Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:28:41 (3291412): wrapper (7.7.26015): starting
01:28:41 (3291412): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 01:28:41] Arguments: --nthreads 3
[2025-10-13 01:28:41] Threads: 3
[2025-10-13 01:28:41] Checking for CVMFS
[2025-10-13 01:28:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 01:28:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 01:28:41] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 01:28:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 01:28:41] 2.9.2.0 2127501 3742 80588 151641 0 57 29063090 36864000 0 130560 0 3059363 99.987 256165 1493 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 01:28:41] CVMFS is ok
[2025-10-13 01:28:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 01:28:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 01:28:41] Further information can be found at the LHC@home message board.
[2025-10-13 01:28:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 01:28:41] Checking for apptainer binary...
[2025-10-13 01:28:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 01:28:41] Running /usr/bin/apptainer --version
[2025-10-13 01:28:41] apptainer version 1.4.1-1.1
[2025-10-13 01:28:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 01:28:41] thA385
[2025-10-13 01:28:41] apptainer works
[2025-10-13 01:28:42] Set ATHENA_PROC_NUMBER=3
[2025-10-13 01:28:42] Set ATHENA_CORE_NUMBER=3
[2025-10-13 01:28:42] Starting ATLAS job with PandaID=6839821833
[2025-10-13 01:28:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 02:51:22]  *** The last 200 lines of the pilot log: ***
[2025-10-13 02:51:22] 2025-10-13 00:50:52,072 | INFO     | all payload control threads have been joined
[2025-10-13 02:51:22] 2025-10-13 00:50:52,216 | INFO     | [job] retrieve thread has finished
[2025-10-13 02:51:22] 2025-10-13 00:50:52,216 | INFO     | [job] queue monitor thread has finished
[2025-10-13 02:51:22] 2025-10-13 00:50:52,308 | INFO     | [job] control thread has finished
[2025-10-13 02:51:22] 2025-10-13 00:50:52,311 | INFO     | all data control threads have been joined
[2025-10-13 02:51:22] 2025-10-13 00:50:52,367 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 02:51:22] 2025-10-13 00:50:52,396 | INFO     | [data] copytool_in thread has finished
[2025-10-13 02:51:22] 2025-10-13 00:50:52,402 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 02:51:22] 2025-10-13 00:50:52,703 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 02:51:22] 2025-10-13 00:50:52,719 | INFO     | [job] job monitor thread has finished
[2025-10-13 02:51:22] 2025-10-13 00:50:52,827 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 02:51:22] 2025-10-13 00:50:52,934 | INFO     | [job] validate thread has finished
[2025-10-13 02:51:22] 2025-10-13 00:50:53,078 | INFO     | [payload] control thread has finished
[2025-10-13 02:51:22] 2025-10-13 00:50:53,135 | INFO     | [monitor] cgroup control has ended
[2025-10-13 02:51:22] 2025-10-13 00:50:53,226 | INFO     | [payload] failed_post thread has finished
[2025-10-13 02:51:22] 2025-10-13 00:50:53,317 | INFO     | [data] control thread has finished
[2025-10-13 02:51:22] 2025-10-13 00:50:53,409 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 02:51:22] 2025-10-13 00:50:53,810 | INFO     | [payload] validate_post thread has finished
