Name oNELDmNWBS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmc0TMDm2JYRYo_0
Workunit 235926508
Created 12 Oct 2025, 13:42:40 UTC
Sent 12 Oct 2025, 14:58:49 UTC
Report deadline 20 Oct 2025, 14:58:49 UTC
Received 12 Oct 2025, 15:37:45 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 10858847
Run time 5 min 47 sec
CPU time 28 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 54.64 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 448.67 MB
Peak swap size 1.62 GB
Peak disk usage 422.67 MB

Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:31:48 (297217): wrapper (7.7.26015): starting
08:31:48 (297217): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 08:31:49] Arguments: --nthreads 12
[2025-10-12 08:31:49] Threads: 12
[2025-10-12 08:31:49] Checking for CVMFS
[2025-10-12 08:31:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 08:31:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 08:31:50] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 08:31:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 08:31:51] 2.11.5.0 2582 31640 200536 151625 3 515 31807449 45568001 23305 130560 0 343100596 99.890 117815632 8621 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-12 08:31:51] CVMFS is ok
[2025-10-12 08:31:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 08:31:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 08:31:51] Further information can be found at the LHC@home message board.
[2025-10-12 08:31:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 08:31:51] Checking for apptainer binary...
[2025-10-12 08:31:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 08:31:51] Running /usr/bin/apptainer --version
[2025-10-12 08:31:51] apptainer version 1.4.1-1.el9
[2025-10-12 08:31:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 08:31:52] wns0047.triumf.lcg
[2025-10-12 08:31:52] apptainer works
[2025-10-12 08:31:52] Set ATHENA_PROC_NUMBER=12
[2025-10-12 08:31:52] Set ATHENA_CORE_NUMBER=12
[2025-10-12 08:31:52] Starting ATLAS job with PandaID=6840081361
[2025-10-12 08:31:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 08:37:33]  *** The last 200 lines of the pilot log: ***
[2025-10-12 08:37:33] 2025-10-12 15:36:47,142 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 08:37:33] 2025-10-12 15:36:47,142 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 08:37:33] 2025-10-12 15:36:47,143 | WARNING  | wrong length of table data, x=[1760283227.0], y=[1972.0] (must be same and length>=4)
[2025-10-12 08:37:33] 2025-10-12 15:36:47,143 | INFO     | could have reported an average CPU frequency of 2673 MHz (4 samples)
[2025-10-12 08:37:33] 2025-10-12 15:36:47,143 | INFO     | ..............................
[2025-10-12 08:37:33] 2025-10-12 15:36:47,143 | INFO     | . Timing measurements:
[2025-10-12 08:37:33] 2025-10-12 15:36:47,143 | INFO     | . get job = 0 s
[2025-10-12 08:37:33] 2025-10-12 15:36:47,143 | INFO     | . initial setup = 3 s
[2025-10-12 08:37:33] 2025-10-12 15:36:47,143 | INFO     | . payload setup = 22 s
[2025-10-12 08:37:33] 2025-10-12 15:36:47,143 | INFO     | . stage-in = 0 s
[2025-10-12 08:37:33] 2025-10-12 15:36:47,143 | INFO     | . payload execution = 54 s
[2025-10-12 08:37:33] 2025-10-12 15:36:47,143 | INFO     | . stage-out = 0 s
[2025-10-12 08:37:33] 2025-10-12 15:36:47,143 | INFO     | . log creation = 0 s
[2025-10-12 08:37:33] 2025-10-12 15:36:47,143 | INFO     | ..............................
[2025-10-12 08:37:33] 2025-10-12 15:36:47,143 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 08:37:33] 2025-10-12 15:36:47,144 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6840081361/pilotlog.txt
[2025-10-12 08:37:33] 2025-10-12 15:36:47,160 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-12 08:37:33] - Log from pilotlog.txt -
[2025-10-12 08:37:33] 2025-10-12 15:36:47,141 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6840081361/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 08:37:33] 2025-10-12 15:36:47,142 | INFO     | extracted standard info from prmon json
[2025-10-12 08:37:33] 2025-10-12 15:36:47,142 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 08:37:33] 2025-10-12 15:36:47,142 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 08:37:33] 2025-10-12 15:36:47,142 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 08:37:33] 2025-10-12 15:36:47,142 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 08:37:33] 2025-10-12 15:36:47,143 | WARNING  | wrong length of table data, x=[1760283227.0], y=[1972.0] (must be same and length>=4)
[2025-10-12 08:37:33] 2025-10-12 15:36:47,143 | INFO     | could have reported an average CPU frequency of 2673 MHz (4 samples)
[2025-10-12 08:37:33] 2025-10-12 15:36:47,143 | INFO     | ..............................
