Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:55:30 (1079698): wrapper (7.7.26015): starting
09:55:30 (1079698): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 09:55:30] Arguments: --nthreads 4
[2025-10-13 09:55:30] Threads: 4
[2025-10-13 09:55:30] Checking for CVMFS
[2025-10-13 09:55:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 09:55:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 09:55:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 09:55:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 09:55:31] 2.9.2.0 3256619 5559 98800 151653 3 57 3563637 36864001 0 130560 0 4982541 99.992 185529 735 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 09:55:31] CVMFS is ok
[2025-10-13 09:55:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 09:55:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 09:55:31] Further information can be found at the LHC@home message board.
[2025-10-13 09:55:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 09:55:31] Checking for apptainer binary...
[2025-10-13 09:55:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 09:55:31] Running /usr/bin/apptainer --version
[2025-10-13 09:55:31] apptainer version 1.4.1-1.1
[2025-10-13 09:55:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 09:55:31] thA330
[2025-10-13 09:55:31] apptainer works
[2025-10-13 09:55:31] Set ATHENA_PROC_NUMBER=4
[2025-10-13 09:55:31] Set ATHENA_CORE_NUMBER=4
[2025-10-13 09:55:31] Starting ATLAS job with PandaID=6839866965
[2025-10-13 09:55:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 11:07:07]  *** The last 200 lines of the pilot log: ***
[2025-10-13 11:07:07] 2025-10-13 09:06:36,911 | INFO     | executing command: cat /etc/os-release
[2025-10-13 11:07:07] 2025-10-13 09:06:36,925 | INFO     | cat /etc/os-release:
[2025-10-13 11:07:07] NAME="CentOS Linux"
[2025-10-13 11:07:07] VERSION="7 (Core)"
[2025-10-13 11:07:07] ID="centos"
[2025-10-13 11:07:07] ID_LIKE="rhel fedora"
[2025-10-13 11:07:07] VERSION_ID="7"
[2025-10-13 11:07:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 11:07:07] ANSI_COLOR="0;31"
[2025-10-13 11:07:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 11:07:07] HOME_URL="https://www.centos.org/"
[2025-10-13 11:07:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 11:07:07] 
[2025-10-13 11:07:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 11:07:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 11:07:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 11:07:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 11:07:07] 
[2025-10-13 11:07:07] 2025-10-13 09:06:36,925 | INFO     | ***************************************
[2025-10-13 11:07:07] 2025-10-13 09:06:37,429 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 11:07:07] 2025-10-13 09:06:37,446 | INFO     | sufficient remaining disk space (255068209152 B)
[2025-10-13 11:07:07] 2025-10-13 09:06:37,446 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 11:07:07] 2025-10-13 09:06:37,446 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 11:07:07] 2025-10-13 09:06:37,446 | INFO     | update_server=False
[2025-10-13 11:07:07] 2025-10-13 09:06:37,446 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 11:07:07] 2025-10-13 09:06:37,446 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:07:07] 2025-10-13 09:06:37,446 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:07:07] 2025-10-13 09:06:37,447 | INFO     | aborting loop
[2025-10-13 11:07:07] 2025-10-13 09:06:37,547 | INFO     | all data control threads have been joined
[2025-10-13 11:07:07] 2025-10-13 09:06:38,246 | INFO     | all payload control threads have been joined
[2025-10-13 11:07:07] 2025-10-13 09:06:38,398 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 11:07:07] 2025-10-13 09:06:38,449 | INFO     | [job] job monitor thread has finished
[2025-10-13 11:07:07] 2025-10-13 09:06:38,451 | INFO     | [job] retrieve thread has finished
