Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:55:05 (2158774): wrapper (7.7.26015): starting
12:55:05 (2158774): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 12:55:05] Arguments: --nthreads 8
[2025-10-12 12:55:05] Threads: 8
[2025-10-12 12:55:05] Checking for CVMFS
[2025-10-12 12:55:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 12:55:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 12:55:06] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 12:55:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 12:55:07] 2.13.2.0 5112 5946 136208 151627 0 326 38652281 40960001 21011 16776704 0 18959446 99.888 4126088 28690 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 12:55:07] CVMFS is ok
[2025-10-12 12:55:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 12:55:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 12:55:07] Further information can be found at the LHC@home message board.
[2025-10-12 12:55:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 12:55:07] Checking for apptainer binary...
[2025-10-12 12:55:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 12:55:07] Running /usr/bin/apptainer --version
[2025-10-12 12:55:07] apptainer version 1.4.3-1.el9
[2025-10-12 12:55:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 12:55:08] c-212-2.aglt2.org
[2025-10-12 12:55:08] apptainer works
[2025-10-12 12:55:08] Set ATHENA_PROC_NUMBER=8
[2025-10-12 12:55:08] Set ATHENA_CORE_NUMBER=8
[2025-10-12 12:55:08] Starting ATLAS job with PandaID=6839821408
[2025-10-12 12:55:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 16:09:04]  *** The last 200 lines of the pilot log: ***
[2025-10-12 16:09:04] 2025-10-12 20:08:07,401 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 16:09:04] 2025-10-12 20:08:07,401 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 16:09:04] 2025-10-12 20:08:07,406 | INFO     | fitting pss+swap vs Time
[2025-10-12 16:09:04] 2025-10-12 20:08:07,407 | INFO     | sum of square deviations: 2093403134.359791
[2025-10-12 16:09:04] 2025-10-12 20:08:07,408 | INFO     | sum of deviations: 26865760846.539677
[2025-10-12 16:09:04] 2025-10-12 20:08:07,408 | INFO     | mean x: 1760293931.058201
[2025-10-12 16:09:04] 2025-10-12 20:08:07,408 | INFO     | mean y: 2458277.587301587
[2025-10-12 16:09:04] 2025-10-12 20:08:07,408 | INFO     | -- intersect: -22588334195.782936
[2025-10-12 16:09:04] 2025-10-12 20:08:07,408 | INFO     | intersect: -22588334195.782936
[2025-10-12 16:09:04] 2025-10-12 20:08:07,427 | INFO     | chi2: 2.648232926295503
[2025-10-12 16:09:04] 2025-10-12 20:08:07,428 | INFO     | sum of square deviations: 1931617409.3423827
[2025-10-12 16:09:04] 2025-10-12 20:08:07,428 | INFO     | sum of deviations: 38501519112.01632
[2025-10-12 16:09:04] 2025-10-12 20:08:07,429 | INFO     | mean x: 1760293778.5597825
[2025-10-12 16:09:04] 2025-10-12 20:08:07,429 | INFO     | mean y: 2468991.407608696
[2025-10-12 16:09:04] 2025-10-12 20:08:07,429 | INFO     | -- intersect: -35084181310.14278
[2025-10-12 16:09:04] 2025-10-12 20:08:07,429 | INFO     | intersect: -35084181310.14278
[2025-10-12 16:09:04] 2025-10-12 20:08:07,429 | INFO     | chi2: 1.8721795996914676
[2025-10-12 16:09:04] 2025-10-12 20:08:07,429 | INFO     | current chi2=1.8721795996914676 (change=29.30457207514682 %)
[2025-10-12 16:09:04] 2025-10-12 20:08:07,430 | INFO     | sum of square deviations: 1778389984.324019