[2025-10-12 08:37:33] 2025-10-12 15:36:47,143 | INFO     | . Timing measurements:
[2025-10-12 08:37:33] 2025-10-12 15:36:47,143 | INFO     | . get job = 0 s
[2025-10-12 08:37:33] 2025-10-12 15:36:47,143 | INFO     | . initial setup = 3 s
[2025-10-12 08:37:33] 2025-10-12 15:36:47,143 | INFO     | . payload setup = 22 s
[2025-10-12 08:37:33] 2025-10-12 15:36:47,143 | INFO     | . stage-in = 0 s
[2025-10-12 08:37:33] 2025-10-12 15:36:47,143 | INFO     | . payload execution = 54 s
[2025-10-12 08:37:33] 2025-10-12 15:36:47,143 | INFO     | . stage-out = 0 s
[2025-10-12 08:37:33] 2025-10-12 15:36:47,143 | INFO     | . log creation = 0 s
[2025-10-12 08:37:33] 2025-10-12 15:36:47,143 | INFO     | ..............................
[2025-10-12 08:37:33] 2025-10-12 15:36:47,143 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 08:37:33] 2025-10-12 15:36:47,144 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6840081361/pilotlog.txt
[2025-10-12 08:37:33] 2025-10-12 15:36:47,160 | WARNING  | 
[2025-10-12 08:37:33] [begin log extracts]
[2025-10-12 08:37:33] - Log from pilotlog.txt -
[2025-10-12 08:37:33] 2025-10-12 15:36:47,141 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6840081361/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 08:37:33] 2025-10-12 15:36:47,142 | INFO     | extracted standard info from prmon json
[2025-10-12 08:37:33] 2025-10-12 15:36:47,142 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 08:37:33] 2025-10-12 15:36:47,142 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 08:37:33] 2025-10-12 15:36:47,142 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 08:37:33] 2025-10-12 15:36:47,142 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 08:37:33] 2025-10-12 15:36:47,143 | WARNING  | wrong length of table data, x=[1760283227.0], y=[1972.0] (must be same and length>=4)
[2025-10-12 08:37:33] 2025-10-12 15:36:47,143 | INFO     | could have reported an average CPU frequency of 2673 MHz (4 samples)
[2025-10-12 08:37:33] 2025-10-12 15:36:47,143 | INFO     | ..............................
[2025-10-12 08:37:33] 2025-10-12 15:36:47,143 | INFO     | . Timing measurements:
[2025-10-12 08:37:33] 2025-10-12 15:36:47,143 | INFO     | . get job = 0 s
[2025-10-12 08:37:33] 2025-10-12 15:36:47,143 | INFO     | . initial setup = 3 s
[2025-10-12 08:37:33] 2025-10-12 15:36:47,143 | INFO     | . payload setup = 22 s
[2025-10-12 08:37:33] 2025-10-12 15:36:47,143 | INFO     | . stage-in = 0 s
[2025-10-12 08:37:33] 2025-10-12 15:36:47,143 | INFO     | . payload execution = 54 s
[2025-10-12 08:37:33] 2025-10-12 15:36:47,143 | INFO     | . stage-out = 0 s
[2025-10-12 08:37:33] 2025-10-12 15:36:47,143 | INFO     | . log creation = 0 s
[2025-10-12 08:37:33] 2025-10-12 15:36:47,143 | INFO     | ..............................