[2025-10-13 11:07:07] 2025-10-13 09:06:38,452 | INFO     | [job] queue monitor thread has finished
[2025-10-13 11:07:07] 2025-10-13 09:06:38,551 | INFO     | [data] control thread has finished
[2025-10-13 11:07:07] 2025-10-13 09:06:38,641 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 11:07:07] 2025-10-13 09:06:38,777 | INFO     | all job control threads have been joined
[2025-10-13 11:07:07] 2025-10-13 09:06:38,927 | INFO     | [payload] validate_post thread has finished
[2025-10-13 11:07:07] 2025-10-13 09:06:39,061 | INFO     | [job] validate thread has finished
[2025-10-13 11:07:07] 2025-10-13 09:06:39,179 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 11:07:07] 2025-10-13 09:06:39,252 | INFO     | [payload] control thread has finished
[2025-10-13 11:07:07] 2025-10-13 09:06:39,269 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 11:07:07] 2025-10-13 09:06:39,646 | INFO     | [payload] failed_post thread has finished
[2025-10-13 11:07:07] 2025-10-13 09:06:39,783 | INFO     | [job] control thread has finished
[2025-10-13 11:07:07] 2025-10-13 09:06:39,816 | INFO     | [data] copytool_in thread has finished
[2025-10-13 11:07:07] 2025-10-13 09:06:39,902 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 11:07:07] 2025-10-13 09:06:40,648 | INFO     | [data] copytool_out thread has finished
[2025-10-13 11:07:07] 2025-10-13 09:06:42,404 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 11:07:07] 2025-10-13 09:06:43,902 | INFO     | [monitor] cgroup control has ended
[2025-10-13 11:07:07] 2025-10-13 09:06:48,323 | INFO     | job.realtimelogging is not enabled
[2025-10-13 11:07:07] 2025-10-13 09:06:49,329 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 11:07:07] 2025-10-13 09:06:49,485 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140597426800448)>', '<ExcThread(monitor, started 140596484237056)>']
[2025-10-13 11:07:07] 2025-10-13 09:06:54,510 | INFO     | all workflow threads have been joined
[2025-10-13 11:07:07] 2025-10-13 09:06:54,510 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 11:07:07] 2025-10-13 09:06:54,511 | INFO     | traces error code: 0
[2025-10-13 11:07:07] 2025-10-13 09:06:54,511 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 11:07:07] 2025-10-13 09:07:07,158 | INFO     | PID=1083502 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 11:07:07] 2025-10-13 09:07:07,159 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 11:07:07] 2025-10-13 09:07:07,159 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 11:07:07] 2025-10-13 09:07:07,159 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 11:07:07] 2025-10-13 09:07:07,159 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 11:07:07] 2025-10-13 09:07:07,159 | INFO     | [monitor] control thread has ended
[2025-10-13 11:07:07] 2025-10-13 09:07:07,235 [wrapper] ==== pilot stdout END ====
[2025-10-13 11:07:07] 2025-10-13 09:07:07,239 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 11:07:07] 2025-10-13 09:07:07,242 [wrapper] pilotpid: 1083502
[2025-10-13 11:07:07] 2025-10-13 09:07:07,247 [wrapper] Pilot exit status: 0
[2025-10-13 11:07:07] 2025-10-13 09:07:07,258 [wrapper] pandaids: 6839866965
[2025-10-13 11:07:07] 2025-10-13 09:07:07,281 [wrapper] cleanup supervisor_pilot 1100728 1083503
[2025-10-13 11:07:07] 2025-10-13 09:07:07,285 [wrapper] Test setup, not cleaning
[2025-10-13 11:07:07] 2025-10-13 09:07:07,288 [wrapper] apfmon messages muted
[2025-10-13 11:07:07] 2025-10-13 09:07:07,292 [wrapper] ==== wrapper stdout END ====
[2025-10-13 11:07:07] 2025-10-13 09:07:07,296 [wrapper] ==== wrapper stderr END ====
[2025-10-13 11:07:07]  *** Error codes and diagnostics ***
[2025-10-13 11:07:07]     "exeErrorCode": 0,
[2025-10-13 11:07:07]     "exeErrorDiag": "",
[2025-10-13 11:07:07]     "pilotErrorCode": 0,
[2025-10-13 11:07:07]     "pilotErrorDiag": "",
[2025-10-13 11:07:07]  *** Listing of results directory ***