[2025-10-13 02:51:22] 2025-10-13 00:50:54,408 | INFO     | [data] copytool_out thread has finished
[2025-10-13 02:51:22] 2025-10-13 00:50:57,416 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 02:51:22] 2025-10-13 00:51:01,619 | INFO     | job.realtimelogging is not enabled
[2025-10-13 02:51:22] 2025-10-13 00:51:02,620 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 02:51:22] 2025-10-13 00:51:04,554 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139744829663040)>', '<ExcThread(monitor, started 139744159700736)>']
[2025-10-13 02:51:22] 2025-10-13 00:51:09,555 | INFO     | all workflow threads have been joined
[2025-10-13 02:51:22] 2025-10-13 00:51:09,555 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 02:51:22] 2025-10-13 00:51:09,555 | INFO     | traces error code: 0
[2025-10-13 02:51:22] 2025-10-13 00:51:09,555 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 02:51:22] 2025-10-13 00:51:21,950 | INFO     | PID=3295130 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 02:51:22] 2025-10-13 00:51:21,950 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 02:51:22] 2025-10-13 00:51:21,950 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 02:51:22] 2025-10-13 00:51:21,950 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 02:51:22] 2025-10-13 00:51:21,950 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 02:51:22] 2025-10-13 00:51:21,950 | INFO     | [monitor] control thread has ended
[2025-10-13 02:51:22] 2025-10-13 00:51:21,998 [wrapper] ==== pilot stdout END ====
[2025-10-13 02:51:22] 2025-10-13 00:51:22,000 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 02:51:22] 2025-10-13 00:51:22,002 [wrapper] pilotpid: 3295130
[2025-10-13 02:51:22] 2025-10-13 00:51:22,005 [wrapper] Pilot exit status: 0
[2025-10-13 02:51:22] 2025-10-13 00:51:22,012 [wrapper] pandaids: 6839821833
[2025-10-13 02:51:22] 2025-10-13 00:51:22,030 [wrapper] cleanup supervisor_pilot 3313687 3295131
[2025-10-13 02:51:22] 2025-10-13 00:51:22,033 [wrapper] Test setup, not cleaning
[2025-10-13 02:51:22] 2025-10-13 00:51:22,035 [wrapper] apfmon messages muted
[2025-10-13 02:51:22] 2025-10-13 00:51:22,037 [wrapper] ==== wrapper stdout END ====
[2025-10-13 02:51:22] 2025-10-13 00:51:22,040 [wrapper] ==== wrapper stderr END ====
[2025-10-13 02:51:22]  *** Error codes and diagnostics ***
[2025-10-13 02:51:22]     "exeErrorCode": 0,
[2025-10-13 02:51:22]     "exeErrorDiag": "",
[2025-10-13 02:51:22]     "pilotErrorCode": 0,
[2025-10-13 02:51:22]     "pilotErrorDiag": "",
[2025-10-13 02:51:22]  *** Listing of results directory ***
[2025-10-13 02:51:22] total 409264
[2025-10-13 02:51:22] -rw-r--r-- 1 boinc boinc    557409 Oct 12 11:04 pilot3.tar.gz
[2025-10-13 02:51:22] -rw-r--r-- 1 boinc boinc      5112 Oct 12 11:11 queuedata.json
[2025-10-13 02:51:22] -rwx------ 1 boinc boinc     36292 Oct 12 11:12 runpilot2-wrapper.sh
[2025-10-13 02:51:22] -rw-r--r-- 1 boinc boinc       100 Oct 13 01:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 02:51:22] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 01:28 run_atlas
[2025-10-13 02:51:22] -rw-r--r-- 1 boinc boinc       105 Oct 13 01:28 job.xml
