Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:26:16 (688570): wrapper (7.7.26015): starting
20:26:16 (688570): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 20:26:16] Arguments: --nthreads 12
[2025-10-12 20:26:16] Threads: 12
[2025-10-12 20:26:16] Checking for CVMFS
[2025-10-12 20:26:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 20:26:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 20:26:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 20:26:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 20:26:17] 2.13.2.0 572020 279 55924 151631 1 57 2632982 4097024 0 130560 0 329867 99.988 15884 7097 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-10-12 20:26:17] CVMFS is ok
[2025-10-12 20:26:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 20:26:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 20:26:17] Further information can be found at the LHC@home message board.
[2025-10-12 20:26:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:26:17] Checking for apptainer binary...
[2025-10-12 20:26:17] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-10-12 20:26:17] apptainer is not installed, using version from CVMFS
[2025-10-12 20:26:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:26:17] pckelar8.cern.ch
[2025-10-12 20:26:17] apptainer works
[2025-10-12 20:26:17] Set ATHENA_PROC_NUMBER=12
[2025-10-12 20:26:17] Set ATHENA_CORE_NUMBER=12
[2025-10-12 20:26:17] Starting ATLAS job with PandaID=6839869976
[2025-10-12 20:26:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 21:33:37]  *** The last 200 lines of the pilot log: ***
[2025-10-12 21:33:37]  replicas=None
[2025-10-12 21:33:37]  scope=mc23_13p6TeV
[2025-10-12 21:33:37]  status=None
[2025-10-12 21:33:37]  status_code=0
[2025-10-12 21:33:37]  storage_token=
[2025-10-12 21:33:37]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6839869976/log.46676269._076950.job.log.tgz.1
[2025-10-12 21:33:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5a/97/log.46676269._076950.job.log.tgz.1
[2025-10-12 21:33:37]  workdir=None
[2025-10-12 21:33:37] ]
[2025-10-12 21:33:37] 2025-10-12 19:33:09,435 | INFO     | transferring file log.46676269._076950.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6839869976/log.46676269._076950.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-12 21:33:37] 2025-10-12 19:33:09,435 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6839869976/log.46676269._076950.job.log.tgz.1 /var/lib/boinc/slots/0/log.46676269._076950.job
[2025-10-12 21:33:37] 2025-10-12 19:33:09,448 | INFO     | adding to output.list: log.46676269._076950.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5a/97/log.46676269._076950.job.log.tg
[2025-10-12 21:33:37] 2025-10-12 19:33:09,449 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 21:33:37] 2025-10-12 19:33:09,449 | INFO     | summary of transferred files:
[2025-10-12 21:33:37] 2025-10-12 19:33:09,449 | INFO     |  -- lfn=log.46676269._076950.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 21:33:37] 2025-10-12 19:33:09,449 | INFO     | stage-out finished correctly
[2025-10-12 21:33:37] 2025-10-12 19:33:09,516 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 21:33:37] 2025-10-12 19:33:09,937 | INFO     | monitor loop #305: job 0:6839869976 is in state 'finished'
[2025-10-12 21:33:37] 2025-10-12 19:33:09,938 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:33:37] 2025-10-12 19:33:10,342 | INFO     | time since job start (4006s) is within the limit (172800.0s)
[2025-10-12 21:33:37] 2025-10-12 19:33:11,952 | INFO     | job 6839869976 has state=finished
[2025-10-12 21:33:37] 2025-10-12 19:33:11,952 | INFO     | preparing for final server update for job 6839869976 in state='finished'
[2025-10-12 21:33:37] 2025-10-12 19:33:11,952 | INFO     | this job has now completed (state=finished)
[2025-10-12 21:33:37] 2025-10-12 19:33:11,952 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 21:33:37] 2025-10-12 19:33:11,952 | INFO     | log transfer has been attempted: DONE
