Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:02:54 (3277676): wrapper (7.7.26015): starting
03:02:54 (3277676): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 03:02:54] Arguments: --nthreads 3
[2025-10-13 03:02:54] Threads: 3
[2025-10-13 03:02:54] Checking for CVMFS
[2025-10-13 03:02:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 03:02:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 03:02:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 03:02:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 03:02:54] 2.9.2.0 1774758 4918 82056 151642 3 57 27812130 36864000 0 130560 0 3927764 99.991 173192 787 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 03:02:54] CVMFS is ok
[2025-10-13 03:02:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 03:02:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 03:02:54] Further information can be found at the LHC@home message board.
[2025-10-13 03:02:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 03:02:54] Checking for apptainer binary...
[2025-10-13 03:02:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 03:02:54] Running /usr/bin/apptainer --version
[2025-10-13 03:02:54] apptainer version 1.4.1-1.1
[2025-10-13 03:02:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 03:02:54] legendA269a
[2025-10-13 03:02:54] apptainer works
[2025-10-13 03:02:54] Set ATHENA_PROC_NUMBER=3
[2025-10-13 03:02:54] Set ATHENA_CORE_NUMBER=3
[2025-10-13 03:02:54] Starting ATLAS job with PandaID=6840081222
[2025-10-13 03:02:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 04:26:31]  *** The last 200 lines of the pilot log: ***
[2025-10-13 04:26:31] 2025-10-13 02:25:52,739 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6840081222/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 04:26:31] 2025-10-13 02:25:52,740 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6840081222/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 04:26:31] 2025-10-13 02:25:52,740 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-10-13 04:26:31] 2025-10-13 02:25:52,740 | WARNING  | maxPSS not found in memory monitor output
[2025-10-13 04:26:31] 2025-10-13 02:25:52,740 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 1733099 B
[2025-10-13 04:26:31] 2025-10-13 02:25:52,740 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15303 B
[2025-10-13 04:26:31] 2025-10-13 02:25:52,740 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 04:26:31] 2025-10-13 02:25:52,750 | INFO     | sufficient remaining disk space (376900157440 B)
[2025-10-13 04:26:31] 2025-10-13 02:25:52,751 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-13 04:26:31] 2025-10-13 02:25:52,751 | INFO     | size of work directory /local/data/boinc/slots/0/PanDA_Pilot-6840081222: 2031263 B (within 2537553920 B limit)
[2025-10-13 04:26:31] 2025-10-13 02:25:52,751 | INFO     | pfn file=/local/data/boinc/slots/0/PanDA_Pilot-6840081222/HITS.46676269._079590.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-13 04:26:31] 2025-10-13 02:25:52,751 | INFO     | total size of present files: 0 B (workdir size: 2031263 B)
[2025-10-13 04:26:31] 2025-10-13 02:25:52,751 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6840081222/HITS.46676269._079590.pool.root.1 since it does not exist
[2025-10-13 04:26:31] 2025-10-13 02:25:52,788 | INFO     | number of running child processes to parent process 3287841: 1
[2025-10-13 04:26:31] 2025-10-13 02:25:52,788 | INFO     | maximum number of monitored processes: 6
[2025-10-13 04:26:31] 2025-10-13 02:25:53,857 | INFO     | time since job start (4973s) is within the limit (172800.0s)
[2025-10-13 04:26:31] 2025-10-13 02:25:54,062 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 04:26:31] 2025-10-13 02:25:54,095 | INFO     | job 6840081222 has state=finished
[2025-10-13 04:26:31] 2025-10-13 02:25:54,095 | INFO     | preparing for final server update for job 6840081222 in state='finished'
[2025-10-13 04:26:31] 2025-10-13 02:25:54,096 | INFO     | this job has now completed (state=finished)
