Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:46:48 (9127): wrapper (7.7.26015): starting
01:46:48 (9127): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 01:46:48] Arguments: --nthreads 8
[2025-10-13 01:46:48] Threads: 8
[2025-10-13 01:46:48] Checking for CVMFS
[2025-10-13 01:46:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 01:46:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 01:46:50] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 01:46:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 01:46:51] 2.11.2.0 22933 137249 144528 151641 0 203 14167579 25165824 4585 130560 0 49749959 99.858 26914033 3166 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-13 01:46:51] CVMFS is ok
[2025-10-13 01:46:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 01:46:51] Checking for apptainer binary...
[2025-10-13 01:46:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 01:46:51] Running /usr/bin/apptainer --version
[2025-10-13 01:46:51] apptainer version 1.3.2-1.el7
[2025-10-13 01:46:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 01:46:58] cg-vwn429.simple-grid.lan
[2025-10-13 01:46:58] apptainer works
[2025-10-13 01:46:58] Set ATHENA_PROC_NUMBER=8
[2025-10-13 01:46:58] Set ATHENA_CORE_NUMBER=8
[2025-10-13 01:46:59] Starting ATLAS job with PandaID=6839822761
[2025-10-13 01:46:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 06:00:22]  *** The last 200 lines of the pilot log: ***
[2025-10-13 06:00:22] 2025-10-13 03:59:38,841 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 06:00:22] 2025-10-13 03:59:38,841 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 06:00:22] 2025-10-13 03:59:38,846 | INFO     | fitting pss+swap vs Time
[2025-10-13 06:00:22] 2025-10-13 03:59:38,847 | INFO     | sum of square deviations: 4075741535.0
[2025-10-13 06:00:22] 2025-10-13 03:59:38,849 | INFO     | sum of deviations: 84081354582.0
[2025-10-13 06:00:22] 2025-10-13 03:59:38,849 | INFO     | mean x: 1760320694.5
[2025-10-13 06:00:22] 2025-10-13 03:59:38,849 | INFO     | mean y: 2436103.372881356
[2025-10-13 06:00:22] 2025-10-13 03:59:38,849 | INFO     | -- intersect: -36312464442.02861
[2025-10-13 06:00:22] 2025-10-13 03:59:38,849 | INFO     | intersect: -36312464442.02861
[2025-10-13 06:00:22] 2025-10-13 03:59:38,850 | INFO     | chi2: 5.782181588146237
[2025-10-13 06:00:22] 2025-10-13 03:59:38,850 | INFO     | sum of square deviations: 3822136780.0
[2025-10-13 06:00:22] 2025-10-13 03:59:38,852 | INFO     | sum of deviations: 97515583685.99997
[2025-10-13 06:00:22] 2025-10-13 03:59:38,852 | INFO     | mean x: 1760320542.0
[2025-10-13 06:00:22] 2025-10-13 03:59:38,852 | INFO     | mean y: 2444021.285714286
[2025-10-13 06:00:22] 2025-10-13 03:59:38,853 | INFO     | -- intersect: -44909262442.4442
[2025-10-13 06:00:22] 2025-10-13 03:59:38,853 | INFO     | intersect: -44909262442.4442
[2025-10-13 06:00:22] 2025-10-13 03:59:38,853 | INFO     | chi2: 5.05492868280161
[2025-10-13 06:00:22] 2025-10-13 03:59:38,853 | INFO     | current chi2=5.05492868280161 (change=12.57748298385391 %)
[2025-10-13 06:00:22] 2025-10-13 03:59:38,853 | INFO     | right removable region: 230
[2025-10-13 06:00:22] 2025-10-13 03:59:38,854 | INFO     | sum of square deviations: 3822136780.0
