Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:53:22 (4118577): wrapper (7.7.26015): starting
16:53:22 (4118577): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 16:53:22] Arguments: --nthreads 8
[2025-10-12 16:53:22] Threads: 8
[2025-10-12 16:53:22] Checking for CVMFS
[2025-10-12 16:53:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 16:53:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 16:53:23] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 16:53:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 16:53:43] 2.13.2.0 3695926 129766 275196 151636 3 715 32838023 32935937 26754 16776704 0 216750947 99.572 251037160 29083 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 16:53:43] CVMFS is ok
[2025-10-12 16:53:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 16:53:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 16:53:43] Further information can be found at the LHC@home message board.
[2025-10-12 16:53:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:53:43] Checking for apptainer binary...
[2025-10-12 16:53:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 16:53:43] Running /usr/bin/apptainer --version
[2025-10-12 16:53:44] apptainer version 1.4.3-1.el9
[2025-10-12 16:53:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:53:45] c6-4-5-3.aglt2.org
[2025-10-12 16:53:45] apptainer works
[2025-10-12 16:53:45] Set ATHENA_PROC_NUMBER=8
[2025-10-12 16:53:45] Set ATHENA_CORE_NUMBER=8
[2025-10-12 16:53:45] Starting ATLAS job with PandaID=6839870891
[2025-10-12 16:53:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 20:08:33]  *** The last 200 lines of the pilot log: ***
[2025-10-12 20:08:33] 2025-10-13 00:07:27,225 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6839870891/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 20:08:33] 2025-10-13 00:07:27,227 | INFO     | extracted standard info from prmon json
[2025-10-12 20:08:33] 2025-10-13 00:07:27,227 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 20:08:33] 2025-10-13 00:07:27,227 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 20:08:33] 2025-10-13 00:07:27,229 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 20:08:33] 2025-10-13 00:07:27,229 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 20:08:33] 2025-10-13 00:07:27,233 | INFO     | fitting pss+swap vs Time
[2025-10-12 20:08:33] 2025-10-13 00:07:27,234 | INFO     | sum of square deviations: 2093368078.95238
[2025-10-12 20:08:33] 2025-10-13 00:07:27,235 | INFO     | sum of deviations: 11156927261.682537
[2025-10-12 20:08:33] 2025-10-13 00:07:27,235 | INFO     | mean x: 1760308217.6825397
[2025-10-12 20:08:33] 2025-10-13 00:07:27,235 | INFO     | mean y: 2177204.994708995
[2025-10-12 20:08:33] 2025-10-13 00:07:27,235 | INFO     | -- intersect: -9379656281.572412
[2025-10-12 20:08:33] 2025-10-13 00:07:27,235 | INFO     | intersect: -9379656281.572412
[2025-10-12 20:08:33] 2025-10-13 00:07:27,267 | INFO     | chi2: 2.080323141042903
[2025-10-12 20:08:33] 2025-10-13 00:07:27,267 | INFO     | sum of square deviations: 1931595650.3423827
[2025-10-12 20:08:33] 2025-10-13 00:07:27,268 | INFO     | sum of deviations: 10027220031.385868
[2025-10-12 20:08:33] 2025-10-13 00:07:27,269 | INFO     | mean x: 1760308065.1902175
[2025-10-12 20:08:33] 2025-10-13 00:07:27,269 | INFO     | mean y: 2176159.1032608696
[2025-10-12 20:08:33] 2025-10-13 00:07:27,269 | INFO     | -- intersect: -9135862793.074305
[2025-10-12 20:08:33] 2025-10-13 00:07:27,269 | INFO     | intersect: -9135862793.074305
[2025-10-12 20:08:33] 2025-10-13 00:07:27,269 | INFO     | chi2: 2.071272808560847
[2025-10-12 20:08:33] 2025-10-13 00:07:27,269 | INFO     | current chi2=2.071272808560847 (change=0.43504455166127687 %)
