Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:56:13 (12360): wrapper (7.7.26015): starting
10:56:13 (12360): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 10:56:13] Arguments: --nthreads 12
[2025-10-12 10:56:13] Threads: 12
[2025-10-12 10:56:13] Checking for CVMFS
[2025-10-12 10:56:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 10:56:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 10:56:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 10:56:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 10:56:14] 2.11.2.0 6893 52943 86808 151623 2 59 12509692 20275200 1 130560 0 29509155 99.956 2511727 27895 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 10:56:14] CVMFS is ok
[2025-10-12 10:56:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 10:56:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 10:56:14] Further information can be found at the LHC@home message board.
[2025-10-12 10:56:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 10:56:14] Checking for apptainer binary...
[2025-10-12 10:56:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 10:56:14] Running /usr/bin/apptainer --version
[2025-10-12 10:56:14] apptainer version 1.3.2-1.el7
[2025-10-12 10:56:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 10:56:15] c-205-3.aglt2.org
[2025-10-12 10:56:15] apptainer works
[2025-10-12 10:56:15] Set ATHENA_PROC_NUMBER=12
[2025-10-12 10:56:15] Set ATHENA_CORE_NUMBER=12
[2025-10-12 10:56:15] Starting ATLAS job with PandaID=6839870931
[2025-10-12 10:56:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 12:11:43]  *** The last 200 lines of the pilot log: ***
[2025-10-12 12:11:43]  status_code=0
[2025-10-12 12:11:43]  storage_token=
[2025-10-12 12:11:43]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6839870931/log.46676269._077168.job.log.tgz.1
[2025-10-12 12:11:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/aa/39/log.46676269._077168.job.log.tgz.1
[2025-10-12 12:11:43]  workdir=None
[2025-10-12 12:11:43] ]
[2025-10-12 12:11:43] 2025-10-12 16:10:34,534 | INFO     | transferring file log.46676269._077168.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6839870931/log.46676269._077168.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 12:11:43] 2025-10-12 16:10:34,535 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6839870931/log.46676269._077168.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._077168.job
[2025-10-12 12:11:43] 2025-10-12 16:10:34,556 | INFO     | adding to output.list: log.46676269._077168.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/aa/39/log.46676269._077168.job.log.tg
[2025-10-12 12:11:43] 2025-10-12 16:10:34,557 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 12:11:43] 2025-10-12 16:10:34,557 | INFO     | summary of transferred files:
[2025-10-12 12:11:43] 2025-10-12 16:10:34,558 | INFO     |  -- lfn=log.46676269._077168.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 12:11:43] 2025-10-12 16:10:34,558 | INFO     | stage-out finished correctly
[2025-10-12 12:11:43] 2025-10-12 16:10:35,121 | WARNING  | process 22413 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 12:11:43] 2025-10-12 16:10:35,122 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839870931/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 12:11:43] 2025-10-12 16:10:35,175 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 12:11:43] 2025-10-12 16:10:35,322 | INFO     | number of running child processes to parent process 22413: 1
[2025-10-12 12:11:43] 2025-10-12 16:10:35,322 | INFO     | maximum number of monitored processes: 6
[2025-10-12 12:11:43] 2025-10-12 16:10:36,197 | INFO     | time since job start (4446s) is within the limit (172800.0s)
[2025-10-12 12:11:43] 2025-10-12 16:10:37,472 | INFO     | job 6839870931 has state=finished
[2025-10-12 12:11:43] 2025-10-12 16:10:37,472 | INFO     | preparing for final server update for job 6839870931 in state='finished'
[2025-10-12 12:11:43] 2025-10-12 16:10:37,473 | INFO     | this job has now completed (state=finished)