[2025-10-13 04:26:31] 2025-10-13 02:25:54,096 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 04:26:31] 2025-10-13 02:25:54,096 | INFO     | log transfer has been attempted: DONE
[2025-10-13 04:26:31] 2025-10-13 02:25:54,096 | INFO     | job 6840081222 has finished - writing final server update
[2025-10-13 04:26:31] 2025-10-13 02:25:54,096 | INFO     | total number of processed events: 400 (read)
[2025-10-13 04:26:31] 2025-10-13 02:25:54,097 | INFO     | executing command: lscpu
[2025-10-13 04:26:31] 2025-10-13 02:25:54,110 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 04:26:31] 2025-10-13 02:25:54,914 | INFO     | PID=3281397 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 04:26:31] 2025-10-13 02:25:55,290 | INFO     | monitor loop #383: job 0:6840081222 is in state 'finished'
[2025-10-13 04:26:31] 2025-10-13 02:25:55,290 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 04:26:31] 2025-10-13 02:25:55,915 | INFO     | time since job start (4975s) is within the limit (172800.0s)
[2025-10-13 04:26:31] 2025-10-13 02:25:57,793 | INFO     | monitor loop #384: job 0:6840081222 is in state 'finished'
[2025-10-13 04:26:31] 2025-10-13 02:25:57,794 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 04:26:31] 2025-10-13 02:25:57,920 | INFO     | time since job start (4977s) is within the limit (172800.0s)
[2025-10-13 04:26:31] 2025-10-13 02:25:58,485 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 04:26:31] 2025-10-13 02:25:58,486 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3772.1018333333336
[2025-10-13 04:26:31] 2025-10-13 02:25:58,487 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6840081222/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 04:26:31] 2025-10-13 02:25:58,487 | INFO     | extracted standard info from prmon json
[2025-10-13 04:26:31] 2025-10-13 02:25:58,487 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 04:26:31] 2025-10-13 02:25:58,487 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 04:26:31] 2025-10-13 02:25:58,487 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 04:26:31] 2025-10-13 02:25:58,487 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 04:26:31] 2025-10-13 02:25:58,488 | INFO     | fitting pss+swap vs Time
[2025-10-13 04:26:31] 2025-10-13 02:25:58,488 | INFO     | sum of square deviations: 130793150.0
[2025-10-13 04:26:31] 2025-10-13 02:25:58,488 | INFO     | sum of deviations: -3792361338.0
[2025-10-13 04:26:31] 2025-10-13 02:25:58,488 | INFO     | mean x: 1760319962.0
[2025-10-13 04:26:31] 2025-10-13 02:25:58,488 | INFO     | mean y: 2383796.6933333334
[2025-10-13 04:26:31] 2025-10-13 02:25:58,489 | INFO     | -- intersect: 51043048895.732765
[2025-10-13 04:26:31] 2025-10-13 02:25:58,489 | INFO     | intersect: 51043048895.732765
[2025-10-13 04:26:31] 2025-10-13 02:25:58,489 | INFO     | chi2: 0.10743529935257905
[2025-10-13 04:26:31] 2025-10-13 02:25:58,489 | INFO     | -- intersect: 51043048895.732765
[2025-10-13 04:26:31] 2025-10-13 02:25:58,489 | INFO     | current memory leak: -29.00 B/s (using 75 data points, chi2=0.11)
[2025-10-13 04:26:31] 2025-10-13 02:25:58,489 | INFO     | could have reported an average CPU frequency of 3892 MHz (6 samples)
[2025-10-13 04:26:31] 2025-10-13 02:25:58,489 | INFO     | ..............................
[2025-10-13 04:26:31] 2025-10-13 02:25:58,489 | INFO     | . Timing measurements:
[2025-10-13 04:26:31] 2025-10-13 02:25:58,489 | INFO     | . get job = 0 s
[2025-10-13 04:26:31] 2025-10-13 02:25:58,489 | INFO     | . initial setup = 1 s
[2025-10-13 04:26:31] 2025-10-13 02:25:58,489 | INFO     | . payload setup = 3 s
[2025-10-13 04:26:31] 2025-10-13 02:25:58,489 | INFO     | . stage-in = 0 s
[2025-10-13 04:26:31] 2025-10-13 02:25:58,489 | INFO     | . payload execution = 4950 s
[2025-10-13 04:26:31] 2025-10-13 02:25:58,489 | INFO     | . stage-out = 0 s
[2025-10-13 04:26:31] 2025-10-13 02:25:58,489 | INFO     | . log creation = 0 s
[2025-10-13 04:26:31] 2025-10-13 02:25:58,489 | INFO     | ..............................