[2025-10-12 20:08:33] 2025-10-13 00:07:27,269 | INFO     | right removable region: 183
[2025-10-12 20:08:33] 2025-10-13 00:07:27,270 | INFO     | sum of square deviations: 1931550936.9565167
[2025-10-12 20:08:33] 2025-10-13 00:07:27,270 | INFO     | sum of deviations: -18499361659.217396
[2025-10-12 20:08:33] 2025-10-13 00:07:27,287 | INFO     | mean x: 1760308370.1956522
[2025-10-12 20:08:33] 2025-10-13 00:07:27,287 | INFO     | mean y: 2204926.9782608696
[2025-10-12 20:08:33] 2025-10-13 00:07:27,287 | INFO     | -- intersect: 16861496881.922966
[2025-10-12 20:08:33] 2025-10-13 00:07:27,287 | INFO     | intersect: 16861496881.922966
[2025-10-12 20:08:33] 2025-10-13 00:07:27,288 | INFO     | chi2: 0.43056464087953855
[2025-10-12 20:08:33] 2025-10-13 00:07:27,288 | INFO     | current chi2=0.43056464087953855 (change=79.30299229072226 %)
[2025-10-12 20:08:33] 2025-10-13 00:07:27,288 | INFO     | sum of square deviations: 1778314421.7094965
[2025-10-12 20:08:33] 2025-10-13 00:07:27,289 | INFO     | sum of deviations: -15924719533.262575
[2025-10-12 20:08:33] 2025-10-13 00:07:27,289 | INFO     | mean x: 1760308522.698324
[2025-10-12 20:08:33] 2025-10-13 00:07:27,289 | INFO     | mean y: 2202278.4581005587
[2025-10-12 20:08:33] 2025-10-13 00:07:27,289 | INFO     | -- intersect: 15765679857.99377
[2025-10-12 20:08:33] 2025-10-13 00:07:27,289 | INFO     | intersect: 15765679857.99377
[2025-10-12 20:08:33] 2025-10-13 00:07:27,287 | INFO     | time since job start (11603s) is within the limit (172800.0s)
[2025-10-12 20:08:33] 2025-10-13 00:07:27,290 | INFO     | chi2: 0.3598687294941522
[2025-10-12 20:08:33] 2025-10-13 00:07:27,309 | INFO     | current chi2=0.3598687294941522 (change=16.419349076359786 %)
[2025-10-12 20:08:33] 2025-10-13 00:07:27,309 | INFO     | left removable region: 20
[2025-10-12 20:08:33] 2025-10-13 00:07:27,309 | INFO     | sum of square deviations: 1342812475.8650258
[2025-10-12 20:08:33] 2025-10-13 00:07:27,310 | INFO     | sum of deviations: 1065074364.1595095
[2025-10-12 20:08:33] 2025-10-13 00:07:27,310 | INFO     | mean x: 1760308644.7055216
[2025-10-12 20:08:33] 2025-10-13 00:07:27,310 | INFO     | mean y: 2181573.711656442
[2025-10-12 20:08:33] 2025-10-13 00:07:27,310 | INFO     | -- intersect: -1394036918.5811386
[2025-10-12 20:08:33] 2025-10-13 00:07:27,311 | INFO     | intersect: -1394036918.5811386
[2025-10-12 20:08:33] 2025-10-13 00:07:27,311 | INFO     | chi2: 0.15196011956442262
[2025-10-12 20:08:33] 2025-10-13 00:07:27,311 | INFO     | -- intersect: -1394036918.5811386
[2025-10-12 20:08:33] 2025-10-13 00:07:27,311 | INFO     | current memory leak: 0.79 B/s (using 163 data points, chi2=0.15)
[2025-10-12 20:08:33] 2025-10-13 00:07:27,311 | INFO     | could have reported an average CPU frequency of 2904 MHz (10 samples)
[2025-10-12 20:08:33] 2025-10-13 00:07:27,312 | INFO     | ..............................
[2025-10-12 20:08:33] 2025-10-13 00:07:27,312 | INFO     | . Timing measurements:
[2025-10-12 20:08:33] 2025-10-13 00:07:27,312 | INFO     | . get job = 0 s
[2025-10-12 20:08:33] 2025-10-13 00:07:27,312 | INFO     | . initial setup = 3 s
[2025-10-12 20:08:33] 2025-10-13 00:07:27,312 | INFO     | . payload setup = 10 s
[2025-10-12 20:08:33] 2025-10-13 00:07:27,312 | INFO     | . stage-in = 0 s
[2025-10-12 20:08:33] 2025-10-13 00:07:27,312 | INFO     | . payload execution = 11523 s
[2025-10-12 20:08:33] 2025-10-13 00:07:27,312 | INFO     | . stage-out = 5 s
[2025-10-12 20:08:33] 2025-10-13 00:07:27,312 | INFO     | . log creation = 0 s
[2025-10-12 20:08:33] 2025-10-13 00:07:27,312 | INFO     | ..............................
