Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:33:41 (3048026): wrapper (7.7.26015): starting
15:33:41 (3048026): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 15:33:41] Arguments: --nthreads 8
[2025-10-12 15:33:41] Threads: 8
[2025-10-12 15:33:41] Checking for CVMFS
[2025-10-12 15:33:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:33:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:33:42] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:34:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:34:03] 2.13.2.0 3361836 4619 147008 151635 1 65 19809938 32935936 20554 16776704 0 12066562 99.835 6094056 31135 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 15:34:03] CVMFS is ok
[2025-10-12 15:34:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:34:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 15:34:03] Further information can be found at the LHC@home message board.
[2025-10-12 15:34:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:34:03] Checking for apptainer binary...
[2025-10-12 15:34:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:34:03] Running /usr/bin/apptainer --version
[2025-10-12 15:34:03] apptainer version 1.4.3-1.el9
[2025-10-12 15:34:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:34:04] c-8-14.aglt2.org
[2025-10-12 15:34:04] apptainer works
[2025-10-12 15:34:04] Set ATHENA_PROC_NUMBER=8
[2025-10-12 15:34:04] Set ATHENA_CORE_NUMBER=8
[2025-10-12 15:34:05] Starting ATLAS job with PandaID=6840081261
[2025-10-12 15:34:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 21:06:05]  *** The last 200 lines of the pilot log: ***
[2025-10-12 21:06:05] 2025-10-13 01:04:56,128 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6840081261/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 21:06:05] 2025-10-13 01:04:56,129 | INFO     | extracted standard info from prmon json
[2025-10-12 21:06:05] 2025-10-13 01:04:56,130 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 21:06:05] 2025-10-13 01:04:56,130 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 21:06:05] 2025-10-13 01:04:56,130 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 21:06:05] 2025-10-13 01:04:56,130 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 21:06:05] 2025-10-13 01:04:56,137 | INFO     | fitting pss+swap vs Time
[2025-10-12 21:06:05] 2025-10-13 01:04:56,138 | INFO     | sum of square deviations: 10256022445.663464
[2025-10-12 21:06:05] 2025-10-13 01:04:56,142 | INFO     | sum of deviations: 4057108820.7289734
[2025-10-12 21:06:05] 2025-10-13 01:04:56,142 | INFO     | mean x: 1760307651.6635513
[2025-10-12 21:06:05] 2025-10-13 01:04:56,142 | INFO     | mean y: 2115609.062305296
[2025-10-12 21:06:05] 2025-10-13 01:04:56,142 | INFO     | -- intersect: -694232291.753828
[2025-10-12 21:06:05] 2025-10-13 01:04:56,143 | INFO     | intersect: -694232291.753828
[2025-10-12 21:06:05] 2025-10-13 01:04:56,143 | INFO     | chi2: 3.778194733704226
[2025-10-12 21:06:05] 2025-10-13 01:04:56,144 | INFO     | sum of square deviations: 9784226544.772234
[2025-10-12 21:06:05] 2025-10-13 01:04:56,147 | INFO     | sum of deviations: 28852603300.879726
[2025-10-12 21:06:05] 2025-10-13 01:04:56,147 | INFO     | mean x: 1760307499.170886
[2025-10-12 21:06:05] 2025-10-13 01:04:56,147 | INFO     | mean y: 2123535.9651898732
[2025-10-12 21:06:05] 2025-10-13 01:04:56,147 | INFO     | -- intersect: -5188828833.006512
[2025-10-12 21:06:05] 2025-10-13 01:04:56,147 | INFO     | intersect: -5188828833.006512
[2025-10-12 21:06:05] 2025-10-13 01:04:56,148 | INFO     | chi2: 2.8911680039807703