[2025-10-12 21:33:37] 2025-10-12 19:33:11,952 | INFO     | job 6839869976 has finished - writing final server update
[2025-10-12 21:33:37] 2025-10-12 19:33:11,953 | INFO     | total number of processed events: 400 (read)
[2025-10-12 21:33:37] 2025-10-12 19:33:11,954 | INFO     | executing command: lscpu
[2025-10-12 21:33:37] 2025-10-12 19:33:11,971 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 21:33:37] 2025-10-12 19:33:12,348 | INFO     | time since job start (4008s) is within the limit (172800.0s)
[2025-10-12 21:33:37] 2025-10-12 19:33:12,440 | INFO     | monitor loop #306: job 0:6839869976 is in state 'finished'
[2025-10-12 21:33:37] 2025-10-12 19:33:12,440 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:33:37] 2025-10-12 19:33:14,353 | INFO     | time since job start (4010s) is within the limit (172800.0s)
[2025-10-12 21:33:37] 2025-10-12 19:33:14,943 | INFO     | monitor loop #307: job 0:6839869976 is in state 'finished'
[2025-10-12 21:33:37] 2025-10-12 19:33:14,943 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:33:37] 2025-10-12 19:33:15,456 | INFO     | PID=692309 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 21:33:37] 2025-10-12 19:33:16,457 | INFO     | time since job start (4012s) is within the limit (172800.0s)
[2025-10-12 21:33:37] 2025-10-12 19:33:16,528 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 21:33:37] 2025-10-12 19:33:16,530 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 2210.6555833333337
[2025-10-12 21:33:37] 2025-10-12 19:33:16,532 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6839869976/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 21:33:37] 2025-10-12 19:33:16,532 | INFO     | extracted standard info from prmon json
[2025-10-12 21:33:37] 2025-10-12 19:33:16,532 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 21:33:37] 2025-10-12 19:33:16,533 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 21:33:37] 2025-10-12 19:33:16,533 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 21:33:37] 2025-10-12 19:33:16,533 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 21:33:37] 2025-10-12 19:33:16,534 | INFO     | fitting pss+swap vs Time
[2025-10-12 21:33:37] 2025-10-12 19:33:16,534 | INFO     | sum of square deviations: 63666310.0
[2025-10-12 21:33:37] 2025-10-12 19:33:16,535 | INFO     | sum of deviations: -4068014360.0
[2025-10-12 21:33:37] 2025-10-12 19:33:16,535 | INFO     | mean x: 1760295682.0
[2025-10-12 21:33:37] 2025-10-12 19:33:16,535 | INFO     | mean y: 2799552.084745763
[2025-10-12 21:33:37] 2025-10-12 19:33:16,535 | INFO     | -- intersect: 112478426178.19193
[2025-10-12 21:33:37] 2025-10-12 19:33:16,535 | INFO     | intersect: 112478426178.19193
[2025-10-12 21:33:37] 2025-10-12 19:33:16,535 | INFO     | chi2: 0.07925056339324969
[2025-10-12 21:33:37] 2025-10-12 19:33:16,535 | INFO     | -- intersect: 112478426178.19193
[2025-10-12 21:33:37] 2025-10-12 19:33:16,536 | INFO     | current memory leak: -63.90 B/s (using 59 data points, chi2=0.08)
[2025-10-12 21:33:37] 2025-10-12 19:33:16,536 | INFO     | could have reported an average CPU frequency of 2568 MHz (6 samples)
[2025-10-12 21:33:37] 2025-10-12 19:33:16,536 | INFO     | ..............................
[2025-10-12 21:33:37] 2025-10-12 19:33:16,536 | INFO     | . Timing measurements:
[2025-10-12 21:33:37] 2025-10-12 19:33:16,536 | INFO     | . get job = 0 s
[2025-10-12 21:33:37] 2025-10-12 19:33:16,536 | INFO     | . initial setup = 1 s
[2025-10-12 21:33:37] 2025-10-12 19:33:16,536 | INFO     | . payload setup = 6 s
[2025-10-12 21:33:37] 2025-10-12 19:33:16,536 | INFO     | . stage-in = 0 s
[2025-10-12 21:33:37] 2025-10-12 19:33:16,537 | INFO     | . payload execution = 3979 s
[2025-10-12 21:33:37] 2025-10-12 19:33:16,537 | INFO     | . stage-out = 0 s
[2025-10-12 21:33:37] 2025-10-12 19:33:16,537 | INFO     | . log creation = 0 s
[2025-10-12 21:33:37] 2025-10-12 19:33:16,537 | INFO     | ..............................
