Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:28:46 (25638): wrapper (7.7.26015): starting
01:28:46 (25638): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 01:28:46] Arguments: --nthreads 8
[2025-10-13 01:28:46] Threads: 8
[2025-10-13 01:28:46] Checking for CVMFS
[2025-10-13 01:28:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 01:28:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 01:28:47] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 01:28:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 01:28:48] 2.11.2.0 20802 21399 83204 151641 0 60 22698406 25165824 4632 130560 0 5908035 99.852 3192731 1354 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-13 01:28:48] CVMFS is ok
[2025-10-13 01:28:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 01:28:48] Checking for apptainer binary...
[2025-10-13 01:28:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 01:28:48] Running /usr/bin/apptainer --version
[2025-10-13 01:28:48] apptainer version 1.3.2-1.el7
[2025-10-13 01:28:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 01:28:56] cg-vwn369.simple-grid.lan
[2025-10-13 01:28:56] apptainer works
[2025-10-13 01:28:56] Set ATHENA_PROC_NUMBER=8
[2025-10-13 01:28:56] Set ATHENA_CORE_NUMBER=8
[2025-10-13 01:28:56] Starting ATLAS job with PandaID=6839927852
[2025-10-13 01:28:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:53:04]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:53:04] 2025-10-13 03:52:17,612 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 05:53:04] 2025-10-13 03:52:17,613 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 05:53:04] 2025-10-13 03:52:17,618 | INFO     | fitting pss+swap vs Time
[2025-10-13 05:53:04] 2025-10-13 03:52:17,619 | INFO     | sum of square deviations: 4616114457.5
[2025-10-13 05:53:04] 2025-10-13 03:52:17,621 | INFO     | sum of deviations: 58572458335.000015
[2025-10-13 05:53:04] 2025-10-13 03:52:17,621 | INFO     | mean x: 1760319911.5
[2025-10-13 05:53:04] 2025-10-13 03:52:17,622 | INFO     | mean y: 2463397.2520325202
[2025-10-13 05:53:04] 2025-10-13 03:52:17,622 | INFO     | -- intersect: -22333695210.142
[2025-10-13 05:53:04] 2025-10-13 03:52:17,622 | INFO     | intersect: -22333695210.142
[2025-10-13 05:53:04] 2025-10-13 03:52:17,622 | INFO     | chi2: 6.029624244960138
[2025-10-13 05:53:04] 2025-10-13 03:52:17,623 | INFO     | sum of square deviations: 4340323240.0
[2025-10-13 05:53:04] 2025-10-13 03:52:17,625 | INFO     | sum of deviations: 73596980375.00002
[2025-10-13 05:53:04] 2025-10-13 03:52:17,625 | INFO     | mean x: 1760319759.0
[2025-10-13 05:53:04] 2025-10-13 03:52:17,626 | INFO     | mean y: 2471556.0331950206
[2025-10-13 05:53:04] 2025-10-13 03:52:17,626 | INFO     | -- intersect: -29846507792.529736
[2025-10-13 05:53:04] 2025-10-13 03:52:17,626 | INFO     | intersect: -29846507792.529736
[2025-10-13 05:53:04] 2025-10-13 03:52:17,626 | INFO     | chi2: 5.305703874513965
[2025-10-13 05:53:04] 2025-10-13 03:52:17,626 | INFO     | current chi2=5.305703874513965 (change=12.006061091638703 %)
[2025-10-13 05:53:04] 2025-10-13 03:52:17,627 | INFO     | right removable region: 240
[2025-10-13 05:53:04] 2025-10-13 03:52:17,627 | INFO     | sum of square deviations: 4340323240.0
[2025-10-13 05:53:04] 2025-10-13 03:52:17,629 | INFO     | sum of deviations: -23781434868.0
[2025-10-13 05:53:04] 2025-10-13 03:52:17,629 | INFO     | mean x: 1760320064.0
[2025-10-13 05:53:04] 2025-10-13 03:52:17,630 | INFO     | mean y: 2508890.8008298757
[2025-10-13 05:53:04] 2025-10-13 03:52:17,630 | INFO     | -- intersect: 9647628536.048632
