Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:57:07 (4729): wrapper (7.7.26015): starting
10:57:07 (4729): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 10:57:07] Arguments: --nthreads 8
[2025-10-12 10:57:07] Threads: 8
[2025-10-12 10:57:07] Checking for CVMFS
[2025-10-12 10:57:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 10:57:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 10:57:07] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 10:57:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 10:57:07] 2.11.2.0 3026 13959 76872 151623 0 59 13307738 20275200 1 130560 0 8939097 99.989 462325 35623 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 10:57:07] CVMFS is ok
[2025-10-12 10:57:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 10:57:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 10:57:07] Further information can be found at the LHC@home message board.
[2025-10-12 10:57:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 10:57:07] Checking for apptainer binary...
[2025-10-12 10:57:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 10:57:07] Running /usr/bin/apptainer --version
[2025-10-12 10:57:07] apptainer version 1.3.2-1.el7
[2025-10-12 10:57:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 10:57:09] c-204-25.aglt2.org
[2025-10-12 10:57:09] apptainer works
[2025-10-12 10:57:09] Set ATHENA_PROC_NUMBER=8
[2025-10-12 10:57:09] Set ATHENA_CORE_NUMBER=8
[2025-10-12 10:57:09] Starting ATLAS job with PandaID=6839822753
[2025-10-12 10:57:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 12:54:44]  *** The last 200 lines of the pilot log: ***
[2025-10-12 12:54:44] 2025-10-12 16:53:54,144 | INFO     | monitor loop #519: job 0:6839822753 is in state 'finished'
[2025-10-12 12:54:44] 2025-10-12 16:53:54,144 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 12:54:44] 2025-10-12 16:53:54,648 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 12:54:44] 2025-10-12 16:53:54,652 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-10-12 12:54:44] 2025-10-12 16:53:54,654 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839822753/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 12:54:44] 2025-10-12 16:53:54,655 | INFO     | extracted standard info from prmon json
[2025-10-12 12:54:44] 2025-10-12 16:53:54,655 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 12:54:44] 2025-10-12 16:53:54,655 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 12:54:44] 2025-10-12 16:53:54,656 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 12:54:44] 2025-10-12 16:53:54,656 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 12:54:44] 2025-10-12 16:53:54,659 | INFO     | fitting pss+swap vs Time
[2025-10-12 12:54:44] 2025-10-12 16:53:54,659 | INFO     | sum of square deviations: 459366752.5
[2025-10-12 12:54:44] 2025-10-12 16:53:54,660 | INFO     | sum of deviations: 9052232432.999998
[2025-10-12 12:54:44] 2025-10-12 16:53:54,660 | INFO     | mean x: 1760284524.5
[2025-10-12 12:54:44] 2025-10-12 16:53:54,660 | INFO     | mean y: 2505982.964912281
[2025-10-12 12:54:44] 2025-10-12 16:53:54,660 | INFO     | -- intersect: -34685473887.73085
[2025-10-12 12:54:44] 2025-10-12 16:53:54,660 | INFO     | intersect: -34685473887.73085
[2025-10-12 12:54:44] 2025-10-12 16:53:54,661 | INFO     | chi2: 1.475930294140347
[2025-10-12 12:54:44] 2025-10-12 16:53:54,661 | INFO     | sum of square deviations: 401533110.0
[2025-10-12 12:54:44] 2025-10-12 16:53:54,662 | INFO     | sum of deviations: 8653082043.999998
[2025-10-12 12:54:44] 2025-10-12 16:53:54,662 | INFO     | mean x: 1760284372.0
[2025-10-12 12:54:44] 2025-10-12 16:53:54,662 | INFO     | mean y: 2504930.2752293576
[2025-10-12 12:54:44] 2025-10-12 16:53:54,662 | INFO     | -- intersect: -37931814089.36181