[2025-10-12 21:33:37] 2025-10-12 19:33:16,660 | INFO     | 
[2025-10-12 21:33:37] 2025-10-12 19:33:16,660 | INFO     | job summary report
[2025-10-12 21:33:37] 2025-10-12 19:33:16,661 | INFO     | --------------------------------------------------
[2025-10-12 21:33:37] 2025-10-12 19:33:16,661 | INFO     | PanDA job id: 6839869976
[2025-10-12 21:33:37] 2025-10-12 19:33:16,661 | INFO     | task id: 46676269
[2025-10-12 21:33:37] 2025-10-12 19:33:16,661 | INFO     | errors: (none)
[2025-10-12 21:33:37] 2025-10-12 19:33:16,661 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 21:33:37] 2025-10-12 19:33:16,661 | INFO     | pilot state: finished 
[2025-10-12 21:33:37] 2025-10-12 19:33:16,661 | INFO     | transexitcode: 0
[2025-10-12 21:33:37] 2025-10-12 19:33:16,661 | INFO     | exeerrorcode: 0
[2025-10-12 21:33:37] 2025-10-12 19:33:16,661 | INFO     | exeerrordiag: 
[2025-10-12 21:33:37] 2025-10-12 19:33:16,661 | INFO     | exitcode: 0
[2025-10-12 21:33:37] 2025-10-12 19:33:16,661 | INFO     | exitmsg: OK
[2025-10-12 21:33:37] 2025-10-12 19:33:16,662 | INFO     | cpuconsumptiontime: 43123 s
[2025-10-12 21:33:37] 2025-10-12 19:33:16,662 | INFO     | nevents: 400
[2025-10-12 21:33:37] 2025-10-12 19:33:16,662 | INFO     | neventsw: 0
[2025-10-12 21:33:37] 2025-10-12 19:33:16,662 | INFO     | pid: 699619
[2025-10-12 21:33:37] 2025-10-12 19:33:16,662 | INFO     | pgrp: 699619
[2025-10-12 21:33:37] 2025-10-12 19:33:16,662 | INFO     | corecount: 12
[2025-10-12 21:33:37] 2025-10-12 19:33:16,662 | INFO     | event service: False
[2025-10-12 21:33:37] 2025-10-12 19:33:16,662 | INFO     | sizes: {0: 2348685, 1: 2348884, 4: 2349146, 11: 2349174, 3989: 2375120, 3990: 2384302, 3997: 2384440}
[2025-10-12 21:33:37] 2025-10-12 19:33:16,662 | INFO     | --------------------------------------------------
[2025-10-12 21:33:37] 2025-10-12 19:33:16,662 | INFO     | 
[2025-10-12 21:33:37] 2025-10-12 19:33:16,662 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-12 21:33:37] 2025-10-12 19:33:16,681 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 21:33:37] 2025-10-12 19:33:16,681 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 21:33:37] 2025-10-12 19:33:16,681 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 21:33:37] 2025-10-12 19:33:16,681 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 21:33:37] 2025-10-12 19:33:16,681 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 21:33:37] 2025-10-12 19:33:16,682 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 21:33:37] 2025-10-12 19:33:16,682 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 21:33:37] 2025-10-12 19:33:16,682 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 21:33:37] 2025-10-12 19:33:16,682 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 21:33:37] 2025-10-12 19:33:16,682 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 21:33:37] 2025-10-12 19:33:16,682 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 21:33:37] 2025-10-12 19:33:16,682 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 21:33:37] 2025-10-12 19:33:16,682 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 21:33:37] 2025-10-12 19:33:16,682 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 21:33:37] 2025-10-12 19:33:16,682 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 21:33:37] 2025-10-12 19:33:16,683 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 21:33:37] 2025-10-12 19:33:16,683 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 21:33:37] 2025-10-12 19:33:16,683 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 21:33:37] 2025-10-12 19:33:16,683 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 21:33:37] 2025-10-12 19:33:16,683 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 21:33:37] 2025-10-12 19:33:16,683 | INFO     | job 6839869976 has completed (purged errors)
