Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:51:28 (3612088): wrapper (7.7.26015): starting
01:51:28 (3612088): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 01:51:28] Arguments: --nthreads 4
[2025-10-13 01:51:28] Threads: 4
[2025-10-13 01:51:28] Checking for CVMFS
[2025-10-13 01:51:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 01:51:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 01:51:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 01:51:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 01:51:28] 2.9.2.0 1879706 4928 96096 151641 0 57 22186876 36864000 0 130560 0 4324345 99.992 169519 874 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 01:51:28] CVMFS is ok
[2025-10-13 01:51:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 01:51:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 01:51:28] Further information can be found at the LHC@home message board.
[2025-10-13 01:51:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 01:51:28] Checking for apptainer binary...
[2025-10-13 01:51:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 01:51:28] Running /usr/bin/apptainer --version
[2025-10-13 01:51:28] apptainer version 1.4.1-1.1
[2025-10-13 01:51:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 01:51:28] thA317
[2025-10-13 01:51:28] apptainer works
[2025-10-13 01:51:28] Set ATHENA_PROC_NUMBER=4
[2025-10-13 01:51:28] Set ATHENA_CORE_NUMBER=4
[2025-10-13 01:51:28] Starting ATLAS job with PandaID=6839870962
[2025-10-13 01:51:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 03:05:09]  *** The last 200 lines of the pilot log: ***
[2025-10-13 03:05:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 03:05:09] ANSI_COLOR="0;31"
[2025-10-13 03:05:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 03:05:09] HOME_URL="https://www.centos.org/"
[2025-10-13 03:05:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 03:05:09] 
[2025-10-13 03:05:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 03:05:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 03:05:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 03:05:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 03:05:09] 
[2025-10-13 03:05:09] 2025-10-13 01:04:38,504 | INFO     | ***************************************
[2025-10-13 03:05:09] 2025-10-13 01:04:39,007 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 03:05:09] 2025-10-13 01:04:39,026 | INFO     | sufficient remaining disk space (237521338368 B)
[2025-10-13 03:05:09] 2025-10-13 01:04:39,027 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 03:05:09] 2025-10-13 01:04:39,027 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 03:05:09] 2025-10-13 01:04:39,027 | INFO     | update_server=False
[2025-10-13 03:05:09] 2025-10-13 01:04:39,027 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 03:05:09] 2025-10-13 01:04:39,027 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:05:09] 2025-10-13 01:04:39,027 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 03:05:09] 2025-10-13 01:04:39,564 | INFO     | all data control threads have been joined
[2025-10-13 03:05:09] 2025-10-13 01:04:39,619 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:05:09] 2025-10-13 01:04:39,619 | INFO     | aborting loop
[2025-10-13 03:05:09] 2025-10-13 01:04:40,032 | INFO     | [job] retrieve thread has finished
[2025-10-13 03:05:09] 2025-10-13 01:04:40,033 | INFO     | [job] queue monitor thread has finished
[2025-10-13 03:05:09] 2025-10-13 01:04:40,186 | INFO     | [payload] validate_post thread has finished
[2025-10-13 03:05:09] 2025-10-13 01:04:40,257 | INFO     | [data] copytool_in thread has finished
[2025-10-13 03:05:09] 2025-10-13 01:04:40,291 | INFO     | [payload] failed_post thread has finished