[2025-10-13 04:26:31] 2025-10-13 02:25:58,519 | INFO     | 
[2025-10-13 04:26:31] 2025-10-13 02:25:58,519 | INFO     | job summary report
[2025-10-13 04:26:31] 2025-10-13 02:25:58,519 | INFO     | --------------------------------------------------
[2025-10-13 04:26:31] 2025-10-13 02:25:58,519 | INFO     | PanDA job id: 6840081222
[2025-10-13 04:26:31] 2025-10-13 02:25:58,519 | INFO     | task id: 46676269
[2025-10-13 04:26:31] 2025-10-13 02:25:58,519 | INFO     | errors: (none)
[2025-10-13 04:26:31] 2025-10-13 02:25:58,519 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 04:26:31] 2025-10-13 02:25:58,519 | INFO     | pilot state: finished 
[2025-10-13 04:26:31] 2025-10-13 02:25:58,519 | INFO     | transexitcode: 0
[2025-10-13 04:26:31] 2025-10-13 02:25:58,519 | INFO     | exeerrorcode: 0
[2025-10-13 04:26:31] 2025-10-13 02:25:58,519 | INFO     | exeerrordiag: 
[2025-10-13 04:26:31] 2025-10-13 02:25:58,519 | INFO     | exitcode: 0
[2025-10-13 04:26:31] 2025-10-13 02:25:58,519 | INFO     | exitmsg: OK
[2025-10-13 04:26:31] 2025-10-13 02:25:58,519 | INFO     | cpuconsumptiontime: 14295 s
[2025-10-13 04:26:31] 2025-10-13 02:25:58,519 | INFO     | nevents: 400
[2025-10-13 04:26:31] 2025-10-13 02:25:58,519 | INFO     | neventsw: 0
[2025-10-13 04:26:31] 2025-10-13 02:25:58,519 | INFO     | pid: 3287841
[2025-10-13 04:26:31] 2025-10-13 02:25:58,519 | INFO     | pgrp: 3287841
[2025-10-13 04:26:31] 2025-10-13 02:25:58,519 | INFO     | corecount: 3
[2025-10-13 04:26:31] 2025-10-13 02:25:58,519 | INFO     | event service: False
[2025-10-13 04:26:31] 2025-10-13 02:25:58,520 | INFO     | sizes: {0: 2348858, 3: 2349120, 11: 2349148, 4957: 2375584, 4959: 2384588, 4960: 2384672, 4965: 2384994}
[2025-10-13 04:26:31] 2025-10-13 02:25:58,520 | INFO     | --------------------------------------------------
[2025-10-13 04:26:31] 2025-10-13 02:25:58,520 | INFO     | 
[2025-10-13 04:26:31] 2025-10-13 02:25:58,520 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-13 04:26:31] 2025-10-13 02:25:58,531 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 04:26:31] 2025-10-13 02:25:58,531 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 04:26:31] 2025-10-13 02:25:58,531 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 04:26:31] 2025-10-13 02:25:58,532 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 04:26:31] 2025-10-13 02:25:58,532 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 04:26:31] 2025-10-13 02:25:58,532 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 04:26:31] 2025-10-13 02:25:58,532 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 04:26:31] 2025-10-13 02:25:58,532 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 04:26:31] 2025-10-13 02:25:58,532 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 04:26:31] 2025-10-13 02:25:58,532 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 04:26:31] 2025-10-13 02:25:58,532 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 04:26:31] 2025-10-13 02:25:58,532 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 04:26:31] 2025-10-13 02:25:58,532 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 04:26:31] 2025-10-13 02:25:58,532 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 04:26:31] 2025-10-13 02:25:58,532 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 04:26:31] 2025-10-13 02:25:58,532 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 04:26:31] 2025-10-13 02:25:58,532 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 04:26:31] 2025-10-13 02:25:58,532 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 04:26:31] 2025-10-13 02:25:58,532 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 04:26:31] 2025-10-13 02:25:58,532 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 04:26:31] 2025-10-13 02:25:58,532 | INFO     | job 6840081222 has completed (purged errors)
[2025-10-13 04:26:31] 2025-10-13 02:25:58,532 | INFO     | overall cleanup function is called