[2025-10-12 12:11:43] 2025-10-12 16:10:37,473 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 12:11:43] 2025-10-12 16:10:37,473 | INFO     | log transfer has been attempted: DONE
[2025-10-12 12:11:43] 2025-10-12 16:10:37,473 | INFO     | job 6839870931 has finished - writing final server update
[2025-10-12 12:11:43] 2025-10-12 16:10:37,474 | INFO     | total number of processed events: 400 (read)
[2025-10-12 12:11:43] 2025-10-12 16:10:37,474 | INFO     | executing command: lscpu
[2025-10-12 12:11:43] 2025-10-12 16:10:37,497 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 12:11:43] 2025-10-12 16:10:37,825 | INFO     | monitor loop #331: job 0:6839870931 is in state 'finished'
[2025-10-12 12:11:43] 2025-10-12 16:10:37,827 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 12:11:43] 2025-10-12 16:10:38,204 | INFO     | time since job start (4448s) is within the limit (172800.0s)
[2025-10-12 12:11:43] 2025-10-12 16:10:40,209 | INFO     | time since job start (4450s) is within the limit (172800.0s)
[2025-10-12 12:11:43] 2025-10-12 16:10:40,331 | INFO     | monitor loop #332: job 0:6839870931 is in state 'finished'
[2025-10-12 12:11:43] 2025-10-12 16:10:40,331 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 12:11:43] 2025-10-12 16:10:42,215 | INFO     | time since job start (4452s) is within the limit (172800.0s)
[2025-10-12 12:11:43] 2025-10-12 16:10:42,272 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 12:11:43] 2025-10-12 16:10:42,277 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-10-12 12:11:43] 2025-10-12 16:10:42,280 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839870931/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 12:11:43] 2025-10-12 16:10:42,281 | INFO     | extracted standard info from prmon json
[2025-10-12 12:11:43] 2025-10-12 16:10:42,281 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 12:11:43] 2025-10-12 16:10:42,281 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 12:11:43] 2025-10-12 16:10:42,282 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 12:11:43] 2025-10-12 16:10:42,282 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 12:11:43] 2025-10-12 16:10:42,284 | INFO     | fitting pss+swap vs Time
[2025-10-12 12:11:43] 2025-10-12 16:10:42,284 | INFO     | sum of square deviations: 89127252.5
[2025-10-12 12:11:43] 2025-10-12 16:10:42,284 | INFO     | sum of deviations: -5232054302.000001
[2025-10-12 12:11:43] 2025-10-12 16:10:42,285 | INFO     | mean x: 1760283306.5
[2025-10-12 12:11:43] 2025-10-12 16:10:42,285 | INFO     | mean y: 2723776.9393939395
[2025-10-12 12:11:43] 2025-10-12 16:10:42,285 | INFO     | -- intersect: 103336974392.50853
[2025-10-12 12:11:43] 2025-10-12 16:10:42,285 | INFO     | intersect: 103336974392.50853
[2025-10-12 12:11:43] 2025-10-12 16:10:42,285 | INFO     | chi2: 0.0576335798718609
[2025-10-12 12:11:43] 2025-10-12 16:10:42,285 | INFO     | -- intersect: 103336974392.50853
[2025-10-12 12:11:43] 2025-10-12 16:10:42,285 | INFO     | current memory leak: -58.70 B/s (using 66 data points, chi2=0.06)
[2025-10-12 12:11:43] 2025-10-12 16:10:42,286 | INFO     | could have reported an average CPU frequency of 2045 MHz (6 samples)
[2025-10-12 12:11:43] 2025-10-12 16:10:42,286 | INFO     | ..............................
[2025-10-12 12:11:43] 2025-10-12 16:10:42,286 | INFO     | . Timing measurements:
[2025-10-12 12:11:43] 2025-10-12 16:10:42,286 | INFO     | . get job = 0 s
[2025-10-12 12:11:43] 2025-10-12 16:10:42,286 | INFO     | . initial setup = 2 s
[2025-10-12 12:11:43] 2025-10-12 16:10:42,286 | INFO     | . payload setup = 7 s
[2025-10-12 12:11:43] 2025-10-12 16:10:42,286 | INFO     | . stage-in = 0 s
[2025-10-12 12:11:43] 2025-10-12 16:10:42,287 | INFO     | . payload execution = 4415 s
[2025-10-12 12:11:43] 2025-10-12 16:10:42,287 | INFO     | . stage-out = 0 s
[2025-10-12 12:11:43] 2025-10-12 16:10:42,287 | INFO     | . log creation = 0 s
[2025-10-12 12:11:43] 2025-10-12 16:10:42,287 | INFO     | ..............................