[2025-10-12 21:33:37] 2025-10-12 19:33:16,683 | INFO     | overall cleanup function is called
[2025-10-12 21:33:37] 2025-10-12 19:33:17,691 | INFO     | --- collectZombieJob: --- 10, [699619]
[2025-10-12 21:33:37] 2025-10-12 19:33:17,691 | INFO     | zombie collector waiting for pid 699619
[2025-10-12 21:33:37] 2025-10-12 19:33:17,691 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 21:33:37] 2025-10-12 19:33:17,691 | INFO     | collected zombie processes
[2025-10-12 21:33:37] 2025-10-12 19:33:17,691 | INFO     | will attempt to kill all subprocesses of pid=699619
[2025-10-12 21:33:37] 2025-10-12 19:33:17,765 | INFO     | process IDs to be killed: [699619] (in reverse order)
[2025-10-12 21:33:37] 2025-10-12 19:33:17,804 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 21:33:37] 2025-10-12 19:33:17,804 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 21:33:37] 2025-10-12 19:33:17,806 | INFO     | did not find any defunct processes belonging to 699619
[2025-10-12 21:33:37] 2025-10-12 19:33:17,808 | INFO     | did not find any defunct processes belonging to 699619
[2025-10-12 21:33:37] 2025-10-12 19:33:17,808 | INFO     | ready for new job
[2025-10-12 21:33:37] 2025-10-12 19:33:17,809 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 21:33:37] 2025-10-12 19:33:17,810 | INFO     | ***************************************
[2025-10-12 21:33:37] 2025-10-12 19:33:17,810 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 21:33:37] 2025-10-12 19:33:17,810 | INFO     | ***************************************
[2025-10-12 21:33:37] 2025-10-12 19:33:17,810 | INFO     | 
[2025-10-12 21:33:37] 2025-10-12 19:33:17,810 | INFO     | architecture information:
[2025-10-12 21:33:37] 2025-10-12 19:33:17,811 | INFO     | executing command: cat /etc/os-release
[2025-10-12 21:33:37] 2025-10-12 19:33:17,823 | INFO     | cat /etc/os-release:
[2025-10-12 21:33:37] NAME="CentOS Linux"
[2025-10-12 21:33:37] VERSION="7 (Core)"
[2025-10-12 21:33:37] ID="centos"
[2025-10-12 21:33:37] ID_LIKE="rhel fedora"
[2025-10-12 21:33:37] VERSION_ID="7"
[2025-10-12 21:33:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 21:33:37] ANSI_COLOR="0;31"
[2025-10-12 21:33:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 21:33:37] HOME_URL="https://www.centos.org/"
[2025-10-12 21:33:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 21:33:37] 
[2025-10-12 21:33:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 21:33:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 21:33:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 21:33:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 21:33:37] 
[2025-10-12 21:33:37] 2025-10-12 19:33:17,824 | INFO     | ***************************************
[2025-10-12 21:33:37] 2025-10-12 19:33:18,327 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-12 21:33:37] 2025-10-12 19:33:18,340 | INFO     | sufficient remaining disk space (1716713947136 B)
[2025-10-12 21:33:37] 2025-10-12 19:33:18,340 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 21:33:37] 2025-10-12 19:33:18,340 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 21:33:37] 2025-10-12 19:33:18,340 | INFO     | update_server=False
[2025-10-12 21:33:37] 2025-10-12 19:33:18,340 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 21:33:37] 2025-10-12 19:33:18,341 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-12 21:33:37] 2025-10-12 19:33:18,341 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 21:33:37] 2025-10-12 19:33:18,341 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:33:37] 2025-10-12 19:33:18,342 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 21:33:37] 2025-10-12 19:33:18,342 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 21:33:37] 2025-10-12 19:33:18,342 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 21:33:37] 2025-10-12 19:33:18,451 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:33:37] 2025-10-12 19:33:18,451 | INFO     | aborting loop