[2025-10-12 21:06:05] 2025-10-13 01:04:56,148 | INFO     | current chi2=2.8911680039807703 (change=23.477528085319065 %)
[2025-10-12 21:06:05] 2025-10-13 01:04:56,148 | INFO     | right removable region: 315
[2025-10-12 21:06:05] 2025-10-13 01:04:56,149 | INFO     | sum of square deviations: 9784116073.427233
[2025-10-12 21:06:05] 2025-10-13 01:04:56,152 | INFO     | sum of deviations: -59587523946.84808
[2025-10-12 21:06:05] 2025-10-13 01:04:56,152 | INFO     | mean x: 1760307804.1740506
[2025-10-12 21:06:05] 2025-10-13 01:04:56,153 | INFO     | mean y: 2136107.506329114
[2025-10-12 21:06:05] 2025-10-13 01:04:56,153 | INFO     | -- intersect: 10722816713.485949
[2025-10-12 21:06:05] 2025-10-13 01:04:56,153 | INFO     | intersect: 10722816713.485949
[2025-10-12 21:06:05] 2025-10-13 01:04:56,154 | INFO     | chi2: 1.4898985048732298
[2025-10-12 21:06:05] 2025-10-13 01:04:56,154 | INFO     | current chi2=1.4898985048732298 (change=60.56586253794016 %)
[2025-10-12 21:06:05] 2025-10-13 01:04:56,154 | INFO     | sum of square deviations: 9326907651.118912
[2025-10-12 21:06:05] 2025-10-13 01:04:56,158 | INFO     | sum of deviations: -74701437855.86168
[2025-10-12 21:06:05] 2025-10-13 01:04:56,158 | INFO     | mean x: 1760307956.6848874
[2025-10-12 21:06:05] 2025-10-13 01:04:56,158 | INFO     | mean y: 2141119.0932475883
[2025-10-12 21:06:05] 2025-10-13 01:04:56,158 | INFO     | -- intersect: 14100869266.969755
[2025-10-12 21:06:05] 2025-10-13 01:04:56,158 | INFO     | intersect: 14100869266.969755
[2025-10-12 21:06:05] 2025-10-13 01:04:56,159 | INFO     | chi2: 1.292369467657519
[2025-10-12 21:06:05] 2025-10-13 01:04:56,159 | INFO     | current chi2=1.292369467657519 (change=13.257885457943852 %)
[2025-10-12 21:06:05] 2025-10-13 01:04:56,159 | INFO     | left removable region: 20
[2025-10-12 21:06:05] 2025-10-13 01:04:56,159 | INFO     | sum of square deviations: 7960077228.508484
[2025-10-12 21:06:05] 2025-10-13 01:04:56,162 | INFO     | sum of deviations: -41761555280.57626
[2025-10-12 21:06:05] 2025-10-13 01:04:56,163 | INFO     | mean x: 1760308078.7118645
[2025-10-12 21:06:05] 2025-10-13 01:04:56,163 | INFO     | mean y: 2147480.993220339
[2025-10-12 21:06:05] 2025-10-13 01:04:56,163 | INFO     | -- intersect: 9237384907.671432
[2025-10-12 21:06:05] 2025-10-13 01:04:56,163 | INFO     | intersect: 9237384907.671432
[2025-10-12 21:06:05] 2025-10-13 01:04:56,163 | INFO     | chi2: 0.30475978351648597
[2025-10-12 21:06:05] 2025-10-13 01:04:56,164 | INFO     | -- intersect: 9237384907.671432
[2025-10-12 21:06:05] 2025-10-13 01:04:56,164 | INFO     | current memory leak: -5.25 B/s (using 295 data points, chi2=0.30)
[2025-10-12 21:06:05] 2025-10-13 01:04:56,165 | INFO     | could have reported an average CPU frequency of 2600 MHz (14 samples)
[2025-10-12 21:06:05] 2025-10-13 01:04:56,165 | INFO     | ..............................
[2025-10-12 21:06:05] 2025-10-13 01:04:56,165 | INFO     | . Timing measurements:
[2025-10-12 21:06:05] 2025-10-13 01:04:56,165 | INFO     | . get job = 1 s
[2025-10-12 21:06:05] 2025-10-13 01:04:56,165 | INFO     | . initial setup = 11 s
[2025-10-12 21:06:05] 2025-10-13 01:04:56,165 | INFO     | . payload setup = 47 s
[2025-10-12 21:06:05] 2025-10-13 01:04:56,165 | INFO     | . stage-in = 0 s
[2025-10-12 21:06:05] 2025-10-13 01:04:56,166 | INFO     | . payload execution = 19605 s
[2025-10-12 21:06:05] 2025-10-13 01:04:56,166 | INFO     | . stage-out = 5 s
[2025-10-12 21:06:05] 2025-10-13 01:04:56,166 | INFO     | . log creation = 0 s
[2025-10-12 21:06:05] 2025-10-13 01:04:56,166 | INFO     | ..............................