[2025-10-13 06:00:22] 2025-10-13 03:59:38,856 | INFO     | sum of deviations: 7027503718.999981
[2025-10-13 06:00:22] 2025-10-13 03:59:38,856 | INFO     | mean x: 1760320847.0
[2025-10-13 06:00:22] 2025-10-13 03:59:38,856 | INFO     | mean y: 2482384.9004329005
[2025-10-13 06:00:22] 2025-10-13 03:59:38,856 | INFO     | -- intersect: -3234100189.448384
[2025-10-13 06:00:22] 2025-10-13 03:59:38,856 | INFO     | intersect: -3234100189.448384
[2025-10-13 06:00:22] 2025-10-13 03:59:38,857 | INFO     | chi2: 1.572796461098993
[2025-10-13 06:00:22] 2025-10-13 03:59:38,857 | INFO     | current chi2=1.572796461098993 (change=72.79925514059772 %)
[2025-10-13 06:00:22] 2025-10-13 03:59:38,857 | INFO     | sum of square deviations: 3579276412.5
[2025-10-13 06:00:22] 2025-10-13 03:59:38,859 | INFO     | sum of deviations: -19452731426.500004
[2025-10-13 06:00:22] 2025-10-13 03:59:38,859 | INFO     | mean x: 1760320999.5
[2025-10-13 06:00:22] 2025-10-13 03:59:38,859 | INFO     | mean y: 2498870.1725663715
[2025-10-13 06:00:22] 2025-10-13 03:59:38,860 | INFO     | -- intersect: 9569530773.077198
[2025-10-13 06:00:22] 2025-10-13 03:59:38,860 | INFO     | intersect: 9569530773.077198
[2025-10-13 06:00:22] 2025-10-13 03:59:38,860 | INFO     | chi2: 0.8605847065674841
[2025-10-13 06:00:22] 2025-10-13 03:59:38,860 | INFO     | current chi2=0.8605847065674841 (change=45.28314833782436 %)
[2025-10-13 06:00:22] 2025-10-13 03:59:38,861 | INFO     | sum of square deviations: 3346927870.0
[2025-10-13 06:00:22] 2025-10-13 03:59:38,862 | INFO     | sum of deviations: -16493891138.000002
[2025-10-13 06:00:22] 2025-10-13 03:59:38,863 | INFO     | mean x: 1760321152.0
[2025-10-13 06:00:22] 2025-10-13 03:59:38,863 | INFO     | mean y: 2496893.4208144797
[2025-10-13 06:00:22] 2025-10-13 03:59:38,863 | INFO     | -- intersect: 8677480812.033545
[2025-10-13 06:00:22] 2025-10-13 03:59:38,863 | INFO     | intersect: 8677480812.033545
[2025-10-13 06:00:22] 2025-10-13 03:59:38,863 | INFO     | chi2: 0.8424594074003413
[2025-10-13 06:00:22] 2025-10-13 03:59:38,863 | INFO     | current chi2=0.8424594074003413 (change=2.106160965773735 %)
[2025-10-13 06:00:22] 2025-10-13 03:59:38,864 | INFO     | left removable region: 30
[2025-10-13 06:00:22] 2025-10-13 03:59:38,864 | INFO     | sum of square deviations: 2480604650.0
[2025-10-13 06:00:22] 2025-10-13 03:59:38,865 | INFO     | sum of deviations: 4179227821.5
[2025-10-13 06:00:22] 2025-10-13 03:59:38,865 | INFO     | mean x: 1760321426.5
[2025-10-13 06:00:22] 2025-10-13 03:59:38,866 | INFO     | mean y: 2502485.625
[2025-10-13 06:00:22] 2025-10-13 03:59:38,866 | INFO     | -- intersect: -2963219714.569766
[2025-10-13 06:00:22] 2025-10-13 03:59:38,866 | INFO     | intersect: -2963219714.569766
[2025-10-13 06:00:22] 2025-10-13 03:59:38,866 | INFO     | chi2: 0.0003695458648568584
[2025-10-13 06:00:22] 2025-10-13 03:59:38,866 | INFO     | -- intersect: -2963219714.569766
[2025-10-13 06:00:22] 2025-10-13 03:59:38,866 | INFO     | current memory leak: 1.68 B/s (using 200 data points, chi2=0.00)
[2025-10-13 06:00:22] 2025-10-13 03:59:38,867 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-13 06:00:22] 2025-10-13 03:59:38,867 | INFO     | ..............................