[2025-10-12 16:09:04] 2025-10-12 20:08:07,430 | INFO     | sum of deviations: 37345419603.46929
[2025-10-12 16:09:04] 2025-10-12 20:08:07,431 | INFO     | mean x: 1760293626.0614526
[2025-10-12 16:09:04] 2025-10-12 20:08:07,431 | INFO     | mean y: 2467840.5027932962
[2025-10-12 16:09:04] 2025-10-12 20:08:07,431 | INFO     | -- intersect: -36962936075.42475
[2025-10-12 16:09:04] 2025-10-12 20:08:07,431 | INFO     | intersect: -36962936075.42475
[2025-10-12 16:09:04] 2025-10-12 20:08:07,431 | INFO     | chi2: 1.8733536026355375
[2025-10-12 16:09:04] 2025-10-12 20:08:07,431 | INFO     | current chi2=1.8733536026355375 (change=-0.06270781629408625 %)
[2025-10-12 16:09:04] 2025-10-12 20:08:07,431 | INFO     | right removable region: 178
[2025-10-12 16:09:04] 2025-10-12 20:08:07,431 | INFO     | sum of square deviations: 1931610699.3423827
[2025-10-12 16:09:04] 2025-10-12 20:08:07,432 | INFO     | sum of deviations: -8176553342.499998
[2025-10-12 16:09:04] 2025-10-12 20:08:07,432 | INFO     | mean x: 1760294083.5597825
[2025-10-12 16:09:04] 2025-10-12 20:08:07,433 | INFO     | mean y: 2491001.5
[2025-10-12 16:09:04] 2025-10-12 20:08:07,433 | INFO     | -- intersect: 7453857095.927753
[2025-10-12 16:09:04] 2025-10-12 20:08:07,433 | INFO     | intersect: 7453857095.927753
[2025-10-12 16:09:04] 2025-10-12 20:08:07,433 | INFO     | chi2: 0.8750486009336176
[2025-10-12 16:09:04] 2025-10-12 20:08:07,433 | INFO     | current chi2=0.8750486009336176 (change=66.95726451231445 %)
[2025-10-12 16:09:04] 2025-10-12 20:08:07,433 | INFO     | sum of square deviations: 1778388031.4413378
[2025-10-12 16:09:04] 2025-10-12 20:08:07,434 | INFO     | sum of deviations: -11775378504.173187
[2025-10-12 16:09:04] 2025-10-12 20:08:07,434 | INFO     | mean x: 1760294236.055866
[2025-10-12 16:09:04] 2025-10-12 20:08:07,434 | INFO     | mean y: 2494535.1173184356
[2025-10-12 16:09:04] 2025-10-12 20:08:07,434 | INFO     | -- intersect: 11658067189.569221
[2025-10-12 16:09:04] 2025-10-12 20:08:07,434 | INFO     | intersect: 11658067189.569221
[2025-10-12 16:09:04] 2025-10-12 20:08:07,434 | INFO     | chi2: 0.8493743728632935
[2025-10-12 16:09:04] 2025-10-12 20:08:07,435 | INFO     | current chi2=0.8493743728632935 (change=2.934034525960202 %)
[2025-10-12 16:09:04] 2025-10-12 20:08:07,435 | INFO     | left removable region: 20
[2025-10-12 16:09:04] 2025-10-12 20:08:07,435 | INFO     | sum of square deviations: 1223027530.867092
[2025-10-12 16:09:04] 2025-10-12 20:08:07,435 | INFO     | sum of deviations: 4887739834.012657
[2025-10-12 16:09:04] 2025-10-12 20:08:07,436 | INFO     | mean x: 1760294205.563291
[2025-10-12 16:09:04] 2025-10-12 20:08:07,436 | INFO     | mean y: 2500705.898734177
[2025-10-12 16:09:04] 2025-10-12 20:08:07,436 | INFO     | -- intersect: -7032385992.042946
[2025-10-12 16:09:04] 2025-10-12 20:08:07,436 | INFO     | intersect: -7032385992.042946
[2025-10-12 16:09:04] 2025-10-12 20:08:07,436 | INFO     | chi2: 0.003044467722033858
[2025-10-12 16:09:04] 2025-10-12 20:08:07,436 | INFO     | -- intersect: -7032385992.042946
[2025-10-12 16:09:04] 2025-10-12 20:08:07,436 | INFO     | current memory leak: 4.00 B/s (using 158 data points, chi2=0.00)
[2025-10-12 16:09:04] 2025-10-12 20:08:07,437 | INFO     | could have reported an average CPU frequency of 2939 MHz (10 samples)
[2025-10-12 16:09:04] 2025-10-12 20:08:07,437 | INFO     | ..............................