[2025-10-12 20:08:33] 2025-10-13 00:07:27,669 | INFO     | 
[2025-10-12 20:08:33] 2025-10-13 00:07:27,669 | INFO     | job summary report
[2025-10-12 20:08:33] 2025-10-13 00:07:27,669 | INFO     | --------------------------------------------------
[2025-10-12 20:08:33] 2025-10-13 00:07:27,669 | INFO     | PanDA job id: 6839870891
[2025-10-12 20:08:33] 2025-10-13 00:07:27,669 | INFO     | task id: 46676269
[2025-10-12 20:08:33] 2025-10-13 00:07:27,669 | INFO     | errors: (none)
[2025-10-12 20:08:33] 2025-10-13 00:07:27,669 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 20:08:33] 2025-10-13 00:07:27,669 | INFO     | pilot state: finished 
[2025-10-12 20:08:33] 2025-10-13 00:07:27,669 | INFO     | transexitcode: 0
[2025-10-12 20:08:33] 2025-10-13 00:07:27,669 | INFO     | exeerrorcode: 0
[2025-10-12 20:08:33] 2025-10-13 00:07:27,670 | INFO     | exeerrordiag: 
[2025-10-12 20:08:33] 2025-10-13 00:07:27,670 | INFO     | exitcode: 0
[2025-10-12 20:08:33] 2025-10-13 00:07:27,670 | INFO     | exitmsg: OK
[2025-10-12 20:08:33] 2025-10-13 00:07:27,670 | INFO     | cpuconsumptiontime: 39001 s
[2025-10-12 20:08:33] 2025-10-13 00:07:27,670 | INFO     | nevents: 400
[2025-10-12 20:08:33] 2025-10-13 00:07:27,670 | INFO     | neventsw: 0
[2025-10-12 20:08:33] 2025-10-13 00:07:27,670 | INFO     | pid: 4134312
[2025-10-12 20:08:33] 2025-10-13 00:07:27,670 | INFO     | pgrp: 4134312
[2025-10-12 20:08:33] 2025-10-13 00:07:27,670 | INFO     | corecount: 8
[2025-10-12 20:08:33] 2025-10-13 00:07:27,670 | INFO     | event service: False
[2025-10-12 20:08:33] 2025-10-13 00:07:27,670 | INFO     | sizes: {0: 2348686, 1: 2348885, 8: 2349147, 11: 2349175, 11538: 2378518, 11539: 2378517, 11545: 2387699, 11548: 2387755, 11583: 2387949}
[2025-10-12 20:08:33] 2025-10-13 00:07:27,670 | INFO     | --------------------------------------------------
[2025-10-12 20:08:33] 2025-10-13 00:07:27,670 | INFO     | 
[2025-10-12 20:08:33] 2025-10-13 00:07:27,670 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 20:08:33] 2025-10-13 00:07:27,779 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 20:08:33] 2025-10-13 00:07:27,779 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 20:08:33] 2025-10-13 00:07:27,779 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 20:08:33] 2025-10-13 00:07:27,780 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 20:08:33] 2025-10-13 00:07:27,780 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 20:08:33] 2025-10-13 00:07:27,780 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 20:08:33] 2025-10-13 00:07:27,780 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 20:08:33] 2025-10-13 00:07:27,780 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 20:08:33] 2025-10-13 00:07:27,780 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 20:08:33] 2025-10-13 00:07:27,780 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 20:08:33] 2025-10-13 00:07:27,780 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 20:08:33] 2025-10-13 00:07:27,780 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 20:08:33] 2025-10-13 00:07:27,780 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 20:08:33] 2025-10-13 00:07:27,780 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 20:08:33] 2025-10-13 00:07:27,780 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 20:08:33] 2025-10-13 00:07:27,780 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 20:08:33] 2025-10-13 00:07:27,780 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 20:08:33] 2025-10-13 00:07:27,781 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 20:08:33] 2025-10-13 00:07:27,781 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 20:08:33] 2025-10-13 00:07:27,781 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 20:08:33] 2025-10-13 00:07:27,781 | INFO     | job 6839870891 has completed (purged errors)
[2025-10-12 20:08:33] 2025-10-13 00:07:27,781 | INFO     | overall cleanup function is called
[2025-10-12 20:08:33] 2025-10-13 00:07:28,790 | INFO     | --- collectZombieJob: --- 10, [4134312]