[2025-10-13 06:00:22] 2025-10-13 03:59:38,867 | INFO     | . Timing measurements:
[2025-10-13 06:00:22] 2025-10-13 03:59:38,867 | INFO     | . get job = 0 s
[2025-10-13 06:00:22] 2025-10-13 03:59:38,868 | INFO     | . initial setup = 7 s
[2025-10-13 06:00:22] 2025-10-13 03:59:38,868 | INFO     | . payload setup = 122 s
[2025-10-13 06:00:22] 2025-10-13 03:59:38,868 | INFO     | . stage-in = 0 s
[2025-10-13 06:00:22] 2025-10-13 03:59:38,868 | INFO     | . payload execution = 14512 s
[2025-10-13 06:00:22] 2025-10-13 03:59:38,868 | INFO     | . stage-out = 3 s
[2025-10-13 06:00:22] 2025-10-13 03:59:38,868 | INFO     | . log creation = 1 s
[2025-10-13 06:00:22] 2025-10-13 03:59:38,868 | INFO     | ..............................
[2025-10-13 06:00:22] 2025-10-13 03:59:38,992 | INFO     | 
[2025-10-13 06:00:22] 2025-10-13 03:59:38,992 | INFO     | job summary report
[2025-10-13 06:00:22] 2025-10-13 03:59:38,992 | INFO     | --------------------------------------------------
[2025-10-13 06:00:22] 2025-10-13 03:59:38,993 | INFO     | PanDA job id: 6839822761
[2025-10-13 06:00:22] 2025-10-13 03:59:38,993 | INFO     | task id: 46676269
[2025-10-13 06:00:22] 2025-10-13 03:59:38,993 | INFO     | errors: (none)
[2025-10-13 06:00:22] 2025-10-13 03:59:38,993 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 06:00:22] 2025-10-13 03:59:38,993 | INFO     | pilot state: finished 
[2025-10-13 06:00:22] 2025-10-13 03:59:38,993 | INFO     | transexitcode: 0
[2025-10-13 06:00:22] 2025-10-13 03:59:38,993 | INFO     | exeerrorcode: 0
[2025-10-13 06:00:22] 2025-10-13 03:59:38,993 | INFO     | exeerrordiag: 
[2025-10-13 06:00:22] 2025-10-13 03:59:38,993 | INFO     | exitcode: 0
[2025-10-13 06:00:22] 2025-10-13 03:59:38,993 | INFO     | exitmsg: OK
[2025-10-13 06:00:22] 2025-10-13 03:59:38,993 | INFO     | cpuconsumptiontime: 54605 s
[2025-10-13 06:00:22] 2025-10-13 03:59:38,993 | INFO     | nevents: 400
[2025-10-13 06:00:22] 2025-10-13 03:59:38,994 | INFO     | neventsw: 0
[2025-10-13 06:00:22] 2025-10-13 03:59:38,994 | INFO     | pid: 19490
[2025-10-13 06:00:22] 2025-10-13 03:59:38,994 | INFO     | pgrp: 19490
[2025-10-13 06:00:22] 2025-10-13 03:59:38,994 | INFO     | corecount: 8
[2025-10-13 06:00:22] 2025-10-13 03:59:38,994 | INFO     | event service: False
[2025-10-13 06:00:22] 2025-10-13 03:59:38,994 | INFO     | sizes: {0: 2348687, 1: 2348886, 12: 2348886, 23: 2348914, 33: 2348942, 44: 2348998, 55: 2349154, 66: 2349182, 76: 2349210, 87: 2349266, 93: 2349556, 98: 2349864, 1
[2025-10-13 06:00:22] 2025-10-13 03:59:38,994 | INFO     | --------------------------------------------------
[2025-10-13 06:00:22] 2025-10-13 03:59:38,994 | INFO     | 
[2025-10-13 06:00:22] 2025-10-13 03:59:38,994 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-10-13 06:00:22] 2025-10-13 03:59:39,506 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 06:00:22] 2025-10-13 03:59:39,507 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 06:00:22] 2025-10-13 03:59:39,507 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 06:00:22] 2025-10-13 03:59:39,507 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 06:00:22] 2025-10-13 03:59:39,507 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 06:00:22] 2025-10-13 03:59:39,507 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 