[2025-10-13 05:53:04] 2025-10-13 03:52:17,630 | INFO     | intersect: 9647628536.048632
[2025-10-13 05:53:04] 2025-10-13 03:52:17,630 | INFO     | chi2: 1.668276973211767
[2025-10-13 05:53:04] 2025-10-13 03:52:17,630 | INFO     | current chi2=1.668276973211767 (change=72.33199109204531 %)
[2025-10-13 05:53:04] 2025-10-13 03:52:17,631 | INFO     | sum of square deviations: 4075741535.0
[2025-10-13 05:53:04] 2025-10-13 03:52:17,633 | INFO     | sum of deviations: -50470294191.99999
[2025-10-13 05:53:04] 2025-10-13 03:52:17,633 | INFO     | mean x: 1760320216.5
[2025-10-13 05:53:04] 2025-10-13 03:52:17,633 | INFO     | mean y: 2524142.5084745763
[2025-10-13 05:53:04] 2025-10-13 03:52:17,633 | INFO     | -- intersect: 21800736427.54733
[2025-10-13 05:53:04] 2025-10-13 03:52:17,633 | INFO     | intersect: 21800736427.54733
[2025-10-13 05:53:04] 2025-10-13 03:52:17,634 | INFO     | chi2: 0.968259009874184
[2025-10-13 05:53:04] 2025-10-13 03:52:17,634 | INFO     | current chi2=0.968259009874184 (change=41.960536204603265 %)
[2025-10-13 05:53:04] 2025-10-13 03:52:17,634 | INFO     | sum of square deviations: 3822136780.0
[2025-10-13 05:53:04] 2025-10-13 03:52:17,636 | INFO     | sum of deviations: -46219757096.0
[2025-10-13 05:53:04] 2025-10-13 03:52:17,637 | INFO     | mean x: 1760320369.0
[2025-10-13 05:53:04] 2025-10-13 03:52:17,637 | INFO     | mean y: 2521562.186147186
[2025-10-13 05:53:04] 2025-10-13 03:52:17,637 | INFO     | -- intersect: 21289457260.57868
[2025-10-13 05:53:04] 2025-10-13 03:52:17,637 | INFO     | intersect: 21289457260.57868
[2025-10-13 05:53:04] 2025-10-13 03:52:17,637 | INFO     | chi2: 0.9571129698451345
[2025-10-13 05:53:04] 2025-10-13 03:52:17,638 | INFO     | current chi2=0.9571129698451345 (change=1.1511424025372954 %)
[2025-10-13 05:53:04] 2025-10-13 03:52:17,638 | INFO     | left removable region: 30
[2025-10-13 05:53:04] 2025-10-13 03:52:17,638 | INFO     | sum of square deviations: 2871616632.5
[2025-10-13 05:53:04] 2025-10-13 03:52:17,640 | INFO     | sum of deviations: -6668969692.000001
[2025-10-13 05:53:04] 2025-10-13 03:52:17,640 | INFO     | mean x: 1760320643.5
[2025-10-13 05:53:04] 2025-10-13 03:52:17,640 | INFO     | mean y: 2515436.504761905
[2025-10-13 05:53:04] 2025-10-13 03:52:17,640 | INFO     | -- intersect: 4090639487.201295
[2025-10-13 05:53:04] 2025-10-13 03:52:17,640 | INFO     | intersect: 4090639487.201295
[2025-10-13 05:53:04] 2025-10-13 03:52:17,641 | INFO     | chi2: 0.0787729366439556
[2025-10-13 05:53:04] 2025-10-13 03:52:17,641 | INFO     | -- intersect: 4090639487.201295
[2025-10-13 05:53:04] 2025-10-13 03:52:17,641 | INFO     | current memory leak: -2.32 B/s (using 210 data points, chi2=0.08)
[2025-10-13 05:53:04] 2025-10-13 03:52:17,642 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-13 05:53:04] 2025-10-13 03:52:17,642 | INFO     | ..............................
[2025-10-13 05:53:04] 2025-10-13 03:52:17,642 | INFO     | . Timing measurements:
[2025-10-13 05:53:04] 2025-10-13 03:52:17,642 | INFO     | . get job = 0 s
[2025-10-13 05:53:04] 2025-10-13 03:52:17,642 | INFO     | . initial setup = 9 s
[2025-10-13 05:53:04] 2025-10-13 03:52:17,643 | INFO     | . payload setup = 138 s
[2025-10-13 05:53:04] 2025-10-13 03:52:17,643 | INFO     | . stage-in = 0 s
[2025-10-13 05:53:04] 2025-10-13 03:52:17,643 | INFO     | . payload execution = 15160 s
[2025-10-13 05:53:04] 2025-10-13 03:52:17,643 | INFO     | . stage-out = 3 s
[2025-10-13 05:53:04] 2025-10-13 03:52:17,643 | INFO     | . log creation = 1 s
[2025-10-13 05:53:04] 2025-10-13 03:52:17,643 | INFO     | ..............................