[2025-10-12 12:54:44] 2025-10-12 16:53:54,662 | INFO     | intersect: -37931814089.36181
[2025-10-12 12:54:44] 2025-10-12 16:53:54,663 | INFO     | chi2: 1.478768668782435
[2025-10-12 12:54:44] 2025-10-12 16:53:54,663 | INFO     | current chi2=1.478768668782435 (change=-0.19231088713043484 %)
[2025-10-12 12:54:44] 2025-10-12 16:53:54,663 | INFO     | right removable region: 108
[2025-10-12 12:54:44] 2025-10-12 16:53:54,663 | INFO     | sum of square deviations: 401533110.0
[2025-10-12 12:54:44] 2025-10-12 16:53:54,664 | INFO     | sum of deviations: -7245387972.0
[2025-10-12 12:54:44] 2025-10-12 16:53:54,664 | INFO     | mean x: 1760284677.0
[2025-10-12 12:54:44] 2025-10-12 16:53:54,664 | INFO     | mean y: 2548045.5412844038
[2025-10-12 12:54:44] 2025-10-12 16:53:54,664 | INFO     | -- intersect: 31765670708.157337
[2025-10-12 12:54:44] 2025-10-12 16:53:54,664 | INFO     | intersect: 31765670708.157337
[2025-10-12 12:54:44] 2025-10-12 16:53:54,665 | INFO     | chi2: 0.07626372045498916
[2025-10-12 12:54:44] 2025-10-12 16:53:54,665 | INFO     | current chi2=0.07626372045498916 (change=94.83283724456588 %)
[2025-10-12 12:54:44] 2025-10-12 16:53:54,665 | INFO     | sum of square deviations: 348769330.0
[2025-10-12 12:54:44] 2025-10-12 16:53:54,666 | INFO     | sum of deviations: -3986031519.0
[2025-10-12 12:54:44] 2025-10-12 16:53:54,666 | INFO     | mean x: 1760284829.5
[2025-10-12 12:54:44] 2025-10-12 16:53:54,666 | INFO     | mean y: 2538589.3653846155
[2025-10-12 12:54:44] 2025-10-12 16:53:54,666 | INFO     | -- intersect: 20120565632.639343
[2025-10-12 12:54:44] 2025-10-12 16:53:54,666 | INFO     | intersect: 20120565632.639343
[2025-10-12 12:54:44] 2025-10-12 16:53:54,666 | INFO     | chi2: 0.059330497732417886
[2025-10-12 12:54:44] 2025-10-12 16:53:54,667 | INFO     | current chi2=0.059330497732417886 (change=22.203509901625196 %)
[2025-10-12 12:54:44] 2025-10-12 16:53:54,667 | INFO     | left removable region: 20
[2025-10-12 12:54:44] 2025-10-12 16:53:54,667 | INFO     | sum of square deviations: 211285822.0
[2025-10-12 12:54:44] 2025-10-12 16:53:54,667 | INFO     | sum of deviations: 613183407.0000001
[2025-10-12 12:54:44] 2025-10-12 16:53:54,667 | INFO     | mean x: 1760284951.5
[2025-10-12 12:54:44] 2025-10-12 16:53:54,668 | INFO     | mean y: 2523275.840909091
[2025-10-12 12:54:44] 2025-10-12 16:53:54,668 | INFO     | -- intersect: -5106089851.31724
[2025-10-12 12:54:44] 2025-10-12 16:53:54,668 | INFO     | intersect: -5106089851.31724
[2025-10-12 12:54:44] 2025-10-12 16:53:54,668 | INFO     | chi2: 0.00045188279865045406
[2025-10-12 12:54:44] 2025-10-12 16:53:54,668 | INFO     | -- intersect: -5106089851.31724
[2025-10-12 12:54:44] 2025-10-12 16:53:54,668 | INFO     | current memory leak: 2.90 B/s (using 88 data points, chi2=0.00)
[2025-10-12 12:54:44] 2025-10-12 16:53:54,669 | INFO     | could have reported an average CPU frequency of 1940 MHz (7 samples)
[2025-10-12 12:54:44] 2025-10-12 16:53:54,669 | INFO     | ..............................
[2025-10-12 12:54:44] 2025-10-12 16:53:54,669 | INFO     | . Timing measurements:
[2025-10-12 12:54:44] 2025-10-12 16:53:54,669 | INFO     | . get job = 0 s
[2025-10-12 12:54:44] 2025-10-12 16:53:54,669 | INFO     | . initial setup = 2 s
[2025-10-12 12:54:44] 2025-10-12 16:53:54,669 | INFO     | . payload setup = 8 s
[2025-10-12 12:54:44] 2025-10-12 16:53:54,669 | INFO     | . stage-in = 0 s
[2025-10-12 12:54:44] 2025-10-12 16:53:54,670 | INFO     | . payload execution = 6947 s
[2025-10-12 12:54:44] 2025-10-12 16:53:54,670 | INFO     | . stage-out = 0 s
[2025-10-12 12:54:44] 2025-10-12 16:53:54,670 | INFO     | . log creation = 0 s
[2025-10-12 12:54:44] 2025-10-12 16:53:54,670 | INFO     | ..............................