06:00:22] 2025-10-13 03:59:39,507 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 06:00:22] 2025-10-13 03:59:39,507 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 06:00:22] 2025-10-13 03:59:39,507 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 06:00:22] 2025-10-13 03:59:39,507 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 06:00:22] 2025-10-13 03:59:39,508 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 06:00:22] 2025-10-13 03:59:39,508 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 06:00:22] 2025-10-13 03:59:39,508 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 06:00:22] 2025-10-13 03:59:39,508 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 06:00:22] 2025-10-13 03:59:39,508 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 06:00:22] 2025-10-13 03:59:39,508 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 06:00:22] 2025-10-13 03:59:39,508 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 06:00:22] 2025-10-13 03:59:39,508 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 06:00:22] 2025-10-13 03:59:39,508 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 06:00:22] 2025-10-13 03:59:39,508 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 06:00:22] 2025-10-13 03:59:39,509 | INFO     | job 6839822761 has completed (purged errors)
[2025-10-13 06:00:22] 2025-10-13 03:59:39,509 | INFO     | overall cleanup function is called
[2025-10-13 06:00:22] 2025-10-13 03:59:40,518 | INFO     | --- collectZombieJob: --- 10, [19490]
[2025-10-13 06:00:22] 2025-10-13 03:59:40,518 | INFO     | zombie collector waiting for pid 19490
[2025-10-13 06:00:22] 2025-10-13 03:59:40,518 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 06:00:22] 2025-10-13 03:59:40,519 | INFO     | collected zombie processes
[2025-10-13 06:00:22] 2025-10-13 03:59:40,519 | INFO     | will attempt to kill all subprocesses of pid=19490
[2025-10-13 06:00:22] 2025-10-13 03:59:40,619 | INFO     | process IDs to be killed: [19490] (in reverse order)
[2025-10-13 06:00:22] 2025-10-13 03:59:41,227 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 06:00:22] 2025-10-13 03:59:41,227 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 06:00:22] 2025-10-13 03:59:41,248 | INFO     | did not find any defunct processes belonging to 19490
[2025-10-13 06:00:22] 2025-10-13 03:59:41,252 | INFO     | did not find any defunct processes belonging to 19490
[2025-10-13 06:00:22] 2025-10-13 03:59:41,252 | INFO     | ready for new job
[2025-10-13 06:00:22] 2025-10-13 03:59:41,252 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 06:00:22] 2025-10-13 03:59:41,255 | INFO     | ***************************************
[2025-10-13 06:00:22] 2025-10-13 03:59:41,255 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 06:00:22] 2025-10-13 03:59:41,255 | INFO     | ***************************************
[2025-10-13 06:00:22] 2025-10-13 03:59:41,255 | INFO     | 
[2025-10-13 06:00:22] 2025-10-13 03:59:41,256 | INFO     | pilot is running in a VM
[2025-10-13 06:00:22] 2025-10-13 03:59:41,256 | INFO     | architecture information:
[2025-10-13 06:00:22] 2025-10-13 03:59:41,264 | INFO     | executing command: cat /etc/os-release
[2025-10-13 06:00:22] 2025-10-13 03:59:41,549 | INFO     | cat /etc/os-release:
[2025-10-13 06:00:22] NAME="CentOS Linux"
[2025-10-13 06:00:22] VERSION="7 (Core)"
[2025-10-13 06:00:22] ID="centos"
[2025-10-13 06:00:22] ID_LIKE="rhel fedora"
[2025-10-13 06:00:22] VERSION_ID="7"
[2025-10-13 06:00:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 06:00:22] ANSI_COLOR="0;31"
[2025-10-13 06:00:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 06:00:22] HOME_URL="https://www.centos.org/"
[2025-10-13 06:00:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 06:00:22] 
[2025-10-13 06:00:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 06:00:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 06:00:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 06:00:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 06:00:22] 
[2025-10-13 06:00:22] 2025-10-13 03:59:41,549 | INFO     | ***************************************
[2025-10-13 06:00:22] 2025-10-13 03:59:42,052 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-10-13 06:00:22] 2025-10-13 03:59:42,271 | INFO     | sufficient remaining disk space (496018391040 B)
[2025-10-13 06:00:22] 2025-10-13 03:59:42,271 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 06:00:22] 2025-10-13 03:59:42,271 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 06:00:22] 2025-10-13 03:59:42,271 | INFO     | update_server=False
[2025-10-13 06:00:22] 2025-10-13 03:59:42,272 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 06:00:22] 2025-10-13 03:59:42,873 | INFO     | all data control threads have been joined
[2025-10-13 06:00:22] 2025-10-13 03:59:42,964 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:00:22] 2025-10-13 03:59:42,964 | INFO     | aborting loop
[2025-10-13 06:00:22] 2025-10-13 03:59:43,277 | INFO     | [job] retrieve thread has finished
[2025-10-13 06:00:22] 2025-10-13 03:59:43,357 | INFO     | [payload] validate_post thread has finished
[2025-10-13 06:00:22] 2025-10-13 03:59:43,440 | INFO     | all job control threads have been joined
[2025-10-13 06:00:22] 2025-10-13 03:59:43,500 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 06:00:22] 2025-10-13 03:59:43,629 | INFO     | all payload control threads have been joined
[2025-10-13 06:00:22] 2025-10-13 03:59:43,708 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 06:00:22] 2025-10-13 03:59:43,879 | INFO     | [data] control thread has finished
[2025-10-13 06:00:22] 2025-10-13 03:59:43,970 | INFO     | [job] job monitor thread has finished
[2025-10-13 06:00:22] 2025-10-13 03:59:44,008 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:00:22] 2025-10-13 03:59:44,306 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 06:00:22] 2025-10-13 03:59:44,307 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 06:00:22] 2025-10-13 03:59:44,446 | INFO     | [job] control thread has finished
[2025-10-13 06:00:22] 2025-10-13 03:59:44,508 | INFO     | [data] copytool_in thread has finished
[2025-10-13 06:00:22] 2025-10-13 03:59:44,635 | INFO     | [payload] control thread has finished
[2025-10-13 06:00:22] 2025-10-13 03:59:44,723 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 06:00:22] 2025-10-13 03:59:44,735 | INFO     | [job] validate thread has finished
[2025-10-13 06:00:22] 2025-10-13 03:59:44,855 | INFO     | [payload] failed_post thread has finished