[2025-10-12 08:37:33] 2025-10-12 15:36:47,143 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 08:37:33] 2025-10-12 15:36:47,144 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6840081361/pilotlog.txt
[2025-10-12 08:37:33] [end log extracts]
[2025-10-12 08:37:33] 2025-10-12 15:36:47,161 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-12 08:37:33] 2025-10-12 15:36:47,161 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-12 08:37:33] 2025-10-12 15:36:47,267 | INFO     | time since job start (261s) is within the limit (172800.0s)
[2025-10-12 08:37:33] 2025-10-12 15:36:47,573 | INFO     | 
[2025-10-12 08:37:33] 2025-10-12 15:36:47,573 | INFO     | job summary report
[2025-10-12 08:37:33] 2025-10-12 15:36:47,573 | INFO     | --------------------------------------------------
[2025-10-12 08:37:33] 2025-10-12 15:36:47,573 | INFO     | PanDA job id: 6840081361
[2025-10-12 08:37:33] 2025-10-12 15:36:47,573 | INFO     | task id: 46676269
[2025-10-12 08:37:33] 2025-10-12 15:36:47,573 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-12 08:34:18,522 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-12 08:37:33] 2025-10-12 15:36:47,574 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 08:37:33] 2025-10-12 15:36:47,574 | INFO     | pilot state: failed 
[2025-10-12 08:37:33] 2025-10-12 15:36:47,574 | INFO     | transexitcode: 65
[2025-10-12 08:37:33] 2025-10-12 15:36:47,574 | INFO     | exeerrorcode: 65
[2025-10-12 08:37:33] 2025-10-12 15:36:47,574 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 08:37:33] 2025-10-12 15:36:47,574 | INFO     | exitcode: 65
[2025-10-12 08:37:33] 2025-10-12 15:36:47,574 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 08:37:33] 2025-10-12 15:36:47,574 | INFO     | cpuconsumptiontime: 18 s
[2025-10-12 08:37:33] 2025-10-12 15:36:47,574 | INFO     | nevents: 0
[2025-10-12 08:37:33] 2025-10-12 15:36:47,574 | INFO     | neventsw: 0
[2025-10-12 08:37:33] 2025-10-12 15:36:47,574 | INFO     | pid: 315852
[2025-10-12 08:37:33] 2025-10-12 15:36:47,574 | INFO     | pgrp: 315852
[2025-10-12 08:37:33] 2025-10-12 15:36:47,574 | INFO     | corecount: 12
[2025-10-12 08:37:33] 2025-10-12 15:36:47,574 | INFO     | event service: False
[2025-10-12 08:37:33] 2025-10-12 15:36:47,574 | INFO     | sizes: {0: 2348683, 1: 2348882, 12: 2348882, 16: 2349172, 23: 2349200, 81: 2372401, 82: 2372505, 84: 2376853, 88: 2376881, 220: 2377047}
[2025-10-12 08:37:33] 2025-10-12 15:36:47,574 | INFO     | --------------------------------------------------
[2025-10-12 08:37:33] 2025-10-12 15:36:47,574 | INFO     | 
[2025-10-12 08:37:33] 2025-10-12 15:36:47,574 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-12 08:37:33] 2025-10-12 15:36:47,624 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 08:37:33] 2025-10-12 15:36:47,624 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 08:37:33] 2025-10-12 15:36:47,624 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 08:37:33] 2025-10-12 15:36:47,624 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 08:37:33] 2025-10-12 15:36:47,624 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 08:37:33] 2025-10-12 15:36:47,624 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 08:37:33] 2025-10-12 15:36:47,624 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 08:37:33] 2025-10-12 15:36:47,624 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 08:37:33] 2025-10-12 15:36:47,624 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 08:37:33] 2025-10-12 15:36:47,624 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 08:37:33] 2025-10-12 15:36:47,624 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 08:37:33] 2025-10-12 15:36:47,624 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 08:37:33] 2025-10-12 15:36:47,625 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 08:37:33] 2025-10-12 15:36:47,625 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 08:37:33] 2025-10-12 15:36:47,625 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 08:37:33] 2025-10-12 15:36:47,625 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 08:37:33] 2025-10-12 15:36:47,625 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 08:37:33] 2025-10-12 15:36:47,625 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 08:37:33] 2025-10-12 15:36:47,626 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 08:37:33] 2025-10-12 15:36:47,626 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 08:37:33] 2025-10-12 15:36:47,628 | INFO     | job 6840081361 has completed (purged errors)