[2025-10-13 04:26:31] 2025-10-13 02:25:59,539 | INFO     | --- collectZombieJob: --- 10, [3287841]
[2025-10-13 04:26:31] 2025-10-13 02:25:59,539 | INFO     | zombie collector waiting for pid 3287841
[2025-10-13 04:26:31] 2025-10-13 02:25:59,539 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 04:26:31] 2025-10-13 02:25:59,539 | INFO     | collected zombie processes
[2025-10-13 04:26:31] 2025-10-13 02:25:59,539 | INFO     | will attempt to kill all subprocesses of pid=3287841
[2025-10-13 04:26:31] 2025-10-13 02:25:59,580 | INFO     | process IDs to be killed: [3287841] (in reverse order)
[2025-10-13 04:26:31] 2025-10-13 02:25:59,605 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 04:26:31] 2025-10-13 02:25:59,606 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 04:26:31] 2025-10-13 02:25:59,607 | INFO     | did not find any defunct processes belonging to 3287841
[2025-10-13 04:26:31] 2025-10-13 02:25:59,608 | INFO     | did not find any defunct processes belonging to 3287841
[2025-10-13 04:26:31] 2025-10-13 02:25:59,608 | INFO     | ready for new job
[2025-10-13 04:26:31] 2025-10-13 02:25:59,608 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 04:26:31] 2025-10-13 02:25:59,609 | INFO     | ***************************************
[2025-10-13 04:26:31] 2025-10-13 02:25:59,609 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 04:26:31] 2025-10-13 02:25:59,609 | INFO     | ***************************************
[2025-10-13 04:26:31] 2025-10-13 02:25:59,609 | INFO     | 
[2025-10-13 04:26:31] 2025-10-13 02:25:59,609 | INFO     | architecture information:
[2025-10-13 04:26:31] 2025-10-13 02:25:59,609 | INFO     | executing command: cat /etc/os-release
[2025-10-13 04:26:31] 2025-10-13 02:25:59,618 | INFO     | cat /etc/os-release:
[2025-10-13 04:26:31] NAME="CentOS Linux"
[2025-10-13 04:26:31] VERSION="7 (Core)"
[2025-10-13 04:26:31] ID="centos"
[2025-10-13 04:26:31] ID_LIKE="rhel fedora"
[2025-10-13 04:26:31] VERSION_ID="7"
[2025-10-13 04:26:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 04:26:31] ANSI_COLOR="0;31"
[2025-10-13 04:26:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 04:26:31] HOME_URL="https://www.centos.org/"
[2025-10-13 04:26:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 04:26:31] 
[2025-10-13 04:26:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 04:26:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 04:26:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 04:26:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 04:26:31] 
[2025-10-13 04:26:31] 2025-10-13 02:25:59,618 | INFO     | ***************************************
[2025-10-13 04:26:31] 2025-10-13 02:26:00,122 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 04:26:31] 2025-10-13 02:26:00,134 | INFO     | sufficient remaining disk space (376902254592 B)
[2025-10-13 04:26:31] 2025-10-13 02:26:00,135 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 04:26:31] 2025-10-13 02:26:00,135 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 04:26:31] 2025-10-13 02:26:00,135 | INFO     | update_server=False
[2025-10-13 04:26:31] 2025-10-13 02:26:00,135 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 04:26:31] 2025-10-13 02:26:00,135 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 04:26:31] 2025-10-13 02:26:00,135 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:26:31] 2025-10-13 02:26:00,139 | INFO     | all payload control threads have been joined
[2025-10-13 04:26:31] 2025-10-13 02:26:00,298 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 04:26:31] 2025-10-13 02:26:00,298 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 04:26:31] 2025-10-13 02:26:00,298 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:26:31] 2025-10-13 02:26:00,298 | INFO     | will abort loop
[2025-10-13 04:26:31] 2025-10-13 02:26:00,434 | INFO     | all data control threads have been joined
[2025-10-13 04:26:31] 2025-10-13 02:26:00,514 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 04:26:31] 2025-10-13 02:26:01,136 | INFO     | [job] retrieve thread has finished