[2025-10-12 12:54:44] 2025-10-12 16:53:55,036 | INFO     | 
[2025-10-12 12:54:44] 2025-10-12 16:53:55,036 | INFO     | job summary report
[2025-10-12 12:54:44] 2025-10-12 16:53:55,037 | INFO     | --------------------------------------------------
[2025-10-12 12:54:44] 2025-10-12 16:53:55,037 | INFO     | PanDA job id: 6839822753
[2025-10-12 12:54:44] 2025-10-12 16:53:55,037 | INFO     | task id: 46676269
[2025-10-12 12:54:44] 2025-10-12 16:53:55,037 | INFO     | errors: (none)
[2025-10-12 12:54:44] 2025-10-12 16:53:55,038 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 12:54:44] 2025-10-12 16:53:55,038 | INFO     | pilot state: finished 
[2025-10-12 12:54:44] 2025-10-12 16:53:55,038 | INFO     | transexitcode: 0
[2025-10-12 12:54:44] 2025-10-12 16:53:55,038 | INFO     | exeerrorcode: 0
[2025-10-12 12:54:44] 2025-10-12 16:53:55,038 | INFO     | exeerrordiag: 
[2025-10-12 12:54:44] 2025-10-12 16:53:55,039 | INFO     | exitcode: 0
[2025-10-12 12:54:44] 2025-10-12 16:53:55,039 | INFO     | exitmsg: OK
[2025-10-12 12:54:44] 2025-10-12 16:53:55,039 | INFO     | cpuconsumptiontime: 52321 s
[2025-10-12 12:54:44] 2025-10-12 16:53:55,039 | INFO     | nevents: 400
[2025-10-12 12:54:44] 2025-10-12 16:53:55,039 | INFO     | neventsw: 0
[2025-10-12 12:54:44] 2025-10-12 16:53:55,040 | INFO     | pid: 14876
[2025-10-12 12:54:44] 2025-10-12 16:53:55,040 | INFO     | pgrp: 14876
[2025-10-12 12:54:44] 2025-10-12 16:53:55,040 | INFO     | corecount: 8
[2025-10-12 12:54:44] 2025-10-12 16:53:55,040 | INFO     | event service: False
[2025-10-12 12:54:44] 2025-10-12 16:53:55,040 | INFO     | sizes: {0: 2348686, 1: 2348885, 6: 2349147, 11: 2349175, 6959: 2376401, 6960: 2385399, 6963: 2385583, 6971: 2385777}
[2025-10-12 12:54:44] 2025-10-12 16:53:55,040 | INFO     | --------------------------------------------------
[2025-10-12 12:54:44] 2025-10-12 16:53:55,041 | INFO     | 
[2025-10-12 12:54:44] 2025-10-12 16:53:55,041 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 12:54:44] 2025-10-12 16:53:55,068 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 12:54:44] 2025-10-12 16:53:55,069 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 12:54:44] 2025-10-12 16:53:55,069 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 12:54:44] 2025-10-12 16:53:55,069 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 12:54:44] 2025-10-12 16:53:55,070 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 12:54:44] 2025-10-12 16:53:55,070 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 12:54:44] 2025-10-12 16:53:55,070 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 12:54:44] 2025-10-12 16:53:55,070 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 12:54:44] 2025-10-12 16:53:55,070 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 12:54:44] 2025-10-12 16:53:55,071 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 12:54:44] 2025-10-12 16:53:55,071 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 12:54:44] 2025-10-12 16:53:55,071 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 12:54:44] 2025-10-12 16:53:55,071 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 12:54:44] 2025-10-12 16:53:55,071 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 12:54:44] 2025-10-12 16:53:55,072 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 12:54:44] 2025-10-12 16:53:55,072 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 12:54:44] 2025-10-12 16:53:55,072 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 12:54:44] 2025-10-12 16:53:55,072 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 12:54:44] 2025-10-12 16:53:55,072 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 12:54:44] 2025-10-12 16:53:55,073 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 12:54:44] 2025-10-12 16:53:55,073 | INFO     | job 6839822753 has completed (purged errors)
[2025-10-12 12:54:44] 2025-10-12 16:53:55,073 | INFO     | overall cleanup function is called