[2025-10-12 08:37:33] 2025-10-12 15:36:47,628 | INFO     | overall cleanup function is called
[2025-10-12 08:37:33] 2025-10-12 15:36:48,636 | INFO     | --- collectZombieJob: --- 10, [315852]
[2025-10-12 08:37:33] 2025-10-12 15:36:48,637 | INFO     | zombie collector waiting for pid 315852
[2025-10-12 08:37:33] 2025-10-12 15:36:48,637 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 08:37:33] 2025-10-12 15:36:48,637 | INFO     | collected zombie processes
[2025-10-12 08:37:33] 2025-10-12 15:36:48,637 | INFO     | will attempt to kill all subprocesses of pid=315852
[2025-10-12 08:37:33] 2025-10-12 15:36:49,481 | INFO     | process IDs to be killed: [315852] (in reverse order)
[2025-10-12 08:37:33] 2025-10-12 15:36:49,655 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 08:37:33] 2025-10-12 15:36:49,657 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 08:37:33] 2025-10-12 15:36:49,697 | INFO     | did not find any defunct processes belonging to 315852
[2025-10-12 08:37:33] 2025-10-12 15:36:49,758 | INFO     | did not find any defunct processes belonging to 315852
[2025-10-12 08:37:33] 2025-10-12 15:36:49,758 | INFO     | ready for new job
[2025-10-12 08:37:33] 2025-10-12 15:36:49,759 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 08:37:33] 2025-10-12 15:36:49,769 | INFO     | ***************************************
[2025-10-12 08:37:33] 2025-10-12 15:36:49,769 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 08:37:33] 2025-10-12 15:36:49,770 | INFO     | ***************************************
[2025-10-12 08:37:33] 2025-10-12 15:36:49,770 | INFO     | 
[2025-10-12 08:37:33] 2025-10-12 15:36:49,771 | INFO     | architecture information:
[2025-10-12 08:37:33] 2025-10-12 15:36:49,801 | INFO     | executing command: cat /etc/os-release
[2025-10-12 08:37:33] 2025-10-12 15:36:49,923 | INFO     | cat /etc/os-release:
[2025-10-12 08:37:33] NAME="CentOS Linux"
[2025-10-12 08:37:33] VERSION="7 (Core)"
[2025-10-12 08:37:33] ID="centos"
[2025-10-12 08:37:33] ID_LIKE="rhel fedora"
[2025-10-12 08:37:33] VERSION_ID="7"
[2025-10-12 08:37:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 08:37:33] ANSI_COLOR="0;31"
[2025-10-12 08:37:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 08:37:33] HOME_URL="https://www.centos.org/"
[2025-10-12 08:37:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 08:37:33] 
[2025-10-12 08:37:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 08:37:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 08:37:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 08:37:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 08:37:33] 
[2025-10-12 08:37:33] 2025-10-12 15:36:49,923 | INFO     | ***************************************
[2025-10-12 08:37:33] 2025-10-12 15:36:50,427 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-12 08:37:33] 2025-10-12 15:36:50,454 | INFO     | sufficient remaining disk space (1895551729664 B)
[2025-10-12 08:37:33] 2025-10-12 15:36:50,455 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 08:37:33] 2025-10-12 15:36:50,455 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 08:37:33] 2025-10-12 15:36:50,455 | INFO     | update_server=False
[2025-10-12 08:37:33] 2025-10-12 15:36:50,455 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 08:37:33] 2025-10-12 15:36:50,465 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 08:37:33] 2025-10-12 15:36:50,466 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:37:33] 2025-10-12 15:36:50,466 | INFO     | aborting loop
