Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:29:05 (3899606): wrapper (7.7.26015): starting
01:29:05 (3899606): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 01:29:05] Arguments: --nthreads 4
[2025-10-13 01:29:05] Threads: 4
[2025-10-13 01:29:05] Checking for CVMFS
[2025-10-13 01:29:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 01:29:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 01:29:06] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 01:29:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 01:29:06] 2.9.2.0 2186487 4949 99764 151641 0 56 28665969 36864000 0 130560 0 4453197 99.992 173601 1017 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 01:29:06] CVMFS is ok
[2025-10-13 01:29:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 01:29:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 01:29:06] Further information can be found at the LHC@home message board.
[2025-10-13 01:29:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 01:29:06] Checking for apptainer binary...
[2025-10-13 01:29:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 01:29:06] Running /usr/bin/apptainer --version
[2025-10-13 01:29:06] apptainer version 1.4.1-1.1
[2025-10-13 01:29:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 01:29:06] belleA253c
[2025-10-13 01:29:06] apptainer works
[2025-10-13 01:29:06] Set ATHENA_PROC_NUMBER=4
[2025-10-13 01:29:06] Set ATHENA_CORE_NUMBER=4
[2025-10-13 01:29:06] Starting ATLAS job with PandaID=6840081246
[2025-10-13 01:29:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 02:41:26]  *** The last 200 lines of the pilot log: ***
[2025-10-13 02:41:26]  scope=mc23_13p6TeV
[2025-10-13 02:41:26]  status=None
[2025-10-13 02:41:26]  status_code=0
[2025-10-13 02:41:26]  storage_token=
[2025-10-13 02:41:26]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6840081246/log.46676269._079614.job.log.tgz.1
[2025-10-13 02:41:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3e/35/log.46676269._079614.job.log.tgz.1
[2025-10-13 02:41:26]  workdir=None
[2025-10-13 02:41:26] ]
[2025-10-13 02:41:26] 2025-10-13 00:40:15,545 | INFO     | transferring file log.46676269._079614.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6840081246/log.46676269._079614.job.log.tgz.1 to /local/data/boinc/
[2025-10-13 02:41:26] 2025-10-13 00:40:15,545 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6840081246/log.46676269._079614.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0796
[2025-10-13 02:41:26] 2025-10-13 00:40:15,563 | INFO     | adding to output.list: log.46676269._079614.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3e/35/log.46676269._079614.job.log.tg
[2025-10-13 02:41:26] 2025-10-13 00:40:15,564 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 02:41:26] 2025-10-13 00:40:15,564 | INFO     | summary of transferred files:
[2025-10-13 02:41:26] 2025-10-13 00:40:15,564 | INFO     |  -- lfn=log.46676269._079614.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 02:41:26] 2025-10-13 00:40:15,564 | INFO     | stage-out finished correctly
[2025-10-13 02:41:26] 2025-10-13 00:40:15,583 | INFO     | time since job start (4261s) is within the limit (172800.0s)
[2025-10-13 02:41:26] 2025-10-13 00:40:16,320 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 02:41:26] 2025-10-13 00:40:16,869 | INFO     | monitor loop #329: job 0:6840081246 is in state 'finished'
[2025-10-13 02:41:26] 2025-10-13 00:40:16,869 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 02:41:26] 2025-10-13 00:40:17,589 | INFO     | time since job start (4263s) is within the limit (172800.0s)
[2025-10-13 02:41:26] 2025-10-13 00:40:18,425 | INFO     | job 6840081246 has state=finished
[2025-10-13 02:41:26] 2025-10-13 00:40:18,425 | INFO     | preparing for final server update for job 6840081246 in state='finished'
[2025-10-13 02:41:26] 2025-10-13 00:40:18,426 | INFO     | this job has now completed (state=finished)