[2025-10-12 20:08:33] 2025-10-13 00:07:28,790 | INFO     | zombie collector waiting for pid 4134312
[2025-10-12 20:08:33] 2025-10-13 00:07:28,790 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 20:08:33] 2025-10-13 00:07:28,790 | INFO     | collected zombie processes
[2025-10-12 20:08:33] 2025-10-13 00:07:28,790 | INFO     | will attempt to kill all subprocesses of pid=4134312
[2025-10-12 20:08:33] 2025-10-13 00:07:30,740 | INFO     | PID=4127721 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 20:08:33] 2025-10-13 00:07:30,754 | INFO     | .. there are 33 such processes running
[2025-10-12 20:08:33] 2025-10-13 00:07:31,155 | INFO     | process IDs to be killed: [4134312] (in reverse order)
[2025-10-12 20:08:33] 2025-10-13 00:07:31,300 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 20:08:33] 2025-10-13 00:07:31,301 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 20:08:33] 2025-10-13 00:07:31,412 | INFO     | did not find any defunct processes belonging to 4134312
[2025-10-12 20:08:33] 2025-10-13 00:07:31,503 | INFO     | did not find any defunct processes belonging to 4134312
[2025-10-12 20:08:33] 2025-10-13 00:07:31,504 | INFO     | ready for new job
[2025-10-12 20:08:33] 2025-10-13 00:07:31,535 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 20:08:33] 2025-10-13 00:07:31,537 | INFO     | ***************************************
[2025-10-12 20:08:33] 2025-10-13 00:07:31,537 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 20:08:33] 2025-10-13 00:07:31,537 | INFO     | ***************************************
[2025-10-12 20:08:33] 2025-10-13 00:07:31,537 | INFO     | 
[2025-10-12 20:08:33] 2025-10-13 00:07:31,561 | INFO     | architecture information:
[2025-10-12 20:08:33] 2025-10-13 00:07:31,593 | INFO     | executing command: cat /etc/os-release
[2025-10-12 20:08:33] 2025-10-13 00:07:31,673 | INFO     | cat /etc/os-release:
[2025-10-12 20:08:33] NAME="CentOS Linux"
[2025-10-12 20:08:33] VERSION="7 (Core)"
[2025-10-12 20:08:33] ID="centos"
[2025-10-12 20:08:33] ID_LIKE="rhel fedora"
[2025-10-12 20:08:33] VERSION_ID="7"
[2025-10-12 20:08:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 20:08:33] ANSI_COLOR="0;31"
[2025-10-12 20:08:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 20:08:33] HOME_URL="https://www.centos.org/"
[2025-10-12 20:08:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 20:08:33] 
[2025-10-12 20:08:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 20:08:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 20:08:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 20:08:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 20:08:33] 
[2025-10-12 20:08:33] 2025-10-13 00:07:31,673 | INFO     | ***************************************
[2025-10-12 20:08:33] 2025-10-13 00:07:32,177 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 20:08:33] 2025-10-13 00:07:32,325 | INFO     | sufficient remaining disk space (75289853952 B)
[2025-10-12 20:08:33] 2025-10-13 00:07:32,330 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 20:08:33] 2025-10-13 00:07:32,330 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 20:08:33] 2025-10-13 00:07:32,330 | INFO     | update_server=False
[2025-10-12 20:08:33] 2025-10-13 00:07:32,330 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 20:08:33] 2025-10-13 00:07:32,655 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:08:33] 2025-10-13 00:07:32,740 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 20:08:33] 2025-10-13 00:07:32,740 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 20:08:33] 2025-10-13 00:07:32,740 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:08:33] 2025-10-13 00:07:32,740 | INFO     | will abort loop
[2025-10-12 20:08:33] 2025-10-13 00:07:32,782 | INFO     | all data control threads have been joined
[2025-10-12 20:08:33] 2025-10-13 00:07:32,883 | INFO     | all job control threads have been joined
[2025-10-12 20:08:33] 2025-10-13 00:07:33,344 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 20:08:33] 2025-10-13 00:07:33,345 | INFO     | [job] retrieve thread has finished