[2025-10-12 12:54:44] 2025-10-12 16:53:55,094 | INFO     | PID=8447 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 12:54:44] 2025-10-12 16:53:56,078 | INFO     | --- collectZombieJob: --- 10, [14876]
[2025-10-12 12:54:44] 2025-10-12 16:53:56,078 | INFO     | zombie collector waiting for pid 14876
[2025-10-12 12:54:44] 2025-10-12 16:53:56,084 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 12:54:44] 2025-10-12 16:53:56,084 | INFO     | collected zombie processes
[2025-10-12 12:54:44] 2025-10-12 16:53:56,084 | INFO     | will attempt to kill all subprocesses of pid=14876
[2025-10-12 12:54:44] 2025-10-12 16:53:56,174 | INFO     | process IDs to be killed: [14876] (in reverse order)
[2025-10-12 12:54:44] 2025-10-12 16:53:56,233 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 12:54:44] 2025-10-12 16:53:56,234 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 12:54:44] 2025-10-12 16:53:56,238 | INFO     | did not find any defunct processes belonging to 14876
[2025-10-12 12:54:44] 2025-10-12 16:53:56,240 | INFO     | did not find any defunct processes belonging to 14876
[2025-10-12 12:54:44] 2025-10-12 16:53:56,241 | INFO     | ready for new job
[2025-10-12 12:54:44] 2025-10-12 16:53:56,241 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 12:54:44] 2025-10-12 16:53:56,242 | INFO     | ***************************************
[2025-10-12 12:54:44] 2025-10-12 16:53:56,243 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 12:54:44] 2025-10-12 16:53:56,243 | INFO     | ***************************************
[2025-10-12 12:54:44] 2025-10-12 16:53:56,243 | INFO     | 
[2025-10-12 12:54:44] 2025-10-12 16:53:56,243 | INFO     | architecture information:
[2025-10-12 12:54:44] 2025-10-12 16:53:56,244 | INFO     | executing command: cat /etc/os-release
[2025-10-12 12:54:44] 2025-10-12 16:53:56,263 | INFO     | cat /etc/os-release:
[2025-10-12 12:54:44] NAME="CentOS Linux"
[2025-10-12 12:54:44] VERSION="7 (Core)"
[2025-10-12 12:54:44] ID="centos"
[2025-10-12 12:54:44] ID_LIKE="rhel fedora"
[2025-10-12 12:54:44] VERSION_ID="7"
[2025-10-12 12:54:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 12:54:44] ANSI_COLOR="0;31"
[2025-10-12 12:54:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 12:54:44] HOME_URL="https://www.centos.org/"
[2025-10-12 12:54:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 12:54:44] 
[2025-10-12 12:54:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 12:54:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 12:54:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 12:54:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 12:54:44] 
[2025-10-12 12:54:44] 2025-10-12 16:53:56,264 | INFO     | ***************************************
[2025-10-12 12:54:44] 2025-10-12 16:53:56,767 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 12:54:44] 2025-10-12 16:53:56,787 | INFO     | sufficient remaining disk space (18551406592 B)
[2025-10-12 12:54:44] 2025-10-12 16:53:56,787 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 12:54:44] 2025-10-12 16:53:56,788 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 12:54:44] 2025-10-12 16:53:56,788 | INFO     | update_server=False
[2025-10-12 12:54:44] 2025-10-12 16:53:56,788 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 12:54:44] 2025-10-12 16:53:57,354 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 12:54:44] 2025-10-12 16:53:57,651 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:54:44] 2025-10-12 16:53:57,651 | INFO     | aborting loop
[2025-10-12 12:54:44] 2025-10-12 16:53:57,770 | INFO     | all data control threads have been joined
[2025-10-12 12:54:44] 2025-10-12 16:53:57,794 | INFO     | [job] retrieve thread has finished
[2025-10-12 12:54:44] 2025-10-12 16:53:57,826 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 12:54:44] 2025-10-12 16:53:57,860 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 12:54:44] 2025-10-12 16:53:57,887 | INFO     | all payload control threads have been joined