[2025-10-13 02:41:26] 2025-10-13 00:40:18,426 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 02:41:26] 2025-10-13 00:40:18,426 | INFO     | log transfer has been attempted: DONE
[2025-10-13 02:41:26] 2025-10-13 00:40:18,426 | INFO     | job 6840081246 has finished - writing final server update
[2025-10-13 02:41:26] 2025-10-13 00:40:18,426 | INFO     | total number of processed events: 400 (read)
[2025-10-13 02:41:26] 2025-10-13 00:40:18,427 | INFO     | executing command: lscpu
[2025-10-13 02:41:26] 2025-10-13 00:40:18,448 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 02:41:26] 2025-10-13 00:40:19,372 | INFO     | monitor loop #330: job 0:6840081246 is in state 'finished'
[2025-10-13 02:41:26] 2025-10-13 00:40:19,372 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 02:41:26] 2025-10-13 00:40:19,595 | INFO     | time since job start (4265s) is within the limit (172800.0s)
[2025-10-13 02:41:26] 2025-10-13 00:40:21,600 | INFO     | time since job start (4267s) is within the limit (172800.0s)
[2025-10-13 02:41:26] 2025-10-13 00:40:21,875 | INFO     | monitor loop #331: job 0:6840081246 is in state 'finished'
[2025-10-13 02:41:26] 2025-10-13 00:40:21,875 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 02:41:26] 2025-10-13 00:40:22,690 | INFO     | PID=3903383 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 02:41:26] 2025-10-13 00:40:23,449 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 02:41:26] 2025-10-13 00:40:23,450 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3397.891375
[2025-10-13 02:41:26] 2025-10-13 00:40:23,452 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6840081246/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 02:41:26] 2025-10-13 00:40:23,452 | INFO     | extracted standard info from prmon json
[2025-10-13 02:41:26] 2025-10-13 00:40:23,452 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 02:41:26] 2025-10-13 00:40:23,452 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 02:41:26] 2025-10-13 00:40:23,452 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 02:41:26] 2025-10-13 00:40:23,452 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 02:41:26] 2025-10-13 00:40:23,453 | INFO     | fitting pss+swap vs Time
[2025-10-13 02:41:26] 2025-10-13 00:40:23,453 | INFO     | sum of square deviations: 77515872.0
[2025-10-13 02:41:26] 2025-10-13 00:40:23,453 | INFO     | sum of deviations: -8325485631.000001
[2025-10-13 02:41:26] 2025-10-13 00:40:23,453 | INFO     | mean x: 1760313973.0
[2025-10-13 02:41:26] 2025-10-13 00:40:23,453 | INFO     | mean y: 2623167.5555555555
[2025-10-13 02:41:26] 2025-10-13 00:40:23,453 | INFO     | -- intersect: 189066724623.57764
[2025-10-13 02:41:26] 2025-10-13 00:40:23,453 | INFO     | intersect: 189066724623.57764
[2025-10-13 02:41:26] 2025-10-13 00:40:23,454 | INFO     | chi2: 0.0922585670422297
[2025-10-13 02:41:26] 2025-10-13 00:40:23,454 | INFO     | -- intersect: 189066724623.57764
[2025-10-13 02:41:26] 2025-10-13 00:40:23,454 | INFO     | current memory leak: -107.40 B/s (using 63 data points, chi2=0.09)
[2025-10-13 02:41:26] 2025-10-13 00:40:23,454 | INFO     | could have reported an average CPU frequency of 3635 MHz (6 samples)
[2025-10-13 02:41:26] 2025-10-13 00:40:23,454 | INFO     | ..............................
[2025-10-13 02:41:26] 2025-10-13 00:40:23,454 | INFO     | . Timing measurements:
[2025-10-13 02:41:26] 2025-10-13 00:40:23,454 | INFO     | . get job = 0 s
[2025-10-13 02:41:26] 2025-10-13 00:40:23,454 | INFO     | . initial setup = 1 s
[2025-10-13 02:41:26] 2025-10-13 00:40:23,454 | INFO     | . payload setup = 4 s
[2025-10-13 02:41:26] 2025-10-13 00:40:23,454 | INFO     | . stage-in = 0 s
[2025-10-13 02:41:26] 2025-10-13 00:40:23,454 | INFO     | . payload execution = 4238 s
[2025-10-13 02:41:26] 2025-10-13 00:40:23,454 | INFO     | . stage-out = 0 s
[2025-10-13 02:41:26] 2025-10-13 00:40:23,454 | INFO     | . log creation = 0 s
[2025-10-13 02:41:26] 2025-10-13 00:40:23,454 | INFO     | ..............................