[2025-10-12 16:09:04] 2025-10-12 20:08:07,437 | INFO     | . Timing measurements:
[2025-10-12 16:09:04] 2025-10-12 20:08:07,437 | INFO     | . get job = 0 s
[2025-10-12 16:09:04] 2025-10-12 20:08:07,437 | INFO     | . initial setup = 6 s
[2025-10-12 16:09:04] 2025-10-12 20:08:07,437 | INFO     | . payload setup = 19 s
[2025-10-12 16:09:04] 2025-10-12 20:08:07,437 | INFO     | . stage-in = 0 s
[2025-10-12 16:09:04] 2025-10-12 20:08:07,437 | INFO     | . payload execution = 11491 s
[2025-10-12 16:09:04] 2025-10-12 20:08:07,437 | INFO     | . stage-out = 2 s
[2025-10-12 16:09:04] 2025-10-12 20:08:07,438 | INFO     | . log creation = 0 s
[2025-10-12 16:09:04] 2025-10-12 20:08:07,438 | INFO     | ..............................
[2025-10-12 16:09:04] 2025-10-12 20:08:07,534 | INFO     | 
[2025-10-12 16:09:04] 2025-10-12 20:08:07,534 | INFO     | job summary report
[2025-10-12 16:09:04] 2025-10-12 20:08:07,534 | INFO     | --------------------------------------------------
[2025-10-12 16:09:04] 2025-10-12 20:08:07,535 | INFO     | PanDA job id: 6839821408
[2025-10-12 16:09:04] 2025-10-12 20:08:07,535 | INFO     | task id: 46676269
[2025-10-12 16:09:04] 2025-10-12 20:08:07,535 | INFO     | errors: (none)
[2025-10-12 16:09:04] 2025-10-12 20:08:07,535 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 16:09:04] 2025-10-12 20:08:07,535 | INFO     | pilot state: finished 
[2025-10-12 16:09:04] 2025-10-12 20:08:07,535 | INFO     | transexitcode: 0
[2025-10-12 16:09:04] 2025-10-12 20:08:07,535 | INFO     | exeerrorcode: 0
[2025-10-12 16:09:04] 2025-10-12 20:08:07,535 | INFO     | exeerrordiag: 
[2025-10-12 16:09:04] 2025-10-12 20:08:07,535 | INFO     | exitcode: 0
[2025-10-12 16:09:04] 2025-10-12 20:08:07,535 | INFO     | exitmsg: OK
[2025-10-12 16:09:04] 2025-10-12 20:08:07,535 | INFO     | cpuconsumptiontime: 36456 s
[2025-10-12 16:09:04] 2025-10-12 20:08:07,535 | INFO     | nevents: 400
[2025-10-12 16:09:04] 2025-10-12 20:08:07,535 | INFO     | neventsw: 0
[2025-10-12 16:09:04] 2025-10-12 20:08:07,535 | INFO     | pid: 2170320
[2025-10-12 16:09:04] 2025-10-12 20:08:07,536 | INFO     | pgrp: 2170320
[2025-10-12 16:09:04] 2025-10-12 20:08:07,536 | INFO     | corecount: 8
[2025-10-12 16:09:04] 2025-10-12 20:08:07,536 | INFO     | event service: False
[2025-10-12 16:09:04] 2025-10-12 20:08:07,536 | INFO     | sizes: {0: 2348686, 1: 2348885, 7: 2349147, 12: 2349175, 11514: 2378610, 11516: 2387608, 11517: 2387792, 11525: 2387986}
[2025-10-12 16:09:04] 2025-10-12 20:08:07,536 | INFO     | --------------------------------------------------
[2025-10-12 16:09:04] 2025-10-12 20:08:07,536 | INFO     | 
[2025-10-12 16:09:04] 2025-10-12 20:08:07,536 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 16:09:04] 2025-10-12 20:08:07,595 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 16:09:04] 2025-10-12 20:08:07,595 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 16:09:04] 2025-10-12 20:08:07,595 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 16:09:04] 2025-10-12 20:08:07,596 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 16:09:04] 2025-10-12 20:08:07,596 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 16:09:04] 2025-10-12 20:08:07,596 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 16:09:04] 2025-10-12 20:08:07,596 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 