[2025-10-12 08:37:33] 2025-10-12 15:36:51,248 | INFO     | all data control threads have been joined
[2025-10-12 08:37:33] 2025-10-12 15:36:51,255 | INFO     | all job control threads have been joined
[2025-10-12 08:37:33] 2025-10-12 15:36:51,461 | INFO     | [job] retrieve thread has finished
[2025-10-12 08:37:33] 2025-10-12 15:36:51,496 | INFO     | [job] job monitor thread has finished
[2025-10-12 08:37:33] 2025-10-12 15:36:51,531 | INFO     | [payload] failed_post thread has finished
[2025-10-12 08:37:33] 2025-10-12 15:36:51,539 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 08:37:33] 2025-10-12 15:36:51,707 | INFO     | [job] validate thread has finished
[2025-10-12 08:37:33] 2025-10-12 15:36:51,914 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 08:37:33] 2025-10-12 15:36:51,968 | INFO     | all payload control threads have been joined
[2025-10-12 08:37:33] 2025-10-12 15:36:52,152 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 08:37:33] 2025-10-12 15:36:52,249 | INFO     | [payload] validate_post thread has finished
[2025-10-12 08:37:33] 2025-10-12 15:36:52,256 | INFO     | [data] control thread has finished
[2025-10-12 08:37:33] 2025-10-12 15:36:52,261 | INFO     | [job] control thread has finished
[2025-10-12 08:37:33] 2025-10-12 15:36:52,381 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 08:37:33] 2025-10-12 15:36:52,385 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:37:33] 2025-10-12 15:36:52,473 | INFO     | [data] copytool_out thread has finished
[2025-10-12 08:37:33] 2025-10-12 15:36:52,722 | INFO     | [data] copytool_in thread has finished
[2025-10-12 08:37:33] 2025-10-12 15:36:52,888 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 08:37:33] 2025-10-12 15:36:52,974 | INFO     | [payload] control thread has finished
[2025-10-12 08:37:33] 2025-10-12 15:36:53,391 | INFO     | [job] queue monitor thread has finished
[2025-10-12 08:37:33] 2025-10-12 15:36:55,549 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 08:37:33] 2025-10-12 15:37:20,602 | INFO     | PID=303054 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 08:37:33] 2025-10-12 15:37:20,602 | INFO     | .. there are 42 such processes running
[2025-10-12 08:37:33] 2025-10-12 15:37:20,602 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 08:37:33] 2025-10-12 15:37:20,602 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 08:37:33] 2025-10-12 15:37:20,602 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 08:37:33] 2025-10-12 15:37:25,887 | INFO     | [monitor] cgroup control has ended
[2025-10-12 08:37:33] 2025-10-12 15:37:26,716 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140327269893952)>', '<ExcThread(monitor, started 140326874359552)>']
[2025-10-12 08:37:33] 2025-10-12 15:37:27,644 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 08:37:33] 2025-10-12 15:37:27,644 | INFO     | [monitor] control thread has ended
[2025-10-12 08:37:33] 2025-10-12 15:37:31,742 | INFO     | all workflow threads have been joined
[2025-10-12 08:37:33] 2025-10-12 15:37:31,742 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 08:37:33] 2025-10-12 15:37:31,742 | INFO     | traces error code: 0
[2025-10-12 08:37:33] 2025-10-12 15:37:31,742 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 08:37:33] 2025-10-12 15:37:32,370 [wrapper] ==== pilot stdout END ====
[2025-10-12 08:37:33] 2025-10-12 15:37:32,372 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 08:37:33] 2025-10-12 15:37:32,374 [wrapper] pilotpid: 303054
[2025-10-12 08:37:33] 2025-10-12 15:37:32,376 [wrapper] Pilot exit status: 0
[2025-10-12 08:37:33] 2025-10-12 15:37:32,490 [wrapper] pandaids: 6840081361
[2025-10-12 08:37:33] 2025-10-12 15:37:32,931 [wrapper] cleanup supervisor_pilot  303069 303055
[2025-10-12 08:37:33] 2025-10-12 15:37:32,947 [wrapper] Test setup, not cleaning
[2025-10-12 08:37:33] 2025-10-12 15:37:32,955 [wrapper] apfmon messages muted