[2025-10-12 12:11:43] 2025-10-12 16:10:42,373 | INFO     | 
[2025-10-12 12:11:43] 2025-10-12 16:10:42,373 | INFO     | job summary report
[2025-10-12 12:11:43] 2025-10-12 16:10:42,373 | INFO     | --------------------------------------------------
[2025-10-12 12:11:43] 2025-10-12 16:10:42,373 | INFO     | PanDA job id: 6839870931
[2025-10-12 12:11:43] 2025-10-12 16:10:42,373 | INFO     | task id: 46676269
[2025-10-12 12:11:43] 2025-10-12 16:10:42,374 | INFO     | errors: (none)
[2025-10-12 12:11:43] 2025-10-12 16:10:42,374 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 12:11:43] 2025-10-12 16:10:42,374 | INFO     | pilot state: finished 
[2025-10-12 12:11:43] 2025-10-12 16:10:42,374 | INFO     | transexitcode: 0
[2025-10-12 12:11:43] 2025-10-12 16:10:42,374 | INFO     | exeerrorcode: 0
[2025-10-12 12:11:43] 2025-10-12 16:10:42,374 | INFO     | exeerrordiag: 
[2025-10-12 12:11:43] 2025-10-12 16:10:42,374 | INFO     | exitcode: 0
[2025-10-12 12:11:43] 2025-10-12 16:10:42,374 | INFO     | exitmsg: OK
[2025-10-12 12:11:43] 2025-10-12 16:10:42,374 | INFO     | cpuconsumptiontime: 46668 s
[2025-10-12 12:11:43] 2025-10-12 16:10:42,375 | INFO     | nevents: 400
[2025-10-12 12:11:43] 2025-10-12 16:10:42,375 | INFO     | neventsw: 0
[2025-10-12 12:11:43] 2025-10-12 16:10:42,375 | INFO     | pid: 22413
[2025-10-12 12:11:43] 2025-10-12 16:10:42,375 | INFO     | pgrp: 22413
[2025-10-12 12:11:43] 2025-10-12 16:10:42,375 | INFO     | corecount: 12
[2025-10-12 12:11:43] 2025-10-12 16:10:42,375 | INFO     | event service: False
[2025-10-12 12:11:43] 2025-10-12 16:10:42,375 | INFO     | sizes: {0: 2348686, 1: 2348885, 5: 2349147, 11: 2349203, 4426: 2375280, 4427: 2375279, 4428: 2384517, 4435: 2384655}
[2025-10-12 12:11:43] 2025-10-12 16:10:42,375 | INFO     | --------------------------------------------------
[2025-10-12 12:11:43] 2025-10-12 16:10:42,375 | INFO     | 
[2025-10-12 12:11:43] 2025-10-12 16:10:42,376 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 12:11:43] 2025-10-12 16:10:42,399 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 12:11:43] 2025-10-12 16:10:42,399 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 12:11:43] 2025-10-12 16:10:42,400 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 12:11:43] 2025-10-12 16:10:42,400 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 12:11:43] 2025-10-12 16:10:42,400 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 12:11:43] 2025-10-12 16:10:42,400 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 12:11:43] 2025-10-12 16:10:42,400 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 12:11:43] 2025-10-12 16:10:42,400 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 12:11:43] 2025-10-12 16:10:42,401 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 12:11:43] 2025-10-12 16:10:42,401 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 12:11:43] 2025-10-12 16:10:42,401 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 12:11:43] 2025-10-12 16:10:42,401 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 12:11:43] 2025-10-12 16:10:42,401 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 12:11:43] 2025-10-12 16:10:42,401 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 12:11:43] 2025-10-12 16:10:42,402 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 12:11:43] 2025-10-12 16:10:42,402 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 12:11:43] 2025-10-12 16:10:42,402 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 12:11:43] 2025-10-12 16:10:42,402 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 12:11:43] 2025-10-12 16:10:42,402 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 12:11:43] 2025-10-12 16:10:42,403 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 12:11:43] 2025-10-12 16:10:42,403 | INFO     | job 6839870931 has completed (purged errors)
[2025-10-12 12:11:43] 2025-10-12 16:10:42,403 | INFO     | overall cleanup function is called