[2025-10-13 02:51:22] -rw-r--r-- 2 boinc boinc 219511036 Oct 13 01:28 EVNT.46676267._003566.pool.root.1
[2025-10-13 02:51:22] -rw-r--r-- 2 boinc boinc    569686 Oct 13 01:28 input.tar.gz
[2025-10-13 02:51:22] -rw-r--r-- 2 boinc boinc     15120 Oct 13 01:28 start_atlas.sh
[2025-10-13 02:51:22] drwxrwx--x 2 boinc boinc      4096 Oct 13 01:28 shared
[2025-10-13 02:51:22] -rw-r--r-- 1 boinc boinc         0 Oct 13 01:28 boinc_setup_complete
[2025-10-13 02:51:22] -rw-r--r-- 1 boinc boinc      6446 Oct 13 01:28 init_data.xml
[2025-10-13 02:51:22] -rw-r--r-- 1 boinc boinc         0 Oct 13 01:28 boinc_lockfile
[2025-10-13 02:51:22] -rw-r--r-- 1 boinc boinc      2549 Oct 13 01:28 pandaJob.out
[2025-10-13 02:51:22] -rw------- 1 boinc boinc    975603 Oct 13 01:28 agis_schedconf.cvmfs.json
[2025-10-13 02:51:22] -rw------- 1 boinc boinc   1560580 Oct 13 01:28 agis_ddmendpoints.agis.ALL.json
[2025-10-13 02:51:22] drwx------ 5 boinc boinc      4096 Oct 13 01:28 pilot3
[2025-10-13 02:51:22] -rw------- 1 boinc boinc 193717460 Oct 13 02:49 HITS.46676269._075154.pool.root.1
[2025-10-13 02:51:22] -rw-r--r-- 1 boinc boinc       529 Oct 13 02:49 boinc_task_state.xml
[2025-10-13 02:51:22] -rw------- 1 boinc boinc      1017 Oct 13 02:50 memory_monitor_summary.json
[2025-10-13 02:51:22] -rw------- 1 boinc boinc    263410 Oct 13 02:50 log.46676269._075154.job.log.tgz.1
[2025-10-13 02:51:22] -rw------- 1 boinc boinc      7768 Oct 13 02:50 heartbeat.json
[2025-10-13 02:51:22] -rw-r--r-- 1 boinc boinc      8192 Oct 13 02:50 boinc_mmap_file
[2025-10-13 02:51:22] -rw-r--r-- 1 boinc boinc        27 Oct 13 02:50 wrapper_checkpoint.txt
[2025-10-13 02:51:22] -rw------- 1 boinc boinc       747 Oct 13 02:51 pilotlog.txt
[2025-10-13 02:51:22] -rw------- 1 boinc boinc        95 Oct 13 02:51 pilot_heartbeat.json
[2025-10-13 02:51:22] -rw------- 1 boinc boinc    724616 Oct 13 02:51 log.46676269._075154.job.log.1
[2025-10-13 02:51:22] -rw------- 1 boinc boinc       357 Oct 13 02:51 output.list
[2025-10-13 02:51:22] -rw-r--r-- 1 boinc boinc       620 Oct 13 02:51 runtime_log
[2025-10-13 02:51:22] -rw------- 1 boinc boinc   1003520 Oct 13 02:51 result.tar.gz
[2025-10-13 02:51:22] -rw-r--r-- 1 boinc boinc      8777 Oct 13 02:51 runtime_log.err
[2025-10-13 02:51:22] -rw------- 1 boinc boinc       658 Oct 13 02:51 7XpMDmeI7R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmdJjNDmlPrbWn.diag
[2025-10-13 02:51:22] -rw-r--r-- 1 boinc boinc      6860 Oct 13 02:51 stderr.txt
[2025-10-13 02:51:22] HITS file was successfully produced:
[2025-10-13 02:51:22] -rw------- 1 boinc boinc 193717460 Oct 13 02:49 shared/HITS.pool.root.1
[2025-10-13 02:51:22]  *** Contents of shared directory: ***
[2025-10-13 02:51:22] total 405112
[2025-10-13 02:51:22] -rw-r--r-- 2 boinc boinc 219511036 Oct 13 01:28 ATLAS.root_0
[2025-10-13 02:51:22] -rw-r--r-- 2 boinc boinc    569686 Oct 13 01:28 input.tar.gz
[2025-10-13 02:51:22] -rw-r--r-- 2 boinc boinc     15120 Oct 13 01:28 start_atlas.sh
[2025-10-13 02:51:22] -rw------- 1 boinc boinc 193717460 Oct 13 02:49 HITS.pool.root.1
[2025-10-13 02:51:22] -rw------- 1 boinc boinc   1003520 Oct 13 02:51 result.tar.gz
02:51:23 (3291412): run_atlas exited; CPU time 13996.465705
02:51:23 (3291412): called boinc_finish(0)

</stderr_txt>
]]>

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