970880)>', '<ExcThread(monitor, started 139678846023424)>']
[2025-10-12 14:15:38] 2025-10-12 18:15:33,131 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 14:15:38] 2025-10-12 18:15:33,131 | INFO     | [monitor] control thread has ended
[2025-10-12 14:15:38] 2025-10-12 18:15:38,055 | INFO     | all workflow threads have been joined
[2025-10-12 14:15:38] 2025-10-12 18:15:38,055 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 14:15:38] 2025-10-12 18:15:38,055 | INFO     | traces error code: 0
[2025-10-12 14:15:38] 2025-10-12 18:15:38,055 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 14:15:38] 2025-10-12 18:15:38,179 [wrapper] ==== pilot stdout END ====
[2025-10-12 14:15:38] 2025-10-12 18:15:38,181 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 14:15:38] 2025-10-12 18:15:38,183 [wrapper] pilotpid: 23313
[2025-10-12 14:15:38] 2025-10-12 18:15:38,185 [wrapper] Pilot exit status: 0
[2025-10-12 14:15:38] 2025-10-12 18:15:38,195 [wrapper] pandaids: 6840082163
[2025-10-12 14:15:38] 2025-10-12 18:15:38,223 [wrapper] cleanup supervisor_pilot 27402 23314
[2025-10-12 14:15:38] 2025-10-12 18:15:38,225 [wrapper] Test setup, not cleaning
[2025-10-12 14:15:38] 2025-10-12 18:15:38,227 [wrapper] apfmon messages muted
[2025-10-12 14:15:38] 2025-10-12 18:15:38,229 [wrapper] ==== wrapper stdout END ====
[2025-10-12 14:15:38] 2025-10-12 18:15:38,231 [wrapper] ==== wrapper stderr END ====
[2025-10-12 14:15:38]  *** Error codes and diagnostics ***
[2025-10-12 14:15:38]     "exeErrorCode": 0,
[2025-10-12 14:15:38]     "exeErrorDiag": "",
[2025-10-12 14:15:38]     "pilotErrorCode": 0,
[2025-10-12 14:15:38]     "pilotErrorDiag": "",
[2025-10-12 14:15:38]  *** Listing of results directory ***
[2025-10-12 14:15:38] total 412996
[2025-10-12 14:15:38] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 09:45 pilot3.tar.gz
[2025-10-12 14:15:38] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 09:48 queuedata.json
[2025-10-12 14:15:38] -rwx------ 1 boincer umatlas     36292 Oct 12 09:48 runpilot2-wrapper.sh
[2025-10-12 14:15:38] -rw-r--r-- 1 boincer umatlas       100 Oct 12 11:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 14:15:38] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 11:09 run_atlas
[2025-10-12 14:15:38] -rw-r--r-- 1 boincer umatlas       105 Oct 12 11:09 job.xml
[2025-10-12 14:15:38] -rw-r--r-- 2 boincer umatlas 221686833 Oct 12 11:09 EVNT.46676267._004041.pool.root.1
[2025-10-12 14:15:38] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 11:09 start_atlas.sh
[2025-10-12 14:15:38] drwxrwx--x 2 boincer umatlas      4096 Oct 12 11:09 shared
[2025-10-12 14:15:38] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 11:09 input.tar.gz
[2025-10-12 14:15:38] -rw-r--r-- 1 boincer umatlas         0 Oct 12 11:09 boinc_lockfile
[2025-10-12 14:15:38] -rw-r--r-- 1 boincer umatlas      2549 Oct 12 11:09 pandaJob.out
[2025-10-12 14:15:38] -rw------- 1 boincer umatlas    975528 Oct 12 11:09 agis_schedconf.cvmfs.json
[2025-10-12 14:15:38] drwx------ 5 boincer umatlas      4096 Oct 12 11:09 pilot3
[2025-10-12 14:15:38] -rw-r--r-- 1 boincer umatlas      5952 Oct 12 14:09 init_data.xml
[2025-10-12 14:15:38] -rw------- 1 boincer umatlas 193342492 Oct 12 14:14 HITS.46676269._079978.pool.root.1
[2025-10-12 14:15:38] -rw-r--r-- 1 boincer umatlas       531 Oct 12 14:14 boinc_task_state.xml
[2025-10-12 14:15:38] -rw------- 1 boincer umatlas      1054 Oct 12 14:14 memory_monitor_summary.json
[2025-10-12 14:15:38] -rw------- 1 boincer umatlas   1560580 Oct 12 14:14 agis_ddmendpoints.agis.ALL.json
[2025-10-12 14:15:38] -rw------- 1 boincer umatlas    424565 Oct 12 14:14 log.46676269._079978.job.log.tgz.1
[2025-10-12 14:15:38] -rw------- 1 boincer umatlas      7853 Oct 12 14:14 heartbeat.json
[2025-10-12 14:15:38] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 14:15 boinc_mmap_file
[2025-10-12 14:15:38] -rw-r--r-- 1 boincer umatlas        28 Oct 12 14:15 wrapper_checkpoint.txt
[2025-10-12 14:15:38] -rw------- 1 boincer umatlas        95 Oct 12 14:15 pilot_heartbeat.json
[2025-10-12 14:15:38] -rw------- 1 boincer umatlas      4821 Oct 12 14:15 pilotlog.txt
[2025-10-12 14:15:38] -rw------- 1 boincer umatlas   1565368 Oct 12 14:15 log.46676269._079978.job.log.1
[2025-10-12 14:15:38] -rw------- 1 boincer umatlas       357 Oct 12 14:15 output.list
[2025-10-12 14:15:38] -rw-r--r-- 1 boincer umatlas       620 Oct 12 14:15 runtime_log
[2025-10-12 14:15:38] -rw------- 1 boincer umatlas   2007040 Oct 12 14:15 result.tar.gz
[2025-10-12 14:15:38] -rw-r--r-- 1 boincer umatlas      8699 Oct 12 14:15 runtime_log.err
[2025-10-12 14:15:38] -rw------- 1 boincer umatlas       661 Oct 12 14:15 k7ZNDmdcBS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmF6jNDmyIY0To.diag
[2025-10-12 14:15:38] -rw-r--r-- 1 boincer umatlas     21300 Oct 12 14:15 stderr.txt
[2025-10-12 14:15:38] HITS file was successfully produced:
[2025-10-12 14:15:38] -rw------- 1 boincer umatlas 193342492 Oct 12 14:14 shared/HITS.pool.root.1
[2025-10-12 14:15:38]  *** Contents of shared directory: ***
[2025-10-12 14:15:38] total 407844
[2025-10-12 14:15:38] -rw-r--r-- 2 boincer umatlas 221686833 Oct 12 11:09 ATLAS.root_0
[2025-10-12 14:15:38] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 11:09 start_atlas.sh
[2025-10-12 14:15:38] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 11:09 input.tar.gz
[2025-10-12 14:15:38] -rw------- 1 boincer umatlas 193342492 Oct 12 14:14 HITS.pool.root.1
[2025-10-12 14:15:38] -rw------- 1 boincer umatlas   2007040 Oct 12 14:15 result.tar.gz
14:15:39 (19622): run_atlas exited; CPU time 82348.683419
14:15:39 (19622): called boinc_finish(0)

</stderr_txt>
]]>

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