16:09:04] 2025-10-12 20:08:07,596 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 16:09:04] 2025-10-12 20:08:07,596 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 16:09:04] 2025-10-12 20:08:07,596 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 16:09:04] 2025-10-12 20:08:07,596 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 16:09:04] 2025-10-12 20:08:07,596 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 16:09:04] 2025-10-12 20:08:07,596 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 16:09:04] 2025-10-12 20:08:07,596 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 16:09:04] 2025-10-12 20:08:07,596 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 16:09:04] 2025-10-12 20:08:07,597 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 16:09:04] 2025-10-12 20:08:07,597 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 16:09:04] 2025-10-12 20:08:07,597 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 16:09:04] 2025-10-12 20:08:07,597 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 16:09:04] 2025-10-12 20:08:07,597 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 16:09:04] 2025-10-12 20:08:07,597 | INFO     | job 6839821408 has completed (purged errors)
[2025-10-12 16:09:04] 2025-10-12 20:08:07,597 | INFO     | overall cleanup function is called
[2025-10-12 16:09:04] 2025-10-12 20:08:08,606 | INFO     | --- collectZombieJob: --- 10, [2170320]
[2025-10-12 16:09:04] 2025-10-12 20:08:08,606 | INFO     | zombie collector waiting for pid 2170320
[2025-10-12 16:09:04] 2025-10-12 20:08:08,606 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 16:09:04] 2025-10-12 20:08:08,606 | INFO     | collected zombie processes
[2025-10-12 16:09:04] 2025-10-12 20:08:08,606 | INFO     | will attempt to kill all subprocesses of pid=2170320
[2025-10-12 16:09:04] 2025-10-12 20:08:09,072 | INFO     | process IDs to be killed: [2170320] (in reverse order)
[2025-10-12 16:09:04] 2025-10-12 20:08:09,226 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 16:09:04] 2025-10-12 20:08:09,226 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 16:09:04] 2025-10-12 20:08:09,243 | INFO     | did not find any defunct processes belonging to 2170320
[2025-10-12 16:09:04] 2025-10-12 20:08:09,259 | INFO     | did not find any defunct processes belonging to 2170320
[2025-10-12 16:09:04] 2025-10-12 20:08:09,259 | INFO     | ready for new job
[2025-10-12 16:09:04] 2025-10-12 20:08:09,259 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 16:09:04] 2025-10-12 20:08:09,261 | INFO     | ***************************************
[2025-10-12 16:09:04] 2025-10-12 20:08:09,262 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 16:09:04] 2025-10-12 20:08:09,262 | INFO     | ***************************************
[2025-10-12 16:09:04] 2025-10-12 20:08:09,262 | INFO     | 
[2025-10-12 16:09:04] 2025-10-12 20:08:09,267 | INFO     | architecture information:
[2025-10-12 16:09:04] 2025-10-12 20:08:09,267 | INFO     | executing command: cat /etc/os-release
[2025-10-12 16:09:04] 2025-10-12 20:08:09,290 | INFO     | cat /etc/os-release:
[2025-10-12 16:09:04] NAME="CentOS Linux"
[2025-10-12 16:09:04] VERSION="7 (Core)"
[2025-10-12 16:09:04] ID="centos"
[2025-10-12 16:09:04] ID_LIKE="rhel fedora"
[2025-10-12 16:09:04] VERSION_ID="7"