[2025-10-13 05:53:04] 2025-10-13 03:52:17,770 | INFO     | 
[2025-10-13 05:53:04] 2025-10-13 03:52:17,770 | INFO     | job summary report
[2025-10-13 05:53:04] 2025-10-13 03:52:17,770 | INFO     | --------------------------------------------------
[2025-10-13 05:53:04] 2025-10-13 03:52:17,770 | INFO     | PanDA job id: 6839927852
[2025-10-13 05:53:04] 2025-10-13 03:52:17,770 | INFO     | task id: 46676269
[2025-10-13 05:53:04] 2025-10-13 03:52:17,770 | INFO     | errors: (none)
[2025-10-13 05:53:04] 2025-10-13 03:52:17,771 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:53:04] 2025-10-13 03:52:17,771 | INFO     | pilot state: finished 
[2025-10-13 05:53:04] 2025-10-13 03:52:17,771 | INFO     | transexitcode: 0
[2025-10-13 05:53:04] 2025-10-13 03:52:17,771 | INFO     | exeerrorcode: 0
[2025-10-13 05:53:04] 2025-10-13 03:52:17,771 | INFO     | exeerrordiag: 
[2025-10-13 05:53:04] 2025-10-13 03:52:17,771 | INFO     | exitcode: 0
[2025-10-13 05:53:04] 2025-10-13 03:52:17,771 | INFO     | exitmsg: OK
[2025-10-13 05:53:04] 2025-10-13 03:52:17,771 | INFO     | cpuconsumptiontime: 57342 s
[2025-10-13 05:53:04] 2025-10-13 03:52:17,771 | INFO     | nevents: 400
[2025-10-13 05:53:04] 2025-10-13 03:52:17,771 | INFO     | neventsw: 0
[2025-10-13 05:53:04] 2025-10-13 03:52:17,771 | INFO     | pid: 3562
[2025-10-13 05:53:04] 2025-10-13 03:52:17,771 | INFO     | pgrp: 3562
[2025-10-13 05:53:04] 2025-10-13 03:52:17,772 | INFO     | corecount: 8
[2025-10-13 05:53:04] 2025-10-13 03:52:17,772 | INFO     | event service: False
[2025-10-13 05:53:04] 2025-10-13 03:52:17,772 | INFO     | sizes: {0: 2348529, 1: 2348784, 2: 2348784, 12: 2348812, 23: 2348840, 34: 2348868, 44: 2349024, 55: 2349052, 66: 2349080, 77: 2349108, 87: 2349164, 94: 2349734, 98
[2025-10-13 05:53:04] 2025-10-13 03:52:17,772 | INFO     | --------------------------------------------------
[2025-10-13 05:53:04] 2025-10-13 03:52:17,772 | INFO     | 
[2025-10-13 05:53:04] 2025-10-13 03:52:17,772 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-10-13 05:53:04] 2025-10-13 03:52:18,040 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:53:04] 2025-10-13 03:52:18,041 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:53:04] 2025-10-13 03:52:18,041 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:53:04] 2025-10-13 03:52:18,041 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:53:04] 2025-10-13 03:52:18,041 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:53:04] 2025-10-13 03:52:18,041 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:53:04] 2025-10-13 03:52:18,041 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:53:04] 2025-10-13 03:52:18,041 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:53:04] 2025-10-13 03:52:18,041 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:53:04] 2025-10-13 03:52:18,041 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:53:04] 2025-10-13 03:52:18,042 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:53:04] 2025-10-13 03:52:18,042 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:53:04] 2025-10-13 03:52:18,042 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:53:04] 2025-10-13 03:52:18,042 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:53:04] 2025-10-13 03:52:18,042 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:53:04] 2025-10-13 03:52:18,042 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:53:04] 2025-10-13 03:52:18,042 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:53:04] 2025-10-13 03:52:18,042 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:53:04] 2025-10-13 03:52:18,042 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:53:04] 2025-10-13 03:52:18,043 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:53:04] 2025-10-13 03:52:18,043 | INFO     | job 6839927852 has completed (purged errors)