[2025-10-13 04:26:31] 2025-10-13 02:26:01,139 | INFO     | [job] queue monitor thread has finished
[2025-10-13 04:26:31] 2025-10-13 02:26:01,144 | INFO     | [payload] control thread has finished
[2025-10-13 04:26:31] 2025-10-13 02:26:01,225 | INFO     | all job control threads have been joined
[2025-10-13 04:26:31] 2025-10-13 02:26:01,268 | INFO     | [data] copytool_in thread has finished
[2025-10-13 04:26:31] 2025-10-13 02:26:01,304 | INFO     | [job] job monitor thread has finished
[2025-10-13 04:26:31] 2025-10-13 02:26:01,363 | INFO     | [payload] validate_post thread has finished
[2025-10-13 04:26:31] 2025-10-13 02:26:01,438 | INFO     | [data] control thread has finished
[2025-10-13 04:26:31] 2025-10-13 02:26:01,606 | INFO     | [job] validate thread has finished
[2025-10-13 04:26:31] 2025-10-13 02:26:01,660 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 04:26:31] 2025-10-13 02:26:01,723 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 04:26:31] 2025-10-13 02:26:02,226 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 04:26:31] 2025-10-13 02:26:02,230 | INFO     | [job] control thread has finished
[2025-10-13 04:26:31] 2025-10-13 02:26:02,294 | INFO     | [payload] failed_post thread has finished
[2025-10-13 04:26:31] 2025-10-13 02:26:02,521 | INFO     | [data] copytool_out thread has finished
[2025-10-13 04:26:31] 2025-10-13 02:26:04,142 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 04:26:31] 2025-10-13 02:26:07,039 | INFO     | [monitor] cgroup control has ended
[2025-10-13 04:26:31] 2025-10-13 02:26:10,629 | INFO     | job.realtimelogging is not enabled
[2025-10-13 04:26:31] 2025-10-13 02:26:11,634 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 04:26:31] 2025-10-13 02:26:13,209 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139849045092160)>', '<ExcThread(monitor, started 139848421730048)>']
[2025-10-13 04:26:31] 2025-10-13 02:26:18,232 | INFO     | all workflow threads have been joined
[2025-10-13 04:26:31] 2025-10-13 02:26:18,232 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 04:26:31] 2025-10-13 02:26:18,232 | INFO     | traces error code: 0
[2025-10-13 04:26:31] 2025-10-13 02:26:18,232 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 04:26:31] 2025-10-13 02:26:31,054 | INFO     | PID=3281397 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 04:26:31] 2025-10-13 02:26:31,054 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 04:26:31] 2025-10-13 02:26:31,054 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 04:26:31] 2025-10-13 02:26:31,054 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 04:26:31] 2025-10-13 02:26:31,054 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 04:26:31] 2025-10-13 02:26:31,055 | CRITICAL | thread 'MainThread' is not alive
[2025-10-13 04:26:31] 2025-10-13 02:26:31,055 | INFO     | [monitor] control thread has ended
[2025-10-13 04:26:31] 2025-10-13 02:26:31,103 [wrapper] ==== pilot stdout END ====
[2025-10-13 04:26:31] 2025-10-13 02:26:31,106 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 04:26:31] 2025-10-13 02:26:31,108 [wrapper] pilotpid: 3281397
[2025-10-13 04:26:31] 2025-10-13 02:26:31,111 [wrapper] Pilot exit status: 0
[2025-10-13 04:26:31] 2025-10-13 02:26:31,119 [wrapper] pandaids: 6840081222
[2025-10-13 04:26:31] 2025-10-13 02:26:31,135 [wrapper] cleanup supervisor_pilot 3299603 3281398
[2025-10-13 04:26:31] 2025-10-13 02:26:31,138 [wrapper] Test setup, not cleaning
[2025-10-13 04:26:31] 2025-10-13 02:26:31,140 [wrapper] apfmon messages muted
[2025-10-13 04:26:31] 2025-10-13 02:26:31,143 [wrapper] ==== wrapper stdout END ====
[2025-10-13 04:26:31] 2025-10-13 02:26:31,145 [wrapper] ==== wrapper stderr END ====
[2025-10-13 04:26:31]  *** Error codes and diagnostics ***
[2025-10-13 04:26:31]     "exeErrorCode": 0,
[2025-10-13 04:26:31]     "exeErrorDiag": "",
[2025-10-13 04:26:31]     "pilotErrorCode": 0,