[2025-10-13 02:41:26] 2025-10-13 00:40:23,589 | INFO     | 
[2025-10-13 02:41:26] 2025-10-13 00:40:23,589 | INFO     | job summary report
[2025-10-13 02:41:26] 2025-10-13 00:40:23,589 | INFO     | --------------------------------------------------
[2025-10-13 02:41:26] 2025-10-13 00:40:23,589 | INFO     | PanDA job id: 6840081246
[2025-10-13 02:41:26] 2025-10-13 00:40:23,589 | INFO     | task id: 46676269
[2025-10-13 02:41:26] 2025-10-13 00:40:23,589 | INFO     | errors: (none)
[2025-10-13 02:41:26] 2025-10-13 00:40:23,589 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 02:41:26] 2025-10-13 00:40:23,589 | INFO     | pilot state: finished 
[2025-10-13 02:41:26] 2025-10-13 00:40:23,589 | INFO     | transexitcode: 0
[2025-10-13 02:41:26] 2025-10-13 00:40:23,589 | INFO     | exeerrorcode: 0
[2025-10-13 02:41:26] 2025-10-13 00:40:23,590 | INFO     | exeerrordiag: 
[2025-10-13 02:41:26] 2025-10-13 00:40:23,590 | INFO     | exitcode: 0
[2025-10-13 02:41:26] 2025-10-13 00:40:23,590 | INFO     | exitmsg: OK
[2025-10-13 02:41:26] 2025-10-13 00:40:23,590 | INFO     | cpuconsumptiontime: 16013 s
[2025-10-13 02:41:26] 2025-10-13 00:40:23,590 | INFO     | nevents: 400
[2025-10-13 02:41:26] 2025-10-13 00:40:23,590 | INFO     | neventsw: 0
[2025-10-13 02:41:26] 2025-10-13 00:40:23,590 | INFO     | pid: 3909942
[2025-10-13 02:41:26] 2025-10-13 00:40:23,590 | INFO     | pgrp: 3909942
[2025-10-13 02:41:26] 2025-10-13 00:40:23,590 | INFO     | corecount: 4
[2025-10-13 02:41:26] 2025-10-13 00:40:23,590 | INFO     | event service: False
[2025-10-13 02:41:26] 2025-10-13 00:40:23,590 | INFO     | sizes: {0: 2348854, 3: 2349116, 11: 2349144, 4246: 2375305, 4247: 2384309, 4248: 2384365, 4255: 2384687}
[2025-10-13 02:41:26] 2025-10-13 00:40:23,590 | INFO     | --------------------------------------------------
[2025-10-13 02:41:26] 2025-10-13 00:40:23,590 | INFO     | 
[2025-10-13 02:41:26] 2025-10-13 00:40:23,590 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-13 02:41:26] 2025-10-13 00:40:23,610 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 02:41:26] 2025-10-13 00:40:23,611 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 02:41:26] 2025-10-13 00:40:23,611 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 02:41:26] 2025-10-13 00:40:23,611 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 02:41:26] 2025-10-13 00:40:23,611 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 02:41:26] 2025-10-13 00:40:23,611 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 02:41:26] 2025-10-13 00:40:23,611 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 02:41:26] 2025-10-13 00:40:23,611 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 02:41:26] 2025-10-13 00:40:23,611 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 02:41:26] 2025-10-13 00:40:23,611 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 02:41:26] 2025-10-13 00:40:23,611 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 02:41:26] 2025-10-13 00:40:23,611 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 02:41:26] 2025-10-13 00:40:23,611 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 02:41:26] 2025-10-13 00:40:23,611 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 02:41:26] 2025-10-13 00:40:23,611 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 02:41:26] 2025-10-13 00:40:23,611 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 02:41:26] 2025-10-13 00:40:23,611 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 02:41:26] 2025-10-13 00:40:23,611 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 02:41:26] 2025-10-13 00:40:23,611 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 02:41:26] 2025-10-13 00:40:23,611 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 02:41:26] 2025-10-13 00:40:23,611 | INFO     | job 6840081246 has completed (purged errors)
[2025-10-13 02:41:26] 2025-10-13 00:40:23,612 | INFO     | overall cleanup function is called