[2025-10-13 05:53:04] 2025-10-13 03:52:18,043 | INFO     | overall cleanup function is called
[2025-10-13 05:53:04] 2025-10-13 03:52:19,053 | INFO     | --- collectZombieJob: --- 10, [3562]
[2025-10-13 05:53:04] 2025-10-13 03:52:19,053 | INFO     | zombie collector waiting for pid 3562
[2025-10-13 05:53:04] 2025-10-13 03:52:19,053 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:53:04] 2025-10-13 03:52:19,053 | INFO     | collected zombie processes
[2025-10-13 05:53:04] 2025-10-13 03:52:19,053 | INFO     | will attempt to kill all subprocesses of pid=3562
[2025-10-13 05:53:04] 2025-10-13 03:52:19,177 | INFO     | process IDs to be killed: [3562] (in reverse order)
[2025-10-13 05:53:04] 2025-10-13 03:52:20,000 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:53:04] 2025-10-13 03:52:20,001 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:53:04] 2025-10-13 03:52:20,004 | INFO     | did not find any defunct processes belonging to 3562
[2025-10-13 05:53:04] 2025-10-13 03:52:20,008 | INFO     | did not find any defunct processes belonging to 3562
[2025-10-13 05:53:04] 2025-10-13 03:52:20,008 | INFO     | ready for new job
[2025-10-13 05:53:04] 2025-10-13 03:52:20,008 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:53:04] 2025-10-13 03:52:20,011 | INFO     | ***************************************
[2025-10-13 05:53:04] 2025-10-13 03:52:20,011 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:53:04] 2025-10-13 03:52:20,011 | INFO     | ***************************************
[2025-10-13 05:53:04] 2025-10-13 03:52:20,011 | INFO     | 
[2025-10-13 05:53:04] 2025-10-13 03:52:20,012 | INFO     | pilot is running in a VM
[2025-10-13 05:53:04] 2025-10-13 03:52:20,012 | INFO     | architecture information:
[2025-10-13 05:53:04] 2025-10-13 03:52:20,016 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:53:04] 2025-10-13 03:52:20,261 | INFO     | cat /etc/os-release:
[2025-10-13 05:53:04] NAME="CentOS Linux"
[2025-10-13 05:53:04] VERSION="7 (Core)"
[2025-10-13 05:53:04] ID="centos"
[2025-10-13 05:53:04] ID_LIKE="rhel fedora"
[2025-10-13 05:53:04] VERSION_ID="7"
[2025-10-13 05:53:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:53:04] ANSI_COLOR="0;31"
[2025-10-13 05:53:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:53:04] HOME_URL="https://www.centos.org/"
[2025-10-13 05:53:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:53:04] 
[2025-10-13 05:53:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:53:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:53:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:53:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:53:04] 
[2025-10-13 05:53:04] 2025-10-13 03:52:20,262 | INFO     | ***************************************
[2025-10-13 05:53:04] 2025-10-13 03:52:20,765 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-10-13 05:53:04] 2025-10-13 03:52:21,062 | INFO     | sufficient remaining disk space (495285436416 B)
[2025-10-13 05:53:04] 2025-10-13 03:52:21,063 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:53:04] 2025-10-13 03:52:21,063 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:53:04] 2025-10-13 03:52:21,063 | INFO     | update_server=False
[2025-10-13 05:53:04] 2025-10-13 03:52:21,063 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:53:04] 2025-10-13 03:52:21,157 | INFO     | all job control threads have been joined
[2025-10-13 05:53:04] 2025-10-13 03:52:21,356 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:53:04] 2025-10-13 03:52:21,634 | INFO     | all data control threads have been joined
[2025-10-13 05:53:04] 2025-10-13 03:52:21,968 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:53:04] 2025-10-13 03:52:21,968 | INFO     | aborting loop
[2025-10-13 05:53:04] 2025-10-13 03:52:22,069 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:53:04] 2025-10-13 03:52:22,164 | INFO     | [job] control thread has finished