[2025-10-12 21:06:05] 2025-10-13 01:04:56,663 | INFO     | time since job start (19773s) is within the limit (172800.0s)
[2025-10-12 21:06:05] 2025-10-13 01:04:56,663 | INFO     | 19787s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-12 21:06:05] 2025-10-13 01:04:56,679 | INFO     | 
[2025-10-12 21:06:05] 2025-10-13 01:04:56,679 | INFO     | job summary report
[2025-10-12 21:06:05] 2025-10-13 01:04:56,679 | INFO     | --------------------------------------------------
[2025-10-12 21:06:05] 2025-10-13 01:04:56,679 | INFO     | PanDA job id: 6840081261
[2025-10-12 21:06:05] 2025-10-13 01:04:56,679 | INFO     | task id: 46676269
[2025-10-12 21:06:05] 2025-10-13 01:04:56,679 | INFO     | errors: (none)
[2025-10-12 21:06:05] 2025-10-13 01:04:56,680 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 21:06:05] 2025-10-13 01:04:56,680 | INFO     | pilot state: finished 
[2025-10-12 21:06:05] 2025-10-13 01:04:56,680 | INFO     | transexitcode: 0
[2025-10-12 21:06:05] 2025-10-13 01:04:56,680 | INFO     | exeerrorcode: 0
[2025-10-12 21:06:05] 2025-10-13 01:04:56,680 | INFO     | exeerrordiag: 
[2025-10-12 21:06:05] 2025-10-13 01:04:56,680 | INFO     | exitcode: 0
[2025-10-12 21:06:05] 2025-10-13 01:04:56,680 | INFO     | exitmsg: OK
[2025-10-12 21:06:05] 2025-10-13 01:04:56,680 | INFO     | cpuconsumptiontime: 49195 s
[2025-10-12 21:06:05] 2025-10-13 01:04:56,681 | INFO     | nevents: 400
[2025-10-12 21:06:05] 2025-10-13 01:04:56,681 | INFO     | neventsw: 0
[2025-10-12 21:06:05] 2025-10-13 01:04:56,681 | INFO     | pid: 3078632
[2025-10-12 21:06:05] 2025-10-13 01:04:56,681 | INFO     | pgrp: 3078632
[2025-10-12 21:06:05] 2025-10-13 01:04:56,681 | INFO     | corecount: 8
[2025-10-12 21:06:05] 2025-10-13 01:04:56,681 | INFO     | event service: False
[2025-10-12 21:06:05] 2025-10-13 01:04:56,681 | INFO     | sizes: {0: 2348029, 1: 2348630, 2: 2348742, 3: 2348941, 14: 2348941, 25: 2348969, 36: 2349125, 42: 2349415, 47: 2349471, 19656: 2382474, 19657: 2382473, 19664: 239
[2025-10-12 21:06:05] 2025-10-13 01:04:56,681 | INFO     | --------------------------------------------------
[2025-10-12 21:06:05] 2025-10-13 01:04:56,681 | INFO     | 
[2025-10-12 21:06:05] 2025-10-13 01:04:56,682 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 21:06:05] 2025-10-13 01:04:56,736 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 21:06:05] 2025-10-13 01:04:56,736 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 21:06:05] 2025-10-13 01:04:56,736 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 21:06:05] 2025-10-13 01:04:56,736 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 21:06:05] 2025-10-13 01:04:56,737 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 21:06:05] 2025-10-13 01:04:56,737 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 21:06:05] 2025-10-13 01:04:56,737 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 21:06:05] 2025-10-13 01:04:56,737 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 21:06:05] 2025-10-13 01:04:56,737 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 21:06:05] 2025-10-13 01:04:56,737 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 21:06:05] 2025-10-13 01:04:56,737 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 21:06:05] 2025-10-13 01:04:56,737 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 21:06:05] 2025-10-13 01:04:56,737 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 21:06:05] 2025-10-13 01:04:56,737 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 21:06:05] 2025-10-13 01:04:56,738 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 21:06:05] 2025-10-13 01:04:56,738 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 21:06:05] 2025-10-13 01:04:56,738 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 21:06:05] 2025-10-13 01:04:56,738 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 21:06:05] 2025-10-13 01:04:56,738 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 21:06:05] 2025-10-13 01:04:56,738 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 21:06:05] 2025-10-13 01:04:56,738 | INFO     | job 6840081261 has completed (purged errors)