[2025-10-13 02:41:26] 2025-10-13 00:40:24,618 | INFO     | --- collectZombieJob: --- 10, [3909942]
[2025-10-13 02:41:26] 2025-10-13 00:40:24,618 | INFO     | zombie collector waiting for pid 3909942
[2025-10-13 02:41:26] 2025-10-13 00:40:24,619 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 02:41:26] 2025-10-13 00:40:24,619 | INFO     | collected zombie processes
[2025-10-13 02:41:26] 2025-10-13 00:40:24,619 | INFO     | will attempt to kill all subprocesses of pid=3909942
[2025-10-13 02:41:26] 2025-10-13 00:40:24,663 | INFO     | process IDs to be killed: [3909942] (in reverse order)
[2025-10-13 02:41:26] 2025-10-13 00:40:24,697 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 02:41:26] 2025-10-13 00:40:24,697 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 02:41:26] 2025-10-13 00:40:24,699 | INFO     | did not find any defunct processes belonging to 3909942
[2025-10-13 02:41:26] 2025-10-13 00:40:24,700 | INFO     | did not find any defunct processes belonging to 3909942
[2025-10-13 02:41:26] 2025-10-13 00:40:24,700 | INFO     | ready for new job
[2025-10-13 02:41:26] 2025-10-13 00:40:24,700 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 02:41:26] 2025-10-13 00:40:24,701 | INFO     | ***************************************
[2025-10-13 02:41:26] 2025-10-13 00:40:24,701 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 02:41:26] 2025-10-13 00:40:24,701 | INFO     | ***************************************
[2025-10-13 02:41:26] 2025-10-13 00:40:24,701 | INFO     | 
[2025-10-13 02:41:26] 2025-10-13 00:40:24,702 | INFO     | architecture information:
[2025-10-13 02:41:26] 2025-10-13 00:40:24,702 | INFO     | executing command: cat /etc/os-release
[2025-10-13 02:41:26] 2025-10-13 00:40:24,715 | INFO     | cat /etc/os-release:
[2025-10-13 02:41:26] NAME="CentOS Linux"
[2025-10-13 02:41:26] VERSION="7 (Core)"
[2025-10-13 02:41:26] ID="centos"
[2025-10-13 02:41:26] ID_LIKE="rhel fedora"
[2025-10-13 02:41:26] VERSION_ID="7"
[2025-10-13 02:41:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 02:41:26] ANSI_COLOR="0;31"
[2025-10-13 02:41:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 02:41:26] HOME_URL="https://www.centos.org/"
[2025-10-13 02:41:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 02:41:26] 
[2025-10-13 02:41:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 02:41:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 02:41:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 02:41:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 02:41:26] 
[2025-10-13 02:41:26] 2025-10-13 00:40:24,716 | INFO     | ***************************************
[2025-10-13 02:41:26] 2025-10-13 00:40:25,219 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 02:41:26] 2025-10-13 00:40:25,236 | INFO     | sufficient remaining disk space (331188535296 B)
[2025-10-13 02:41:26] 2025-10-13 00:40:25,237 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 02:41:26] 2025-10-13 00:40:25,237 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 02:41:26] 2025-10-13 00:40:25,237 | INFO     | update_server=False
[2025-10-13 02:41:26] 2025-10-13 00:40:25,237 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 02:41:26] 2025-10-13 00:40:25,237 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 02:41:26] 2025-10-13 00:40:25,384 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 02:41:26] 2025-10-13 00:40:25,385 | INFO     | aborting loop
[2025-10-13 02:41:26] 2025-10-13 00:40:25,568 | INFO     | all payload control threads have been joined
[2025-10-13 02:41:26] 2025-10-13 00:40:25,808 | INFO     | all job control threads have been joined
[2025-10-13 02:41:26] 2025-10-13 00:40:25,921 | INFO     | all data control threads have been joined
[2025-10-13 02:41:26] 2025-10-13 00:40:26,119 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 02:41:26] 2025-10-13 00:40:26,243 | INFO     | [job] queue monitor thread has finished