[2025-10-13 05:53:04] 2025-10-13 03:52:22,403 | INFO     | all payload control threads have been joined
[2025-10-13 05:53:04] 2025-10-13 03:52:22,539 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:53:04] 2025-10-13 03:52:22,539 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:53:04] 2025-10-13 03:52:22,621 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:53:04] 2025-10-13 03:52:22,640 | INFO     | [data] control thread has finished
[2025-10-13 05:53:04] 2025-10-13 03:52:22,790 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:53:04] 2025-10-13 03:52:22,974 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:53:04] 2025-10-13 03:52:23,102 | INFO     | [job] validate thread has finished
[2025-10-13 05:53:04] 2025-10-13 03:52:23,352 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:53:04] 2025-10-13 03:52:23,363 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:53:04] 2025-10-13 03:52:23,409 | INFO     | [payload] control thread has finished
[2025-10-13 05:53:04] 2025-10-13 03:52:23,508 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:53:04] 2025-10-13 03:52:23,509 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:53:04] 2025-10-13 03:52:23,541 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:53:04] 2025-10-13 03:52:23,796 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:53:04] 2025-10-13 03:52:23,906 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:53:04] 2025-10-13 03:52:27,915 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:53:04] 2025-10-13 03:52:49,770 | INFO     | PID=29412 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 05:53:04] 2025-10-13 03:52:49,770 | INFO     | .. there are 9 such processes running
[2025-10-13 05:53:04] 2025-10-13 03:52:49,772 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:53:04] 2025-10-13 03:52:49,772 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:53:04] 2025-10-13 03:52:49,772 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:53:04] 2025-10-13 03:52:51,723 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:53:04] 2025-10-13 03:52:53,520 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139946401822528)>', '<ExcThread(monitor, started 139946090272512)>']
[2025-10-13 05:53:04] 2025-10-13 03:52:53,796 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:53:04] 2025-10-13 03:52:53,797 | INFO     | [monitor] control thread has ended
[2025-10-13 05:53:04] 2025-10-13 03:52:58,546 | INFO     | all workflow threads have been joined
[2025-10-13 05:53:04] 2025-10-13 03:52:58,546 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:53:04] 2025-10-13 03:52:58,546 | INFO     | traces error code: 0
[2025-10-13 05:53:04] 2025-10-13 03:52:58,546 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:53:04] 2025-10-13 03:52:59,012 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:53:04] 2025-10-13 03:52:59,123 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:53:04] 2025-10-13 03:52:59,193 [wrapper] pilotpid: 29412
[2025-10-13 05:53:04] 2025-10-13 03:52:59,284 [wrapper] Pilot exit status: 0
[2025-10-13 05:53:04] 2025-10-13 03:52:59,800 [wrapper] pandaids: 6839927852
[2025-10-13 05:53:04] 2025-10-13 03:53:00,722 [wrapper] cleanup supervisor_pilot 30290 29413
[2025-10-13 05:53:04] 2025-10-13 03:53:00,803 [wrapper] Test setup, not cleaning
[2025-10-13 05:53:04] 2025-10-13 03:53:00,884 [wrapper] apfmon messages muted
[2025-10-13 05:53:04] 2025-10-13 03:53:00,958 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:53:04] 2025-10-13 03:53:01,005 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:53:04]  *** Error codes and diagnostics ***
[2025-10-13 05:53:04]     "exeErrorCode": 0,
[2025-10-13 05:53:04]     "exeErrorDiag": "",
[2025-10-13 05:53:04]     "pilotErrorCode": 0,
[2025-10-13 05:53:04]     "pilotErrorDiag": "",
[2025-10-13 05:53:04]  *** Listing of results directory ***