[2025-10-12 20:08:33] 2025-10-13 00:07:33,661 | INFO     | [job] queue monitor thread has finished
[2025-10-12 20:08:33] 2025-10-13 00:07:33,682 | INFO     | all payload control threads have been joined
[2025-10-12 20:08:33] 2025-10-13 00:07:33,687 | INFO     | [payload] failed_post thread has finished
[2025-10-12 20:08:33] 2025-10-13 00:07:33,746 | INFO     | [job] job monitor thread has finished
[2025-10-12 20:08:33] 2025-10-13 00:07:33,788 | INFO     | [data] control thread has finished
[2025-10-12 20:08:33] 2025-10-13 00:07:33,889 | INFO     | [job] control thread has finished
[2025-10-12 20:08:33] 2025-10-13 00:07:34,275 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 20:08:33] 2025-10-13 00:07:34,275 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 20:08:33] 2025-10-13 00:07:34,276 | INFO     | [job] validate thread has finished
[2025-10-12 20:08:33] 2025-10-13 00:07:34,364 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 20:08:33] 2025-10-13 00:07:34,542 | INFO     | [data] copytool_in thread has finished
[2025-10-12 20:08:33] 2025-10-13 00:07:34,542 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 20:08:33] 2025-10-13 00:07:34,567 | INFO     | [payload] validate_post thread has finished
[2025-10-12 20:08:33] 2025-10-13 00:07:34,688 | INFO     | [payload] control thread has finished
[2025-10-12 20:08:33] 2025-10-13 00:07:34,761 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 20:08:33] 2025-10-13 00:07:35,351 | INFO     | [data] copytool_out thread has finished
[2025-10-12 20:08:33] 2025-10-13 00:07:38,770 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 20:08:33] 2025-10-13 00:08:04,355 | INFO     | PID=4127721 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 20:08:33] 2025-10-13 00:08:04,356 | INFO     | .. there are 33 such processes running
[2025-10-12 20:08:33] 2025-10-13 00:08:04,364 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 20:08:33] 2025-10-13 00:08:04,364 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 20:08:33] 2025-10-13 00:08:04,364 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 20:08:33] 2025-10-13 00:08:24,858 | INFO     | [monitor] cgroup control has ended
[2025-10-12 20:08:33] 2025-10-13 00:08:25,657 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140129401128768)>', '<ExcThread(monitor, started 140129037428480)>']
[2025-10-12 20:08:33] 2025-10-13 00:08:26,568 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 20:08:33] 2025-10-13 00:08:26,568 | INFO     | [monitor] control thread has ended
[2025-10-12 20:08:33] 2025-10-13 00:08:30,683 | INFO     | all workflow threads have been joined
[2025-10-12 20:08:33] 2025-10-13 00:08:30,683 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 20:08:33] 2025-10-13 00:08:30,683 | INFO     | traces error code: 0
[2025-10-12 20:08:33] 2025-10-13 00:08:30,683 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 20:08:33] 2025-10-13 00:08:31,235 [wrapper] ==== pilot stdout END ====
[2025-10-12 20:08:33] 2025-10-13 00:08:31,263 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 20:08:33] 2025-10-13 00:08:31,276 [wrapper] pilotpid: 4127721
[2025-10-12 20:08:33] 2025-10-13 00:08:31,307 [wrapper] Pilot exit status: 0
[2025-10-12 20:08:33] 2025-10-13 00:08:31,462 [wrapper] pandaids: 6839870891
[2025-10-12 20:08:33] 2025-10-13 00:08:32,275 [wrapper] cleanup supervisor_pilot  605087 4127722
[2025-10-12 20:08:33] 2025-10-13 00:08:32,288 [wrapper] Test setup, not cleaning
[2025-10-12 20:08:33] 2025-10-13 00:08:32,323 [wrapper] apfmon messages muted
[2025-10-12 20:08:33] 2025-10-13 00:08:32,334 [wrapper] ==== wrapper stdout END ====
[2025-10-12 20:08:33] 2025-10-13 00:08:32,374 [wrapper] ==== wrapper stderr END ====
[2025-10-12 20:08:33]  *** Error codes and diagnostics ***
[2025-10-12 20:08:33]     "exeErrorCode": 0,
[2025-10-12 20:08:33]     "exeErrorDiag": "",
[2025-10-12 20:08:33]     "pilotErrorCode": 0,
[2025-10-12 20:08:33]     "pilotErrorDiag": "",
[2025-10-12 20:08:33]  *** Listing of results directory ***