[2025-10-13 02:41:26] 2025-10-13 00:40:26,243 | INFO     | [job] retrieve thread has finished
[2025-10-13 02:41:26] 2025-10-13 00:40:26,251 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 02:41:26] 2025-10-13 00:40:26,390 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 02:41:26] 2025-10-13 00:40:26,390 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 02:41:26] 2025-10-13 00:40:26,390 | INFO     | [job] job monitor thread has finished
[2025-10-13 02:41:26] 2025-10-13 00:40:26,573 | INFO     | [payload] control thread has finished
[2025-10-13 02:41:26] 2025-10-13 00:40:26,813 | INFO     | [job] control thread has finished
[2025-10-13 02:41:26] 2025-10-13 00:40:26,875 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 02:41:26] 2025-10-13 00:40:26,892 | INFO     | [data] copytool_in thread has finished
[2025-10-13 02:41:26] 2025-10-13 00:40:26,927 | INFO     | [data] control thread has finished
[2025-10-13 02:41:26] 2025-10-13 00:40:27,129 | INFO     | [payload] validate_post thread has finished
[2025-10-13 02:41:26] 2025-10-13 00:40:27,510 | INFO     | [payload] failed_post thread has finished
[2025-10-13 02:41:26] 2025-10-13 00:40:27,673 | INFO     | [job] validate thread has finished
[2025-10-13 02:41:26] 2025-10-13 00:40:28,125 | INFO     | [data] copytool_out thread has finished
[2025-10-13 02:41:26] 2025-10-13 00:40:30,882 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 02:41:26] 2025-10-13 00:40:35,704 | INFO     | job.realtimelogging is not enabled
[2025-10-13 02:41:26] 2025-10-13 00:40:36,709 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 02:41:26] 2025-10-13 00:40:54,810 | INFO     | PID=3903383 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 02:41:26] 2025-10-13 00:40:54,811 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 02:41:26] 2025-10-13 00:40:54,811 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 02:41:26] 2025-10-13 00:40:54,811 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 02:41:26] 2025-10-13 00:41:19,708 | INFO     | [monitor] cgroup control has ended
[2025-10-13 02:41:26] 2025-10-13 00:41:21,546 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139910378440512)>', '<ExcThread(monitor, started 139909717268224)>']
[2025-10-13 02:41:26] 2025-10-13 00:41:21,955 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 02:41:26] 2025-10-13 00:41:21,955 | INFO     | [monitor] control thread has ended
[2025-10-13 02:41:26] 2025-10-13 00:41:26,572 | INFO     | all workflow threads have been joined
[2025-10-13 02:41:26] 2025-10-13 00:41:26,572 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 02:41:26] 2025-10-13 00:41:26,573 | INFO     | traces error code: 0
[2025-10-13 02:41:26] 2025-10-13 00:41:26,573 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 02:41:26] 2025-10-13 00:41:26,654 [wrapper] ==== pilot stdout END ====
[2025-10-13 02:41:26] 2025-10-13 00:41:26,658 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 02:41:26] 2025-10-13 00:41:26,662 [wrapper] pilotpid: 3903383
[2025-10-13 02:41:26] 2025-10-13 00:41:26,666 [wrapper] Pilot exit status: 0
[2025-10-13 02:41:26] 2025-10-13 00:41:26,678 [wrapper] pandaids: 6840081246
[2025-10-13 02:41:26] 2025-10-13 00:41:26,702 [wrapper] cleanup supervisor_pilot 3919641 3903384
[2025-10-13 02:41:26] 2025-10-13 00:41:26,706 [wrapper] Test setup, not cleaning
[2025-10-13 02:41:26] 2025-10-13 00:41:26,710 [wrapper] apfmon messages muted
[2025-10-13 02:41:26] 2025-10-13 00:41:26,714 [wrapper] ==== wrapper stdout END ====
[2025-10-13 02:41:26] 2025-10-13 00:41:26,718 [wrapper] ==== wrapper stderr END ====
[2025-10-13 02:41:26]  *** Error codes and diagnostics ***
[2025-10-13 02:41:26]     "exeErrorCode": 0,
[2025-10-13 02:41:26]     "exeErrorDiag": "",
[2025-10-13 02:41:26]     "pilotErrorCode": 0,
[2025-10-13 02:41:26]     "pilotErrorDiag": "",
[2025-10-13 02:41:26]  *** Listing of results directory ***