[2025-10-12 12:11:43] 2025-10-12 16:10:43,410 | INFO     | --- collectZombieJob: --- 10, [22413]
[2025-10-12 12:11:43] 2025-10-12 16:10:43,414 | INFO     | zombie collector waiting for pid 22413
[2025-10-12 12:11:43] 2025-10-12 16:10:43,414 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 12:11:43] 2025-10-12 16:10:43,414 | INFO     | collected zombie processes
[2025-10-12 12:11:43] 2025-10-12 16:10:43,414 | INFO     | will attempt to kill all subprocesses of pid=22413
[2025-10-12 12:11:43] 2025-10-12 16:10:43,509 | INFO     | process IDs to be killed: [22413] (in reverse order)
[2025-10-12 12:11:43] 2025-10-12 16:10:43,561 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 12:11:43] 2025-10-12 16:10:43,562 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 12:11:43] 2025-10-12 16:10:43,565 | INFO     | did not find any defunct processes belonging to 22413
[2025-10-12 12:11:43] 2025-10-12 16:10:43,568 | INFO     | did not find any defunct processes belonging to 22413
[2025-10-12 12:11:43] 2025-10-12 16:10:43,568 | INFO     | ready for new job
[2025-10-12 12:11:43] 2025-10-12 16:10:43,568 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 12:11:43] 2025-10-12 16:10:43,570 | INFO     | ***************************************
[2025-10-12 12:11:43] 2025-10-12 16:10:43,571 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 12:11:43] 2025-10-12 16:10:43,571 | INFO     | ***************************************
[2025-10-12 12:11:43] 2025-10-12 16:10:43,571 | INFO     | 
[2025-10-12 12:11:43] 2025-10-12 16:10:43,572 | INFO     | architecture information:
[2025-10-12 12:11:43] 2025-10-12 16:10:43,572 | INFO     | executing command: cat /etc/os-release
[2025-10-12 12:11:43] 2025-10-12 16:10:43,587 | INFO     | cat /etc/os-release:
[2025-10-12 12:11:43] NAME="CentOS Linux"
[2025-10-12 12:11:43] VERSION="7 (Core)"
[2025-10-12 12:11:43] ID="centos"
[2025-10-12 12:11:43] ID_LIKE="rhel fedora"
[2025-10-12 12:11:43] VERSION_ID="7"
[2025-10-12 12:11:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 12:11:43] ANSI_COLOR="0;31"
[2025-10-12 12:11:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 12:11:43] HOME_URL="https://www.centos.org/"
[2025-10-12 12:11:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 12:11:43] 
[2025-10-12 12:11:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 12:11:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 12:11:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 12:11:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 12:11:43] 
[2025-10-12 12:11:43] 2025-10-12 16:10:43,587 | INFO     | ***************************************
[2025-10-12 12:11:43] 2025-10-12 16:10:44,090 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 12:11:43] 2025-10-12 16:10:44,107 | INFO     | sufficient remaining disk space (29494345728 B)
[2025-10-12 12:11:43] 2025-10-12 16:10:44,107 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 12:11:43] 2025-10-12 16:10:44,107 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 12:11:43] 2025-10-12 16:10:44,108 | INFO     | update_server=False
[2025-10-12 12:11:43] 2025-10-12 16:10:44,108 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 12:11:43] 2025-10-12 16:10:44,108 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-12 12:11:43] 2025-10-12 16:10:44,108 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 12:11:43] 2025-10-12 16:10:44,109 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 12:11:43] 2025-10-12 16:10:44,109 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 12:11:43] 2025-10-12 16:10:44,109 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:11:43] 2025-10-12 16:10:44,109 | INFO     | aborting loop
[2025-10-12 12:11:43] 2025-10-12 16:10:44,109 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:11:43] 2025-10-12 16:10:44,593 | INFO     | all job control threads have been joined
[2025-10-12 12:11:43] 2025-10-12 16:10:45,048 | INFO     | all data control threads have been joined