[2025-10-13 05:53:04] total 420728
[2025-10-13 05:53:04] -rw-r--r--. 1 boinc boinc    557409 Oct 12 13:23 pilot3.tar.gz
[2025-10-13 05:53:04] -rwx------. 1 boinc boinc     36292 Oct 12 13:50 runpilot2-wrapper.sh
[2025-10-13 05:53:04] -rw-r--r--. 1 boinc boinc      5112 Oct 12 13:50 queuedata.json
[2025-10-13 05:53:04] -rw-r--r--. 1 boinc boinc       100 Oct 13 01:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:53:04] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 01:28 run_atlas
[2025-10-13 05:53:04] -rw-r--r--. 1 boinc boinc       105 Oct 13 01:28 job.xml
[2025-10-13 05:53:04] -rw-r--r--. 2 boinc boinc 221462100 Oct 13 01:28 EVNT.46676267._001657.pool.root.1
[2025-10-13 05:53:04] -rw-r--r--. 2 boinc boinc     15120 Oct 13 01:28 start_atlas.sh
[2025-10-13 05:53:04] drwxrwx--x. 2 boinc boinc        68 Oct 13 01:28 shared
[2025-10-13 05:53:04] -rw-r--r--. 2 boinc boinc    569677 Oct 13 01:28 input.tar.gz
[2025-10-13 05:53:04] -rw-r--r--. 1 boinc boinc      6389 Oct 13 01:28 init_data.xml
[2025-10-13 05:53:04] -rw-r--r--. 1 boinc boinc         0 Oct 13 01:28 boinc_lockfile
[2025-10-13 05:53:04] -rw-r--r--. 1 boinc boinc      2549 Oct 13 01:28 pandaJob.out
[2025-10-13 05:53:04] -rw-------. 1 boinc boinc    975603 Oct 13 01:32 agis_schedconf.cvmfs.json
[2025-10-13 05:53:04] drwx------. 5 boinc boinc      4096 Oct 13 01:32 pilot3
[2025-10-13 05:53:04] -rw-------. 1 boinc boinc 200385544 Oct 13 05:49 HITS.46676269._077391.pool.root.1
[2025-10-13 05:53:04] -rw-r--r--. 1 boinc boinc       531 Oct 13 05:49 boinc_task_state.xml
[2025-10-13 05:53:04] -rw-------. 1 boinc boinc      1016 Oct 13 05:50 memory_monitor_summary.json
[2025-10-13 05:53:04] -rw-------. 1 boinc boinc   1560580 Oct 13 05:50 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:53:04] -rw-------. 1 boinc boinc    468335 Oct 13 05:50 log.46676269._077391.job.log.tgz.1
[2025-10-13 05:53:04] -rw-------. 1 boinc boinc      7783 Oct 13 05:52 heartbeat.json
[2025-10-13 05:53:04] -rw-r--r--. 1 boinc boinc        28 Oct 13 05:52 wrapper_checkpoint.txt
[2025-10-13 05:53:04] -rw-r--r--. 1 boinc boinc      8192 Oct 13 05:52 boinc_mmap_file
[2025-10-13 05:53:04] -rw-------. 1 boinc boinc        95 Oct 13 05:52 pilot_heartbeat.json
[2025-10-13 05:53:04] -rw-------. 1 boinc boinc      4884 Oct 13 05:52 pilotlog.txt
[2025-10-13 05:53:04] -rw-------. 1 boinc boinc   2077217 Oct 13 05:53 log.46676269._077391.job.log.1
[2025-10-13 05:53:04] -rw-------. 1 boinc boinc       357 Oct 13 05:53 output.list
[2025-10-13 05:53:04] -rw-r--r--. 1 boinc boinc       620 Oct 13 05:53 runtime_log
[2025-10-13 05:53:04] -rw-------. 1 boinc boinc   2560000 Oct 13 05:53 result.tar.gz
[2025-10-13 05:53:04] -rw-------. 1 boinc boinc       656 Oct 13 05:53 rv0LDm1l9R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4fjNDmwCh23m.diag
[2025-10-13 05:53:04] -rw-r--r--. 1 boinc boinc      8703 Oct 13 05:53 runtime_log.err
[2025-10-13 05:53:04] -rw-r--r--. 1 boinc boinc     20588 Oct 13 05:53 stderr.txt
[2025-10-13 05:53:04] HITS file was successfully produced:
[2025-10-13 05:53:04] -rw-------. 1 boinc boinc 200385544 Oct 13 05:49 shared/HITS.pool.root.1
[2025-10-13 05:53:04]  *** Contents of shared directory: ***
[2025-10-13 05:53:04] total 415040
[2025-10-13 05:53:04] -rw-r--r--. 2 boinc boinc 221462100 Oct 13 01:28 ATLAS.root_0
[2025-10-13 05:53:04] -rw-r--r--. 2 boinc boinc     15120 Oct 13 01:28 start_atlas.sh
[2025-10-13 05:53:04] -rw-r--r--. 2 boinc boinc    569677 Oct 13 01:28 input.tar.gz
[2025-10-13 05:53:04] -rw-------. 1 boinc boinc 200385544 Oct 13 05:49 HITS.pool.root.1
[2025-10-13 05:53:04] -rw-------. 1 boinc boinc   2560000 Oct 13 05:53 result.tar.gz
05:53:05 (25638): run_atlas exited; CPU time 57553.690499
05:53:05 (25638): called boinc_finish(0)

</stderr_txt>
]]>

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