Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:40:37 (23402): wrapper (7.7.26015): starting
01:40:37 (23402): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 01:40:37] Arguments: --nthreads 8
[2025-10-13 01:40:37] Threads: 8
[2025-10-13 01:40:37] Checking for CVMFS
[2025-10-13 01:40:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 01:40:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 01:40:39] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 01:40:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 01:40:40] 2.11.2.0 27084 221068 139464 151641 0 61 24901380 25165824 4632 130560 0 117606837 99.878 66627882 3212 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-13 01:40:40] CVMFS is ok
[2025-10-13 01:40:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 01:40:40] Checking for apptainer binary...
[2025-10-13 01:40:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 01:40:40] Running /usr/bin/apptainer --version
[2025-10-13 01:40:40] apptainer version 1.3.2-1.el7
[2025-10-13 01:40:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 01:40:46] cg-vwn405.simple-grid.lan
[2025-10-13 01:40:46] apptainer works
[2025-10-13 01:40:46] Set ATHENA_PROC_NUMBER=8
[2025-10-13 01:40:46] Set ATHENA_CORE_NUMBER=8
[2025-10-13 01:40:47] Starting ATLAS job with PandaID=6839928331
[2025-10-13 01:40:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:54:55]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:54:55] 2025-10-13 03:54:07,834 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 05:54:55] 2025-10-13 03:54:07,834 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 05:54:55] 2025-10-13 03:54:07,839 | INFO     | fitting pss+swap vs Time
[2025-10-13 05:54:55] 2025-10-13 03:54:07,840 | INFO     | sum of square deviations: 4127772278.0
[2025-10-13 05:54:55] 2025-10-13 03:54:07,841 | INFO     | sum of deviations: 98143778461.0
[2025-10-13 05:54:55] 2025-10-13 03:54:07,842 | INFO     | mean x: 1760320335.0
[2025-10-13 05:54:55] 2025-10-13 03:54:07,842 | INFO     | mean y: 2407866.818565401
[2025-10-13 05:54:55] 2025-10-13 03:54:07,842 | INFO     | -- intersect: -41851763667.64933
[2025-10-13 05:54:55] 2025-10-13 03:54:07,842 | INFO     | intersect: -41851763667.64933
[2025-10-13 05:54:55] 2025-10-13 03:54:07,843 | INFO     | chi2: 8.620072230081387
[2025-10-13 05:54:55] 2025-10-13 03:54:07,843 | INFO     | sum of square deviations: 3871990738.0
[2025-10-13 05:54:55] 2025-10-13 03:54:07,845 | INFO     | sum of deviations: 127570965391.5
[2025-10-13 05:54:55] 2025-10-13 03:54:07,845 | INFO     | mean x: 1760320182.5
[2025-10-13 05:54:55] 2025-10-13 03:54:07,845 | INFO     | mean y: 2425167.4698275863
[2025-10-13 05:54:55] 2025-10-13 03:54:07,845 | INFO     | -- intersect: -57995065083.672
[2025-10-13 05:54:55] 2025-10-13 03:54:07,845 | INFO     | intersect: -57995065083.672
[2025-10-13 05:54:55] 2025-10-13 03:54:07,846 | INFO     | chi2: 7.105431172397449
[2025-10-13 05:54:55] 2025-10-13 03:54:07,846 | INFO     | current chi2=7.105431172397449 (change=17.57109473396649 %)
[2025-10-13 05:54:55] 2025-10-13 03:54:07,846 | INFO     | right removable region: 231
[2025-10-13 05:54:55] 2025-10-13 03:54:07,847 | INFO     | sum of square deviations: 3871990738.0
[2025-10-13 05:54:55] 2025-10-13 03:54:07,849 | INFO     | sum of deviations: 16936988946.5
[2025-10-13 05:54:55] 2025-10-13 03:54:07,849 | INFO     | mean x: 1760320487.5
[2025-10-13 05:54:55] 2025-10-13 03:54:07,849 | INFO     | mean y: 2456250.875
[2025-10-13 05:54:55] 2025-10-13 03:54:07,849 | INFO     | -- intersect: -7697595390.902711