[2025-10-12 12:11:43] 2025-10-12 16:10:45,085 | INFO     | all payload control threads have been joined
[2025-10-12 12:11:43] 2025-10-12 16:10:45,113 | INFO     | [job] retrieve thread has finished
[2025-10-12 12:11:43] 2025-10-12 16:10:45,115 | INFO     | [job] job monitor thread has finished
[2025-10-12 12:11:43] 2025-10-12 16:10:45,115 | INFO     | [job] queue monitor thread has finished
[2025-10-12 12:11:43] 2025-10-12 16:10:45,154 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 12:11:43] 2025-10-12 16:10:45,266 | INFO     | [payload] failed_post thread has finished
[2025-10-12 12:11:43] 2025-10-12 16:10:45,594 | INFO     | [job] control thread has finished
[2025-10-12 12:11:43] 2025-10-12 16:10:45,709 | INFO     | [job] validate thread has finished
[2025-10-12 12:11:43] 2025-10-12 16:10:45,780 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 12:11:43] 2025-10-12 16:10:45,843 | INFO     | [payload] validate_post thread has finished
[2025-10-12 12:11:43] 2025-10-12 16:10:45,865 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 12:11:43] 2025-10-12 16:10:46,030 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 12:11:43] 2025-10-12 16:10:46,053 | INFO     | [data] control thread has finished
[2025-10-12 12:11:43] 2025-10-12 16:10:46,090 | INFO     | [payload] control thread has finished
[2025-10-12 12:11:43] 2025-10-12 16:10:46,139 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 12:11:43] 2025-10-12 16:10:46,470 | INFO     | [data] copytool_in thread has finished
[2025-10-12 12:11:43] 2025-10-12 16:10:47,159 | INFO     | [data] copytool_out thread has finished
[2025-10-12 12:11:43] 2025-10-12 16:10:49,786 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 12:11:43] 2025-10-12 16:10:54,513 | INFO     | job.realtimelogging is not enabled
[2025-10-12 12:11:43] 2025-10-12 16:10:55,519 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 12:11:43] 2025-10-12 16:11:27,976 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-10-12 12:11:43] 2025-10-12 16:11:37,226 | INFO     | [monitor] cgroup control has ended
[2025-10-12 12:11:43] 2025-10-12 16:11:37,822 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139744201357120)>', '<ExcThread(monitor, started 139743287285504)>']
[2025-10-12 12:11:43] 2025-10-12 16:11:38,373 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 12:11:43] 2025-10-12 16:11:38,373 | INFO     | [monitor] control thread has ended
[2025-10-12 12:11:43] 2025-10-12 16:11:42,847 | INFO     | all workflow threads have been joined
[2025-10-12 12:11:43] 2025-10-12 16:11:42,847 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 12:11:43] 2025-10-12 16:11:42,848 | INFO     | traces error code: 0
[2025-10-12 12:11:43] 2025-10-12 16:11:42,848 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 12:11:43] 2025-10-12 16:11:42,950 [wrapper] ==== pilot stdout END ====
[2025-10-12 12:11:43] 2025-10-12 16:11:42,954 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 12:11:43] 2025-10-12 16:11:42,958 [wrapper] pilotpid: 16033
[2025-10-12 12:11:43] 2025-10-12 16:11:42,962 [wrapper] Pilot exit status: 0
[2025-10-12 12:11:43] 2025-10-12 16:11:42,978 [wrapper] pandaids: 6839870931
[2025-10-12 12:11:43] 2025-10-12 16:11:43,029 [wrapper] cleanup supervisor_pilot  3834 16034
[2025-10-12 12:11:43] 2025-10-12 16:11:43,033 [wrapper] Test setup, not cleaning
[2025-10-12 12:11:43] 2025-10-12 16:11:43,037 [wrapper] apfmon messages muted
[2025-10-12 12:11:43] 2025-10-12 16:11:43,041 [wrapper] ==== wrapper stdout END ====
[2025-10-12 12:11:43] 2025-10-12 16:11:43,045 [wrapper] ==== wrapper stderr END ====
[2025-10-12 12:11:43]  *** Error codes and diagnostics ***
[2025-10-12 12:11:43]     "exeErrorCode": 0,
[2025-10-12 12:11:43]     "exeErrorDiag": "",
[2025-10-12 12:11:43]     "pilotErrorCode": 0,
[2025-10-12 12:11:43]     "pilotErrorDiag": "",
[2025-10-12 12:11:43]  *** Listing of results directory ***
[2025-10-12 12:11:43] total 409092