[2025-10-12 21:06:05] 2025-10-13 01:04:56,738 | INFO     | overall cleanup function is called
[2025-10-12 21:06:05] 2025-10-13 01:04:57,752 | INFO     | --- collectZombieJob: --- 10, [3078632]
[2025-10-12 21:06:05] 2025-10-13 01:04:57,752 | INFO     | zombie collector waiting for pid 3078632
[2025-10-12 21:06:05] 2025-10-13 01:04:57,752 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 21:06:05] 2025-10-13 01:04:57,752 | INFO     | collected zombie processes
[2025-10-12 21:06:05] 2025-10-13 01:04:57,752 | INFO     | will attempt to kill all subprocesses of pid=3078632
[2025-10-12 21:06:05] 2025-10-13 01:04:59,337 | INFO     | process IDs to be killed: [3078632] (in reverse order)
[2025-10-12 21:06:05] 2025-10-13 01:04:59,615 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 21:06:05] 2025-10-13 01:04:59,675 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 21:06:05] 2025-10-13 01:04:59,847 | INFO     | did not find any defunct processes belonging to 3078632
[2025-10-12 21:06:05] 2025-10-13 01:04:59,883 | INFO     | did not find any defunct processes belonging to 3078632
[2025-10-12 21:06:05] 2025-10-13 01:04:59,883 | INFO     | ready for new job
[2025-10-12 21:06:05] 2025-10-13 01:04:59,883 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 21:06:05] 2025-10-13 01:04:59,895 | INFO     | ***************************************
[2025-10-12 21:06:05] 2025-10-13 01:04:59,895 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 21:06:05] 2025-10-13 01:04:59,895 | INFO     | ***************************************
[2025-10-12 21:06:05] 2025-10-13 01:04:59,895 | INFO     | 
[2025-10-12 21:06:05] 2025-10-13 01:04:59,908 | INFO     | architecture information:
[2025-10-12 21:06:05] 2025-10-13 01:04:59,917 | INFO     | executing command: cat /etc/os-release
[2025-10-12 21:06:05] 2025-10-13 01:04:59,998 | INFO     | cat /etc/os-release:
[2025-10-12 21:06:05] NAME="CentOS Linux"
[2025-10-12 21:06:05] VERSION="7 (Core)"
[2025-10-12 21:06:05] ID="centos"
[2025-10-12 21:06:05] ID_LIKE="rhel fedora"
[2025-10-12 21:06:05] VERSION_ID="7"
[2025-10-12 21:06:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 21:06:05] ANSI_COLOR="0;31"
[2025-10-12 21:06:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 21:06:05] HOME_URL="https://www.centos.org/"
[2025-10-12 21:06:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 21:06:05] 
[2025-10-12 21:06:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 21:06:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 21:06:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 21:06:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 21:06:05] 
[2025-10-12 21:06:05] 2025-10-13 01:04:59,998 | INFO     | ***************************************
[2025-10-12 21:06:05] 2025-10-13 01:05:00,502 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 21:06:05] 2025-10-13 01:05:00,731 | INFO     | sufficient remaining disk space (75683069952 B)
[2025-10-12 21:06:05] 2025-10-13 01:05:00,732 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 21:06:05] 2025-10-13 01:05:00,732 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 21:06:05] 2025-10-13 01:05:00,732 | INFO     | update_server=False
[2025-10-12 21:06:05] 2025-10-13 01:05:00,732 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 21:06:05] 2025-10-13 01:05:01,061 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 21:06:05] 2025-10-13 01:05:01,061 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 21:06:05] 2025-10-13 01:05:01,061 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:06:05] 2025-10-13 01:05:01,061 | INFO     | will abort loop
[2025-10-12 21:06:05] 2025-10-13 01:05:01,266 | INFO     | all job control threads have been joined
[2025-10-12 21:06:05] 2025-10-13 01:05:01,355 | INFO     | all payload control threads have been joined
[2025-10-12 21:06:05] 2025-10-13 01:05:01,488 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:06:05] 2025-10-13 01:05:01,606 | INFO     | all data control threads have been joined