[2025-10-13 05:54:55] 2025-10-13 03:54:07,849 | INFO     | intersect: -7697595390.902711
[2025-10-13 05:54:55] 2025-10-13 03:54:07,850 | INFO     | chi2: 3.7551249264182474
[2025-10-13 05:54:55] 2025-10-13 03:54:07,850 | INFO     | current chi2=3.7551249264182474 (change=56.43743084525414 %)
[2025-10-13 05:54:55] 2025-10-13 03:54:07,850 | INFO     | sum of square deviations: 3627000098.0
[2025-10-13 05:54:55] 2025-10-13 03:54:07,852 | INFO     | sum of deviations: -33492935232.0
[2025-10-13 05:54:55] 2025-10-13 03:54:07,852 | INFO     | mean x: 1760320640.0
[2025-10-13 05:54:55] 2025-10-13 03:54:07,853 | INFO     | mean y: 2487511.321585903
[2025-10-13 05:54:55] 2025-10-13 03:54:07,853 | INFO     | -- intersect: 16257878630.716253
[2025-10-13 05:54:55] 2025-10-13 03:54:07,853 | INFO     | intersect: 16257878630.716253
[2025-10-13 05:54:55] 2025-10-13 03:54:07,853 | INFO     | chi2: 1.8008275705651506
[2025-10-13 05:54:55] 2025-10-13 03:54:07,853 | INFO     | current chi2=1.8008275705651506 (change=52.04347110009906 %)
[2025-10-13 05:54:55] 2025-10-13 03:54:07,854 | INFO     | sum of square deviations: 3392567795.5
[2025-10-13 05:54:55] 2025-10-13 03:54:07,855 | INFO     | sum of deviations: -36181739683.5
[2025-10-13 05:54:55] 2025-10-13 03:54:07,856 | INFO     | mean x: 1760320792.5
[2025-10-13 05:54:55] 2025-10-13 03:54:07,856 | INFO     | mean y: 2489217.0225225226
[2025-10-13 05:54:55] 2025-10-13 03:54:07,856 | INFO     | -- intersect: 18776312619.511227
[2025-10-13 05:54:55] 2025-10-13 03:54:07,856 | INFO     | intersect: 18776312619.511227
[2025-10-13 05:54:55] 2025-10-13 03:54:07,856 | INFO     | chi2: 1.7707398829920353
[2025-10-13 05:54:55] 2025-10-13 03:54:07,857 | INFO     | current chi2=1.7707398829920353 (change=1.6707700428904995 %)
[2025-10-13 05:54:55] 2025-10-13 03:54:07,857 | INFO     | left removable region: 30
[2025-10-13 05:54:55] 2025-10-13 03:54:07,857 | INFO     | sum of square deviations: 2518000700.0
[2025-10-13 05:54:55] 2025-10-13 03:54:07,858 | INFO     | sum of deviations: 7846970276.999999
[2025-10-13 05:54:55] 2025-10-13 03:54:07,859 | INFO     | mean x: 1760321067.0
[2025-10-13 05:54:55] 2025-10-13 03:54:07,859 | INFO     | mean y: 2499470.462686567
[2025-10-13 05:54:55] 2025-10-13 03:54:07,859 | INFO     | -- intersect: -5483276244.661588
[2025-10-13 05:54:55] 2025-10-13 03:54:07,859 | INFO     | intersect: -5483276244.661588
[2025-10-13 05:54:55] 2025-10-13 03:54:07,859 | INFO     | chi2: 0.000227477618037884
[2025-10-13 05:54:55] 2025-10-13 03:54:07,859 | INFO     | -- intersect: -5483276244.661588
[2025-10-13 05:54:55] 2025-10-13 03:54:07,860 | INFO     | current memory leak: 3.12 B/s (using 201 data points, chi2=0.00)
[2025-10-13 05:54:55] 2025-10-13 03:54:07,860 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-13 05:54:55] 2025-10-13 03:54:07,861 | INFO     | ..............................
[2025-10-13 05:54:55] 2025-10-13 03:54:07,861 | INFO     | . Timing measurements:
[2025-10-13 05:54:55] 2025-10-13 03:54:07,861 | INFO     | . get job = 0 s
[2025-10-13 05:54:55] 2025-10-13 03:54:07,861 | INFO     | . initial setup = 6 s
[2025-10-13 05:54:55] 2025-10-13 03:54:07,861 | INFO     | . payload setup = 127 s
[2025-10-13 05:54:55] 2025-10-13 03:54:07,861 | INFO     | . stage-in = 0 s
[2025-10-13 05:54:55] 2025-10-13 03:54:07,861 | INFO     | . payload execution = 14564 s
[2025-10-13 05:54:55] 2025-10-13 03:54:07,861 | INFO     | . stage-out = 3 s
[2025-10-13 05:54:55] 2025-10-13 03:54:07,861 | INFO     | . log creation = 1 s
[2025-10-13 05:54:55] 2025-10-13 03:54:07,862 | INFO     | ..............................