[2025-10-12 16:09:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 16:09:04] ANSI_COLOR="0;31"
[2025-10-12 16:09:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 16:09:04] HOME_URL="https://www.centos.org/"
[2025-10-12 16:09:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 16:09:04] 
[2025-10-12 16:09:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 16:09:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 16:09:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 16:09:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 16:09:04] 
[2025-10-12 16:09:04] 2025-10-12 20:08:09,290 | INFO     | ***************************************
[2025-10-12 16:09:04] 2025-10-12 20:08:09,793 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 16:09:04] 2025-10-12 20:08:09,813 | INFO     | sufficient remaining disk space (126999330816 B)
[2025-10-12 16:09:04] 2025-10-12 20:08:09,814 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 16:09:04] 2025-10-12 20:08:09,814 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 16:09:04] 2025-10-12 20:08:09,814 | INFO     | update_server=False
[2025-10-12 16:09:04] 2025-10-12 20:08:09,814 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 16:09:04] 2025-10-12 20:08:09,814 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:09:04] 2025-10-12 20:08:09,814 | INFO     | aborting loop
[2025-10-12 16:09:04] 2025-10-12 20:08:09,816 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 16:09:04] 2025-10-12 20:08:09,862 | INFO     | all data control threads have been joined
[2025-10-12 16:09:04] 2025-10-12 20:08:09,989 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 16:09:04] 2025-10-12 20:08:10,773 | INFO     | all payload control threads have been joined
[2025-10-12 16:09:04] 2025-10-12 20:08:10,819 | INFO     | [job] job monitor thread has finished
[2025-10-12 16:09:04] 2025-10-12 20:08:10,820 | INFO     | [job] retrieve thread has finished
[2025-10-12 16:09:04] 2025-10-12 20:08:10,867 | INFO     | [data] control thread has finished
[2025-10-12 16:09:04] 2025-10-12 20:08:10,887 | INFO     | all job control threads have been joined
[2025-10-12 16:09:04] 2025-10-12 20:08:10,920 | INFO     | [payload] validate_post thread has finished
[2025-10-12 16:09:04] 2025-10-12 20:08:11,264 | INFO     | [payload] failed_post thread has finished
[2025-10-12 16:09:04] 2025-10-12 20:08:11,438 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 16:09:04] 2025-10-12 20:08:11,545 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 16:09:04] 2025-10-12 20:08:11,695 | INFO     | [job] validate thread has finished
[2025-10-12 16:09:04] 2025-10-12 20:08:11,779 | INFO     | [payload] control thread has finished
[2025-10-12 16:09:04] 2025-10-12 20:08:11,823 | INFO     | [data] copytool_out thread has finished
[2025-10-12 16:09:04] 2025-10-12 20:08:11,896 | INFO     | [job] control thread has finished
[2025-10-12 16:09:04] 2025-10-12 20:08:12,041 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 16:09:04] 2025-10-12 20:08:12,091 | INFO     | [data] copytool_in thread has finished
[2025-10-12 16:09:04] 2025-10-12 20:08:12,546 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:09:04] 2025-10-12 20:08:13,552 | INFO     | [job] queue monitor thread has finished