[2025-10-13 04:26:31]     "pilotErrorDiag": "",
[2025-10-13 04:26:31]  *** Listing of results directory ***
[2025-10-13 04:26:31] total 413328
[2025-10-13 04:26:31] -rw-r--r-- 1 boinc boinc    557409 Oct 12 15:22 pilot3.tar.gz
[2025-10-13 04:26:31] -rw-r--r-- 1 boinc boinc      5112 Oct 12 15:34 queuedata.json
[2025-10-13 04:26:31] -rwx------ 1 boinc boinc     36292 Oct 12 15:37 runpilot2-wrapper.sh
[2025-10-13 04:26:31] -rw-r--r-- 1 boinc boinc       100 Oct 13 03:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 04:26:31] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 03:02 run_atlas
[2025-10-13 04:26:31] -rw-r--r-- 1 boinc boinc       105 Oct 13 03:02 job.xml
[2025-10-13 04:26:31] -rw-r--r-- 2 boinc boinc 220112456 Oct 13 03:02 EVNT.46676267._003871.pool.root.1
[2025-10-13 04:26:31] drwxrwx--x 2 boinc boinc      4096 Oct 13 03:02 shared
[2025-10-13 04:26:31] -rw-r--r-- 2 boinc boinc    569680 Oct 13 03:02 input.tar.gz
[2025-10-13 04:26:31] -rw-r--r-- 2 boinc boinc     15120 Oct 13 03:02 start_atlas.sh
[2025-10-13 04:26:31] -rw-r--r-- 1 boinc boinc         0 Oct 13 03:02 boinc_setup_complete
[2025-10-13 04:26:31] -rw-r--r-- 1 boinc boinc      6450 Oct 13 03:02 init_data.xml
[2025-10-13 04:26:31] -rw-r--r-- 1 boinc boinc         0 Oct 13 03:02 boinc_lockfile
[2025-10-13 04:26:31] -rw-r--r-- 1 boinc boinc      2549 Oct 13 03:02 pandaJob.out
[2025-10-13 04:26:31] -rw------- 1 boinc boinc    975603 Oct 13 03:02 agis_schedconf.cvmfs.json
[2025-10-13 04:26:31] -rw------- 1 boinc boinc   1560580 Oct 13 03:03 agis_ddmendpoints.agis.ALL.json
[2025-10-13 04:26:31] drwx------ 5 boinc boinc      4096 Oct 13 03:03 pilot3
[2025-10-13 04:26:31] -rw------- 1 boinc boinc 197287313 Oct 13 04:25 HITS.46676269._079590.pool.root.1
[2025-10-13 04:26:31] -rw-r--r-- 1 boinc boinc       529 Oct 13 04:25 boinc_task_state.xml
[2025-10-13 04:26:31] -rw------- 1 boinc boinc      1016 Oct 13 04:25 memory_monitor_summary.json
[2025-10-13 04:26:31] -rw------- 1 boinc boinc    240172 Oct 13 04:25 log.46676269._079590.job.log.tgz.1
[2025-10-13 04:26:31] -rw------- 1 boinc boinc      7758 Oct 13 04:25 heartbeat.json
[2025-10-13 04:26:31] -rw-r--r-- 1 boinc boinc      8192 Oct 13 04:26 boinc_mmap_file
[2025-10-13 04:26:31] -rw-r--r-- 1 boinc boinc        27 Oct 13 04:26 wrapper_checkpoint.txt
[2025-10-13 04:26:31] -rw------- 1 boinc boinc       817 Oct 13 04:26 pilotlog.txt
[2025-10-13 04:26:31] -rw------- 1 boinc boinc        95 Oct 13 04:26 pilot_heartbeat.json
[2025-10-13 04:26:31] -rw------- 1 boinc boinc    731844 Oct 13 04:26 log.46676269._079590.job.log.1
[2025-10-13 04:26:31] -rw------- 1 boinc boinc       357 Oct 13 04:26 output.list
[2025-10-13 04:26:31] -rw-r--r-- 1 boinc boinc       620 Oct 13 04:26 runtime_log
[2025-10-13 04:26:31] -rw------- 1 boinc boinc    993280 Oct 13 04:26 result.tar.gz
[2025-10-13 04:26:31] -rw-r--r-- 1 boinc boinc      8802 Oct 13 04:26 runtime_log.err
[2025-10-13 04:26:31] -rw------- 1 boinc boinc       663 Oct 13 04:26 mbCODmIRBS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmF3jNDmHkRbGn.diag
[2025-10-13 04:26:31] -rw-r--r-- 1 boinc boinc     22484 Oct 13 04:26 stderr.txt
[2025-10-13 04:26:31] HITS file was successfully produced:
[2025-10-13 04:26:31] -rw------- 1 boinc boinc 197287313 Oct 13 04:25 shared/HITS.pool.root.1
[2025-10-13 04:26:31]  *** Contents of shared directory: ***
[2025-10-13 04:26:31] total 409176
[2025-10-13 04:26:31] -rw-r--r-- 2 boinc boinc 220112456 Oct 13 03:02 ATLAS.root_0
[2025-10-13 04:26:31] -rw-r--r-- 2 boinc boinc    569680 Oct 13 03:02 input.tar.gz
[2025-10-13 04:26:31] -rw-r--r-- 2 boinc boinc     15120 Oct 13 03:02 start_atlas.sh
[2025-10-13 04:26:31] -rw------- 1 boinc boinc 197287313 Oct 13 04:25 HITS.pool.root.1
[2025-10-13 04:26:31] -rw------- 1 boinc boinc    993280 Oct 13 04:26 result.tar.gz
04:26:32 (3277676): run_atlas exited; CPU time 14313.915938
04:26:32 (3277676): called boinc_finish(0)

</stderr_txt>
]]>

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