[2025-10-12 08:37:33] 2025-10-12 15:37:32,958 [wrapper] ==== wrapper stdout END ====
[2025-10-12 08:37:33] 2025-10-12 15:37:32,960 [wrapper] ==== wrapper stderr END ====
[2025-10-12 08:37:33]  *** Error codes and diagnostics ***
[2025-10-12 08:37:33]     "exeErrorCode": 65,
[2025-10-12 08:37:33]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 08:37:33]     "pilotErrorCode": 1305,
[2025-10-12 08:37:33]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 08:37:33]  *** Listing of results directory ***
[2025-10-12 08:37:33] total 216536
[2025-10-12 08:37:33] -rw-r--r--. 1 boinc boinc    557409 Oct 12 06:22 pilot3.tar.gz
[2025-10-12 08:37:33] -rw-r--r--. 1 boinc boinc      5112 Oct 12 06:41 queuedata.json
[2025-10-12 08:37:33] -rwx------. 1 boinc boinc     36292 Oct 12 06:42 runpilot2-wrapper.sh
[2025-10-12 08:37:33] -rw-r--r--. 1 boinc boinc       100 Oct 12 08:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 08:37:33] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 08:31 run_atlas
[2025-10-12 08:37:33] -rw-r--r--. 1 boinc boinc       105 Oct 12 08:31 job.xml
[2025-10-12 08:37:33] -rw-r--r--. 1 boinc boinc      6594 Oct 12 08:31 init_data.xml
[2025-10-12 08:37:33] -rw-r--r--. 2 boinc boinc 217596864 Oct 12 08:31 EVNT.46676267._003966.pool.root.1
[2025-10-12 08:37:33] -rw-r--r--. 2 boinc boinc     15120 Oct 12 08:31 start_atlas.sh
[2025-10-12 08:37:33] drwxrwx--x. 2 boinc boinc      4096 Oct 12 08:31 shared
[2025-10-12 08:37:33] -rw-r--r--. 2 boinc boinc    569683 Oct 12 08:31 input.tar.gz
[2025-10-12 08:37:33] -rw-r--r--. 1 boinc boinc         0 Oct 12 08:31 boinc_lockfile
[2025-10-12 08:37:33] -rw-r--r--. 1 boinc boinc      2550 Oct 12 08:31 pandaJob.out
[2025-10-12 08:37:33] -rw-------. 1 boinc boinc    975528 Oct 12 08:32 agis_schedconf.cvmfs.json
[2025-10-12 08:37:33] -rw-------. 1 boinc boinc   1560580 Oct 12 08:32 agis_ddmendpoints.agis.ALL.json
[2025-10-12 08:37:33] drwx------. 5 boinc boinc      4096 Oct 12 08:32 pilot3
[2025-10-12 08:37:33] -rw-r--r--. 1 boinc boinc       523 Oct 12 08:34 boinc_task_state.xml
[2025-10-12 08:37:33] -rw-------. 1 boinc boinc       970 Oct 12 08:34 memory_monitor_summary.json
[2025-10-12 08:37:33] -rw-------. 1 boinc boinc     22114 Oct 12 08:34 log.46676269._079729.job.log.tgz.1
[2025-10-12 08:37:33] -rw-------. 1 boinc boinc        95 Oct 12 08:36 pilot_heartbeat.json
[2025-10-12 08:37:33] -rw-------. 1 boinc boinc      8385 Oct 12 08:36 heartbeat.json
[2025-10-12 08:37:33] -rw-r--r--. 1 boinc boinc        22 Oct 12 08:37 wrapper_checkpoint.txt
[2025-10-12 08:37:33] -rw-------. 1 boinc boinc      4822 Oct 12 08:37 pilotlog.txt
[2025-10-12 08:37:33] -rw-r--r--. 1 boinc boinc      8192 Oct 12 08:37 boinc_mmap_file
[2025-10-12 08:37:33] -rw-------. 1 boinc boinc     93276 Oct 12 08:37 log.46676269._079729.job.log.1
[2025-10-12 08:37:33] -rw-------. 1 boinc boinc       188 Oct 12 08:37 output.list
[2025-10-12 08:37:33] -rw-r--r--. 1 boinc boinc       620 Oct 12 08:37 runtime_log
[2025-10-12 08:37:33] -rw-------. 1 boinc boinc    133120 Oct 12 08:37 result.tar.gz
[2025-10-12 08:37:33] -rw-r--r--. 1 boinc boinc      8528 Oct 12 08:37 runtime_log.err
[2025-10-12 08:37:33] -rw-------. 1 boinc boinc       644 Oct 12 08:37 oNELDmNWBS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmc0TMDm2JYRYo.diag
[2025-10-12 08:37:33] -rw-r--r--. 1 boinc boinc     21824 Oct 12 08:37 stderr.txt
[2025-10-12 08:37:33] No HITS result produced
[2025-10-12 08:37:33]  *** Contents of shared directory: ***
[2025-10-12 08:37:33] total 213212
[2025-10-12 08:37:33] -rw-r--r--. 2 boinc boinc 217596864 Oct 12 08:31 ATLAS.root_0
[2025-10-12 08:37:33] -rw-r--r--. 2 boinc boinc     15120 Oct 12 08:31 start_atlas.sh
[2025-10-12 08:37:33] -rw-r--r--. 2 boinc boinc    569683 Oct 12 08:31 input.tar.gz
[2025-10-12 08:37:33] -rw-------. 1 boinc boinc    133120 Oct 12 08:37 result.tar.gz
08:37:34 (297217): run_atlas exited; CPU time 28.468177
08:37:34 (297217): called boinc_finish(0)

</stderr_txt>
]]>


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