[2025-10-12 20:08:33] total 407820
[2025-10-12 20:08:33] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 07:23 pilot3.tar.gz
[2025-10-12 20:08:33] -rwx------. 1 boincer umatlas     36292 Oct 12 07:27 runpilot2-wrapper.sh
[2025-10-12 20:08:33] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 07:27 queuedata.json
[2025-10-12 20:08:33] -rw-r--r--. 1 boincer umatlas       100 Oct 12 16:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 20:08:33] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 16:53 run_atlas
[2025-10-12 20:08:33] -rw-r--r--. 1 boincer umatlas       105 Oct 12 16:53 job.xml
[2025-10-12 20:08:33] -rw-r--r--. 2 boincer umatlas 218670767 Oct 12 16:53 EVNT.46676267._003679.pool.root.1
[2025-10-12 20:08:33] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 16:53 shared
[2025-10-12 20:08:33] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 16:53 input.tar.gz
[2025-10-12 20:08:33] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 16:53 start_atlas.sh
[2025-10-12 20:08:33] -rw-r--r--. 1 boincer umatlas         0 Oct 12 16:53 boinc_lockfile
[2025-10-12 20:08:33] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 16:53 pandaJob.out
[2025-10-12 20:08:33] -rw-------. 1 boincer umatlas    975536 Oct 12 16:54 agis_schedconf.cvmfs.json
[2025-10-12 20:08:33] drwx------. 5 boincer umatlas      4096 Oct 12 16:54 pilot3
[2025-10-12 20:08:33] -rw-r--r--. 1 boincer umatlas      6856 Oct 12 20:01 init_data.xml
[2025-10-12 20:08:33] -rw-------. 1 boincer umatlas 191199279 Oct 12 20:05 HITS.46676269._077128.pool.root.1
[2025-10-12 20:08:33] -rw-r--r--. 1 boincer umatlas       531 Oct 12 20:06 boinc_task_state.xml
[2025-10-12 20:08:33] -rw-------. 1 boincer umatlas      1043 Oct 12 20:06 memory_monitor_summary.json
[2025-10-12 20:08:33] -rw-------. 1 boincer umatlas   1560580 Oct 12 20:06 agis_ddmendpoints.agis.ALL.json
[2025-10-12 20:08:33] -rw-------. 1 boincer umatlas    421824 Oct 12 20:06 log.46676269._077128.job.log.tgz.1
[2025-10-12 20:08:33] -rw-------. 1 boincer umatlas      7829 Oct 12 20:07 heartbeat.json
[2025-10-12 20:08:33] -rw-------. 1 boincer umatlas        95 Oct 12 20:08 pilot_heartbeat.json
[2025-10-12 20:08:33] -rw-r--r--. 1 boincer umatlas        28 Oct 12 20:08 wrapper_checkpoint.txt
[2025-10-12 20:08:33] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 20:08 boinc_mmap_file
[2025-10-12 20:08:33] -rw-------. 1 boincer umatlas      5010 Oct 12 20:08 pilotlog.txt
[2025-10-12 20:08:33] -rw-------. 1 boincer umatlas   1495554 Oct 12 20:08 log.46676269._077128.job.log.1
[2025-10-12 20:08:33] -rw-------. 1 boincer umatlas       357 Oct 12 20:08 output.list
[2025-10-12 20:08:33] -rw-r--r--. 1 boincer umatlas       620 Oct 12 20:08 runtime_log
[2025-10-12 20:08:33] -rw-------. 1 boincer umatlas   1935360 Oct 12 20:08 result.tar.gz
[2025-10-12 20:08:33] -rw-r--r--. 1 boincer umatlas      8704 Oct 12 20:08 runtime_log.err
[2025-10-12 20:08:33] -rw-------. 1 boincer umatlas       655 Oct 12 20:08 bxKKDmqP9R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmadjNDmhrkzZn.diag
[2025-10-12 20:08:33] -rw-r--r--. 1 boincer umatlas     21298 Oct 12 20:08 stderr.txt
[2025-10-12 20:08:33] HITS file was successfully produced:
[2025-10-12 20:08:33] -rw-------. 1 boincer umatlas 191199279 Oct 12 20:05 shared/HITS.pool.root.1
[2025-10-12 20:08:33]  *** Contents of shared directory: ***
[2025-10-12 20:08:33] total 402740
[2025-10-12 20:08:33] -rw-r--r--. 2 boincer umatlas 218670767 Oct 12 16:53 ATLAS.root_0
[2025-10-12 20:08:33] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 16:53 input.tar.gz
[2025-10-12 20:08:33] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 16:53 start_atlas.sh
[2025-10-12 20:08:33] -rw-------. 1 boincer umatlas 191199279 Oct 12 20:05 HITS.pool.root.1
[2025-10-12 20:08:33] -rw-------. 1 boincer umatlas   1935360 Oct 12 20:08 result.tar.gz
20:08:34 (4118577): run_atlas exited; CPU time 39333.135941
20:08:34 (4118577): called boinc_finish(0)

</stderr_txt>
]]>

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