[2025-10-13 05:54:55] 2025-10-13 03:54:07,987 | INFO     | 
[2025-10-13 05:54:55] 2025-10-13 03:54:07,988 | INFO     | job summary report
[2025-10-13 05:54:55] 2025-10-13 03:54:07,988 | INFO     | --------------------------------------------------
[2025-10-13 05:54:55] 2025-10-13 03:54:07,988 | INFO     | PanDA job id: 6839928331
[2025-10-13 05:54:55] 2025-10-13 03:54:07,988 | INFO     | task id: 46676269
[2025-10-13 05:54:55] 2025-10-13 03:54:07,988 | INFO     | errors: (none)
[2025-10-13 05:54:55] 2025-10-13 03:54:07,988 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:54:55] 2025-10-13 03:54:07,988 | INFO     | pilot state: finished 
[2025-10-13 05:54:55] 2025-10-13 03:54:07,988 | INFO     | transexitcode: 0
[2025-10-13 05:54:55] 2025-10-13 03:54:07,988 | INFO     | exeerrorcode: 0
[2025-10-13 05:54:55] 2025-10-13 03:54:07,988 | INFO     | exeerrordiag: 
[2025-10-13 05:54:55] 2025-10-13 03:54:07,988 | INFO     | exitcode: 0
[2025-10-13 05:54:55] 2025-10-13 03:54:07,988 | INFO     | exitmsg: OK
[2025-10-13 05:54:55] 2025-10-13 03:54:07,989 | INFO     | cpuconsumptiontime: 53890 s
[2025-10-13 05:54:55] 2025-10-13 03:54:07,989 | INFO     | nevents: 400
[2025-10-13 05:54:55] 2025-10-13 03:54:07,989 | INFO     | neventsw: 0
[2025-10-13 05:54:55] 2025-10-13 03:54:07,989 | INFO     | pid: 1359
[2025-10-13 05:54:55] 2025-10-13 03:54:07,989 | INFO     | pgrp: 1359
[2025-10-13 05:54:55] 2025-10-13 03:54:07,989 | INFO     | corecount: 8
[2025-10-13 05:54:55] 2025-10-13 03:54:07,989 | INFO     | event service: False
[2025-10-13 05:54:55] 2025-10-13 03:54:07,989 | INFO     | sizes: {0: 2348028, 1: 2348713, 2: 2348912, 12: 2348912, 23: 2348940, 34: 2348968, 45: 2349124, 55: 2349152, 66: 2349180, 77: 2349208, 88: 2349264, 91: 2349834, 98
[2025-10-13 05:54:55] 2025-10-13 03:54:07,989 | INFO     | --------------------------------------------------
[2025-10-13 05:54:55] 2025-10-13 03:54:07,989 | INFO     | 
[2025-10-13 05:54:55] 2025-10-13 03:54:07,989 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-10-13 05:54:55] 2025-10-13 03:54:08,093 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:54:55] 2025-10-13 03:54:08,093 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:54:55] 2025-10-13 03:54:08,093 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:54:55] 2025-10-13 03:54:08,093 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:54:55] 2025-10-13 03:54:08,093 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:54:55] 2025-10-13 03:54:08,094 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:54:55] 2025-10-13 03:54:08,094 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:54:55] 2025-10-13 03:54:08,094 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:54:55] 2025-10-13 03:54:08,094 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:54:55] 2025-10-13 03:54:08,094 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:54:55] 2025-10-13 03:54:08,094 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:54:55] 2025-10-13 03:54:08,094 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:54:55] 2025-10-13 03:54:08,094 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:54:55] 2025-10-13 03:54:08,094 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:54:55] 2025-10-13 03:54:08,094 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:54:55] 2025-10-13 03:54:08,095 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:54:55] 2025-10-13 03:54:08,095 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:54:55] 2025-10-13 03:54:08,095 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:54:55] 2025-10-13 03:54:08,095 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:54:55] 2025-10-13 03:54:08,095 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:54:55] 2025-10-13 03:54:08,095 | INFO     | job 6839928331 has completed (purged errors)