[2025-10-12 16:09:04] 2025-10-12 20:08:14,012 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 16:09:04] 2025-10-12 20:08:20,761 | INFO     | job.realtimelogging is not enabled
[2025-10-12 16:09:04] 2025-10-12 20:08:21,767 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 16:09:04] 2025-10-12 20:08:40,230 | INFO     | PID=2162449 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 16:09:04] 2025-10-12 20:08:40,234 | INFO     | .. there are 16 such processes running
[2025-10-12 16:09:04] 2025-10-12 20:08:40,234 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 16:09:04] 2025-10-12 20:08:40,234 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 16:09:04] 2025-10-12 20:08:40,234 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 16:09:04] 2025-10-12 20:08:57,710 | INFO     | [monitor] cgroup control has ended
[2025-10-12 16:09:04] 2025-10-12 20:08:58,576 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140437530621760)>', '<ExcThread(monitor, started 140436890965760)>']
[2025-10-12 16:09:04] 2025-10-12 20:08:59,343 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 16:09:04] 2025-10-12 20:08:59,343 | INFO     | [monitor] control thread has ended
[2025-10-12 16:09:04] 2025-10-12 20:09:03,602 | INFO     | all workflow threads have been joined
[2025-10-12 16:09:04] 2025-10-12 20:09:03,602 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 16:09:04] 2025-10-12 20:09:03,602 | INFO     | traces error code: 0
[2025-10-12 16:09:04] 2025-10-12 20:09:03,603 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 16:09:04] 2025-10-12 20:09:03,856 [wrapper] ==== pilot stdout END ====
[2025-10-12 16:09:04] 2025-10-12 20:09:03,872 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 16:09:04] 2025-10-12 20:09:03,881 [wrapper] pilotpid: 2162449
[2025-10-12 16:09:04] 2025-10-12 20:09:03,897 [wrapper] Pilot exit status: 0
[2025-10-12 16:09:04] 2025-10-12 20:09:03,925 [wrapper] pandaids: 6839821408
[2025-10-12 16:09:04] 2025-10-12 20:09:04,035 [wrapper] cleanup supervisor_pilot 2542641 2162450
[2025-10-12 16:09:04] 2025-10-12 20:09:04,040 [wrapper] Test setup, not cleaning
[2025-10-12 16:09:04] 2025-10-12 20:09:04,045 [wrapper] apfmon messages muted
[2025-10-12 16:09:04] 2025-10-12 20:09:04,048 [wrapper] ==== wrapper stdout END ====
[2025-10-12 16:09:04] 2025-10-12 20:09:04,051 [wrapper] ==== wrapper stderr END ====
[2025-10-12 16:09:04]  *** Error codes and diagnostics ***
[2025-10-12 16:09:04]     "exeErrorCode": 0,
[2025-10-12 16:09:04]     "exeErrorDiag": "",
[2025-10-12 16:09:04]     "pilotErrorCode": 0,
[2025-10-12 16:09:04]     "pilotErrorDiag": "",
[2025-10-12 16:09:04]  *** Listing of results directory ***
[2025-10-12 16:09:04] total 407152
[2025-10-12 16:09:04] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 05:04 pilot3.tar.gz
[2025-10-12 16:09:04] -rwx------. 1 boincer umatlas     36292 Oct 12 05:11 runpilot2-wrapper.sh
[2025-10-12 16:09:04] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 05:11 queuedata.json
[2025-10-12 16:09:04] -rw-r--r--. 1 boincer umatlas       100 Oct 12 12:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 16:09:04] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 12:55 run_atlas
[2025-10-12 16:09:04] -rw-r--r--. 1 boincer umatlas       105 Oct 12 12:55 job.xml
[2025-10-12 16:09:04] -rw-r--r--. 2 boincer umatlas 220903686 Oct 12 12:55 EVNT.46676267._003564.pool.root.1