[2025-10-13 02:41:26] total 409524
[2025-10-13 02:41:26] -rw-r--r-- 1 boinc boinc    557409 Oct 12 15:22 pilot3.tar.gz
[2025-10-13 02:41:26] -rw-r--r-- 1 boinc boinc      5112 Oct 12 15:34 queuedata.json
[2025-10-13 02:41:26] -rwx------ 1 boinc boinc     36292 Oct 12 15:35 runpilot2-wrapper.sh
[2025-10-13 02:41:26] -rw-r--r-- 1 boinc boinc       100 Oct 13 01:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 02:41:26] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 01:29 run_atlas
[2025-10-13 02:41:26] -rw-r--r-- 1 boinc boinc       105 Oct 13 01:29 job.xml
[2025-10-13 02:41:26] -rw-r--r-- 2 boinc boinc 221148283 Oct 13 01:29 EVNT.46676267._003939.pool.root.1
[2025-10-13 02:41:26] -rw-r--r-- 2 boinc boinc    569680 Oct 13 01:29 input.tar.gz
[2025-10-13 02:41:26] -rw-r--r-- 2 boinc boinc     15120 Oct 13 01:29 start_atlas.sh
[2025-10-13 02:41:26] drwxrwx--x 2 boinc boinc      4096 Oct 13 01:29 shared
[2025-10-13 02:41:26] -rw-r--r-- 1 boinc boinc         0 Oct 13 01:29 boinc_setup_complete
[2025-10-13 02:41:26] -rw-r--r-- 1 boinc boinc      6381 Oct 13 01:29 init_data.xml
[2025-10-13 02:41:26] -rw-r--r-- 1 boinc boinc         0 Oct 13 01:29 boinc_lockfile
[2025-10-13 02:41:26] -rw-r--r-- 1 boinc boinc      2547 Oct 13 01:29 pandaJob.out
[2025-10-13 02:41:26] -rw------- 1 boinc boinc    975603 Oct 13 01:29 agis_schedconf.cvmfs.json
[2025-10-13 02:41:26] -rw------- 1 boinc boinc   1560580 Oct 13 01:29 agis_ddmendpoints.agis.ALL.json
[2025-10-13 02:41:26] drwx------ 5 boinc boinc      4096 Oct 13 01:29 pilot3
[2025-10-13 02:41:26] -rw-r--r-- 1 boinc boinc       529 Oct 13 02:39 boinc_task_state.xml
[2025-10-13 02:41:26] -rw------- 1 boinc boinc 192536901 Oct 13 02:39 HITS.46676269._079614.pool.root.1
[2025-10-13 02:41:26] -rw------- 1 boinc boinc      1020 Oct 13 02:40 memory_monitor_summary.json
[2025-10-13 02:41:26] -rw------- 1 boinc boinc    243487 Oct 13 02:40 log.46676269._079614.job.log.tgz.1
[2025-10-13 02:41:26] -rw------- 1 boinc boinc      7772 Oct 13 02:40 heartbeat.json
[2025-10-13 02:41:26] -rw------- 1 boinc boinc        95 Oct 13 02:40 pilot_heartbeat.json
[2025-10-13 02:41:26] -rw-r--r-- 1 boinc boinc        27 Oct 13 02:41 wrapper_checkpoint.txt
[2025-10-13 02:41:26] -rw-r--r-- 1 boinc boinc      8192 Oct 13 02:41 boinc_mmap_file
[2025-10-13 02:41:26] -rw------- 1 boinc boinc      4824 Oct 13 02:41 pilotlog.txt
[2025-10-13 02:41:26] -rw------- 1 boinc boinc    633976 Oct 13 02:41 log.46676269._079614.job.log.1
[2025-10-13 02:41:26] -rw------- 1 boinc boinc       357 Oct 13 02:41 output.list
[2025-10-13 02:41:26] -rw-r--r-- 1 boinc boinc       620 Oct 13 02:41 runtime_log
[2025-10-13 02:41:26] -rw------- 1 boinc boinc    901120 Oct 13 02:41 result.tar.gz
[2025-10-13 02:41:26] -rw-r--r-- 1 boinc boinc      8797 Oct 13 02:41 runtime_log.err
[2025-10-13 02:41:26] -rw------- 1 boinc boinc       662 Oct 13 02:41 DuJNDmLPBS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJ2jNDmFtsIMn.diag
[2025-10-13 02:41:26] -rw-r--r-- 1 boinc boinc     22014 Oct 13 02:41 stderr.txt
[2025-10-13 02:41:26] HITS file was successfully produced:
[2025-10-13 02:41:26] -rw------- 1 boinc boinc 192536901 Oct 13 02:39 shared/HITS.pool.root.1
[2025-10-13 02:41:26]  *** Contents of shared directory: ***
[2025-10-13 02:41:26] total 405460
[2025-10-13 02:41:26] -rw-r--r-- 2 boinc boinc 221148283 Oct 13 01:29 ATLAS.root_0
[2025-10-13 02:41:26] -rw-r--r-- 2 boinc boinc    569680 Oct 13 01:29 input.tar.gz
[2025-10-13 02:41:26] -rw-r--r-- 2 boinc boinc     15120 Oct 13 01:29 start_atlas.sh
[2025-10-13 02:41:26] -rw------- 1 boinc boinc 192536901 Oct 13 02:39 HITS.pool.root.1
[2025-10-13 02:41:26] -rw------- 1 boinc boinc    901120 Oct 13 02:41 result.tar.gz
02:41:28 (3899606): run_atlas exited; CPU time 16025.497991
02:41:28 (3899606): called boinc_finish(0)

</stderr_txt>
]]>

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