[2025-10-12 12:54:44] 2025-10-12 16:53:57,907 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 12:54:44] 2025-10-12 16:53:58,140 | INFO     | [payload] failed_post thread has finished
[2025-10-12 12:54:44] 2025-10-12 16:53:58,189 | INFO     | all job control threads have been joined
[2025-10-12 12:54:44] 2025-10-12 16:53:58,656 | INFO     | [job] job monitor thread has finished
[2025-10-12 12:54:44] 2025-10-12 16:53:58,713 | INFO     | [job] validate thread has finished
[2025-10-12 12:54:44] 2025-10-12 16:53:58,760 | INFO     | [payload] validate_post thread has finished
[2025-10-12 12:54:44] 2025-10-12 16:53:58,774 | INFO     | [data] control thread has finished
[2025-10-12 12:54:44] 2025-10-12 16:53:58,833 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 12:54:44] 2025-10-12 16:53:58,893 | INFO     | [payload] control thread has finished
[2025-10-12 12:54:44] 2025-10-12 16:53:58,963 | INFO     | [data] copytool_in thread has finished
[2025-10-12 12:54:44] 2025-10-12 16:53:59,194 | INFO     | [job] control thread has finished
[2025-10-12 12:54:44] 2025-10-12 16:53:59,358 | INFO     | [data] copytool_out thread has finished
[2025-10-12 12:54:44] 2025-10-12 16:53:59,765 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:54:44] 2025-10-12 16:54:00,770 | INFO     | [job] queue monitor thread has finished
[2025-10-12 12:54:44] 2025-10-12 16:54:01,912 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 12:54:44] 2025-10-12 16:54:06,802 | INFO     | job.realtimelogging is not enabled
[2025-10-12 12:54:44] 2025-10-12 16:54:07,807 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 12:54:44] 2025-10-12 16:54:27,313 | INFO     | PID=8447 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 12:54:44] 2025-10-12 16:54:27,313 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 12:54:44] 2025-10-12 16:54:27,313 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 12:54:44] 2025-10-12 16:54:27,314 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 12:54:44] 2025-10-12 16:54:37,857 | INFO     | [monitor] cgroup control has ended
[2025-10-12 12:54:44] 2025-10-12 16:54:38,748 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139622850639680)>', '<ExcThread(monitor, started 139622105462528)>']
[2025-10-12 12:54:44] 2025-10-12 16:54:39,365 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 12:54:44] 2025-10-12 16:54:39,366 | INFO     | [monitor] control thread has ended
[2025-10-12 12:54:44] 2025-10-12 16:54:43,750 | INFO     | all workflow threads have been joined
[2025-10-12 12:54:44] 2025-10-12 16:54:43,750 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 12:54:44] 2025-10-12 16:54:43,751 | INFO     | traces error code: 0
[2025-10-12 12:54:44] 2025-10-12 16:54:43,751 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 12:54:44] 2025-10-12 16:54:43,867 [wrapper] ==== pilot stdout END ====
[2025-10-12 12:54:44] 2025-10-12 16:54:43,872 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 12:54:44] 2025-10-12 16:54:43,877 [wrapper] pilotpid: 8447
[2025-10-12 12:54:44] 2025-10-12 16:54:43,882 [wrapper] Pilot exit status: 0
[2025-10-12 12:54:44] 2025-10-12 16:54:43,903 [wrapper] pandaids: 6839822753
[2025-10-12 12:54:44] 2025-10-12 16:54:43,952 [wrapper] cleanup supervisor_pilot 30070 8448
[2025-10-12 12:54:44] 2025-10-12 16:54:43,957 [wrapper] Test setup, not cleaning
[2025-10-12 12:54:44] 2025-10-12 16:54:43,962 [wrapper] apfmon messages muted
[2025-10-12 12:54:44] 2025-10-12 16:54:43,967 [wrapper] ==== wrapper stdout END ====
[2025-10-12 12:54:44] 2025-10-12 16:54:43,971 [wrapper] ==== wrapper stderr END ====
[2025-10-12 12:54:44]  *** Error codes and diagnostics ***
[2025-10-12 12:54:44]     "exeErrorCode": 0,
[2025-10-12 12:54:44]     "exeErrorDiag": "",
[2025-10-12 12:54:44]     "pilotErrorCode": 0,
[2025-10-12 12:54:44]     "pilotErrorDiag": "",
[2025-10-12 12:54:44]  *** Listing of results directory ***
[2025-10-12 12:54:44] total 412800