[2025-10-12 12:11:43] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 07:23 pilot3.tar.gz
[2025-10-12 12:11:43] -rwx------ 1 boincer umatlas     36292 Oct 12 07:35 runpilot2-wrapper.sh
[2025-10-12 12:11:43] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 07:35 queuedata.json
[2025-10-12 12:11:43] -rw-r--r-- 1 boincer umatlas       100 Oct 12 10:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 12:11:43] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 10:56 run_atlas
[2025-10-12 12:11:43] -rw-r--r-- 1 boincer umatlas       105 Oct 12 10:56 job.xml
[2025-10-12 12:11:43] -rw-r--r-- 2 boincer umatlas 219522031 Oct 12 10:56 EVNT.46676267._003699.pool.root.1
[2025-10-12 12:11:43] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 10:56 start_atlas.sh
[2025-10-12 12:11:43] drwxrwx--x 2 boincer umatlas      4096 Oct 12 10:56 shared
[2025-10-12 12:11:43] -rw-r--r-- 2 boincer umatlas    569683 Oct 12 10:56 input.tar.gz
[2025-10-12 12:11:43] -rw-r--r-- 1 boincer umatlas         0 Oct 12 10:56 boinc_lockfile
[2025-10-12 12:11:43] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 10:56 pandaJob.out
[2025-10-12 12:11:43] -rw------- 1 boincer umatlas    975528 Oct 12 10:56 agis_schedconf.cvmfs.json
[2025-10-12 12:11:43] -rw------- 1 boincer umatlas   1560580 Oct 12 10:56 agis_ddmendpoints.agis.ALL.json
[2025-10-12 12:11:43] drwx------ 5 boincer umatlas      4096 Oct 12 10:56 pilot3
[2025-10-12 12:11:43] -rw------- 1 boincer umatlas 193451079 Oct 12 12:10 HITS.46676269._077168.pool.root.1
[2025-10-12 12:11:43] -rw-r--r-- 1 boincer umatlas       529 Oct 12 12:10 boinc_task_state.xml
[2025-10-12 12:11:43] -rw------- 1 boincer umatlas        95 Oct 12 12:10 pilot_heartbeat.json
[2025-10-12 12:11:43] -rw------- 1 boincer umatlas      1050 Oct 12 12:10 memory_monitor_summary.json
[2025-10-12 12:11:43] -rw------- 1 boincer umatlas    370253 Oct 12 12:10 log.46676269._077168.job.log.tgz.1
[2025-10-12 12:11:43] -rw------- 1 boincer umatlas      7855 Oct 12 12:10 heartbeat.json
[2025-10-12 12:11:43] -rw-r--r-- 1 boincer umatlas      5952 Oct 12 12:11 init_data.xml
[2025-10-12 12:11:43] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 12:11 boinc_mmap_file
[2025-10-12 12:11:43] -rw-r--r-- 1 boincer umatlas        27 Oct 12 12:11 wrapper_checkpoint.txt
[2025-10-12 12:11:43] -rw------- 1 boincer umatlas      4624 Oct 12 12:11 pilotlog.txt
[2025-10-12 12:11:43] -rw------- 1 boincer umatlas    646574 Oct 12 12:11 log.46676269._077168.job.log.1
[2025-10-12 12:11:43] -rw------- 1 boincer umatlas       357 Oct 12 12:11 output.list
[2025-10-12 12:11:43] -rw-r--r-- 1 boincer umatlas       620 Oct 12 12:11 runtime_log
[2025-10-12 12:11:43] -rw------- 1 boincer umatlas   1034240 Oct 12 12:11 result.tar.gz
[2025-10-12 12:11:43] -rw-r--r-- 1 boincer umatlas      8700 Oct 12 12:11 runtime_log.err
[2025-10-12 12:11:43] -rw------- 1 boincer umatlas       658 Oct 12 12:11 fhEMDmpX9R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmqlTMDmjAb0Ro.diag
[2025-10-12 12:11:43] -rw-r--r-- 1 boincer umatlas     21996 Oct 12 12:11 stderr.txt
[2025-10-12 12:11:43] HITS file was successfully produced:
[2025-10-12 12:11:43] -rw------- 1 boincer umatlas 193451079 Oct 12 12:10 shared/HITS.pool.root.1
[2025-10-12 12:11:43]  *** Contents of shared directory: ***
[2025-10-12 12:11:43] total 404892
[2025-10-12 12:11:43] -rw-r--r-- 2 boincer umatlas 219522031 Oct 12 10:56 ATLAS.root_0
[2025-10-12 12:11:43] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 10:56 start_atlas.sh
[2025-10-12 12:11:43] -rw-r--r-- 2 boincer umatlas    569683 Oct 12 10:56 input.tar.gz
[2025-10-12 12:11:43] -rw------- 1 boincer umatlas 193451079 Oct 12 12:10 HITS.pool.root.1
[2025-10-12 12:11:43] -rw------- 1 boincer umatlas   1034240 Oct 12 12:11 result.tar.gz
12:11:45 (12360): run_atlas exited; CPU time 46650.387226
12:11:45 (12360): called boinc_finish(0)

</stderr_txt>
]]>

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