[2025-10-13 05:54:55] 2025-10-13 03:54:08,095 | INFO     | overall cleanup function is called
[2025-10-13 05:54:55] 2025-10-13 03:54:09,104 | INFO     | --- collectZombieJob: --- 10, [1359]
[2025-10-13 05:54:55] 2025-10-13 03:54:09,105 | INFO     | zombie collector waiting for pid 1359
[2025-10-13 05:54:55] 2025-10-13 03:54:09,105 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:54:55] 2025-10-13 03:54:09,105 | INFO     | collected zombie processes
[2025-10-13 05:54:55] 2025-10-13 03:54:09,105 | INFO     | will attempt to kill all subprocesses of pid=1359
[2025-10-13 05:54:55] 2025-10-13 03:54:09,209 | INFO     | process IDs to be killed: [1359] (in reverse order)
[2025-10-13 05:54:55] 2025-10-13 03:54:10,005 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:54:55] 2025-10-13 03:54:10,005 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:54:55] 2025-10-13 03:54:10,009 | INFO     | did not find any defunct processes belonging to 1359
[2025-10-13 05:54:55] 2025-10-13 03:54:10,012 | INFO     | did not find any defunct processes belonging to 1359
[2025-10-13 05:54:55] 2025-10-13 03:54:10,012 | INFO     | ready for new job
[2025-10-13 05:54:55] 2025-10-13 03:54:10,013 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:54:55] 2025-10-13 03:54:10,015 | INFO     | ***************************************
[2025-10-13 05:54:55] 2025-10-13 03:54:10,015 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:54:55] 2025-10-13 03:54:10,015 | INFO     | ***************************************
[2025-10-13 05:54:55] 2025-10-13 03:54:10,015 | INFO     | 
[2025-10-13 05:54:55] 2025-10-13 03:54:10,016 | INFO     | pilot is running in a VM
[2025-10-13 05:54:55] 2025-10-13 03:54:10,016 | INFO     | architecture information:
[2025-10-13 05:54:55] 2025-10-13 03:54:10,021 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:54:55] 2025-10-13 03:54:10,280 | INFO     | cat /etc/os-release:
[2025-10-13 05:54:55] NAME="CentOS Linux"
[2025-10-13 05:54:55] VERSION="7 (Core)"
[2025-10-13 05:54:55] ID="centos"
[2025-10-13 05:54:55] ID_LIKE="rhel fedora"
[2025-10-13 05:54:55] VERSION_ID="7"
[2025-10-13 05:54:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:54:55] ANSI_COLOR="0;31"
[2025-10-13 05:54:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:54:55] HOME_URL="https://www.centos.org/"
[2025-10-13 05:54:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:54:55] 
[2025-10-13 05:54:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:54:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:54:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:54:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:54:55] 
[2025-10-13 05:54:55] 2025-10-13 03:54:10,280 | INFO     | ***************************************
[2025-10-13 05:54:55] 2025-10-13 03:54:10,784 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-10-13 05:54:55] 2025-10-13 03:54:11,038 | INFO     | sufficient remaining disk space (495447965696 B)
[2025-10-13 05:54:55] 2025-10-13 03:54:11,038 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:54:55] 2025-10-13 03:54:11,038 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:54:55] 2025-10-13 03:54:11,039 | INFO     | update_server=False
[2025-10-13 05:54:55] 2025-10-13 03:54:11,039 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:54:55] 2025-10-13 03:54:11,053 | INFO     | all job control threads have been joined
[2025-10-13 05:54:55] 2025-10-13 03:54:11,558 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:54:55] 2025-10-13 03:54:11,566 | INFO     | all data control threads have been joined
[2025-10-13 05:54:55] 2025-10-13 03:54:11,624 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:54:55] 2025-10-13 03:54:11,625 | INFO     | aborting loop
[2025-10-13 05:54:55] 2025-10-13 03:54:12,042 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:54:55] 2025-10-13 03:54:12,045 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:54:55] 2025-10-13 03:54:12,060 | INFO     | [job] control thread has finished