[2025-10-13 03:05:09] 2025-10-13 01:04:40,535 | INFO     | all payload control threads have been joined
[2025-10-13 03:05:09] 2025-10-13 01:04:40,570 | INFO     | [data] control thread has finished
[2025-10-13 03:05:09] 2025-10-13 01:04:40,605 | INFO     | all job control threads have been joined
[2025-10-13 03:05:09] 2025-10-13 01:04:40,624 | INFO     | [job] job monitor thread has finished
[2025-10-13 03:05:09] 2025-10-13 01:04:40,849 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 03:05:09] 2025-10-13 01:04:41,027 | INFO     | [job] validate thread has finished
[2025-10-13 03:05:09] 2025-10-13 01:04:41,033 | INFO     | [data] copytool_out thread has finished
[2025-10-13 03:05:09] 2025-10-13 01:04:41,122 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 03:05:09] 2025-10-13 01:04:41,127 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 03:05:09] 2025-10-13 01:04:41,196 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 03:05:09] 2025-10-13 01:04:41,460 | INFO     | [monitor] cgroup control has ended
[2025-10-13 03:05:09] 2025-10-13 01:04:41,540 | INFO     | [payload] control thread has finished
[2025-10-13 03:05:09] 2025-10-13 01:04:41,611 | INFO     | [job] control thread has finished
[2025-10-13 03:05:09] 2025-10-13 01:04:41,643 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 03:05:09] 2025-10-13 01:04:45,650 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 03:05:09] 2025-10-13 01:04:45,723 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140122511345472)>', '<ExcThread(monitor, started 140121428981504)>']
[2025-10-13 03:05:09] 2025-10-13 01:04:50,749 | INFO     | all workflow threads have been joined
[2025-10-13 03:05:09] 2025-10-13 01:04:50,749 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 03:05:09] 2025-10-13 01:04:50,749 | INFO     | traces error code: 0
[2025-10-13 03:05:09] 2025-10-13 01:04:50,749 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 03:05:09] 2025-10-13 01:05:09,227 | INFO     | PID=3615871 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 03:05:09] 2025-10-13 01:05:09,228 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 03:05:09] 2025-10-13 01:05:09,228 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 03:05:09] 2025-10-13 01:05:09,228 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 03:05:09] 2025-10-13 01:05:09,228 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 03:05:09] 2025-10-13 01:05:09,228 | INFO     | [monitor] control thread has ended
[2025-10-13 03:05:09] 2025-10-13 01:05:09,306 [wrapper] ==== pilot stdout END ====
[2025-10-13 03:05:09] 2025-10-13 01:05:09,310 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 03:05:09] 2025-10-13 01:05:09,315 [wrapper] pilotpid: 3615871
[2025-10-13 03:05:09] 2025-10-13 01:05:09,319 [wrapper] Pilot exit status: 0
[2025-10-13 03:05:09] 2025-10-13 01:05:09,331 [wrapper] pandaids: 6839870962
[2025-10-13 03:05:09] 2025-10-13 01:05:09,355 [wrapper] cleanup supervisor_pilot 3632140 3615872
[2025-10-13 03:05:09] 2025-10-13 01:05:09,359 [wrapper] Test setup, not cleaning
[2025-10-13 03:05:09] 2025-10-13 01:05:09,363 [wrapper] apfmon messages muted
[2025-10-13 03:05:09] 2025-10-13 01:05:09,367 [wrapper] ==== wrapper stdout END ====
[2025-10-13 03:05:09] 2025-10-13 01:05:09,371 [wrapper] ==== wrapper stderr END ====
[2025-10-13 03:05:09]  *** Error codes and diagnostics ***
[2025-10-13 03:05:09]     "exeErrorCode": 0,
[2025-10-13 03:05:09]     "exeErrorDiag": "",
[2025-10-13 03:05:09]     "pilotErrorCode": 0,
[2025-10-13 03:05:09]     "pilotErrorDiag": "",
[2025-10-13 03:05:09]  *** Listing of results directory ***
[2025-10-13 03:05:09] total 408112
[2025-10-13 03:05:09] -rw-r--r-- 1 boinc boinc    557409 Oct 12 13:23 pilot3.tar.gz