[2025-10-12 12:54:44] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 05:04 pilot3.tar.gz
[2025-10-12 12:54:44] -rwx------ 1 boincer umatlas     36292 Oct 12 05:36 runpilot2-wrapper.sh
[2025-10-12 12:54:44] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 05:36 queuedata.json
[2025-10-12 12:54:44] -rw-r--r-- 1 boincer umatlas       100 Oct 12 10:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 12:54:44] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 10:57 run_atlas
[2025-10-12 12:54:44] -rw-r--r-- 1 boincer umatlas       105 Oct 12 10:57 job.xml
[2025-10-12 12:54:44] -rw-r--r-- 2 boincer umatlas 223295139 Oct 12 10:57 EVNT.46676267._003581.pool.root.1
[2025-10-12 12:54:44] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 10:57 start_atlas.sh
[2025-10-12 12:54:44] drwxrwx--x 2 boincer umatlas      4096 Oct 12 10:57 shared
[2025-10-12 12:54:44] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 10:57 input.tar.gz
[2025-10-12 12:54:44] -rw-r--r-- 1 boincer umatlas         0 Oct 12 10:57 boinc_lockfile
[2025-10-12 12:54:44] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 10:57 pandaJob.out
[2025-10-12 12:54:44] -rw------- 1 boincer umatlas    975528 Oct 12 10:57 agis_schedconf.cvmfs.json
[2025-10-12 12:54:44] -rw------- 1 boincer umatlas   1560580 Oct 12 10:57 agis_ddmendpoints.agis.ALL.json
[2025-10-12 12:54:44] drwx------ 5 boincer umatlas      4096 Oct 12 10:57 pilot3
[2025-10-12 12:54:44] -rw-r--r-- 1 boincer umatlas       529 Oct 12 12:53 boinc_task_state.xml
[2025-10-12 12:54:44] -rw------- 1 boincer umatlas 192841650 Oct 12 12:53 HITS.46676269._075365.pool.root.1
[2025-10-12 12:54:44] -rw------- 1 boincer umatlas      1061 Oct 12 12:53 memory_monitor_summary.json
[2025-10-12 12:54:44] -rw------- 1 boincer umatlas    350257 Oct 12 12:53 log.46676269._075365.job.log.tgz.1
[2025-10-12 12:54:44] -rw------- 1 boincer umatlas      7843 Oct 12 12:53 heartbeat.json
[2025-10-12 12:54:44] -rw------- 1 boincer umatlas        95 Oct 12 12:54 pilot_heartbeat.json
[2025-10-12 12:54:44] -rw-r--r-- 1 boincer umatlas      5910 Oct 12 12:54 init_data.xml
[2025-10-12 12:54:44] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 12:54 boinc_mmap_file
[2025-10-12 12:54:44] -rw------- 1 boincer umatlas      4817 Oct 12 12:54 pilotlog.txt
[2025-10-12 12:54:44] -rw-r--r-- 1 boincer umatlas        27 Oct 12 12:54 wrapper_checkpoint.txt
[2025-10-12 12:54:44] -rw------- 1 boincer umatlas    986124 Oct 12 12:54 log.46676269._075365.job.log.1
[2025-10-12 12:54:44] -rw------- 1 boincer umatlas       357 Oct 12 12:54 output.list
[2025-10-12 12:54:44] -rw-r--r-- 1 boincer umatlas       620 Oct 12 12:54 runtime_log
[2025-10-12 12:54:44] -rw------- 1 boincer umatlas   1351680 Oct 12 12:54 result.tar.gz
[2025-10-12 12:54:44] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 12:54 runtime_log.err
[2025-10-12 12:54:44] -rw------- 1 boincer umatlas       659 Oct 12 12:54 poqLDmlg7R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZMjNDmRjODhn.diag
[2025-10-12 12:54:44] -rw-r--r-- 1 boincer umatlas     21178 Oct 12 12:54 stderr.txt
[2025-10-12 12:54:44] HITS file was successfully produced:
[2025-10-12 12:54:44] -rw------- 1 boincer umatlas 192841650 Oct 12 12:53 shared/HITS.pool.root.1
[2025-10-12 12:54:44]  *** Contents of shared directory: ***
[2025-10-12 12:54:44] total 408288
[2025-10-12 12:54:44] -rw-r--r-- 2 boincer umatlas 223295139 Oct 12 10:57 ATLAS.root_0
[2025-10-12 12:54:44] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 10:57 start_atlas.sh
[2025-10-12 12:54:44] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 10:57 input.tar.gz
[2025-10-12 12:54:44] -rw------- 1 boincer umatlas 192841650 Oct 12 12:53 HITS.pool.root.1
[2025-10-12 12:54:44] -rw------- 1 boincer umatlas   1351680 Oct 12 12:54 result.tar.gz
12:54:45 (4729): run_atlas exited; CPU time 52338.525685
12:54:45 (4729): called boinc_finish(0)

</stderr_txt>
]]>

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