[2025-10-13 05:54:55] 2025-10-13 03:54:12,179 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:54:55] 2025-10-13 03:54:12,205 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:54:55] 2025-10-13 03:54:12,302 | INFO     | all payload control threads have been joined
[2025-10-13 05:54:55] 2025-10-13 03:54:12,446 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:54:55] 2025-10-13 03:54:12,572 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:54:55] 2025-10-13 03:54:12,573 | INFO     | [data] control thread has finished
[2025-10-13 05:54:55] 2025-10-13 03:54:12,630 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:54:55] 2025-10-13 03:54:12,705 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:54:55] 2025-10-13 03:54:12,976 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:54:55] 2025-10-13 03:54:13,002 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:54:55] 2025-10-13 03:54:13,252 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:54:55] 2025-10-13 03:54:13,308 | INFO     | [payload] control thread has finished
[2025-10-13 05:54:55] 2025-10-13 03:54:13,340 | INFO     | [job] validate thread has finished
[2025-10-13 05:54:55] 2025-10-13 03:54:13,566 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:54:55] 2025-10-13 03:54:14,007 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:54:55] 2025-10-13 03:54:16,051 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:54:55] 2025-10-13 03:54:39,704 | INFO     | PID=27205 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 05:54:55] 2025-10-13 03:54:39,704 | INFO     | .. there are 9 such processes running
[2025-10-13 05:54:55] 2025-10-13 03:54:39,704 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:54:55] 2025-10-13 03:54:39,704 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:54:55] 2025-10-13 03:54:39,705 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:54:55] 2025-10-13 03:54:43,902 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:54:55] 2025-10-13 03:54:45,216 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140686273140544)>', '<ExcThread(monitor, started 140685537699584)>']
[2025-10-13 05:54:55] 2025-10-13 03:54:45,740 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:54:55] 2025-10-13 03:54:45,741 | INFO     | [monitor] control thread has ended
[2025-10-13 05:54:55] 2025-10-13 03:54:50,244 | INFO     | all workflow threads have been joined
[2025-10-13 05:54:55] 2025-10-13 03:54:50,245 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:54:55] 2025-10-13 03:54:50,245 | INFO     | traces error code: 0
[2025-10-13 05:54:55] 2025-10-13 03:54:50,245 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:54:55] 2025-10-13 03:54:50,504 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:54:55] 2025-10-13 03:54:50,581 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:54:55] 2025-10-13 03:54:50,604 [wrapper] pilotpid: 27205
[2025-10-13 05:54:55] 2025-10-13 03:54:50,626 [wrapper] Pilot exit status: 0
[2025-10-13 05:54:55] 2025-10-13 03:54:50,879 [wrapper] pandaids: 6839928331
[2025-10-13 05:54:55] 2025-10-13 03:54:51,868 [wrapper] cleanup supervisor_pilot 27860 27206
[2025-10-13 05:54:55] 2025-10-13 03:54:51,974 [wrapper] Test setup, not cleaning
[2025-10-13 05:54:55] 2025-10-13 03:54:52,106 [wrapper] apfmon messages muted
[2025-10-13 05:54:55] 2025-10-13 03:54:52,230 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:54:55] 2025-10-13 03:54:52,349 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:54:55]  *** Error codes and diagnostics ***
[2025-10-13 05:54:55]     "exeErrorCode": 0,
[2025-10-13 05:54:55]     "exeErrorDiag": "",
[2025-10-13 05:54:55]     "pilotErrorCode": 0,
[2025-10-13 05:54:55]     "pilotErrorDiag": "",
[2025-10-13 05:54:55]  *** Listing of results directory ***