[2025-10-13 11:07:07] total 404980
[2025-10-13 11:07:07] -rw-r--r-- 1 boinc boinc    557409 Oct 12 12:38 pilot3.tar.gz
[2025-10-13 11:07:07] -rw-r--r-- 1 boinc boinc      5112 Oct 12 12:50 queuedata.json
[2025-10-13 11:07:07] -rwx------ 1 boinc boinc     36292 Oct 12 12:51 runpilot2-wrapper.sh
[2025-10-13 11:07:07] -rw-r--r-- 1 boinc boinc       100 Oct 13 09:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 11:07:07] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 09:55 run_atlas
[2025-10-13 11:07:07] -rw-r--r-- 1 boinc boinc       105 Oct 13 09:55 job.xml
[2025-10-13 11:07:07] -rw-r--r-- 2 boinc boinc 219947350 Oct 13 09:55 EVNT.46676267._003630.pool.root.1
[2025-10-13 11:07:07] -rw-r--r-- 2 boinc boinc    569681 Oct 13 09:55 input.tar.gz
[2025-10-13 11:07:07] -rw-r--r-- 2 boinc boinc     15120 Oct 13 09:55 start_atlas.sh
[2025-10-13 11:07:07] drwxrwx--x 2 boinc boinc      4096 Oct 13 09:55 shared
[2025-10-13 11:07:07] -rw-r--r-- 1 boinc boinc         0 Oct 13 09:55 boinc_setup_complete
[2025-10-13 11:07:07] -rw-r--r-- 1 boinc boinc      6454 Oct 13 09:55 init_data.xml
[2025-10-13 11:07:07] -rw-r--r-- 1 boinc boinc         0 Oct 13 09:55 boinc_lockfile
[2025-10-13 11:07:07] -rw-r--r-- 1 boinc boinc      2550 Oct 13 09:55 pandaJob.out
[2025-10-13 11:07:07] -rw------- 1 boinc boinc    972849 Oct 13 09:55 agis_schedconf.cvmfs.json
[2025-10-13 11:07:07] -rw------- 1 boinc boinc   1560580 Oct 13 09:55 agis_ddmendpoints.agis.ALL.json
[2025-10-13 11:07:07] drwx------ 5 boinc boinc      4096 Oct 13 09:55 pilot3
[2025-10-13 11:07:07] -rw------- 1 boinc boinc 189068215 Oct 13 11:06 HITS.46676269._076284.pool.root.1
[2025-10-13 11:07:07] -rw-r--r-- 1 boinc boinc       529 Oct 13 11:06 boinc_task_state.xml
[2025-10-13 11:07:07] -rw------- 1 boinc boinc      1022 Oct 13 11:06 memory_monitor_summary.json
[2025-10-13 11:07:07] -rw------- 1 boinc boinc    266085 Oct 13 11:06 log.46676269._076284.job.log.tgz.1
[2025-10-13 11:07:07] -rw------- 1 boinc boinc      7766 Oct 13 11:06 heartbeat.json
[2025-10-13 11:07:07] -rw-r--r-- 1 boinc boinc      8192 Oct 13 11:06 boinc_mmap_file
[2025-10-13 11:07:07] -rw-r--r-- 1 boinc boinc        27 Oct 13 11:06 wrapper_checkpoint.txt
[2025-10-13 11:07:07] -rw------- 1 boinc boinc       747 Oct 13 11:07 pilotlog.txt
[2025-10-13 11:07:07] -rw------- 1 boinc boinc        95 Oct 13 11:07 pilot_heartbeat.json
[2025-10-13 11:07:07] -rw------- 1 boinc boinc    631904 Oct 13 11:07 log.46676269._076284.job.log.1
[2025-10-13 11:07:07] -rw------- 1 boinc boinc       357 Oct 13 11:07 output.list
[2025-10-13 11:07:07] -rw-r--r-- 1 boinc boinc       620 Oct 13 11:07 runtime_log
[2025-10-13 11:07:07] -rw------- 1 boinc boinc    921600 Oct 13 11:07 result.tar.gz
[2025-10-13 11:07:07] -rw------- 1 boinc boinc       658 Oct 13 11:07 vxFLDmxq8R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmpUjNDm1Zl1Wo.diag
[2025-10-13 11:07:07] -rw-r--r-- 1 boinc boinc      8777 Oct 13 11:07 runtime_log.err
[2025-10-13 11:07:07] -rw-r--r-- 1 boinc boinc      8977 Oct 13 11:07 stderr.txt
[2025-10-13 11:07:07] HITS file was successfully produced:
[2025-10-13 11:07:07] -rw------- 1 boinc boinc 189068215 Oct 13 11:06 shared/HITS.pool.root.1
[2025-10-13 11:07:07]  *** Contents of shared directory: ***
[2025-10-13 11:07:07] total 400916
[2025-10-13 11:07:07] -rw-r--r-- 2 boinc boinc 219947350 Oct 13 09:55 ATLAS.root_0
[2025-10-13 11:07:07] -rw-r--r-- 2 boinc boinc    569681 Oct 13 09:55 input.tar.gz
[2025-10-13 11:07:07] -rw-r--r-- 2 boinc boinc     15120 Oct 13 09:55 start_atlas.sh
[2025-10-13 11:07:07] -rw------- 1 boinc boinc 189068215 Oct 13 11:06 HITS.pool.root.1
[2025-10-13 11:07:07] -rw------- 1 boinc boinc    921600 Oct 13 11:07 result.tar.gz
11:07:09 (1079698): run_atlas exited; CPU time 16004.836645
11:07:09 (1079698): called boinc_finish(0)

</stderr_txt>
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