[2025-10-13 03:05:09] -rw-r--r-- 1 boinc boinc      5112 Oct 12 13:36 queuedata.json
[2025-10-13 03:05:09] -rwx------ 1 boinc boinc     36292 Oct 12 13:36 runpilot2-wrapper.sh
[2025-10-13 03:05:09] -rw-r--r-- 1 boinc boinc       100 Oct 13 01:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 03:05:09] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 01:51 run_atlas
[2025-10-13 03:05:09] -rw-r--r-- 1 boinc boinc       105 Oct 13 01:51 job.xml
[2025-10-13 03:05:09] -rw-r--r-- 2 boinc boinc 220183312 Oct 13 01:51 EVNT.46676267._003700.pool.root.1
[2025-10-13 03:05:09] -rw-r--r-- 2 boinc boinc    569679 Oct 13 01:51 input.tar.gz
[2025-10-13 03:05:09] -rw-r--r-- 2 boinc boinc     15120 Oct 13 01:51 start_atlas.sh
[2025-10-13 03:05:09] drwxrwx--x 2 boinc boinc      4096 Oct 13 01:51 shared
[2025-10-13 03:05:09] -rw-r--r-- 1 boinc boinc         0 Oct 13 01:51 boinc_setup_complete
[2025-10-13 03:05:09] -rw-r--r-- 1 boinc boinc      6377 Oct 13 01:51 init_data.xml
[2025-10-13 03:05:09] -rw-r--r-- 1 boinc boinc         0 Oct 13 01:51 boinc_lockfile
[2025-10-13 03:05:09] -rw-r--r-- 1 boinc boinc      2550 Oct 13 01:51 pandaJob.out
[2025-10-13 03:05:09] -rw------- 1 boinc boinc    975603 Oct 13 01:51 agis_schedconf.cvmfs.json
[2025-10-13 03:05:09] -rw------- 1 boinc boinc   1560580 Oct 13 01:51 agis_ddmendpoints.agis.ALL.json
[2025-10-13 03:05:09] drwx------ 5 boinc boinc      4096 Oct 13 01:51 pilot3
[2025-10-13 03:05:09] -rw------- 1 boinc boinc 192027392 Oct 13 03:04 HITS.46676269._077199.pool.root.1
[2025-10-13 03:05:09] -rw-r--r-- 1 boinc boinc       529 Oct 13 03:04 boinc_task_state.xml
[2025-10-13 03:05:09] -rw------- 1 boinc boinc      1024 Oct 13 03:04 memory_monitor_summary.json
[2025-10-13 03:05:09] -rw------- 1 boinc boinc    256656 Oct 13 03:04 log.46676269._077199.job.log.tgz.1
[2025-10-13 03:05:09] -rw------- 1 boinc boinc      7767 Oct 13 03:04 heartbeat.json
[2025-10-13 03:05:09] -rw-r--r-- 1 boinc boinc      8192 Oct 13 03:04 boinc_mmap_file
[2025-10-13 03:05:09] -rw-r--r-- 1 boinc boinc        27 Oct 13 03:04 wrapper_checkpoint.txt
[2025-10-13 03:05:09] -rw------- 1 boinc boinc       747 Oct 13 03:05 pilotlog.txt
[2025-10-13 03:05:09] -rw------- 1 boinc boinc        95 Oct 13 03:05 pilot_heartbeat.json
[2025-10-13 03:05:09] -rw------- 1 boinc boinc    649305 Oct 13 03:05 log.46676269._077199.job.log.1
[2025-10-13 03:05:09] -rw------- 1 boinc boinc       357 Oct 13 03:05 output.list
[2025-10-13 03:05:09] -rw-r--r-- 1 boinc boinc       620 Oct 13 03:05 runtime_log
[2025-10-13 03:05:09] -rw------- 1 boinc boinc    921600 Oct 13 03:05 result.tar.gz
[2025-10-13 03:05:09] -rw-r--r-- 1 boinc boinc      8777 Oct 13 03:05 runtime_log.err
[2025-10-13 03:05:09] -rw------- 1 boinc boinc       658 Oct 13 03:05 oc1LDm9X9R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9djNDmQ7d4Wn.diag
[2025-10-13 03:05:09] -rw-r--r-- 1 boinc boinc      8508 Oct 13 03:05 stderr.txt
[2025-10-13 03:05:09] HITS file was successfully produced:
[2025-10-13 03:05:09] -rw------- 1 boinc boinc 192027392 Oct 13 03:04 shared/HITS.pool.root.1
[2025-10-13 03:05:09]  *** Contents of shared directory: ***
[2025-10-13 03:05:09] total 404036
[2025-10-13 03:05:09] -rw-r--r-- 2 boinc boinc 220183312 Oct 13 01:51 ATLAS.root_0
[2025-10-13 03:05:09] -rw-r--r-- 2 boinc boinc    569679 Oct 13 01:51 input.tar.gz
[2025-10-13 03:05:09] -rw-r--r-- 2 boinc boinc     15120 Oct 13 01:51 start_atlas.sh
[2025-10-13 03:05:09] -rw------- 1 boinc boinc 192027392 Oct 13 03:04 HITS.pool.root.1
[2025-10-13 03:05:09] -rw------- 1 boinc boinc    921600 Oct 13 03:05 result.tar.gz
03:05:11 (3612088): run_atlas exited; CPU time 16386.291350
03:05:11 (3612088): called boinc_finish(0)

</stderr_txt>
]]>

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