[2025-10-12 16:09:04] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 12:55 start_atlas.sh
[2025-10-12 16:09:04] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 12:55 shared
[2025-10-12 16:09:04] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 12:55 input.tar.gz
[2025-10-12 16:09:04] -rw-r--r--. 1 boincer umatlas         0 Oct 12 12:55 boinc_lockfile
[2025-10-12 16:09:04] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 12:55 pandaJob.out
[2025-10-12 16:09:04] -rw-------. 1 boincer umatlas    975528 Oct 12 12:55 agis_schedconf.cvmfs.json
[2025-10-12 16:09:04] drwx------. 5 boincer umatlas      4096 Oct 12 12:55 pilot3
[2025-10-12 16:09:04] -rw-r--r--. 1 boincer umatlas      6945 Oct 12 16:01 init_data.xml
[2025-10-12 16:09:04] -rw-------. 1 boincer umatlas 188134455 Oct 12 16:07 HITS.46676269._075096.pool.root.1
[2025-10-12 16:09:04] -rw-r--r--. 1 boincer umatlas       530 Oct 12 16:07 boinc_task_state.xml
[2025-10-12 16:09:04] -rw-------. 1 boincer umatlas        95 Oct 12 16:07 pilot_heartbeat.json
[2025-10-12 16:09:04] -rw-------. 1 boincer umatlas      1048 Oct 12 16:07 memory_monitor_summary.json
[2025-10-12 16:09:04] -rw-------. 1 boincer umatlas   1560580 Oct 12 16:07 agis_ddmendpoints.agis.ALL.json
[2025-10-12 16:09:04] -rw-------. 1 boincer umatlas    425699 Oct 12 16:07 log.46676269._075096.job.log.tgz.1
[2025-10-12 16:09:04] -rw-------. 1 boincer umatlas      7800 Oct 12 16:08 heartbeat.json
[2025-10-12 16:09:04] -rw-------. 1 boincer umatlas      4897 Oct 12 16:09 pilotlog.txt
[2025-10-12 16:09:04] -rw-r--r--. 1 boincer umatlas        28 Oct 12 16:09 wrapper_checkpoint.txt
[2025-10-12 16:09:04] -rw-------. 1 boincer umatlas   1565462 Oct 12 16:09 log.46676269._075096.job.log.1
[2025-10-12 16:09:04] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 16:09 boinc_mmap_file
[2025-10-12 16:09:04] -rw-------. 1 boincer umatlas       357 Oct 12 16:09 output.list
[2025-10-12 16:09:04] -rw-r--r--. 1 boincer umatlas       620 Oct 12 16:09 runtime_log
[2025-10-12 16:09:04] -rw-------. 1 boincer umatlas   2007040 Oct 12 16:09 result.tar.gz
[2025-10-12 16:09:04] -rw-r--r--. 1 boincer umatlas      8699 Oct 12 16:09 runtime_log.err
[2025-10-12 16:09:04] -rw-------. 1 boincer umatlas       658 Oct 12 16:09 r2QNDmJI7R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKJjNDmcd0YEm.diag
[2025-10-12 16:09:04] -rw-r--r--. 1 boincer umatlas     20969 Oct 12 16:09 stderr.txt
[2025-10-12 16:09:04] HITS file was successfully produced:
[2025-10-12 16:09:04] -rw-------. 1 boincer umatlas 188134455 Oct 12 16:07 shared/HITS.pool.root.1
[2025-10-12 16:09:04]  *** Contents of shared directory: ***
[2025-10-12 16:09:04] total 402000
[2025-10-12 16:09:04] -rw-r--r--. 2 boincer umatlas 220903686 Oct 12 12:55 ATLAS.root_0
[2025-10-12 16:09:04] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 12:55 start_atlas.sh
[2025-10-12 16:09:04] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 12:55 input.tar.gz
[2025-10-12 16:09:04] -rw-------. 1 boincer umatlas 188134455 Oct 12 16:07 HITS.pool.root.1
[2025-10-12 16:09:04] -rw-------. 1 boincer umatlas   2007040 Oct 12 16:09 result.tar.gz
16:09:05 (2158774): run_atlas exited; CPU time 36779.283771
16:09:05 (2158774): called boinc_finish(0)

</stderr_txt>
]]>

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