[2025-10-12 21:33:37] 2025-10-12 19:33:18,497 | INFO     | all payload control threads have been joined
[2025-10-12 21:33:37] 2025-10-12 19:33:18,810 | INFO     | all data control threads have been joined
[2025-10-12 21:33:37] 2025-10-12 19:33:19,106 | INFO     | all job control threads have been joined
[2025-10-12 21:33:37] 2025-10-12 19:33:19,346 | INFO     | [job] retrieve thread has finished
[2025-10-12 21:33:37] 2025-10-12 19:33:19,347 | INFO     | [job] queue monitor thread has finished
[2025-10-12 21:33:37] 2025-10-12 19:33:19,457 | INFO     | [job] job monitor thread has finished
[2025-10-12 21:33:37] 2025-10-12 19:33:19,478 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 21:33:37] 2025-10-12 19:33:19,502 | INFO     | [payload] control thread has finished
[2025-10-12 21:33:37] 2025-10-12 19:33:19,623 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 21:33:37] 2025-10-12 19:33:19,678 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 21:33:37] 2025-10-12 19:33:19,815 | INFO     | [data] control thread has finished
[2025-10-12 21:33:37] 2025-10-12 19:33:20,078 | INFO     | [data] copytool_in thread has finished
[2025-10-12 21:33:37] 2025-10-12 19:33:20,090 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 21:33:37] 2025-10-12 19:33:20,112 | INFO     | [job] control thread has finished
[2025-10-12 21:33:37] 2025-10-12 19:33:20,347 | INFO     | [data] copytool_out thread has finished
[2025-10-12 21:33:37] 2025-10-12 19:33:20,448 | INFO     | [payload] validate_post thread has finished
[2025-10-12 21:33:37] 2025-10-12 19:33:20,611 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 21:33:37] 2025-10-12 19:33:20,612 | INFO     | [payload] failed_post thread has finished
[2025-10-12 21:33:37] 2025-10-12 19:33:20,798 | INFO     | [job] validate thread has finished
[2025-10-12 21:33:37] 2025-10-12 19:33:24,096 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 21:33:37] 2025-10-12 19:33:30,244 | INFO     | [monitor] cgroup control has ended
[2025-10-12 21:33:37] 2025-10-12 19:33:32,351 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140033220044608)>', '<ExcThread(monitor, started 140032065120000)>']
[2025-10-12 21:33:37] 2025-10-12 19:33:32,414 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 21:33:37] 2025-10-12 19:33:32,414 | INFO     | [monitor] control thread has ended
[2025-10-12 21:33:37] 2025-10-12 19:33:37,377 | INFO     | all workflow threads have been joined
[2025-10-12 21:33:37] 2025-10-12 19:33:37,377 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 21:33:37] 2025-10-12 19:33:37,377 | INFO     | traces error code: 0
[2025-10-12 21:33:37] 2025-10-12 19:33:37,377 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 21:33:37] 2025-10-12 19:33:37,458 [wrapper] ==== pilot stdout END ====
[2025-10-12 21:33:37] 2025-10-12 19:33:37,461 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 21:33:37] 2025-10-12 19:33:37,463 [wrapper] pilotpid: 692309
[2025-10-12 21:33:37] 2025-10-12 19:33:37,466 [wrapper] Pilot exit status: 0
[2025-10-12 21:33:37] 2025-10-12 19:33:37,475 [wrapper] pandaids: 6839869976
[2025-10-12 21:33:37] 2025-10-12 19:33:37,494 [wrapper] cleanup supervisor_pilot  712041 692310
[2025-10-12 21:33:37] 2025-10-12 19:33:37,496 [wrapper] Test setup, not cleaning
[2025-10-12 21:33:37] 2025-10-12 19:33:37,498 [wrapper] apfmon messages muted
[2025-10-12 21:33:37] 2025-10-12 19:33:37,500 [wrapper] ==== wrapper stdout END ====
[2025-10-12 21:33:37] 2025-10-12 19:33:37,502 [wrapper] ==== wrapper stderr END ====
[2025-10-12 21:33:37]  *** Error codes and diagnostics ***
[2025-10-12 21:33:37]     "exeErrorCode": 0,
[2025-10-12 21:33:37]     "exeErrorDiag": "",
[2025-10-12 21:33:37]     "pilotErrorCode": 0,
[2025-10-12 21:33:37]     "pilotErrorDiag": "",