[2025-10-13 05:54:55] total 408580
[2025-10-13 05:54:55] -rw-r--r--. 1 boinc boinc    557409 Oct 12 13:54 pilot3.tar.gz
[2025-10-13 05:54:55] -rw-r--r--. 1 boinc boinc      5112 Oct 12 14:07 queuedata.json
[2025-10-13 05:54:55] -rwx------. 1 boinc boinc     36292 Oct 12 14:08 runpilot2-wrapper.sh
[2025-10-13 05:54:55] -rw-r--r--. 1 boinc boinc       100 Oct 13 01:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:54:55] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 01:40 run_atlas
[2025-10-13 05:54:55] -rw-r--r--. 1 boinc boinc       105 Oct 13 01:40 job.xml
[2025-10-13 05:54:55] -rw-r--r--. 1 boinc boinc      6390 Oct 13 01:40 init_data.xml
[2025-10-13 05:54:55] -rw-r--r--. 2 boinc boinc 219540933 Oct 13 01:40 EVNT.46676267._003729.pool.root.1
[2025-10-13 05:54:55] -rw-r--r--. 2 boinc boinc     15120 Oct 13 01:40 start_atlas.sh
[2025-10-13 05:54:55] drwxrwx--x. 2 boinc boinc        68 Oct 13 01:40 shared
[2025-10-13 05:54:55] -rw-r--r--. 2 boinc boinc    569678 Oct 13 01:40 input.tar.gz
[2025-10-13 05:54:55] -rw-r--r--. 1 boinc boinc         0 Oct 13 01:40 boinc_lockfile
[2025-10-13 05:54:55] -rw-r--r--. 1 boinc boinc      2549 Oct 13 01:40 pandaJob.out
[2025-10-13 05:54:55] -rw-------. 1 boinc boinc    975603 Oct 13 01:44 agis_schedconf.cvmfs.json
[2025-10-13 05:54:55] drwx------. 5 boinc boinc      4096 Oct 13 01:44 pilot3
[2025-10-13 05:54:55] -rw-------. 1 boinc boinc 190008441 Oct 13 05:50 HITS.46676269._077770.pool.root.1
[2025-10-13 05:54:55] -rw-r--r--. 1 boinc boinc       531 Oct 13 05:51 boinc_task_state.xml
[2025-10-13 05:54:55] -rw-------. 1 boinc boinc      1016 Oct 13 05:52 memory_monitor_summary.json
[2025-10-13 05:54:55] -rw-------. 1 boinc boinc   1560580 Oct 13 05:52 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:54:55] -rw-------. 1 boinc boinc    467470 Oct 13 05:52 log.46676269._077770.job.log.tgz.1
[2025-10-13 05:54:55] -rw-------. 1 boinc boinc        95 Oct 13 05:54 pilot_heartbeat.json
[2025-10-13 05:54:55] -rw-------. 1 boinc boinc      7779 Oct 13 05:54 heartbeat.json
[2025-10-13 05:54:55] -rw-r--r--. 1 boinc boinc      8192 Oct 13 05:54 boinc_mmap_file
[2025-10-13 05:54:55] -rw-r--r--. 1 boinc boinc        28 Oct 13 05:54 wrapper_checkpoint.txt
[2025-10-13 05:54:55] -rw-------. 1 boinc boinc      4884 Oct 13 05:54 pilotlog.txt
[2025-10-13 05:54:55] -rw-------. 1 boinc boinc   2005220 Oct 13 05:54 log.46676269._077770.job.log.1
[2025-10-13 05:54:55] -rw-------. 1 boinc boinc       357 Oct 13 05:54 output.list
[2025-10-13 05:54:55] -rw-r--r--. 1 boinc boinc       620 Oct 13 05:54 runtime_log
[2025-10-13 05:54:55] -rw-------. 1 boinc boinc   2488320 Oct 13 05:54 result.tar.gz
[2025-10-13 05:54:55] -rw-------. 1 boinc boinc       656 Oct 13 05:54 xQWLDm929R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4hjNDmKJhzLm.diag
[2025-10-13 05:54:55] -rw-r--r--. 1 boinc boinc      8703 Oct 13 05:54 runtime_log.err
[2025-10-13 05:54:55] -rw-r--r--. 1 boinc boinc     20581 Oct 13 05:54 stderr.txt
[2025-10-13 05:54:55] HITS file was successfully produced:
[2025-10-13 05:54:55] -rw-------. 1 boinc boinc 190008441 Oct 13 05:50 shared/HITS.pool.root.1
[2025-10-13 05:54:55]  *** Contents of shared directory: ***
[2025-10-13 05:54:55] total 402960
[2025-10-13 05:54:55] -rw-r--r--. 2 boinc boinc 219540933 Oct 13 01:40 ATLAS.root_0
[2025-10-13 05:54:55] -rw-r--r--. 2 boinc boinc     15120 Oct 13 01:40 start_atlas.sh
[2025-10-13 05:54:55] -rw-r--r--. 2 boinc boinc    569678 Oct 13 01:40 input.tar.gz
[2025-10-13 05:54:55] -rw-------. 1 boinc boinc 190008441 Oct 13 05:50 HITS.pool.root.1
[2025-10-13 05:54:55] -rw-------. 1 boinc boinc   2488320 Oct 13 05:54 result.tar.gz
05:54:57 (23402): run_atlas exited; CPU time 54098.909286
05:54:57 (23402): called boinc_finish(0)

</stderr_txt>
]]>

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