[2025-10-12 21:06:05] 2025-10-13 01:05:01,740 | INFO     | [job] retrieve thread has finished
[2025-10-12 21:06:05] 2025-10-13 01:05:01,786 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 21:06:05] 2025-10-13 01:05:01,849 | INFO     | [payload] failed_post thread has finished
[2025-10-12 21:06:05] 2025-10-13 01:05:01,887 | INFO     | [job] validate thread has finished
[2025-10-12 21:06:05] 2025-10-13 01:05:01,887 | INFO     | [data] copytool_in thread has finished
[2025-10-12 21:06:05] 2025-10-13 01:05:01,888 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 21:06:05] 2025-10-13 01:05:02,029 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 21:06:05] 2025-10-13 01:05:02,067 | INFO     | [job] job monitor thread has finished
[2025-10-12 21:06:05] 2025-10-13 01:05:02,117 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 21:06:05] 2025-10-13 01:05:02,273 | INFO     | [job] control thread has finished
[2025-10-12 21:06:05] 2025-10-13 01:05:02,376 | INFO     | [payload] control thread has finished
[2025-10-12 21:06:05] 2025-10-13 01:05:02,494 | INFO     | [job] queue monitor thread has finished
[2025-10-12 21:06:05] 2025-10-13 01:05:02,615 | INFO     | [data] control thread has finished
[2025-10-12 21:06:05] 2025-10-13 01:05:02,791 | INFO     | [payload] validate_post thread has finished
[2025-10-12 21:06:05] 2025-10-13 01:05:02,909 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 21:06:05] 2025-10-13 01:05:03,191 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 21:06:05] 2025-10-13 01:05:04,124 | INFO     | [data] copytool_out thread has finished
[2025-10-12 21:06:05] 2025-10-13 01:05:06,918 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 21:06:05] 2025-10-13 01:05:11,917 [wrapper] supervise_pilot (15 min periods counter: 23)
[2025-10-12 21:06:05] 2025-10-13 01:05:30,780 | INFO     | PID=3060833 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 21:06:05] 2025-10-13 01:05:30,781 | INFO     | .. there are 33 such processes running
[2025-10-12 21:06:05] 2025-10-13 01:05:30,781 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 21:06:05] 2025-10-13 01:05:30,781 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 21:06:05] 2025-10-13 01:05:30,781 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 21:06:05] 2025-10-13 01:05:58,473 | INFO     | [monitor] cgroup control has ended
[2025-10-12 21:06:05] 2025-10-13 01:05:59,601 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140674369374016)>', '<ExcThread(monitor, started 140673709754112)>']
[2025-10-12 21:06:05] 2025-10-13 01:06:00,069 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 21:06:05] 2025-10-13 01:06:00,070 | INFO     | [monitor] control thread has ended
[2025-10-12 21:06:05] 2025-10-13 01:06:04,626 | INFO     | all workflow threads have been joined
[2025-10-12 21:06:05] 2025-10-13 01:06:04,626 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 21:06:05] 2025-10-13 01:06:04,626 | INFO     | traces error code: 0
[2025-10-12 21:06:05] 2025-10-13 01:06:04,627 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 21:06:05] 2025-10-13 01:06:05,038 [wrapper] ==== pilot stdout END ====
[2025-10-12 21:06:05] 2025-10-13 01:06:05,041 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 21:06:05] 2025-10-13 01:06:05,060 [wrapper] pilotpid: 3060833
[2025-10-12 21:06:05] 2025-10-13 01:06:05,087 [wrapper] Pilot exit status: 0
[2025-10-12 21:06:05] 2025-10-13 01:06:05,298 [wrapper] pandaids: 6840081261
[2025-10-12 21:06:05] 2025-10-13 01:06:05,435 [wrapper] cleanup supervisor_pilot 4122611 3060834
[2025-10-12 21:06:05] 2025-10-13 01:06:05,458 [wrapper] Test setup, not cleaning
[2025-10-12 21:06:05] 2025-10-13 01:06:05,483 [wrapper] apfmon messages muted
[2025-10-12 21:06:05] 2025-10-13 01:06:05,549 [wrapper] ==== wrapper stdout END ====
[2025-10-12 21:06:05] 2025-10-13 01:06:05,552 [wrapper] ==== wrapper stderr END ====
[2025-10-12 21:06:05]  *** Error codes and diagnostics ***
[2025-10-12 21:06:05]     "exeErrorCode": 0,
[2025-10-12 21:06:05]     "exeErrorDiag": "",
[2025-10-12 21:06:05]     "pilotErrorCode": 0,
[2025-10-12 21:06:05]     "pilotErrorDiag": "",