[2025-10-13 06:00:22] 2025-10-13 03:59:45,014 | INFO     | [job] queue monitor thread has finished
[2025-10-13 06:00:22] 2025-10-13 03:59:45,154 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 06:00:22] 2025-10-13 03:59:45,507 | INFO     | [data] copytool_out thread has finished
[2025-10-13 06:00:22] 2025-10-13 03:59:49,162 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 06:00:22] 2025-10-13 04:00:10,849 | INFO     | [monitor] cgroup control has ended
[2025-10-13 06:00:22] 2025-10-13 04:00:11,675 | INFO     | PID=12954 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 06:00:22] 2025-10-13 04:00:11,675 | INFO     | .. there are 9 such processes running
[2025-10-13 06:00:22] 2025-10-13 04:00:11,675 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 06:00:22] 2025-10-13 04:00:11,675 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 06:00:22] 2025-10-13 04:00:11,675 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 06:00:22] 2025-10-13 04:00:12,647 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139825590355776)>', '<ExcThread(monitor, started 139824916842240)>']
[2025-10-13 06:00:22] 2025-10-13 04:00:12,681 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 06:00:22] 2025-10-13 04:00:12,681 | INFO     | [monitor] control thread has ended
[2025-10-13 06:00:22] 2025-10-13 04:00:17,673 | INFO     | all workflow threads have been joined
[2025-10-13 06:00:22] 2025-10-13 04:00:17,673 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 06:00:22] 2025-10-13 04:00:17,674 | INFO     | traces error code: 0
[2025-10-13 06:00:22] 2025-10-13 04:00:17,674 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 06:00:22] 2025-10-13 04:00:18,018 [wrapper] ==== pilot stdout END ====
[2025-10-13 06:00:22] 2025-10-13 04:00:18,129 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 06:00:22] 2025-10-13 04:00:18,179 [wrapper] pilotpid: 12954
[2025-10-13 06:00:22] 2025-10-13 04:00:18,279 [wrapper] Pilot exit status: 0
[2025-10-13 06:00:22] 2025-10-13 04:00:18,712 [wrapper] pandaids: 6839822761
[2025-10-13 06:00:22] 2025-10-13 04:00:19,476 [wrapper] cleanup supervisor_pilot 13597 12955
[2025-10-13 06:00:22] 2025-10-13 04:00:19,599 [wrapper] Test setup, not cleaning
[2025-10-13 06:00:22] 2025-10-13 04:00:19,641 [wrapper] apfmon messages muted
[2025-10-13 06:00:22] 2025-10-13 04:00:19,724 [wrapper] ==== wrapper stdout END ====
[2025-10-13 06:00:22] 2025-10-13 04:00:19,834 [wrapper] ==== wrapper stderr END ====
[2025-10-13 06:00:22]  *** Error codes and diagnostics ***
[2025-10-13 06:00:22]     "exeErrorCode": 0,
[2025-10-13 06:00:22]     "exeErrorDiag": "",
[2025-10-13 06:00:22]     "pilotErrorCode": 0,
[2025-10-13 06:00:22]     "pilotErrorDiag": "",
[2025-10-13 06:00:22]  *** Listing of results directory ***
[2025-10-13 06:00:22] total 414308
[2025-10-13 06:00:22] -rw-r--r--. 1 boinc boinc    557409 Oct 12 11:04 pilot3.tar.gz
[2025-10-13 06:00:22] -rwx------. 1 boinc boinc     36292 Oct 12 11:36 runpilot2-wrapper.sh
[2025-10-13 06:00:22] -rw-r--r--. 1 boinc boinc      5112 Oct 12 11:36 queuedata.json
[2025-10-13 06:00:22] -rw-r--r--. 1 boinc boinc       100 Oct 13 01:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 06:00:22] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 01:46 run_atlas
[2025-10-13 06:00:22] -rw-r--r--. 1 boinc boinc       105 Oct 13 01:46 job.xml