[2025-10-12 21:33:37]  *** Listing of results directory ***
[2025-10-12 21:33:37] total 409200
[2025-10-12 21:33:37] -rw-r--r-- 1 boinc boinc    557409 Oct 12 12:57 pilot3.tar.gz
[2025-10-12 21:33:37] -rw-r--r-- 1 boinc boinc      5112 Oct 12 13:15 queuedata.json
[2025-10-12 21:33:37] -rwx------ 1 boinc boinc     36292 Oct 12 13:15 runpilot2-wrapper.sh
[2025-10-12 21:33:37] -rw-r--r-- 1 boinc boinc       100 Oct 12 20:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 21:33:37] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 20:26 run_atlas
[2025-10-12 21:33:37] -rw-r--r-- 1 boinc boinc       105 Oct 12 20:26 job.xml
[2025-10-12 21:33:37] -rw-r--r-- 2 boinc boinc 218844203 Oct 12 20:26 EVNT.46676267._003671.pool.root.1
[2025-10-12 21:33:37] -rw-r--r-- 2 boinc boinc     15120 Oct 12 20:26 start_atlas.sh
[2025-10-12 21:33:37] drwxrwx--x 2 boinc boinc      4096 Oct 12 20:26 shared
[2025-10-12 21:33:37] -rw-r--r-- 2 boinc boinc    569680 Oct 12 20:26 input.tar.gz
[2025-10-12 21:33:37] -rw-r--r-- 1 boinc boinc      6251 Oct 12 20:26 init_data.xml
[2025-10-12 21:33:37] -rw-r--r-- 1 boinc boinc         0 Oct 12 20:26 boinc_lockfile
[2025-10-12 21:33:37] -rw-r--r-- 1 boinc boinc      2549 Oct 12 20:26 pandaJob.out
[2025-10-12 21:33:37] -rw------- 1 boinc boinc    975528 Oct 12 20:26 agis_schedconf.cvmfs.json
[2025-10-12 21:33:37] -rw------- 1 boinc boinc   1560580 Oct 12 20:26 agis_ddmendpoints.agis.ALL.json
[2025-10-12 21:33:37] drwx------ 5 boinc boinc      4096 Oct 12 20:26 pilot3
[2025-10-12 21:33:37] -rw------- 1 boinc boinc 194323142 Oct 12 21:32 HITS.46676269._076950.pool.root.1
[2025-10-12 21:33:37] -rw------- 1 boinc boinc        95 Oct 12 21:32 pilot_heartbeat.json
[2025-10-12 21:33:37] -rw-r--r-- 1 boinc boinc       529 Oct 12 21:32 boinc_task_state.xml
[2025-10-12 21:33:37] -rw------- 1 boinc boinc      1013 Oct 12 21:33 memory_monitor_summary.json
[2025-10-12 21:33:37] -rw------- 1 boinc boinc    374824 Oct 12 21:33 log.46676269._076950.job.log.tgz.1
[2025-10-12 21:33:37] -rw------- 1 boinc boinc      7786 Oct 12 21:33 heartbeat.json
[2025-10-12 21:33:37] -rw-r--r-- 1 boinc boinc      8192 Oct 12 21:33 boinc_mmap_file
[2025-10-12 21:33:37] -rw-r--r-- 1 boinc boinc        27 Oct 12 21:33 wrapper_checkpoint.txt
[2025-10-12 21:33:37] -rw------- 1 boinc boinc      4554 Oct 12 21:33 pilotlog.txt
[2025-10-12 21:33:37] -rw------- 1 boinc boinc    595769 Oct 12 21:33 log.46676269._076950.job.log.1
[2025-10-12 21:33:37] -rw------- 1 boinc boinc       357 Oct 12 21:33 output.list
[2025-10-12 21:33:37] -rw-r--r-- 1 boinc boinc       620 Oct 12 21:33 runtime_log
[2025-10-12 21:33:37] -rw------- 1 boinc boinc    993280 Oct 12 21:33 result.tar.gz
[2025-10-12 21:33:37] -rw-r--r-- 1 boinc boinc      8727 Oct 12 21:33 runtime_log.err
[2025-10-12 21:33:37] -rw------- 1 boinc boinc       657 Oct 12 21:33 eFyLDmmD9R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmyiTMDmvB7aen.diag
[2025-10-12 21:33:37] -rw-r--r-- 1 boinc boinc     21971 Oct 12 21:33 stderr.txt
[2025-10-12 21:33:37] HITS file was successfully produced:
[2025-10-12 21:33:37] -rw------- 1 boinc boinc 194323142 Oct 12 21:32 shared/HITS.pool.root.1
[2025-10-12 21:33:37]  *** Contents of shared directory: ***
[2025-10-12 21:33:37] total 405044
[2025-10-12 21:33:37] -rw-r--r-- 2 boinc boinc 218844203 Oct 12 20:26 ATLAS.root_0
[2025-10-12 21:33:37] -rw-r--r-- 2 boinc boinc     15120 Oct 12 20:26 start_atlas.sh
[2025-10-12 21:33:37] -rw-r--r-- 2 boinc boinc    569680 Oct 12 20:26 input.tar.gz
[2025-10-12 21:33:37] -rw------- 1 boinc boinc 194323142 Oct 12 21:32 HITS.pool.root.1
[2025-10-12 21:33:37] -rw------- 1 boinc boinc    993280 Oct 12 21:33 result.tar.gz
21:33:38 (688570): run_atlas exited; CPU time 43133.749110
21:33:38 (688570): called boinc_finish(0)

</stderr_txt>
]]>

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