[2025-10-12 21:06:05]  *** Listing of results directory ***
[2025-10-12 21:06:05] total 422216
[2025-10-12 21:06:05] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 09:22 pilot3.tar.gz
[2025-10-12 21:06:05] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 09:34 queuedata.json
[2025-10-12 21:06:05] -rwx------. 1 boincer umatlas     36292 Oct 12 09:36 runpilot2-wrapper.sh
[2025-10-12 21:06:05] -rw-r--r--. 1 boincer umatlas       100 Oct 12 15:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 21:06:05] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 15:33 run_atlas
[2025-10-12 21:06:05] -rw-r--r--. 1 boincer umatlas       105 Oct 12 15:33 job.xml
[2025-10-12 21:06:05] -rw-r--r--. 2 boincer umatlas 221148283 Oct 12 15:33 EVNT.46676267._003939.pool.root.1
[2025-10-12 21:06:05] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:33 start_atlas.sh
[2025-10-12 21:06:05] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 15:33 shared
[2025-10-12 21:06:05] -rw-r--r--. 2 boincer umatlas    569683 Oct 12 15:33 input.tar.gz
[2025-10-12 21:06:05] -rw-r--r--. 1 boincer umatlas         0 Oct 12 15:33 boinc_lockfile
[2025-10-12 21:06:05] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 15:34 pandaJob.out
[2025-10-12 21:06:05] -rw-------. 1 boincer umatlas    975536 Oct 12 15:35 agis_schedconf.cvmfs.json
[2025-10-12 21:06:05] drwx------. 5 boincer umatlas      4096 Oct 12 15:35 pilot3
[2025-10-12 21:06:05] -rw-r--r--. 1 boincer umatlas      6659 Oct 12 21:02 init_data.xml
[2025-10-12 21:06:05] -rw-------. 1 boincer umatlas 201394071 Oct 12 21:03 HITS.46676269._079629.pool.root.1
[2025-10-12 21:06:05] -rw-r--r--. 1 boincer umatlas       531 Oct 12 21:03 boinc_task_state.xml
[2025-10-12 21:06:05] -rw-------. 1 boincer umatlas      1043 Oct 12 21:04 memory_monitor_summary.json
[2025-10-12 21:06:05] -rw-------. 1 boincer umatlas   1560580 Oct 12 21:04 agis_ddmendpoints.agis.ALL.json
[2025-10-12 21:06:05] -rw-------. 1 boincer umatlas    528886 Oct 12 21:04 log.46676269._079629.job.log.tgz.1
[2025-10-12 21:06:05] -rw-------. 1 boincer umatlas      7827 Oct 12 21:04 heartbeat.json
[2025-10-12 21:06:05] -rw-------. 1 boincer umatlas        95 Oct 12 21:04 pilot_heartbeat.json
[2025-10-12 21:06:05] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 21:06 boinc_mmap_file
[2025-10-12 21:06:05] -rw-r--r--. 1 boincer umatlas        28 Oct 12 21:06 wrapper_checkpoint.txt
[2025-10-12 21:06:05] -rw-------. 1 boincer umatlas      5010 Oct 12 21:06 pilotlog.txt
[2025-10-12 21:06:05] -rw-------. 1 boincer umatlas   2424094 Oct 12 21:06 log.46676269._079629.job.log.1
[2025-10-12 21:06:05] -rw-------. 1 boincer umatlas       357 Oct 12 21:06 output.list
[2025-10-12 21:06:05] -rw-r--r--. 1 boincer umatlas       620 Oct 12 21:06 runtime_log
[2025-10-12 21:06:05] -rw-------. 1 boincer umatlas   2969600 Oct 12 21:06 result.tar.gz
[2025-10-12 21:06:05] -rw-------. 1 boincer umatlas       655 Oct 12 21:06 xQHKDmKQBS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmk2jNDmiiXjLo.diag
[2025-10-12 21:06:05] -rw-r--r--. 1 boincer umatlas      8694 Oct 12 21:06 runtime_log.err
[2025-10-12 21:06:05] -rw-r--r--. 1 boincer umatlas     21223 Oct 12 21:06 stderr.txt
[2025-10-12 21:06:05] HITS file was successfully produced:
[2025-10-12 21:06:05] -rw-------. 1 boincer umatlas 201394071 Oct 12 21:03 shared/HITS.pool.root.1
[2025-10-12 21:06:05]  *** Contents of shared directory: ***
[2025-10-12 21:06:05] total 416124
[2025-10-12 21:06:05] -rw-r--r--. 2 boincer umatlas 221148283 Oct 12 15:33 ATLAS.root_0
[2025-10-12 21:06:05] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:33 start_atlas.sh
[2025-10-12 21:06:05] -rw-r--r--. 2 boincer umatlas    569683 Oct 12 15:33 input.tar.gz
[2025-10-12 21:06:05] -rw-------. 1 boincer umatlas 201394071 Oct 12 21:03 HITS.pool.root.1
[2025-10-12 21:06:05] -rw-------. 1 boincer umatlas   2969600 Oct 12 21:06 result.tar.gz
21:06:07 (3048026): run_atlas exited; CPU time 49924.051040
21:06:07 (3048026): called boinc_finish(0)

</stderr_txt>
]]>

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