[2025-10-13 06:00:22] -rw-r--r--. 2 boinc boinc 223295139 Oct 13 01:46 EVNT.46676267._003581.pool.root.1
[2025-10-13 06:00:22] -rw-r--r--. 2 boinc boinc    569676 Oct 13 01:46 input.tar.gz
[2025-10-13 06:00:22] -rw-r--r--. 1 boinc boinc      6392 Oct 13 01:46 init_data.xml
[2025-10-13 06:00:22] -rw-r--r--. 2 boinc boinc     15120 Oct 13 01:46 start_atlas.sh
[2025-10-13 06:00:22] drwxrwx--x. 2 boinc boinc        68 Oct 13 01:46 shared
[2025-10-13 06:00:22] -rw-r--r--. 1 boinc boinc         0 Oct 13 01:46 boinc_lockfile
[2025-10-13 06:00:22] -rw-r--r--. 1 boinc boinc      2550 Oct 13 01:46 pandaJob.out
[2025-10-13 06:00:22] -rw-------. 1 boinc boinc    975603 Oct 13 01:50 agis_schedconf.cvmfs.json
[2025-10-13 06:00:22] drwx------. 5 boinc boinc      4096 Oct 13 01:50 pilot3
[2025-10-13 06:00:22] -rw-------. 1 boinc boinc 192129279 Oct 13 05:56 HITS.46676269._075373.pool.root.1
[2025-10-13 06:00:22] -rw-r--r--. 1 boinc boinc       531 Oct 13 05:57 boinc_task_state.xml
[2025-10-13 06:00:22] -rw-------. 1 boinc boinc      1013 Oct 13 05:57 memory_monitor_summary.json
[2025-10-13 06:00:22] -rw-------. 1 boinc boinc   1560580 Oct 13 05:57 agis_ddmendpoints.agis.ALL.json
[2025-10-13 06:00:22] -rw-------. 1 boinc boinc    464460 Oct 13 05:57 log.46676269._075373.job.log.tgz.1
[2025-10-13 06:00:22] -rw-------. 1 boinc boinc        95 Oct 13 05:59 pilot_heartbeat.json
[2025-10-13 06:00:22] -rw-------. 1 boinc boinc      7775 Oct 13 05:59 heartbeat.json
[2025-10-13 06:00:22] -rw-r--r--. 1 boinc boinc        28 Oct 13 05:59 wrapper_checkpoint.txt
[2025-10-13 06:00:22] -rw-r--r--. 1 boinc boinc      8192 Oct 13 05:59 boinc_mmap_file
[2025-10-13 06:00:22] -rw-------. 1 boinc boinc      4885 Oct 13 06:00 pilotlog.txt
[2025-10-13 06:00:22] -rw-------. 1 boinc boinc   2002852 Oct 13 06:00 log.46676269._075373.job.log.1
[2025-10-13 06:00:22] -rw-------. 1 boinc boinc       357 Oct 13 06:00 output.list
[2025-10-13 06:00:22] -rw-r--r--. 1 boinc boinc       620 Oct 13 06:00 runtime_log
[2025-10-13 06:00:22] -rw-------. 1 boinc boinc   2488320 Oct 13 06:00 result.tar.gz
[2025-10-13 06:00:22] -rw-r--r--. 1 boinc boinc      8717 Oct 13 06:00 runtime_log.err
[2025-10-13 06:00:22] -rw-------. 1 boinc boinc       656 Oct 13 06:00 Od2LDmlg7R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhMjNDm2ETjem.diag
[2025-10-13 06:00:22] -rw-r--r--. 1 boinc boinc     20597 Oct 13 06:00 stderr.txt
[2025-10-13 06:00:22] HITS file was successfully produced:
[2025-10-13 06:00:22] -rw-------. 1 boinc boinc 192129279 Oct 13 05:56 shared/HITS.pool.root.1
[2025-10-13 06:00:22]  *** Contents of shared directory: ***
[2025-10-13 06:00:22] total 408700
[2025-10-13 06:00:22] -rw-r--r--. 2 boinc boinc 223295139 Oct 13 01:46 ATLAS.root_0
[2025-10-13 06:00:22] -rw-r--r--. 2 boinc boinc    569676 Oct 13 01:46 input.tar.gz
[2025-10-13 06:00:22] -rw-r--r--. 2 boinc boinc     15120 Oct 13 01:46 start_atlas.sh
[2025-10-13 06:00:22] -rw-------. 1 boinc boinc 192129279 Oct 13 05:56 HITS.pool.root.1
[2025-10-13 06:00:22] -rw-------. 1 boinc boinc   2488320 Oct 13 06:00 result.tar.gz
06:00:23 (9127): run_atlas exited; CPU time 54814.443826
06:00:23 (9127): called boinc_finish(0)

</stderr_txt>
]]>

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